Protein of unknown function (DUF295)
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| zf-RVT | PF13966 | 110 - 174 | 3e-09 | zinc-binding in reverse transcriptase |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 311 |
| AclWI | GGATC | 2 cut(s) | 320, 479 |
| AcsI | RAATTY | 2 cut(s) | 43, 177 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 376 |
| AflIII | ACRYGT | 1 cut(s) | 493 |
| AgsI | TTSAA | 4 cut(s) | 75, 452, 482, 583 |
| AjnI | CCWGG | 1 cut(s) | 370 |
| AluBI | AGCT | 4 cut(s) | 85, 134, 186, 433 |
| AluI | AGCT | 4 cut(s) | 85, 134, 186, 433 |
| Alw26I | GTCTC | 1 cut(s) | 450 |
| AlwI | GGATC | 2 cut(s) | 320, 479 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 58 |
| Ama87I | CYCGRG | 1 cut(s) | 279 |
| ApeKI | GCWGC | 1 cut(s) | 415 |
| ApoI | RAATTY | 2 cut(s) | 43, 177 |
| AspS9I | GGNCC | 1 cut(s) | 367 |
| AvaI | CYCGRG | 1 cut(s) | 279 |
| AvaII | GGWCC | 1 cut(s) | 367 |
| BbsI | GAAGAC | 1 cut(s) | 208 |
| BbvI | GCAGC | 1 cut(s) | 402 |
| BciT130I | CCWGG | 1 cut(s) | 372 |
| BcoDI | GTCTC | 1 cut(s) | 450 |
| BfaI | CTAG | 2 cut(s) | 86, 161 |
| BglII | AGATCT | 1 cut(s) | 384 |
| BisI | GCNGC | 1 cut(s) | 416 |
| BlsI | GCNGC | 1 cut(s) | 417 |
| Bme1390I | CCNGG | 1 cut(s) | 372 |
| Bme18I | GGWCC | 1 cut(s) | 367 |
| BmeT110I | CYCGRG | 1 cut(s) | 279 |
| BmgT120I | GGNCC | 1 cut(s) | 367 |
| BmiI | GGNNCC | 1 cut(s) | 369 |
| BmrFI | CCNGG | 1 cut(s) | 372 |
| BpiI | GAAGAC | 1 cut(s) | 208 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 175, 207 |
| BsaJI | CCNNGG | 2 cut(s) | 370, 371 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 376 |
| Bse3DI | GCAATG | 1 cut(s) | 412 |
| BseBI | CCWGG | 1 cut(s) | 372 |
| BseDI | CCNNGG | 2 cut(s) | 370, 371 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 376 |
| BseMI | GCAATG | 1 cut(s) | 412 |
| BseRI | GAGGAG | 1 cut(s) | 528 |
| BseXI | GCAGC | 1 cut(s) | 402 |
| BsgI | GTGCAG | 1 cut(s) | 401 |
| BsiHKCI | CYCGRG | 1 cut(s) | 279 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 376 |
| BsmAI | GTCTC | 1 cut(s) | 450 |
| BsoBI | CYCGRG | 1 cut(s) | 279 |
| Bsp143I | GATC | 3 cut(s) | 325, 384, 484 |
| BspLI | GGNNCC | 1 cut(s) | 369 |
| BspPI | GGATC | 2 cut(s) | 320, 479 |
| BsrDI | GCAATG | 1 cut(s) | 412 |
| BssECI | CCNNGG | 2 cut(s) | 370, 371 |
| BssMI | GATC | 3 cut(s) | 325, 384, 484 |
| Bst2UI | CCWGG | 1 cut(s) | 372 |
| BstC8I | GCNNGC | 2 cut(s) | 188, 403 |
| BstDEI | CTNAG | 1 cut(s) | 194 |
| BstKTI | GATC | 3 cut(s) | 328, 387, 487 |
| BstMAI | GTCTC | 1 cut(s) | 450 |
| BstMBI | GATC | 3 cut(s) | 325, 384, 484 |
| BstNI | CCWGG | 1 cut(s) | 372 |
| BstNSI | RCATGY | 1 cut(s) | 497 |
| BstSCI | CCNGG | 1 cut(s) | 370 |
| BstV1I | GCAGC | 1 cut(s) | 402 |
| BstV2I | GAAGAC | 1 cut(s) | 208 |
| BstX2I | RGATCY | 3 cut(s) | 325, 384, 484 |
| BstYI | RGATCY | 3 cut(s) | 325, 384, 484 |
| Cac8I | GCNNGC | 2 cut(s) | 188, 403 |
| CaiI | CAGNNNCTG | 1 cut(s) | 58 |
| Cfr13I | GGNCC | 1 cut(s) | 367 |
| CseI | GACGC | 1 cut(s) | 297 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 323, 358 |
| CviAII | CATG | 4 cut(s) | 21, 26, 146, 494 |
| CviJI | RGCY | 6 cut(s) | 70, 85, 134, 170, 186, 433 |
| CviKI_1 | RGCY | 6 cut(s) | 70, 85, 134, 170, 186, 433 |
| DdeI | CTNAG | 1 cut(s) | 194 |
| DpnI | GATC | 3 cut(s) | 327, 386, 486 |
| DpnII | GATC | 3 cut(s) | 325, 384, 484 |
| Eco47I | GGWCC | 1 cut(s) | 367 |
| Eco88I | CYCGRG | 1 cut(s) | 279 |
| EcoO109I | RGGNCCY | 1 cut(s) | 367 |
| EcoRII | CCWGG | 1 cut(s) | 370 |
| FaeI | CATG | 4 cut(s) | 24, 29, 149, 497 |
| FatI | CATG | 4 cut(s) | 20, 25, 145, 493 |
| FblI | GTMKAC | 1 cut(s) | 311 |
| Fnu4HI | GCNGC | 1 cut(s) | 416 |
| Fsp4HI | GCNGC | 1 cut(s) | 416 |
| FspBI | CTAG | 2 cut(s) | 86, 161 |
| GluI | GCNGC | 1 cut(s) | 416 |
| HgaI | GACGC | 1 cut(s) | 297 |
| Hin1II | CATG | 4 cut(s) | 24, 29, 149, 497 |
| HindIII | AAGCTT | 1 cut(s) | 132 |
| HinfI | GANTC | 3 cut(s) | 37, 55, 61 |
| Hpy166II | GTNNAC | 1 cut(s) | 312 |
| Hpy188I | TCNGA | 2 cut(s) | 42, 60 |
| Hpy188III | TCNNGA | 1 cut(s) | 161 |
| Hpy8I | GTNNAC | 1 cut(s) | 312 |
| HpyAV | CCTTC | 2 cut(s) | 81, 370 |
| HpyCH4V | TGCA | 1 cut(s) | 382 |
| HpyF3I | CTNAG | 1 cut(s) | 194 |
| Hsp92II | CATG | 4 cut(s) | 24, 29, 149, 497 |
| Kzo9I | GATC | 3 cut(s) | 325, 384, 484 |
| LpnPI | CCDG | 5 cut(s) | 16, 62, 357, 384, 525 |
| Lsp1109I | GCAGC | 1 cut(s) | 402 |
| MaeI | CTAG | 2 cut(s) | 86, 161 |
| MaeIII | GTNAC | 1 cut(s) | 564 |
| MalI | GATC | 3 cut(s) | 327, 386, 486 |
| MboI | GATC | 3 cut(s) | 325, 384, 484 |
| MboII | GAAGA | 4 cut(s) | 213, 224, 358, 494 |
| MflI | RGATCY | 3 cut(s) | 325, 384, 484 |
| MluCI | AATT | 4 cut(s) | 43, 76, 177, 350 |
| MnlI | CCTC | 5 cut(s) | 91, 168, 201, 532, 549 |
| MseI | TTAA | 2 cut(s) | 516, 546 |
| MspR9I | CCNGG | 1 cut(s) | 372 |
| MvaI | CCWGG | 1 cut(s) | 372 |
| NdeII | GATC | 3 cut(s) | 325, 384, 484 |
| NlaIII | CATG | 4 cut(s) | 24, 29, 149, 497 |
| NlaIV | GGNNCC | 1 cut(s) | 369 |
| NspI | RCATGY | 1 cut(s) | 497 |
| PaeR7I | CTCGAG | 1 cut(s) | 279 |
| PasI | CCCWGGG | 1 cut(s) | 371 |
| PciI | ACATGT | 1 cut(s) | 493 |
| PfeI | GAWTC | 3 cut(s) | 37, 55, 61 |
| PkrI | GCNGC | 1 cut(s) | 417 |
| PpuMI | RGGWCCY | 1 cut(s) | 367 |
| PscI | ACATGT | 1 cut(s) | 493 |
| Psp5II | RGGWCCY | 1 cut(s) | 367 |
| Psp6I | CCWGG | 1 cut(s) | 370 |
| PspGI | CCWGG | 1 cut(s) | 370 |
| PspN4I | GGNNCC | 1 cut(s) | 369 |
| PspPI | GGNCC | 1 cut(s) | 367 |
| PspPPI | RGGWCCY | 1 cut(s) | 367 |
| PspXI | VCTCGAGB | 1 cut(s) | 279 |
| PstNI | CAGNNNCTG | 1 cut(s) | 58 |
| PsuI | RGATCY | 3 cut(s) | 325, 384, 484 |
| SaqAI | TTAA | 2 cut(s) | 516, 546 |
| SatI | GCNGC | 1 cut(s) | 416 |
| Sau3AI | GATC | 3 cut(s) | 325, 384, 484 |
| Sau96I | GGNCC | 1 cut(s) | 367 |
| ScrFI | CCNGG | 1 cut(s) | 372 |
| SetI | ASST | 9 cut(s) | 35, 87, 136, 188, 247, 381, 435, 448, 571 |
| Sfr274I | CTCGAG | 1 cut(s) | 279 |
| SinI | GGWCC | 1 cut(s) | 367 |
| SlaI | CTCGAG | 1 cut(s) | 279 |
| SmlI | CTYRAG | 1 cut(s) | 279 |
| SmoI | CTYRAG | 1 cut(s) | 279 |
| Sse9I | AATT | 4 cut(s) | 43, 76, 177, 350 |
| SspI | AATATT | 1 cut(s) | 574 |
| SspMI | CTAG | 2 cut(s) | 86, 161 |
| StyD4I | CCNGG | 1 cut(s) | 370 |
| TaqI | TCGA | 2 cut(s) | 254, 280 |
| TasI | AATT | 4 cut(s) | 43, 76, 177, 350 |
| TfiI | GAWTC | 3 cut(s) | 37, 55, 61 |
| Tru1I | TTAA | 2 cut(s) | 516, 546 |
| Tru9I | TTAA | 2 cut(s) | 516, 546 |
| TseI | GCWGC | 1 cut(s) | 415 |
| TspDTI | ATGAA | 3 cut(s) | 272, 443, 566 |
| VpaK11BI | GGWCC | 1 cut(s) | 367 |
| XapI | RAATTY | 2 cut(s) | 43, 177 |
| XbaI | TCTAGA | 1 cut(s) | 160 |
| XceI | RCATGY | 1 cut(s) | 497 |
| XhoI | CTCGAG | 1 cut(s) | 279 |
| XmiI | GTMKAC | 1 cut(s) | 311 |
| XspI | CTAG | 2 cut(s) | 86, 161 |