Rroxscaffold_5G00361040

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000064
Physical Location & Seq
Reverse (-)
41684267 .. 41687147
2881 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00361040.1

Sequence Viewer

Length: 888 bp
ATGGTTCTAATTTTAAATAAGGACCCTTTAAATAAAGGGGTGGTACCTTTGGCTTTCACTAAAGCAGGCCAAAAATTCTGGACTTGTTACACTGAGAGAGATCGTGTCTGCTTTGAGGATGCTATATTTCATCGAGGCCAAGCCTATGCAATTGGAGTGGGGGGATCGACGCTTCTTTCTTTTCGAGATTTTTTGTTGAAATTGGCTAAAACCTCGTCCTACATCATATTGGGCGTAGATTCTAATGCTGATAGAGAGCTTACTCTGCAGTCAAGTAATGGACAACTATTGGATGTAGGATACTATTCAATAGGTTACTATTCCAATGATTTTTTATCTGAATGCTCTAGTGACTATTATTACTCTTCCGACGAGGAGGAGGAGGAGGAGCAGTTGAATACTGAGACAGCCATGGTTATTCATTGCAGATATCCTCCAGAGAAAATTATACTCGCGCCTTCTTTAGGCTCTAAGGCCTACAGCGAATATCTGGTGGAATCAACTAAGGGAGAACTACTGCATGTTCGAAGATTTTATAAAGAATATAAAGAGAAAAAGCACAAGGCATTCAAGGTTTACAAGGTGGTATTGGACGGAAAAGATGGTGGTTCCATGGGGCAGCATGTTGAGGTAAACGGTATTGGAGACGACGCTATATTCATTGATGGACACCAACATTCATTCTCTGTTATGGCATCGAAAATTCCGAGGTGCCGACCAAATTCCATATACTTCACACATACTACTCGACGCCGGGAAATATTAATATGTATCTATGACTTAGAGGCTGGAACTCTCACAGTAGATCATGGAAAAACTGCTCAATATTCTTGGGACACGTTCATTGAGCCAAGGATTCCGAGTTGGGTTGTGCCACCGGTTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

295

Amino Acids

33.49

Weight (kDa)

5.87

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 15 - 260 4.1e-23 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 537
Acc65I GGTACC 1 cut(s) 43
AccB1I GGYRCC 2 cut(s) 43, 711
AccII CGCG 1 cut(s) 455
AclWI GGATC 1 cut(s) 172
AcsI RAATTY 3 cut(s) 74, 702, 721
AcyI GRCGYC 1 cut(s) 751
AfaI GTAC 1 cut(s) 45
AfiI CCNNNNNNNGG 1 cut(s) 464
AflIII ACRYGT 1 cut(s) 837
AgeI ACCGGT 1 cut(s) 877
AgsI TTSAA 4 cut(s) 199, 309, 397, 571
AluBI AGCT 2 cut(s) 259, 885
AluI AGCT 2 cut(s) 259, 885
Alw26I GTCTC 2 cut(s) 398, 639
AlwI GGATC 1 cut(s) 172
AoxI GGCC 3 cut(s) 67, 136, 474
ApeKI GCWGC 1 cut(s) 619
ApoI RAATTY 3 cut(s) 74, 702, 721
AseI ATTAAT 1 cut(s) 764
AsiGI ACCGGT 1 cut(s) 877
Asp718I GGTACC 1 cut(s) 43
AspLEI GCGC 1 cut(s) 457
AspS9I GGNCC 1 cut(s) 22
AsuC2I CCSGG 1 cut(s) 755
AsuII TTCGAA 1 cut(s) 526
AvaII GGWCC 1 cut(s) 22
BanI GGYRCC 2 cut(s) 43, 711
BbvI GCAGC 1 cut(s) 631
BccI CCATC 2 cut(s) 596, 659
BciVI GTATCC 1 cut(s) 293
BcnI CCSGG 1 cut(s) 755
BcoDI GTCTC 2 cut(s) 398, 639
BfaI CTAG 2 cut(s) 348, 886
BfmI CTRYAG 2 cut(s) 266, 478
BfuI GTATCC 1 cut(s) 293
BisI GCNGC 1 cut(s) 620
BlsI GCNGC 1 cut(s) 621
Bme1390I CCNGG 1 cut(s) 755
Bme18I GGWCC 1 cut(s) 22
BmgT120I GGNCC 1 cut(s) 22
BmiI GGNNCC 4 cut(s) 24, 45, 610, 713
BmrFI CCNGG 1 cut(s) 755
BmsI GCATC 2 cut(s) 109, 704
BpmI CTGGAG 1 cut(s) 420
Bpu14I TTCGAA 1 cut(s) 526
BpuMI CCSGG 1 cut(s) 755
BsaHI GRCGYC 1 cut(s) 751
BsaJI CCNNGG 4 cut(s) 411, 612, 707, 851
BsaWI WCCGGW 1 cut(s) 877
BsaXI ACNNNNNCTCC 2 cut(s) 377, 407
Bsc4I CCNNNNNNNGG 1 cut(s) 464
Bse118I RCCGGY 1 cut(s) 877
Bse3DI GCAATG 1 cut(s) 421
BseDI CCNNGG 4 cut(s) 411, 612, 707, 851
BseGI GGATG 2 cut(s) 124, 298
BseLI CCNNNNNNNGG 1 cut(s) 464
BseMI GCAATG 1 cut(s) 421
BseMII CTCAG 2 cut(s) 84, 393
BseRI GAGGAG 5 cut(s) 389, 392, 395, 398, 401
BseXI GCAGC 1 cut(s) 631
Bsh1236I CGCG 1 cut(s) 455
BshFI GGCC 3 cut(s) 69, 138, 476
BshNI GGYRCC 2 cut(s) 43, 711
BshTI ACCGGT 1 cut(s) 877
BsiSI CCGG 2 cut(s) 754, 878
BslFI GGGAC 1 cut(s) 848
BslI CCNNNNNNNGG 1 cut(s) 464
BsmAI GTCTC 2 cut(s) 398, 639
BsmBI CGTCTC 1 cut(s) 639
BsmFI GGGAC 1 cut(s) 848
BsmI GAATGC 2 cut(s) 347, 566
BsnI GGCC 3 cut(s) 69, 138, 476
Bsp119I TTCGAA 1 cut(s) 526
Bsp143I GATC 3 cut(s) 100, 164, 805
Bsp19I CCATGG 2 cut(s) 411, 612
BspANI GGCC 3 cut(s) 69, 138, 476
BspCNI CTCAG 2 cut(s) 85, 394
BspFNI CGCG 1 cut(s) 455
BspLI GGNNCC 4 cut(s) 24, 45, 610, 713
BspMAI CTGCAG 1 cut(s) 270
BspPI GGATC 1 cut(s) 172
BspT104I TTCGAA 1 cut(s) 526
BspT107I GGYRCC 2 cut(s) 43, 711
BsrDI GCAATG 1 cut(s) 421
BsrFI RCCGGY 1 cut(s) 877
BssAI RCCGGY 1 cut(s) 877
BssECI CCNNGG 4 cut(s) 411, 612, 707, 851
BssMI GATC 3 cut(s) 100, 164, 805
BssNI GRCGYC 1 cut(s) 751
BssT1I CCWWGG 3 cut(s) 411, 612, 851
Bst4CI ACNGT 2 cut(s) 638, 802
Bst6I CTCTTC 1 cut(s) 370
BstACI GRCGYC 1 cut(s) 751
BstBI TTCGAA 1 cut(s) 526
BstC8I GCNNGC 1 cut(s) 67
BstDEI CTNAG 5 cut(s) 93, 402, 471, 504, 781
BstDSI CCRYGG 2 cut(s) 411, 612
BstENI CCTNNNNNAGG 1 cut(s) 462
BstF5I GGATG 2 cut(s) 124, 298
BstFNI CGCG 1 cut(s) 455
BstHHI GCGC 1 cut(s) 457
BstKTI GATC 3 cut(s) 103, 167, 808
BstMAI GTCTC 2 cut(s) 398, 639
BstMBI GATC 3 cut(s) 100, 164, 805
BstMWI GCNNNNNNNGC 1 cut(s) 265
BstNSI RCATGY 2 cut(s) 524, 626
BstSCI CCNGG 1 cut(s) 753
BstSFI CTRYAG 2 cut(s) 266, 478
BstUI CGCG 1 cut(s) 455
BstV1I GCAGC 1 cut(s) 631
BsuI GTATCC 1 cut(s) 293
BsuRI GGCC 3 cut(s) 69, 138, 476
BtgI CCRYGG 2 cut(s) 411, 612
BtsCI GGATG 2 cut(s) 124, 298
BtsIMutI CAGTG 1 cut(s) 90
Cac8I GCNNGC 1 cut(s) 67
CfoI GCGC 1 cut(s) 457
Cfr10I RCCGGY 1 cut(s) 877
Cfr13I GGNCC 1 cut(s) 22
CseI GACGC 3 cut(s) 178, 659, 759
Csp6I GTAC 1 cut(s) 44
CspAI ACCGGT 1 cut(s) 877
CspCI CAANNNNNGTGG 2 cut(s) 138, 173
CviAII CATG 5 cut(s) 412, 521, 613, 623, 809
CviQI GTAC 1 cut(s) 44
DdeI CTNAG 5 cut(s) 93, 402, 471, 504, 781
DpnI GATC 3 cut(s) 102, 166, 807
DpnII GATC 3 cut(s) 100, 164, 805
DraI TTTAAA 2 cut(s) 15, 30
Eam1104I CTCTTC 1 cut(s) 370
EarI CTCTTC 1 cut(s) 370
Eco130I CCWWGG 3 cut(s) 411, 612, 851
Eco147I AGGCCT 1 cut(s) 476
Eco32I GATATC 1 cut(s) 431
Eco47I GGWCC 1 cut(s) 22
EcoNI CCTNNNNNAGG 1 cut(s) 462
EcoO109I RGGNCCY 1 cut(s) 22
EcoRV GATATC 1 cut(s) 431
EcoT14I CCWWGG 3 cut(s) 411, 612, 851
ErhI CCWWGG 3 cut(s) 411, 612, 851
Esp3I CGTCTC 1 cut(s) 639
FaeI CATG 5 cut(s) 415, 524, 616, 626, 812
FaqI GGGAC 1 cut(s) 848
FatI CATG 5 cut(s) 411, 520, 612, 622, 808
Fnu4HI GCNGC 1 cut(s) 620
FokI GGATG 2 cut(s) 131, 305
Fsp4HI GCNGC 1 cut(s) 620
FspBI CTAG 2 cut(s) 348, 886
GlaI GCGC 1 cut(s) 456
GluI GCNGC 1 cut(s) 620
GsuI CTGGAG 1 cut(s) 420
HaeIII GGCC 3 cut(s) 69, 138, 476
HapII CCGG 2 cut(s) 754, 878
HgaI GACGC 3 cut(s) 178, 659, 759
HhaI GCGC 1 cut(s) 457
Hin1I GRCGYC 1 cut(s) 751
Hin1II CATG 5 cut(s) 415, 524, 616, 626, 812
Hin6I GCGC 1 cut(s) 455
HinP1I GCGC 1 cut(s) 455
HinfI GANTC 3 cut(s) 239, 497, 856
HpaII CCGG 2 cut(s) 754, 878
Hpy166II GTNNAC 2 cut(s) 577, 634
Hpy188I TCNGA 4 cut(s) 340, 370, 708, 861
Hpy188III TCNNGA 3 cut(s) 79, 185, 437
Hpy8I GTNNAC 2 cut(s) 577, 634
Hpy99I CGWCG 4 cut(s) 172, 374, 653, 753
HpyAV CCTTC 1 cut(s) 468
HpyCH4III ACNGT 2 cut(s) 638, 802
HpyCH4IV ACGT 1 cut(s) 839
HpyCH4V TGCA 4 cut(s) 149, 268, 426, 520
HpyF10VI GCNNNNNNNGC 1 cut(s) 265
HpyF3I CTNAG 5 cut(s) 93, 402, 471, 504, 781
HpySE526I ACGT 1 cut(s) 839
Hsp92I GRCGYC 1 cut(s) 751
Hsp92II CATG 5 cut(s) 415, 524, 616, 626, 812
HspAI GCGC 1 cut(s) 455
KpnI GGTACC 1 cut(s) 47
Kzo9I GATC 3 cut(s) 100, 164, 805
LmnI GCTCC 1 cut(s) 388
LpnPI CCDG 6 cut(s) 51, 64, 450, 476, 767, 774
Lsp1109I GCAGC 1 cut(s) 631
LweI GCATC 2 cut(s) 109, 704
MaeI CTAG 2 cut(s) 348, 886
MaeII ACGT 1 cut(s) 839
MaeIII GTNAC 3 cut(s) 86, 314, 350
MalI GATC 3 cut(s) 102, 166, 807
MboI GATC 3 cut(s) 100, 164, 805
MboII GAAGA 2 cut(s) 357, 540
MfeI CAATTG 1 cut(s) 150
MluCI AATT 7 cut(s) 9, 74, 150, 200, 444, 702, 721
MmeI TCCRAC 1 cut(s) 393
MseI TTAA 3 cut(s) 14, 29, 764
MspI CCGG 2 cut(s) 754, 878
MspR9I CCNGG 1 cut(s) 755
MunI CAATTG 1 cut(s) 150
Mva1269I GAATGC 2 cut(s) 347, 566
MvnI CGCG 1 cut(s) 455
MwoI GCNNNNNNNGC 1 cut(s) 265
NciI CCSGG 1 cut(s) 755
NcoI CCATGG 2 cut(s) 411, 612
NdeII GATC 3 cut(s) 100, 164, 805
NlaIII CATG 5 cut(s) 415, 524, 616, 626, 812
NlaIV GGNNCC 4 cut(s) 24, 45, 610, 713
NmuCI GTSAC 1 cut(s) 350
NspI RCATGY 2 cut(s) 524, 626
NspV TTCGAA 1 cut(s) 526
PceI AGGCCT 1 cut(s) 476
PcsI WCGNNNNNNNCGW 1 cut(s) 704
PctI GAATGC 2 cut(s) 347, 566
PfeI GAWTC 3 cut(s) 239, 497, 856
PinAI ACCGGT 1 cut(s) 877
PkrI GCNGC 1 cut(s) 621
PpuMI RGGWCCY 1 cut(s) 22
PshBI ATTAAT 1 cut(s) 764
PsiI TTATAA 1 cut(s) 537
Psp5II RGGWCCY 1 cut(s) 22
PspN4I GGNNCC 4 cut(s) 24, 45, 610, 713
PspPI GGNCC 1 cut(s) 22
PspPPI RGGWCCY 1 cut(s) 22
PstI CTGCAG 1 cut(s) 270
RsaI GTAC 1 cut(s) 45
RsaNI GTAC 1 cut(s) 44
SaqAI TTAA 3 cut(s) 14, 29, 764
SatI GCNGC 1 cut(s) 620
Sau3AI GATC 3 cut(s) 100, 164, 805
Sau96I GGNCC 1 cut(s) 22
ScrFI CCNGG 1 cut(s) 755
SfaNI GCATC 2 cut(s) 109, 704
SfcI CTRYAG 2 cut(s) 266, 478
SfuI TTCGAA 1 cut(s) 526
SinI GGWCC 1 cut(s) 22
Sse9I AATT 7 cut(s) 9, 74, 150, 200, 444, 702, 721
SseBI AGGCCT 1 cut(s) 476
SspI AATATT 2 cut(s) 762, 827
SspMI CTAG 2 cut(s) 348, 886
StuI AGGCCT 1 cut(s) 476
StyD4I CCNGG 1 cut(s) 753
StyI CCWWGG 3 cut(s) 411, 612, 851
TaaI ACNGT 2 cut(s) 638, 802
TaiI ACGT 1 cut(s) 842
TaqI TCGA 6 cut(s) 133, 167, 184, 526, 698, 748
TasI AATT 7 cut(s) 9, 74, 150, 200, 444, 702, 721
TfiI GAWTC 3 cut(s) 239, 497, 856
Tru1I TTAA 3 cut(s) 14, 29, 764
Tru9I TTAA 3 cut(s) 14, 29, 764
TscAI CASTG 1 cut(s) 97
TseFI GTSAC 1 cut(s) 350
TseI GCWGC 1 cut(s) 619
Tsp45I GTSAC 1 cut(s) 350
TspDTI ATGAA 5 cut(s) 119, 410, 649, 669, 832
TspGWI ACGGA 1 cut(s) 609
TspRI CASTG 1 cut(s) 97
VpaK11BI GGWCC 1 cut(s) 22
VspI ATTAAT 1 cut(s) 764
XagI CCTNNNNNAGG 1 cut(s) 462
XapI RAATTY 3 cut(s) 74, 702, 721
XceI RCATGY 2 cut(s) 524, 626
XspI CTAG 2 cut(s) 348, 886
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.