FvH4_7g23210

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000064
Physical Location & Seq
Forward (+)
18155945 .. 18157099
1155 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g23210.t1

Sequence Viewer

Length: 1155 bp
ATGGAATTCTTAGACTGGGCAGAGCTGCCTGATAACCTCTTGGGTTTAATTTTACATCGATTAACGTCACCGTCAGACTATGTACGGTTTAGTGTTGTTTGTAGGTCATGGAACTTTGTGGCCAAGGACAATTCACGAGAACACTCGGCTCCAATGCTCTTAACTTATTCGGGTGAAGAGAAGATATGGAACTTATGCGACATGACGAATCAAAAAGTTCTTAATTTGCAAGTGGAATTGCCAAACACACGTTTTTGCGGGTTTTCTAAAGGATGGTTGGTAGCTATGGATGACAATTTCATAGTAACCCTTATAAATCCTTTCTCAAAAGTTGTAGGGAGGAGACCTACTAGAGAAAATTCAACTTTTGACCTTCCTCCACTACACCCTCCAGAGATGTCTGATGAACGCTATAGAACTAAGTGGACTAGATATCATGAATATTTTGTGAACAAGGCTATTATTTCAGCAGATCCAGTCTCAAGTGCAAAAGATTGCACCGTTGTGGTCTCATATGCAGATCGTGGTCGGCTGGCTTTTATCAGACTTCATGGAGATACAAGATGGACTTATATTGACGCAGGGATTATTGAACGTGTTTATGAGATTATTTATGCTGAAGATAAACTGTATGCCCTTGATTCTAAGTATCGAGGTTTTTCTTGTGACATTACTACAACAAGTCAGCTCAATTTTACATTGGTTGCAGAAACTTTTGAAGAACATGTTCCTGTGGGCTCATTTATGTTGAAGGAATATTTGGTGGAGTCAAGTGAAGGACTAGTGATGGTTGTTAGATGCATGCGAACCAGACAACGACGACATCGCCCTCGCGTAACGGTGGGGTTCATAGTTTTCAAGTTGGATGCCTATCATCGTAAGTGGGCACCGATAGATACTTTGGGTGACGTGGCTCTCTTTCTTGGGGACTCGGTAATATCTGTGATGGCTTCTGATTTTCCTGGGTGTAAGAGGAATTGCATATACTTCATACACGATTGGGAGCTTTTATCTTTTGATCGTTTTCGTCGTCCTCGTGATTTCGGTGTATGTGACCTGACAGATCAAAAATATTTACCCTTTGAAGATGCAGGAACACTAATCAAGATGAGCCGTCGAACACCGATTTGGACTATGGCAAACATCAAATTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

385

Amino Acids

44.66

Weight (kDa)

7.1

Isoelectric Point (pI)

41.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 6 - 44 1.2e-08 F-box-like
F-box PF00646 6 - 45 2.2e-06 F-box domain
Beta-prop_KIB1-4 PF03478 71 - 350 2.3e-47 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 314
AccB1I GGYRCC 1 cut(s) 886
AccII CGCG 1 cut(s) 834
AciI CCGC 1 cut(s) 258
AclWI GGATC 1 cut(s) 467
AcoI YGGCCR 1 cut(s) 120
AcsI RAATTY 2 cut(s) 5, 358
AcuI CTGAAG 1 cut(s) 639
AfaI GTAC 1 cut(s) 84
AflIII ACRYGT 3 cut(s) 248, 595, 724
AgsI TTSAA 6 cut(s) 363, 593, 719, 751, 859, 1085
AhlI ACTAGT 1 cut(s) 781
AjiI CACGTC 1 cut(s) 910
AjnI CCWGG 1 cut(s) 961
AjuI GAANNNNNNNTTGG 4 cut(s) 743, 775, 1111, 1143
AleI CACNNNNGTG 1 cut(s) 503
AluBI AGCT 4 cut(s) 25, 284, 688, 1006
AluI AGCT 4 cut(s) 25, 284, 688, 1006
Alw26I GTCTC 3 cut(s) 337, 484, 514
AlwI GGATC 1 cut(s) 467
AoxI GGCC 1 cut(s) 120
ApeKI GCWGC 1 cut(s) 25
ApoI RAATTY 2 cut(s) 5, 358
Asp700I GAANNNNTTC 1 cut(s) 726
AsuHPI GGTGA 3 cut(s) 60, 185, 917
BaeGI GKGCMC 1 cut(s) 889
BalI TGGCCA 1 cut(s) 122
BanI GGYRCC 1 cut(s) 886
BanII GRGCYC 1 cut(s) 740
BauI CACGAG 2 cut(s) 135, 1035
BbvI GCAGC 1 cut(s) 12
BccI CCATC 4 cut(s) 267, 558, 781, 940
BceAI ACGGC 1 cut(s) 1098
BciT130I CCWGG 1 cut(s) 963
BcoDI GTCTC 3 cut(s) 337, 484, 514
BcuI ACTAGT 1 cut(s) 781
BfaI CTAG 3 cut(s) 351, 429, 782
BfmI CTRYAG 1 cut(s) 412
BisI GCNGC 1 cut(s) 26
BlsI GCNGC 1 cut(s) 27
Bme1390I CCNGG 1 cut(s) 963
BmgBI CACGTC 1 cut(s) 910
BmiI GGNNCC 2 cut(s) 150, 888
BmrFI CCNGG 1 cut(s) 963
BmrI ACTGGG 1 cut(s) 25
BmsI GCATC 3 cut(s) 788, 856, 1078
BmuI ACTGGG 1 cut(s) 25
BpmI CTGGAG 1 cut(s) 375
BpuEI CTTGAG 1 cut(s) 466
Bsa29I ATCGAT 1 cut(s) 58
BsaBI GATNNNNATC 1 cut(s) 870
BsaI GGTCTC 2 cut(s) 337, 514
BsaJI CCNNGG 2 cut(s) 123, 962
Bse1I ACTGG 2 cut(s) 20, 476
Bse8I GATNNNNATC 1 cut(s) 870
BseBI CCWGG 1 cut(s) 963
BseCI ATCGAT 1 cut(s) 58
BseDI CCNNGG 2 cut(s) 123, 962
BseGI GGATG 3 cut(s) 278, 295, 871
BseJI GATNNNNATC 1 cut(s) 870
BseNI ACTGG 2 cut(s) 20, 476
BseRI GAGGAG 1 cut(s) 355
BseSI GKGCMC 1 cut(s) 889
BseXI GCAGC 1 cut(s) 12
Bsh1236I CGCG 1 cut(s) 834
BshFI GGCC 1 cut(s) 122
BshNI GGYRCC 1 cut(s) 886
BshVI ATCGAT 1 cut(s) 58
BslFI GGGAC 1 cut(s) 941
BsmAI GTCTC 3 cut(s) 337, 484, 514
BsmFI GGGAC 1 cut(s) 941
BsnI GGCC 1 cut(s) 122
Bso31I GGTCTC 2 cut(s) 337, 514
Bsp1286I GDGCHC 2 cut(s) 740, 889
Bsp143I GATC 4 cut(s) 472, 520, 1018, 1063
BspACI CCGC 1 cut(s) 258
BspANI GGCC 1 cut(s) 122
BspDI ATCGAT 1 cut(s) 58
BspFNI CGCG 1 cut(s) 834
BspHI TCATGA 1 cut(s) 436
BspLI GGNNCC 2 cut(s) 150, 888
BspPI GGATC 1 cut(s) 467
BspT107I GGYRCC 1 cut(s) 886
BspTNI GGTCTC 2 cut(s) 337, 514
BsrI ACTGG 2 cut(s) 20, 476
BssECI CCNNGG 2 cut(s) 123, 962
BssMI GATC 4 cut(s) 472, 520, 1018, 1063
BssSI CACGAG 2 cut(s) 135, 1035
BssT1I CCWWGG 1 cut(s) 123
Bst2BI CACGAG 2 cut(s) 135, 1035
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 5 cut(s) 72, 87, 502, 630, 841
Bst6I CTCTTC 1 cut(s) 171
BstC8I GCNNGC 2 cut(s) 534, 803
BstDEI CTNAG 3 cut(s) 10, 420, 645
BstF5I GGATG 3 cut(s) 278, 295, 871
BstFNI CGCG 1 cut(s) 834
BstKTI GATC 4 cut(s) 475, 523, 1021, 1066
BstMAI GTCTC 3 cut(s) 337, 484, 514
BstMBI GATC 4 cut(s) 472, 520, 1018, 1063
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 2 cut(s) 728, 805
BstSCI CCNGG 1 cut(s) 961
BstSFI CTRYAG 1 cut(s) 412
BstSLI GKGCMC 1 cut(s) 889
BstUI CGCG 1 cut(s) 834
BstV1I GCAGC 1 cut(s) 12
BstX2I RGATCY 1 cut(s) 472
BstYI RGATCY 1 cut(s) 472
Bsu15I ATCGAT 1 cut(s) 58
BsuRI GGCC 1 cut(s) 122
BsuTUI ATCGAT 1 cut(s) 58
BtgZI GCGATG 1 cut(s) 809
BtrI CACGTC 1 cut(s) 910
BtsCI GGATG 3 cut(s) 278, 295, 871
Cac8I GCNNGC 2 cut(s) 534, 803
CciI TCATGA 1 cut(s) 436
ClaI ATCGAT 1 cut(s) 58
CseI GACGC 1 cut(s) 587
Csp6I GTAC 1 cut(s) 83
CviAII CATG 6 cut(s) 108, 202, 437, 551, 725, 802
CviQI GTAC 1 cut(s) 83
DdeI CTNAG 3 cut(s) 10, 420, 645
DpnI GATC 4 cut(s) 474, 522, 1020, 1065
DpnII GATC 4 cut(s) 472, 520, 1018, 1063
EaeI YGGCCR 1 cut(s) 120
Eam1104I CTCTTC 1 cut(s) 171
EarI CTCTTC 1 cut(s) 171
Eco130I CCWWGG 1 cut(s) 123
Eco24I GRGCYC 1 cut(s) 740
Eco31I GGTCTC 2 cut(s) 337, 514
Eco32I GATATC 1 cut(s) 434
Eco57I CTGAAG 1 cut(s) 639
EcoRI GAATTC 1 cut(s) 5
EcoRII CCWGG 1 cut(s) 961
EcoRV GATATC 1 cut(s) 434
EcoT14I CCWWGG 1 cut(s) 123
EcoT22I ATGCAT 1 cut(s) 803
EcoT38I GRGCYC 1 cut(s) 740
ErhI CCWWGG 1 cut(s) 123
FaeI CATG 6 cut(s) 111, 205, 440, 554, 728, 805
FalI AAGNNNNNCTT 2 cut(s) 553, 585
FaqI GGGAC 1 cut(s) 941
FatI CATG 6 cut(s) 107, 201, 436, 550, 724, 801
FauI CCCGC 1 cut(s) 251
FauNDI CATATG 1 cut(s) 514
Fnu4HI GCNGC 1 cut(s) 26
FokI GGATG 3 cut(s) 285, 302, 878
FriOI GRGCYC 1 cut(s) 740
Fsp4HI GCNGC 1 cut(s) 26
FspBI CTAG 3 cut(s) 351, 429, 782
GluI GCNGC 1 cut(s) 26
GsuI CTGGAG 1 cut(s) 375
HaeIII GGCC 1 cut(s) 122
HgaI GACGC 1 cut(s) 587
Hin1II CATG 6 cut(s) 111, 205, 440, 554, 728, 805
HinfI GANTC 4 cut(s) 208, 641, 767, 929
HphI GGTGA 3 cut(s) 60, 185, 917
Hpy166II GTNNAC 2 cut(s) 426, 451
Hpy188I TCNGA 4 cut(s) 76, 403, 545, 955
Hpy188III TCNNGA 5 cut(s) 135, 392, 437, 1037, 1105
Hpy8I GTNNAC 2 cut(s) 426, 451
Hpy99I CGWCG 3 cut(s) 822, 1032, 1119
HpyAV CCTTC 3 cut(s) 383, 745, 770
HpyCH4III ACNGT 5 cut(s) 72, 87, 502, 630, 841
HpyCH4IV ACGT 4 cut(s) 65, 250, 595, 909
HpyCH4V TGCA 8 cut(s) 229, 488, 498, 518, 707, 801, 981, 1091
HpyF3I CTNAG 3 cut(s) 10, 420, 645
HpySE526I ACGT 4 cut(s) 65, 250, 595, 909
Hsp92II CATG 6 cut(s) 111, 205, 440, 554, 728, 805
Kzo9I GATC 4 cut(s) 472, 520, 1018, 1063
LmnI GCTCC 2 cut(s) 154, 1003
Lsp1109I GCAGC 1 cut(s) 12
LweI GCATC 3 cut(s) 788, 856, 1078
MaeI CTAG 3 cut(s) 351, 429, 782
MaeII ACGT 4 cut(s) 65, 250, 595, 909
MaeIII GTNAC 6 cut(s) 66, 304, 665, 835, 905, 1052
MalI GATC 4 cut(s) 474, 522, 1020, 1065
MboI GATC 4 cut(s) 472, 520, 1018, 1063
MboII GAAGA 5 cut(s) 188, 193, 632, 731, 1097
MflI RGATCY 1 cut(s) 472
MhlI GDGCHC 2 cut(s) 740, 889
MlsI TGGCCA 1 cut(s) 122
MluNI TGGCCA 1 cut(s) 122
MlyI GAGTC 2 cut(s) 776, 923
MmeI TCCRAC 1 cut(s) 843
MnlI CCTC 8 cut(s) 47, 333, 387, 399, 647, 840, 966, 1044
Mox20I TGGCCA 1 cut(s) 122
Mph1103I ATGCAT 1 cut(s) 803
MroXI GAANNNNTTC 1 cut(s) 726
MscI TGGCCA 1 cut(s) 122
MseI TTAA 4 cut(s) 47, 62, 161, 222
MslI CAYNNNNRTG 1 cut(s) 503
Msp20I TGGCCA 1 cut(s) 122
MspR9I CCNGG 1 cut(s) 963
MvaI CCWGG 1 cut(s) 963
MvnI CGCG 1 cut(s) 834
NdeI CATATG 1 cut(s) 514
NdeII GATC 4 cut(s) 472, 520, 1018, 1063
NlaIII CATG 6 cut(s) 111, 205, 440, 554, 728, 805
NlaIV GGNNCC 2 cut(s) 150, 888
NmeAIII GCCGAG 1 cut(s) 125
NmuCI GTSAC 4 cut(s) 66, 665, 905, 1052
NsiI ATGCAT 1 cut(s) 803
NspI RCATGY 2 cut(s) 728, 805
OliI CACNNNNGTG 1 cut(s) 503
PaeI GCATGC 1 cut(s) 805
PagI TCATGA 1 cut(s) 436
PciI ACATGT 1 cut(s) 724
PcsI WCGNNNNNNNCGW 2 cut(s) 1027, 1033
PdmI GAANNNNTTC 1 cut(s) 726
PfeI GAWTC 2 cut(s) 208, 641
PkrI GCNGC 1 cut(s) 27
PleI GAGTC 2 cut(s) 775, 923
PpsI GAGTC 2 cut(s) 775, 923
PscI ACATGT 1 cut(s) 724
PsiI TTATAA 1 cut(s) 314
Psp6I CCWGG 1 cut(s) 961
PspGI CCWGG 1 cut(s) 961
PspN4I GGNNCC 2 cut(s) 150, 888
PsuI RGATCY 1 cut(s) 472
RsaI GTAC 1 cut(s) 84
RsaNI GTAC 1 cut(s) 83
RseI CAYNNNNRTG 1 cut(s) 503
SaqAI TTAA 4 cut(s) 47, 62, 161, 222
SatI GCNGC 1 cut(s) 26
Sau3AI GATC 4 cut(s) 472, 520, 1018, 1063
SchI GAGTC 2 cut(s) 776, 923
ScrFI CCNGG 1 cut(s) 963
SduI GDGCHC 2 cut(s) 740, 889
SfaNI GCATC 3 cut(s) 788, 856, 1078
SfcI CTRYAG 1 cut(s) 412
SmiMI CAYNNNNRTG 1 cut(s) 503
SmlI CTYRAG 1 cut(s) 481
SmoI CTYRAG 1 cut(s) 481
SpeI ACTAGT 1 cut(s) 781
SphI GCATGC 1 cut(s) 805
SsiI CCGC 1 cut(s) 258
SspI AATATT 3 cut(s) 443, 758, 1073
SspMI CTAG 3 cut(s) 351, 429, 782
StyD4I CCNGG 1 cut(s) 961
StyI CCWWGG 1 cut(s) 123
TaaI ACNGT 5 cut(s) 72, 87, 502, 630, 841
TaiI ACGT 4 cut(s) 68, 253, 598, 912
TaqI TCGA 3 cut(s) 58, 652, 1117
TfiI GAWTC 2 cut(s) 208, 641
Tru1I TTAA 4 cut(s) 47, 62, 161, 222
Tru9I TTAA 4 cut(s) 47, 62, 161, 222
TseFI GTSAC 4 cut(s) 66, 665, 905, 1052
TseI GCWGC 1 cut(s) 25
Tsp45I GTSAC 4 cut(s) 66, 665, 905, 1052
TspDTI ATGAA 6 cut(s) 289, 420, 453, 539, 838, 979
XapI RAATTY 2 cut(s) 5, 358
XceI RCATGY 2 cut(s) 728, 805
XmnI GAANNNNTTC 1 cut(s) 726
XspI CTAG 3 cut(s) 351, 429, 782
Zsp2I ATGCAT 1 cut(s) 803
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.