Rh1DG066700

Protein of unknown function (DUF295)

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
11774672 .. 11776757
2086 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG066700.1

Sequence Viewer

Length: 1344 bp
ATGGCTCAAATGAAAGCCCAAACCAGATTGGAAAAGGAAATAAAGACAGCTCACAAATCAAAGTACTATAAAAGCCAACGCAGGGACTGTCACTGCAAGCCGTACTCCAAGACTCCAGAGATAGATAGATTCTGCAGATCAGAAACTTCGCCGCCGCCGCCGCCATCATCCTTTTCCAGTCAAACACAGCGATCTTCTTCTGGGTTTGAGATTATGGATCCAGATTGGGCGAATTTAGCTAAGCACCTTTTAGATTCAGTTGTAAAGAGATTGGCATTACCCTCGGATTATTTGCAATTCAGCTGTGTTTGTAAGTCATGGTGTTCTGTAGCTAAGGATAATAAAAGCCAACGCTCGAAGATGATAACTCCGATGCTCTTGATTTCAGCCAATAAAAAGCACACCTGGCATTTATATAGGGTCATGGATAACAAGATTCTAGATTTGCAAATAAGTGTACCCAATAAGCGGTATTGTGGATTTTCGAAAGGATGGTTAATAACTCTAGAGAATAATTTTGTTGTAGCCCTGATAAATCCATTCTTTAGGGTTAAAGGAAAGCCGAAGAAAGAAAACTCAATCATTCGCCTCCCTCCTTTGACCTGCAAAGACTTAACTCCCCGCCGGATACTTCATTGGTCTAGAAGATCTGAGAATTACGGTGTCAAGGCGATGATTTCAGCAGACCCAGTATTAAATGCAAGTGATTGCGTCGTTGTCATTATATATGAAGAGCTTAAGCAAATGGCGTTCATCAGGCTAAGTAAAGATACAACTTGGACTTATATTGATCAAAGTGTTGATCCAAGATGGCTCTTAATTGAAGAAGTGACATACTTTCGAGGTAGGTTTTATGCTGTGGATTACTGGCGTAGACTTTTGTCTTTTGATATCACTGCTCAGTCGAATTCAGACGTAAAGTTGGTAGCACAAAGCATCGAAGGAAAGAAATTTGACAAGAAATATATTGTGAATTCAAATGAGAAAGAATTATTGATGGTTCAAAGGTATTATATCCATGGGGGGTCAAGTGTGACAATAGGGTTCAAAGTTTTTGAATTTAAGTTTGACAAGAGCGAGTGGGTGGAGAAAAATGATTTGGGTGATGTTGCTCTCTTTCTTGGTGATAACACTTCAATATCTGTGGTTACTTCAAGTTTGTCAGGATGTCAATCGAATAGCATATACTTTTGCCATGATCATAATGAGAATGATTTTGGACGTCGGTATTGTGATTGTGGTGTTTATGACGTCAAAAGTCAAACCATTACACATTATGATATACCCCCTTTGAAGATGACAGATCGACCAGCCATATGGGTTGTGCCATCTTTTCATTTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

447

Amino Acids

51.77

Weight (kDa)

9.2

Isoelectric Point (pI)

51.25

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 139 - 417 1e-47 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 2 cut(s) 1225, 1254
Acc36I ACCTGC 1 cut(s) 611
AccI GTMKAC 1 cut(s) 874
AciI CCGC 6 cut(s) 152, 155, 158, 161, 469, 622
AclWI GGATC 3 cut(s) 212, 225, 797
AcsI RAATTY 5 cut(s) 232, 907, 950, 973, 1058
AcyI GRCGYC 2 cut(s) 1222, 1251
AfaI GTAC 3 cut(s) 65, 104, 459
AfiI CCNNNNNNNGG 2 cut(s) 82, 468
AflII CTTAAG 1 cut(s) 737
AgsI TTSAA 8 cut(s) 824, 978, 1004, 1048, 1058, 1137, 1155, 1294
AjnI CCWGG 1 cut(s) 404
AjuI GAANNNNNNNTTGG 2 cut(s) 1082, 1114
AluBI AGCT 5 cut(s) 50, 239, 303, 332, 736
AluI AGCT 5 cut(s) 50, 239, 303, 332, 736
AlwI GGATC 3 cut(s) 212, 225, 797
AlwNI CAGNNNCTG 1 cut(s) 87
ApoI RAATTY 5 cut(s) 232, 907, 950, 973, 1058
AsuHPI GGTGA 2 cut(s) 1115, 1136
AsuII TTCGAA 1 cut(s) 485
BamHI GGATCC 1 cut(s) 217
BccI CCATC 5 cut(s) 172, 486, 804, 991, 1336
BceAI ACGGC 1 cut(s) 85
BcgI CGANNNNNNTGC 2 cut(s) 264, 298
BciT130I CCWGG 1 cut(s) 406
BciVI GTATCC 1 cut(s) 621
BclI TGATCA 2 cut(s) 790, 1198
BfaI CTAG 3 cut(s) 440, 506, 642
BfmI CTRYAG 2 cut(s) 133, 327
BfrI CTTAAG 1 cut(s) 737
BfuAI ACCTGC 1 cut(s) 611
BfuI GTATCC 1 cut(s) 621
BglII AGATCT 1 cut(s) 647
BisI GCNGC 4 cut(s) 152, 155, 158, 161
BlpI GCTNAGC 1 cut(s) 240
BlsI GCNGC 4 cut(s) 153, 156, 159, 162
BmcAI AGTACT 1 cut(s) 65
Bme1390I CCNGG 1 cut(s) 406
BmiI GGNNCC 1 cut(s) 219
BmrFI CCNGG 1 cut(s) 406
BmrI ACTGGG 1 cut(s) 683
BmsI GCATC 2 cut(s) 363, 945
BmuI ACTGGG 1 cut(s) 683
BoxI GACNNNNGTC 1 cut(s) 880
BpmI CTGGAG 1 cut(s) 99
Bpu10I CCTNAGC 1 cut(s) 333
Bpu1102I GCTNAGC 1 cut(s) 240
Bpu14I TTCGAA 1 cut(s) 485
BsaBI GATNNNNATC 1 cut(s) 1171
BsaHI GRCGYC 2 cut(s) 1222, 1251
BsaJI CCNNGG 2 cut(s) 282, 1018
Bsc4I CCNNNNNNNGG 2 cut(s) 82, 468
Bse1I ACTGG 3 cut(s) 177, 689, 872
Bse8I GATNNNNATC 1 cut(s) 1171
BseBI CCWGG 1 cut(s) 406
BseDI CCNNGG 2 cut(s) 282, 1018
BseGI GGATG 3 cut(s) 167, 497, 1172
BseJI GATNNNNATC 1 cut(s) 1171
BseLI CCNNNNNNNGG 2 cut(s) 82, 468
BseMII CTCAG 2 cut(s) 642, 914
BseNI ACTGG 3 cut(s) 177, 689, 872
BsiSI CCGG 1 cut(s) 625
BslFI GGGAC 1 cut(s) 98
BslI CCNNNNNNNGG 2 cut(s) 82, 468
BsmFI GGGAC 1 cut(s) 98
Bsp119I TTCGAA 1 cut(s) 485
Bsp143I GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
Bsp1720I GCTNAGC 1 cut(s) 240
Bsp19I CCATGG 1 cut(s) 1018
BspACI CCGC 6 cut(s) 152, 155, 158, 161, 469, 622
BspCNI CTCAG 2 cut(s) 643, 913
BspLI GGNNCC 1 cut(s) 219
BspMAI CTGCAG 1 cut(s) 137
BspMI ACCTGC 1 cut(s) 611
BspPI GGATC 3 cut(s) 212, 225, 797
BspQI GCTCTTC 1 cut(s) 726
BspT104I TTCGAA 1 cut(s) 485
BspTI CTTAAG 1 cut(s) 737
BsrI ACTGG 3 cut(s) 177, 689, 872
BssECI CCNNGG 2 cut(s) 282, 1018
BssMI GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
BssNI GRCGYC 2 cut(s) 1222, 1251
BssT1I CCWWGG 1 cut(s) 1018
Bst2UI CCWGG 1 cut(s) 406
Bst4CI ACNGT 2 cut(s) 89, 662
Bst6I CTCTTC 1 cut(s) 726
BstACI GRCGYC 2 cut(s) 1222, 1251
BstAFI CTTAAG 1 cut(s) 737
BstBI TTCGAA 1 cut(s) 485
BstC8I GCNNGC 1 cut(s) 98
BstDEI CTNAG 5 cut(s) 240, 333, 651, 761, 900
BstDSI CCRYGG 1 cut(s) 1018
BstF5I GGATG 3 cut(s) 167, 497, 1172
BstKTI GATC 8 cut(s) 140, 194, 220, 650, 793, 805, 1201, 1306
BstMBI GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
BstMWI GCNNNNNNNGC 4 cut(s) 157, 160, 236, 406
BstNI CCWGG 1 cut(s) 406
BstPAI GACNNNNGTC 1 cut(s) 880
BstSCI CCNGG 1 cut(s) 404
BstSFI CTRYAG 2 cut(s) 133, 327
BstX2I RGATCY 2 cut(s) 217, 647
BstXI CCANNNNNNTGG 1 cut(s) 1317
BstYI RGATCY 2 cut(s) 217, 647
BsuI GTATCC 1 cut(s) 621
BtgI CCRYGG 1 cut(s) 1018
BtgZI GCGATG 1 cut(s) 686
BtsCI GGATG 3 cut(s) 167, 497, 1172
BtsI GCAGTG 2 cut(s) 91, 894
BtsIMutI CAGTG 2 cut(s) 91, 894
BveI ACCTGC 1 cut(s) 611
Cac8I GCNNGC 1 cut(s) 98
CaiI CAGNNNCTG 1 cut(s) 87
CseI GACGC 1 cut(s) 700
Csp6I GTAC 3 cut(s) 64, 103, 458
CspCI CAANNNNNGTGG 2 cut(s) 1125, 1160
CviAII CATG 4 cut(s) 318, 424, 1019, 1196
CviQI GTAC 3 cut(s) 64, 103, 458
DdeI CTNAG 5 cut(s) 240, 333, 651, 761, 900
DpnI GATC 8 cut(s) 139, 193, 219, 649, 792, 804, 1200, 1305
DpnII GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
Eam1104I CTCTTC 1 cut(s) 726
EarI CTCTTC 1 cut(s) 726
Eco130I CCWWGG 1 cut(s) 1018
Eco32I GATATC 1 cut(s) 892
EcoRI GAATTC 2 cut(s) 907, 973
EcoRII CCWGG 1 cut(s) 404
EcoRV GATATC 1 cut(s) 892
EcoT14I CCWWGG 1 cut(s) 1018
ErhI CCWWGG 1 cut(s) 1018
FaeI CATG 4 cut(s) 321, 427, 1022, 1199
FaqI GGGAC 1 cut(s) 98
FatI CATG 4 cut(s) 317, 423, 1018, 1195
FauI CCCGC 1 cut(s) 629
FauNDI CATATG 1 cut(s) 1316
FbaI TGATCA 2 cut(s) 790, 1198
FblI GTMKAC 1 cut(s) 874
Fnu4HI GCNGC 4 cut(s) 152, 155, 158, 161
FokI GGATG 3 cut(s) 154, 504, 1179
Fsp4HI GCNGC 4 cut(s) 152, 155, 158, 161
FspBI CTAG 3 cut(s) 440, 506, 642
GluI GCNGC 4 cut(s) 152, 155, 158, 161
GsuI CTGGAG 1 cut(s) 99
HapII CCGG 1 cut(s) 625
HgaI GACGC 1 cut(s) 700
Hin1I GRCGYC 2 cut(s) 1222, 1251
Hin1II CATG 4 cut(s) 321, 427, 1022, 1199
HinfI GANTC 4 cut(s) 112, 129, 254, 436
HpaII CCGG 1 cut(s) 625
HphI GGTGA 2 cut(s) 1115, 1136
Hpy166II GTNNAC 2 cut(s) 458, 875
Hpy188I TCNGA 5 cut(s) 142, 286, 372, 652, 913
Hpy188III TCNNGA 7 cut(s) 116, 221, 379, 440, 506, 642, 1164
Hpy8I GTNNAC 2 cut(s) 458, 875
Hpy99I CGWCG 2 cut(s) 716, 1227
HpyAV CCTTC 1 cut(s) 935
HpyCH4III ACNGT 2 cut(s) 89, 662
HpyCH4IV ACGT 3 cut(s) 915, 1222, 1251
HpyCH4V TGCA 6 cut(s) 96, 135, 295, 448, 606, 701
HpyF10VI GCNNNNNNNGC 4 cut(s) 157, 160, 236, 406
HpyF3I CTNAG 5 cut(s) 240, 333, 651, 761, 900
HpySE526I ACGT 3 cut(s) 915, 1222, 1251
Hsp92I GRCGYC 2 cut(s) 1222, 1251
Hsp92II CATG 4 cut(s) 321, 427, 1022, 1199
Ksp22I TGATCA 2 cut(s) 790, 1198
Kzo9I GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
LguI GCTCTTC 1 cut(s) 726
LweI GCATC 2 cut(s) 363, 945
MaeI CTAG 3 cut(s) 440, 506, 642
MaeII ACGT 3 cut(s) 915, 1222, 1251
MaeIII GTNAC 4 cut(s) 89, 829, 1033, 1147
MalI GATC 8 cut(s) 139, 193, 219, 649, 792, 804, 1200, 1305
MboI GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
MboII GAAGA 8 cut(s) 186, 189, 370, 577, 657, 743, 836, 1306
MflI RGATCY 2 cut(s) 217, 647
MlyI GAGTC 1 cut(s) 106
MnlI CCTC 4 cut(s) 292, 599, 603, 836
MseI TTAA 7 cut(s) 497, 552, 614, 695, 738, 818, 1062
MspA1I CMGCKG 1 cut(s) 303
MspCI CTTAAG 1 cut(s) 737
MspI CCGG 1 cut(s) 625
MspR9I CCNGG 1 cut(s) 406
MvaI CCWGG 1 cut(s) 406
MwoI GCNNNNNNNGC 4 cut(s) 157, 160, 236, 406
NcoI CCATGG 1 cut(s) 1018
NdeI CATATG 1 cut(s) 1316
NdeII GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
NlaIII CATG 4 cut(s) 321, 427, 1022, 1199
NlaIV GGNNCC 1 cut(s) 219
NmuCI GTSAC 3 cut(s) 89, 829, 1033
NspV TTCGAA 1 cut(s) 485
PciSI GCTCTTC 1 cut(s) 726
PfeI GAWTC 3 cut(s) 129, 254, 436
PkrI GCNGC 4 cut(s) 153, 156, 159, 162
PleI GAGTC 1 cut(s) 106
PpsI GAGTC 1 cut(s) 106
PshAI GACNNNNGTC 1 cut(s) 880
Psp6I CCWGG 1 cut(s) 404
PspGI CCWGG 1 cut(s) 404
PspN4I GGNNCC 1 cut(s) 219
PstI CTGCAG 1 cut(s) 137
PstNI CAGNNNCTG 1 cut(s) 87
PsuI RGATCY 2 cut(s) 217, 647
PvuII CAGCTG 1 cut(s) 303
RsaI GTAC 3 cut(s) 65, 104, 459
RsaNI GTAC 3 cut(s) 64, 103, 458
SapI GCTCTTC 1 cut(s) 726
SaqAI TTAA 7 cut(s) 497, 552, 614, 695, 738, 818, 1062
SatI GCNGC 4 cut(s) 152, 155, 158, 161
Sau3AI GATC 8 cut(s) 137, 191, 217, 647, 790, 802, 1198, 1303
ScaI AGTACT 1 cut(s) 65
SchI GAGTC 1 cut(s) 106
ScrFI CCNGG 1 cut(s) 406
SfaNI GCATC 2 cut(s) 363, 945
SfcI CTRYAG 2 cut(s) 133, 327
SfuI TTCGAA 1 cut(s) 485
SmlI CTYRAG 1 cut(s) 737
SmoI CTYRAG 1 cut(s) 737
SsiI CCGC 6 cut(s) 152, 155, 158, 161, 469, 622
SspMI CTAG 3 cut(s) 440, 506, 642
StyD4I CCNGG 1 cut(s) 404
StyI CCWWGG 1 cut(s) 1018
TaaI ACNGT 2 cut(s) 89, 662
TaiI ACGT 3 cut(s) 918, 1225, 1254
TaqI TCGA 7 cut(s) 356, 485, 841, 905, 939, 1175, 1306
TatI WGTACW 1 cut(s) 63
TauI GCSGC 4 cut(s) 154, 157, 160, 163
TfiI GAWTC 3 cut(s) 129, 254, 436
Tru1I TTAA 7 cut(s) 497, 552, 614, 695, 738, 818, 1062
Tru9I TTAA 7 cut(s) 497, 552, 614, 695, 738, 818, 1062
TscAI CASTG 2 cut(s) 98, 901
TseFI GTSAC 3 cut(s) 89, 829, 1033
Tsp45I GTSAC 3 cut(s) 89, 829, 1033
TspDTI ATGAA 5 cut(s) 26, 623, 742, 744, 1325
TspRI CASTG 2 cut(s) 98, 901
Vha464I CTTAAG 1 cut(s) 737
XapI RAATTY 5 cut(s) 232, 907, 950, 973, 1058
XbaI TCTAGA 3 cut(s) 439, 505, 641
XmiI GTMKAC 1 cut(s) 874
XspI CTAG 3 cut(s) 440, 506, 642
ZraI GACGTC 2 cut(s) 1223, 1252
ZrmI AGTACT 1 cut(s) 65
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.