RchiOBHm_Chr4g0417201

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000064
Physical Location & Seq
Reverse (-)
42470331 .. 42471746
1416 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ38729

Sequence Viewer

Length: 1416 bp
ATGGCTCTCACCTCCAAGGAACGTACCCAGCAATCAGTAGATTCGTCATCAGATTGGGCAAATCTTCCAGAATCCCTTCTGTTTCTGATTCTTGATAAGTTGTTTGTATCCATGCACCATGTTTGGTTCGCTGCCGTTTGCAAGGAGTGGTGTGCGGTCTCAAAACAATACCATCAAGAAACGAACCGGTGTCCGCAGACACTATGTCCCATGCTCATGATCCCTTCCGAATACAAACCTCACAATAAGCTAACACTTTATGACGTTTTTCAGCGAAAAGACTACAGCAAGATTGAGTTCCCTGTGCCTTGTCTTGAGCATGTACATGATTATAATTGTCTTGATCTTGTATCCAGTTTTCATGGTTGGTGGTTTAGGAGAGGGTGGTCATCGCATGAGGCAGTATACACTGCAACTCTAGAGAACTTGTTCATGAATGTAGCTATTCCTCTCCCTCCTTTCCATGTTTCTTTGATGCAGCAGGATTGTTGGAGTAGGATTTTACTATCTGCTGATCCCATTTTGAATCCGGACGACTTAATGGTTCTAATTTTAAATAAGGACCCTTTAAATAAAGGGGTGGTACCGTTGGCTTTCACTAAAGCAGGCCAAAAATTCTGGACTTCTTACACTGAGAGAGATGGTGTCTGCTTTGAGGATGCTATATTTCATCGAGGCCAAGCCTATGCAATTGGAGTGGGGGGATCGGTTTTTTCACTCGAGCTGAATGATCACAGCAAGCTTTTAGACAAATTAGAACTTGCACCTCCATTGGGCTTAGATTCTGATGCTGATAGAGAGCTTACTCTGGAGTTGAGTAATGGACAACTATTGGATGTAGGATACTATTCAATAGGTTACTATTCCAATGATTTTTTATCTGAATGCTCTAGTGACTATTATTACTCTTCCGACGACGAGGAGGAGGAGGAGGAGGAGTTGAATACTGAGACAGCCATGGTTATTCATTGCAGATACCCTCCAGAGAAAATTATACTTGCGCCTTCTTTAGGCTCTAAGGCCTATAGCGAATATCTTGTGGAATCAACTAAGGGAGAACTATTGCATGTTCAAAGATTATATAGGCACAAAAAATTCAAGGTTTACAAGGTGGTATTGGACGGAAAAGATGGTGGTTCCATGGTGCAGCATGTTGAGGTAAACGGTATTGGAGAAGACGCTATATTCATTGATGAACATCAACATTCATTCTCTGTTTTGGCATCGAAAATTCCGGGGTGCCAACCAAATTCCATATACTTCACACGTATTACTCGACGCCGGGAAATATTAATATGTATCTATGACTTAGAGGCTGGGACTCTCACAGTAGATCATCAAAAAACTGCTCTATATTCTTGGGACAAGTTCATTGAGCCAAGGTTTCCGAGTTGGGCTGTGCCACCGGTTAGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

471

Amino Acids

53.93

Weight (kDa)

5.18

Isoelectric Point (pI)

42.53

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 98 - 280 3.1e-16 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 326 - 436 2.1e-17 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 333
Acc65I GGTACC 1 cut(s) 583
AccB1I GGYRCC 2 cut(s) 583, 1239
AccI GTMKAC 1 cut(s) 405
AccIII TCCGGA 1 cut(s) 529
AciI CCGC 2 cut(s) 155, 194
AclWI GGATC 3 cut(s) 214, 509, 712
AcsI RAATTY 4 cut(s) 614, 1094, 1230, 1249
AcyI GRCGYC 1 cut(s) 1279
AfaI GTAC 3 cut(s) 25, 324, 585
AfiI CCNNNNNNNGG 2 cut(s) 773, 1010
AflIII ACRYGT 1 cut(s) 1265
AgeI ACCGGT 2 cut(s) 186, 1405
AgsI TTSAA 5 cut(s) 526, 852, 943, 1073, 1099
AhdI GACNNNNNGTC 1 cut(s) 204
AluBI AGCT 6 cut(s) 250, 443, 724, 742, 802, 1413
AluI AGCT 6 cut(s) 250, 443, 724, 742, 802, 1413
Alw26I GTCTC 2 cut(s) 163, 944
AlwI GGATC 3 cut(s) 214, 509, 712
Ama87I CYCGRG 1 cut(s) 719
Aor13HI TCCGGA 1 cut(s) 529
AoxI GGCC 3 cut(s) 607, 676, 1020
ApeKI GCWGC 3 cut(s) 131, 478, 1147
ApoI RAATTY 4 cut(s) 614, 1094, 1230, 1249
AseI ATTAAT 1 cut(s) 1292
AsiGI ACCGGT 2 cut(s) 186, 1405
Asp700I GAANNNNTTC 2 cut(s) 75, 428
Asp718I GGTACC 1 cut(s) 583
AspLEI GCGC 1 cut(s) 1003
AspS9I GGNCC 1 cut(s) 562
AsuC2I CCSGG 2 cut(s) 1236, 1283
AvaI CYCGRG 1 cut(s) 719
AvaII GGWCC 1 cut(s) 562
BanI GGYRCC 2 cut(s) 583, 1239
BbsI GAAGAC 1 cut(s) 1182
BbvI GCAGC 3 cut(s) 118, 490, 1159
BccI CCATC 3 cut(s) 180, 635, 1124
BceAI ACGGC 1 cut(s) 119
BciVI GTATCC 3 cut(s) 118, 361, 836
BclI TGATCA 1 cut(s) 730
BcnI CCSGG 2 cut(s) 1236, 1283
BcoDI GTCTC 2 cut(s) 163, 944
BfaI CTAG 3 cut(s) 419, 891, 1414
BfmI CTRYAG 2 cut(s) 283, 1024
BfuI GTATCC 3 cut(s) 118, 361, 836
BisI GCNGC 3 cut(s) 132, 479, 1148
BlsI GCNGC 3 cut(s) 133, 480, 1149
Bme1390I CCNGG 2 cut(s) 1236, 1283
Bme18I GGWCC 1 cut(s) 562
BmeRI GACNNNNNGTC 1 cut(s) 204
BmeT110I CYCGRG 1 cut(s) 719
BmgT120I GGNCC 1 cut(s) 562
BmiI GGNNCC 4 cut(s) 564, 585, 1138, 1241
BmrFI CCNGG 2 cut(s) 1236, 1283
BmsI GCATC 4 cut(s) 465, 649, 778, 1232
BpiI GAAGAC 1 cut(s) 1182
BpmI CTGGAG 2 cut(s) 830, 966
BpuEI CTTGAG 1 cut(s) 335
BpuMI CCSGG 2 cut(s) 1236, 1283
BsaAI YACGTR 1 cut(s) 1268
BsaBI GATNNNNATC 1 cut(s) 1197
BsaHI GRCGYC 1 cut(s) 1279
BsaI GGTCTC 1 cut(s) 163
BsaJI CCNNGG 5 cut(s) 15, 957, 1140, 1235, 1379
BsaWI WCCGGW 3 cut(s) 186, 529, 1405
BsaXI ACNNNNNCTCC 2 cut(s) 923, 953
Bsc4I CCNNNNNNNGG 2 cut(s) 773, 1010
Bse118I RCCGGY 2 cut(s) 186, 1405
Bse1I ACTGG 1 cut(s) 354
Bse3DI GCAATG 1 cut(s) 967
Bse8I GATNNNNATC 1 cut(s) 1197
BseAI TCCGGA 1 cut(s) 529
BseDI CCNNGG 5 cut(s) 15, 957, 1140, 1235, 1379
BseGI GGATG 2 cut(s) 664, 841
BseJI GATNNNNATC 1 cut(s) 1197
BseLI CCNNNNNNNGG 2 cut(s) 773, 1010
BseMI GCAATG 1 cut(s) 967
BseMII CTCAG 2 cut(s) 624, 939
BseNI ACTGG 1 cut(s) 354
BseRI GAGGAG 6 cut(s) 935, 938, 941, 944, 947, 950
BseXI GCAGC 3 cut(s) 118, 490, 1159
BseYI CCCAGC 2 cut(s) 27, 1316
BsgI GTGCAG 1 cut(s) 1166
BshFI GGCC 3 cut(s) 609, 678, 1022
BshNI GGYRCC 2 cut(s) 583, 1239
BshTI ACCGGT 2 cut(s) 186, 1405
BsiHKCI CYCGRG 1 cut(s) 719
BsiSI CCGG 5 cut(s) 187, 530, 1235, 1282, 1406
BslFI GGGAC 3 cut(s) 192, 1333, 1376
BslI CCNNNNNNNGG 2 cut(s) 773, 1010
BsmAI GTCTC 2 cut(s) 163, 944
BsmFI GGGAC 3 cut(s) 192, 1333, 1376
BsmI GAATGC 1 cut(s) 890
BsnI GGCC 3 cut(s) 609, 678, 1022
Bso31I GGTCTC 1 cut(s) 163
BsoBI CYCGRG 1 cut(s) 719
Bsp13I TCCGGA 1 cut(s) 529
Bsp1407I TGTACA 1 cut(s) 322
Bsp143I GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
Bsp19I CCATGG 2 cut(s) 957, 1140
BspACI CCGC 2 cut(s) 155, 194
BspANI GGCC 3 cut(s) 609, 678, 1022
BspCNI CTCAG 2 cut(s) 625, 940
BspEI TCCGGA 1 cut(s) 529
BspHI TCATGA 2 cut(s) 216, 432
BspLI GGNNCC 4 cut(s) 564, 585, 1138, 1241
BspPI GGATC 3 cut(s) 214, 509, 712
BspT107I GGYRCC 2 cut(s) 583, 1239
BspTNI GGTCTC 1 cut(s) 163
BsrDI GCAATG 1 cut(s) 967
BsrFI RCCGGY 2 cut(s) 186, 1405
BsrGI TGTACA 1 cut(s) 322
BsrI ACTGG 1 cut(s) 354
BssAI RCCGGY 2 cut(s) 186, 1405
BssECI CCNNGG 5 cut(s) 15, 957, 1140, 1235, 1379
BssMI GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
BssNAI GTATAC 1 cut(s) 406
BssNI GRCGYC 1 cut(s) 1279
BssT1I CCWWGG 4 cut(s) 15, 957, 1140, 1379
Bst1107I GTATAC 1 cut(s) 406
Bst4CI ACNGT 3 cut(s) 588, 1166, 1330
Bst6I CTCTTC 1 cut(s) 913
BstACI GRCGYC 1 cut(s) 1279
BstAUI TGTACA 1 cut(s) 322
BstBAI YACGTR 1 cut(s) 1268
BstC8I GCNNGC 2 cut(s) 607, 740
BstDEI CTNAG 6 cut(s) 633, 778, 948, 1017, 1050, 1309
BstDSI CCRYGG 2 cut(s) 957, 1140
BstENI CCTNNNNNAGG 1 cut(s) 1008
BstF5I GGATG 2 cut(s) 664, 841
BstHHI GCGC 1 cut(s) 1003
BstKTI GATC 6 cut(s) 222, 346, 517, 707, 733, 1336
BstMAI GTCTC 2 cut(s) 163, 944
BstMBI GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
BstNSI RCATGY 3 cut(s) 323, 1070, 1154
BstSCI CCNGG 2 cut(s) 1234, 1281
BstSFI CTRYAG 2 cut(s) 283, 1024
BstV1I GCAGC 3 cut(s) 118, 490, 1159
BstV2I GAAGAC 1 cut(s) 1182
BstZ17I GTATAC 1 cut(s) 406
BsuI GTATCC 3 cut(s) 118, 361, 836
BsuRI GGCC 3 cut(s) 609, 678, 1022
BtgI CCRYGG 2 cut(s) 957, 1140
BtgZI GCGATG 1 cut(s) 375
BtsCI GGATG 2 cut(s) 664, 841
BtsI GCAGTG 1 cut(s) 408
BtsIMutI CAGTG 2 cut(s) 408, 630
Cac8I GCNNGC 2 cut(s) 607, 740
CciI TCATGA 2 cut(s) 216, 432
CfoI GCGC 1 cut(s) 1003
Cfr10I RCCGGY 2 cut(s) 186, 1405
Cfr13I GGNCC 1 cut(s) 562
CseI GACGC 2 cut(s) 1187, 1287
Csp6I GTAC 3 cut(s) 24, 323, 584
CspAI ACCGGT 2 cut(s) 186, 1405
CspCI CAANNNNNGTGG 2 cut(s) 678, 713
CviQI GTAC 3 cut(s) 24, 323, 584
DdeI CTNAG 6 cut(s) 633, 778, 948, 1017, 1050, 1309
DpnI GATC 6 cut(s) 221, 345, 516, 706, 732, 1335
DpnII GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
DraI TTTAAA 2 cut(s) 555, 570
DriI GACNNNNNGTC 1 cut(s) 204
Eam1104I CTCTTC 1 cut(s) 913
Eam1105I GACNNNNNGTC 1 cut(s) 204
EarI CTCTTC 1 cut(s) 913
Eco130I CCWWGG 4 cut(s) 15, 957, 1140, 1379
Eco147I AGGCCT 1 cut(s) 1022
Eco31I GGTCTC 1 cut(s) 163
Eco47I GGWCC 1 cut(s) 562
Eco88I CYCGRG 1 cut(s) 719
EcoNI CCTNNNNNAGG 1 cut(s) 1008
EcoO109I RGGNCCY 1 cut(s) 562
EcoT14I CCWWGG 4 cut(s) 15, 957, 1140, 1379
ErhI CCWWGG 4 cut(s) 15, 957, 1140, 1379
FaqI GGGAC 3 cut(s) 192, 1333, 1376
FbaI TGATCA 1 cut(s) 730
FblI GTMKAC 1 cut(s) 405
Fnu4HI GCNGC 3 cut(s) 132, 479, 1148
FokI GGATG 2 cut(s) 671, 848
Fsp4HI GCNGC 3 cut(s) 132, 479, 1148
FspBI CTAG 3 cut(s) 419, 891, 1414
GlaI GCGC 1 cut(s) 1002
GluI GCNGC 3 cut(s) 132, 479, 1148
GsaI CCCAGC 2 cut(s) 31, 1320
GsuI CTGGAG 2 cut(s) 830, 966
HaeIII GGCC 3 cut(s) 609, 678, 1022
HapII CCGG 5 cut(s) 187, 530, 1235, 1282, 1406
HgaI GACGC 2 cut(s) 1187, 1287
HhaI GCGC 1 cut(s) 1003
Hin1I GRCGYC 1 cut(s) 1279
Hin6I GCGC 1 cut(s) 1001
HinP1I GCGC 1 cut(s) 1001
HindIII AAGCTT 1 cut(s) 740
HinfI GANTC 7 cut(s) 41, 71, 88, 526, 782, 1043, 1321
HpaII CCGG 5 cut(s) 187, 530, 1235, 1282, 1406
Hpy166II GTNNAC 3 cut(s) 406, 1105, 1162
Hpy188I TCNGA 7 cut(s) 52, 87, 229, 787, 883, 913, 1389
Hpy8I GTNNAC 3 cut(s) 406, 1105, 1162
Hpy99I CGWCG 3 cut(s) 917, 920, 1281
HpyAV CCTTC 3 cut(s) 86, 234, 1014
HpyCH4III ACNGT 3 cut(s) 588, 1166, 1330
HpyCH4IV ACGT 3 cut(s) 22, 264, 1267
HpyCH4V TGCA 9 cut(s) 115, 141, 413, 478, 689, 764, 972, 1066, 1147
HpyF3I CTNAG 6 cut(s) 633, 778, 948, 1017, 1050, 1309
HpySE526I ACGT 3 cut(s) 22, 264, 1267
Hsp92I GRCGYC 1 cut(s) 1279
HspAI GCGC 1 cut(s) 1001
Kpn2I TCCGGA 1 cut(s) 529
KpnI GGTACC 1 cut(s) 587
Ksp22I TGATCA 1 cut(s) 730
Kzo9I GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
Lsp1109I GCAGC 3 cut(s) 118, 490, 1159
LweI GCATC 4 cut(s) 465, 649, 778, 1232
MaeI CTAG 3 cut(s) 419, 891, 1414
MaeII ACGT 3 cut(s) 22, 264, 1267
MaeIII GTNAC 2 cut(s) 857, 893
MalI GATC 6 cut(s) 221, 345, 516, 706, 732, 1335
MboI GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
MboII GAAGA 3 cut(s) 56, 900, 1187
MfeI CAATTG 1 cut(s) 690
MluCI AATT 9 cut(s) 334, 549, 614, 690, 752, 990, 1094, 1230, 1249
MlyI GAGTC 1 cut(s) 1315
MmeI TCCRAC 2 cut(s) 470, 936
MroI TCCGGA 1 cut(s) 529
MroXI GAANNNNTTC 2 cut(s) 75, 428
MseI TTAA 4 cut(s) 539, 554, 569, 1292
MslI CAYNNNNRTG 2 cut(s) 215, 324
MspI CCGG 5 cut(s) 187, 530, 1235, 1282, 1406
MspR9I CCNGG 2 cut(s) 1236, 1283
MunI CAATTG 1 cut(s) 690
Mva1269I GAATGC 1 cut(s) 890
NciI CCSGG 2 cut(s) 1236, 1283
NcoI CCATGG 2 cut(s) 957, 1140
NdeII GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
NlaIV GGNNCC 4 cut(s) 564, 585, 1138, 1241
NmuCI GTSAC 1 cut(s) 893
NspI RCATGY 3 cut(s) 323, 1070, 1154
PaeR7I CTCGAG 1 cut(s) 719
PagI TCATGA 2 cut(s) 216, 432
PceI AGGCCT 1 cut(s) 1022
PcsI WCGNNNNNNNCGW 1 cut(s) 1273
PctI GAATGC 1 cut(s) 890
PdmI GAANNNNTTC 2 cut(s) 75, 428
PfeI GAWTC 6 cut(s) 41, 71, 88, 526, 782, 1043
PinAI ACCGGT 2 cut(s) 186, 1405
PkrI GCNGC 3 cut(s) 133, 480, 1149
PleI GAGTC 1 cut(s) 1315
PpsI GAGTC 1 cut(s) 1315
Ppu21I YACGTR 1 cut(s) 1268
PpuMI RGGWCCY 1 cut(s) 562
PshBI ATTAAT 1 cut(s) 1292
PsiI TTATAA 1 cut(s) 333
Psp5II RGGWCCY 1 cut(s) 562
PspFI CCCAGC 2 cut(s) 27, 1316
PspN4I GGNNCC 4 cut(s) 564, 585, 1138, 1241
PspPI GGNCC 1 cut(s) 562
PspPPI RGGWCCY 1 cut(s) 562
PspXI VCTCGAGB 1 cut(s) 719
RsaI GTAC 3 cut(s) 25, 324, 585
RsaNI GTAC 3 cut(s) 24, 323, 584
RseI CAYNNNNRTG 2 cut(s) 215, 324
SaqAI TTAA 4 cut(s) 539, 554, 569, 1292
SatI GCNGC 3 cut(s) 132, 479, 1148
Sau3AI GATC 6 cut(s) 219, 343, 514, 704, 730, 1333
Sau96I GGNCC 1 cut(s) 562
SchI GAGTC 1 cut(s) 1315
ScrFI CCNGG 2 cut(s) 1236, 1283
SfaNI GCATC 4 cut(s) 465, 649, 778, 1232
SfcI CTRYAG 2 cut(s) 283, 1024
Sfr274I CTCGAG 1 cut(s) 719
SinI GGWCC 1 cut(s) 562
SlaI CTCGAG 1 cut(s) 719
SmiMI CAYNNNNRTG 2 cut(s) 215, 324
SmlI CTYRAG 2 cut(s) 314, 719
SmoI CTYRAG 2 cut(s) 314, 719
Sse9I AATT 9 cut(s) 334, 549, 614, 690, 752, 990, 1094, 1230, 1249
SseBI AGGCCT 1 cut(s) 1022
SsiI CCGC 2 cut(s) 155, 194
SspI AATATT 1 cut(s) 1290
SspMI CTAG 3 cut(s) 419, 891, 1414
StuI AGGCCT 1 cut(s) 1022
StyD4I CCNGG 2 cut(s) 1234, 1281
StyI CCWWGG 4 cut(s) 15, 957, 1140, 1379
TaaI ACNGT 3 cut(s) 588, 1166, 1330
TaiI ACGT 3 cut(s) 25, 267, 1270
TaqI TCGA 4 cut(s) 673, 720, 1226, 1276
TasI AATT 9 cut(s) 334, 549, 614, 690, 752, 990, 1094, 1230, 1249
TatI WGTACW 1 cut(s) 322
TfiI GAWTC 6 cut(s) 41, 71, 88, 526, 782, 1043
Tru1I TTAA 4 cut(s) 539, 554, 569, 1292
Tru9I TTAA 4 cut(s) 539, 554, 569, 1292
TscAI CASTG 2 cut(s) 415, 637
TseFI GTSAC 1 cut(s) 893
TseI GCWGC 3 cut(s) 131, 478, 1147
Tsp45I GTSAC 1 cut(s) 893
TspDTI ATGAA 9 cut(s) 350, 421, 449, 659, 956, 1177, 1197, 1209, 1360
TspGWI ACGGA 1 cut(s) 1137
TspRI CASTG 2 cut(s) 415, 637
VpaK11BI GGWCC 1 cut(s) 562
VspI ATTAAT 1 cut(s) 1292
XagI CCTNNNNNAGG 1 cut(s) 1008
XapI RAATTY 4 cut(s) 614, 1094, 1230, 1249
XbaI TCTAGA 1 cut(s) 418
XceI RCATGY 3 cut(s) 323, 1070, 1154
XhoI CTCGAG 1 cut(s) 719
XmiI GTMKAC 1 cut(s) 405
XmnI GAANNNNTTC 2 cut(s) 75, 428
XspI CTAG 3 cut(s) 419, 891, 1414
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.