RchiOBHm_Chr2g0133991

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000064
Physical Location & Seq
Reverse (-)
51005796 .. 51007732
1937 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ50508

Sequence Viewer

Length: 1203 bp
ATGGCTGCTACCTTCCGCAAACAACTATTGGCAGACTGGTCTAGTCTTCCTCATGTCATTCTCTCAGACATTCTGGATAAGTTGTTGGAACCAATTGACCATGTTCGTTTTGCTGCCGTTTGCAAGGAATGGCATGCTCTCGCAACAGACTATAACCACACAACCCAGCGTTGTTTTAAGGTGCATCCCATGCTTATGATCCCTTCAGAATCCCAAGGAAAGCGAAAACTATACAGCATCTCTGAGCAAAAAGTCTACAACAACTTTGAGTTACCACAAGCTTGTAATAGCACTAAGAGGTGTTGTGGCTCGAGCAATGCTCCTGGTTGGTTGGTCGCAGTAGATCTACTAGGCGAACATCAACTCAGTACAACTCTTGTGAACGTGTTCAAAAGAGAAGTGACGCCCATTTGTCTACCTCCATTGCATTTCAATGCCCAGACTCATTGGTTCAGGGTTTTCTCCCCAAAGGTTATCTTATCAGCTGATCCAATTGCGAATCCAGACAATTATGTGGTTGTGGCAGTTTATGATAGAGTTTCAAGGTTCGCTTTCATAAAAGGAGGACAAACAGTCTGGACTTACCTTGAGGTCCGCTCCTTCTTTACTGATGCTATATTTTATAAAAGAAAAGTCTATGCTGTCGGACAATGGGGACGGATTACCTCGTTTGATGTTAATAGCAAGTCAGTAGAAGAAAATTTACTTACACATGGAGGATATCCGTTTTCATGTTATGCGCATAAGGGGTATCTTGTGGAAACAACCAAAGGAGACTTGTTGCATGTTCGAAGATTTTTGAAACAGAAGGATGTACCACGAGATCACTATTTCCATTATGAGGATAATGAGTTCTGGACTGAGAGCTTCAAGGTTTACAAGGTGGCTTTGTTTGTTGGTGACAATCACTCGATGTGTGTTTTGGCTTCAAACTTTCCTGGGTGCCAGCCAAATTCCATATACTACACAGACGATTTGATAGAACTTGGAGAAGTGCGATTAGTTGATGATGGATCAATTGATATGGACGACATCTTCAGTTTAGTCAAACTAGAGGATGAAACCATCTCTAATGGACCAAGTGATATGGGCATCTTCAATTTAGAGGATGGAAGCATTACACAACATTATTCTCTAAATCCTTGGCACAGGAACATCCCACCTGCTATCTGGATCATGCCATTGTTTAATGGATTCGGCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

400

Amino Acids

45.8

Weight (kDa)

6.14

Isoelectric Point (pI)

35.64

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 13 - 50 3.7e-08 F-box-like
Beta-prop_KIB1-4 PF03478 77 - 366 6.7e-44 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 624
AarI CACCTGC 1 cut(s) 1171
Acc16I TGCGCA 1 cut(s) 741
Acc36I ACCTGC 1 cut(s) 1171
AccB1I GGYRCC 1 cut(s) 942
AccBSI CCGCTC 1 cut(s) 597
AccI GTMKAC 2 cut(s) 255, 415
AciI CCGC 2 cut(s) 16, 595
AclWI GGATC 4 cut(s) 193, 482, 1021, 1181
AcsI RAATTY 2 cut(s) 700, 952
AcuI CTGAAG 2 cut(s) 189, 1021
AcyI GRCGYC 1 cut(s) 404
AfaI GTAC 2 cut(s) 370, 816
AfiI CCNNNNNNNGG 1 cut(s) 841
AflIII ACRYGT 1 cut(s) 384
AgsI TTSAA 7 cut(s) 391, 433, 543, 802, 871, 930, 1099
AhdI GACNNNNNGTC 1 cut(s) 572
AjnI CCWGG 2 cut(s) 322, 937
AloI GAACNNNNNNTCC 2 cut(s) 836, 868
AluBI AGCT 3 cut(s) 281, 485, 867
AluI AGCT 3 cut(s) 281, 485, 867
Alw26I GTCTC 1 cut(s) 768
AlwI GGATC 4 cut(s) 193, 482, 1021, 1181
Ama87I CYCGRG 1 cut(s) 310
ApeKI GCWGC 2 cut(s) 5, 113
ApoI RAATTY 2 cut(s) 700, 952
Asp700I GAANNNNTTC 1 cut(s) 386
AspLEI GCGC 1 cut(s) 742
AspS9I GGNCC 2 cut(s) 592, 1076
AsuHPI GGTGA 1 cut(s) 911
AsuII TTCGAA 1 cut(s) 790
AvaI CYCGRG 1 cut(s) 310
AvaII GGWCC 2 cut(s) 592, 1076
BanI GGYRCC 1 cut(s) 942
BarI GAAGNNNNNNTAC 2 cut(s) 687, 719
BauI CACGAG 1 cut(s) 819
BbsI GAAGAC 1 cut(s) 38
BbvI GCAGC 1 cut(s) 100
BccI CCATC 3 cut(s) 1004, 1073, 1103
BceAI ACGGC 1 cut(s) 101
BciT130I CCWGG 2 cut(s) 324, 939
BcoDI GTCTC 1 cut(s) 768
BfaI CTAG 3 cut(s) 42, 350, 1052
BfuAI ACCTGC 1 cut(s) 1171
BglII AGATCT 1 cut(s) 343
BisI GCNGC 2 cut(s) 6, 114
BlsI GCNGC 2 cut(s) 7, 115
Bme1390I CCNGG 2 cut(s) 324, 939
Bme18I GGWCC 2 cut(s) 592, 1076
BmeRI GACNNNNNGTC 1 cut(s) 572
BmeT110I CYCGRG 1 cut(s) 310
BmgT120I GGNCC 2 cut(s) 592, 1076
BmiI GGNNCC 2 cut(s) 90, 944
BmrFI CCNGG 2 cut(s) 324, 939
BmsI GCATC 4 cut(s) 193, 246, 601, 1101
BpiI GAAGAC 1 cut(s) 38
BplI GAGNNNNNCTC 4 cut(s) 304, 336, 581, 613
Bpu14I TTCGAA 1 cut(s) 790
BpuEI CTTGAG 1 cut(s) 608
BsaHI GRCGYC 1 cut(s) 404
BsaJI CCNNGG 3 cut(s) 214, 938, 1142
Bsc4I CCNNNNNNNGG 1 cut(s) 841
Bse1I ACTGG 1 cut(s) 41
Bse3DI GCAATG 2 cut(s) 322, 422
BseBI CCWGG 2 cut(s) 324, 939
BseDI CCNNGG 3 cut(s) 214, 938, 1142
BseGI GGATG 5 cut(s) 184, 817, 1063, 1114, 1155
BseLI CCNNNNNNNGG 1 cut(s) 841
BseMI GCAATG 2 cut(s) 322, 422
BseMII CTCAG 4 cut(s) 78, 234, 379, 852
BseNI ACTGG 1 cut(s) 41
BseXI GCAGC 1 cut(s) 100
BseYI CCCAGC 1 cut(s) 165
BshNI GGYRCC 1 cut(s) 942
BsiHKCI CYCGRG 1 cut(s) 310
BslFI GGGAC 1 cut(s) 669
BslI CCNNNNNNNGG 1 cut(s) 841
BsmAI GTCTC 1 cut(s) 768
BsmFI GGGAC 1 cut(s) 669
BsoBI CYCGRG 1 cut(s) 310
Bsp119I TTCGAA 1 cut(s) 790
Bsp143I GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
BspACI CCGC 2 cut(s) 16, 595
BspCNI CTCAG 4 cut(s) 77, 235, 378, 853
BspLI GGNNCC 2 cut(s) 90, 944
BspMI ACCTGC 1 cut(s) 1171
BspPI GGATC 4 cut(s) 193, 482, 1021, 1181
BspT104I TTCGAA 1 cut(s) 790
BspT107I GGYRCC 1 cut(s) 942
BsrBI CCGCTC 1 cut(s) 597
BsrDI GCAATG 2 cut(s) 322, 422
BsrI ACTGG 1 cut(s) 41
BssECI CCNNGG 3 cut(s) 214, 938, 1142
BssMI GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
BssNI GRCGYC 1 cut(s) 404
BssSI CACGAG 1 cut(s) 819
BssT1I CCWWGG 2 cut(s) 214, 1142
Bst2BI CACGAG 1 cut(s) 819
Bst2UI CCWGG 2 cut(s) 324, 939
Bst4CI ACNGT 1 cut(s) 574
BstACI GRCGYC 1 cut(s) 404
BstAPI GCANNNNNTGC 1 cut(s) 190
BstBI TTCGAA 1 cut(s) 790
BstC8I GCNNGC 2 cut(s) 135, 947
BstDEI CTNAG 5 cut(s) 64, 243, 294, 365, 861
BstF5I GGATG 5 cut(s) 184, 817, 1063, 1114, 1155
BstHHI GCGC 1 cut(s) 742
BstKTI GATC 6 cut(s) 201, 346, 490, 826, 1016, 1176
BstMAI GTCTC 1 cut(s) 768
BstMBI GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
BstMWI GCNNNNNNNGC 1 cut(s) 190
BstNI CCWGG 2 cut(s) 324, 939
BstNSI RCATGY 2 cut(s) 137, 788
BstSCI CCNGG 2 cut(s) 322, 937
BstV1I GCAGC 1 cut(s) 100
BstV2I GAAGAC 1 cut(s) 38
BstX2I RGATCY 1 cut(s) 343
BstYI RGATCY 1 cut(s) 343
BtsCI GGATG 5 cut(s) 184, 817, 1063, 1114, 1155
BveI ACCTGC 1 cut(s) 1171
Cac8I GCNNGC 2 cut(s) 135, 947
CfoI GCGC 1 cut(s) 742
Cfr13I GGNCC 2 cut(s) 592, 1076
CseI GACGC 1 cut(s) 412
Csp6I GTAC 2 cut(s) 369, 815
CviAII CATG 8 cut(s) 53, 101, 134, 190, 713, 732, 785, 1177
CviJI RGCY 9 cut(s) 5, 281, 309, 485, 867, 887, 926, 949, 1200
CviKI_1 RGCY 9 cut(s) 5, 281, 309, 485, 867, 887, 926, 949, 1200
CviQI GTAC 2 cut(s) 369, 815
DdeI CTNAG 5 cut(s) 64, 243, 294, 365, 861
DpnI GATC 6 cut(s) 200, 345, 489, 825, 1015, 1175
DpnII GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
DriI GACNNNNNGTC 1 cut(s) 572
Eam1105I GACNNNNNGTC 1 cut(s) 572
Eco130I CCWWGG 2 cut(s) 214, 1142
Eco32I GATATC 1 cut(s) 722
Eco47I GGWCC 2 cut(s) 592, 1076
Eco57I CTGAAG 2 cut(s) 189, 1021
Eco88I CYCGRG 1 cut(s) 310
EcoRII CCWGG 2 cut(s) 322, 937
EcoRV GATATC 1 cut(s) 722
EcoT14I CCWWGG 2 cut(s) 214, 1142
ErhI CCWWGG 2 cut(s) 214, 1142
FaeI CATG 8 cut(s) 56, 104, 137, 193, 716, 735, 788, 1180
FalI AAGNNNNNCTT 4 cut(s) 461, 493, 535, 567
FaqI GGGAC 1 cut(s) 669
FatI CATG 8 cut(s) 52, 100, 133, 189, 712, 731, 784, 1176
FblI GTMKAC 2 cut(s) 255, 415
Fnu4HI GCNGC 2 cut(s) 6, 114
FokI GGATG 5 cut(s) 171, 824, 1070, 1121, 1142
Fsp4HI GCNGC 2 cut(s) 6, 114
FspAI RTGCGCAY 1 cut(s) 741
FspBI CTAG 3 cut(s) 42, 350, 1052
FspI TGCGCA 1 cut(s) 741
GlaI GCGC 1 cut(s) 741
GluI GCNGC 2 cut(s) 6, 114
GsaI CCCAGC 1 cut(s) 169
HgaI GACGC 1 cut(s) 412
HhaI GCGC 1 cut(s) 742
Hin1I GRCGYC 1 cut(s) 404
Hin1II CATG 8 cut(s) 56, 104, 137, 193, 716, 735, 788, 1180
Hin6I GCGC 1 cut(s) 740
HinP1I GCGC 1 cut(s) 740
HindIII AAGCTT 1 cut(s) 279
HinfI GANTC 4 cut(s) 209, 442, 499, 1194
HphI GGTGA 1 cut(s) 911
Hpy166II GTNNAC 4 cut(s) 256, 382, 416, 877
Hpy188I TCNGA 4 cut(s) 67, 208, 244, 647
Hpy188III TCNNGA 5 cut(s) 74, 503, 577, 856, 1171
Hpy8I GTNNAC 4 cut(s) 256, 382, 416, 877
HpyAV CCTTC 4 cut(s) 22, 213, 610, 802
HpyCH4III ACNGT 1 cut(s) 574
HpyCH4IV ACGT 1 cut(s) 384
HpyCH4V TGCA 4 cut(s) 123, 184, 427, 784
HpyF10VI GCNNNNNNNGC 1 cut(s) 190
HpyF3I CTNAG 5 cut(s) 64, 243, 294, 365, 861
HpySE526I ACGT 1 cut(s) 384
Hsp92I GRCGYC 1 cut(s) 404
Hsp92II CATG 8 cut(s) 56, 104, 137, 193, 716, 735, 788, 1180
HspAI GCGC 1 cut(s) 740
Kzo9I GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
LmnI GCTCC 2 cut(s) 325, 602
Lsp1109I GCAGC 1 cut(s) 100
LweI GCATC 4 cut(s) 193, 246, 601, 1101
MaeI CTAG 3 cut(s) 42, 350, 1052
MaeII ACGT 1 cut(s) 384
MaeIII GTNAC 3 cut(s) 270, 400, 899
MalI GATC 6 cut(s) 200, 345, 489, 825, 1015, 1175
MbiI CCGCTC 1 cut(s) 597
MboI GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
MboII GAAGA 5 cut(s) 38, 707, 804, 1027, 1087
MfeI CAATTG 3 cut(s) 93, 492, 1017
MflI RGATCY 1 cut(s) 343
MluCI AATT 7 cut(s) 93, 492, 508, 700, 952, 1017, 1099
MlyI GAGTC 1 cut(s) 436
MmeI TCCRAC 2 cut(s) 66, 625
MroXI GAANNNNTTC 1 cut(s) 386
MseI TTAA 3 cut(s) 177, 678, 1188
MslI CAYNNNNRTG 2 cut(s) 194, 432
MspA1I CMGCKG 1 cut(s) 485
MspR9I CCNGG 2 cut(s) 324, 939
MunI CAATTG 3 cut(s) 93, 492, 1017
MvaI CCWGG 2 cut(s) 324, 939
MwoI GCNNNNNNNGC 1 cut(s) 190
NdeII GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
NlaIII CATG 8 cut(s) 56, 104, 137, 193, 716, 735, 788, 1180
NlaIV GGNNCC 2 cut(s) 90, 944
NmuCI GTSAC 2 cut(s) 400, 899
NsbI TGCGCA 1 cut(s) 741
NspI RCATGY 2 cut(s) 137, 788
NspV TTCGAA 1 cut(s) 790
PaeI GCATGC 1 cut(s) 137
PaeR7I CTCGAG 1 cut(s) 310
PaqCI CACCTGC 1 cut(s) 1171
PdmI GAANNNNTTC 1 cut(s) 386
PfeI GAWTC 3 cut(s) 209, 499, 1194
PkrI GCNGC 2 cut(s) 7, 115
PleI GAGTC 1 cut(s) 436
PpsI GAGTC 1 cut(s) 436
PsiI TTATAA 1 cut(s) 624
Psp6I CCWGG 2 cut(s) 322, 937
PspFI CCCAGC 1 cut(s) 165
PspGI CCWGG 2 cut(s) 322, 937
PspN4I GGNNCC 2 cut(s) 90, 944
PspPI GGNCC 2 cut(s) 592, 1076
PspXI VCTCGAGB 1 cut(s) 310
PsuI RGATCY 1 cut(s) 343
PvuII CAGCTG 1 cut(s) 485
RsaI GTAC 2 cut(s) 370, 816
RsaNI GTAC 2 cut(s) 369, 815
RseI CAYNNNNRTG 2 cut(s) 194, 432
SaqAI TTAA 3 cut(s) 177, 678, 1188
SatI GCNGC 2 cut(s) 6, 114
Sau3AI GATC 6 cut(s) 198, 343, 487, 823, 1013, 1173
Sau96I GGNCC 2 cut(s) 592, 1076
SchI GAGTC 1 cut(s) 436
ScrFI CCNGG 2 cut(s) 324, 939
SfaNI GCATC 4 cut(s) 193, 246, 601, 1101
Sfr274I CTCGAG 1 cut(s) 310
SfuI TTCGAA 1 cut(s) 790
SinI GGWCC 2 cut(s) 592, 1076
SlaI CTCGAG 1 cut(s) 310
SmiMI CAYNNNNRTG 2 cut(s) 194, 432
SmlI CTYRAG 2 cut(s) 310, 587
SmoI CTYRAG 2 cut(s) 310, 587
SphI GCATGC 1 cut(s) 137
Sse9I AATT 7 cut(s) 93, 492, 508, 700, 952, 1017, 1099
SsiI CCGC 2 cut(s) 16, 595
SspMI CTAG 3 cut(s) 42, 350, 1052
StyD4I CCNGG 2 cut(s) 322, 937
StyI CCWWGG 2 cut(s) 214, 1142
TaaI ACNGT 1 cut(s) 574
TaiI ACGT 1 cut(s) 387
TaqI TCGA 3 cut(s) 311, 790, 911
TasI AATT 7 cut(s) 93, 492, 508, 700, 952, 1017, 1099
TatI WGTACW 1 cut(s) 368
TfiI GAWTC 3 cut(s) 209, 499, 1194
Tru1I TTAA 3 cut(s) 177, 678, 1188
Tru9I TTAA 3 cut(s) 177, 678, 1188
TseFI GTSAC 2 cut(s) 400, 899
TseI GCWGC 2 cut(s) 5, 113
Tsp45I GTSAC 2 cut(s) 400, 899
TspDTI ATGAA 3 cut(s) 544, 720, 1074
TspGWI ACGGA 2 cut(s) 673, 714
VpaK11BI GGWCC 2 cut(s) 592, 1076
XapI RAATTY 2 cut(s) 700, 952
XceI RCATGY 2 cut(s) 137, 788
XcmI CCANNNNNNNNNTGG 1 cut(s) 1167
XhoI CTCGAG 1 cut(s) 310
XmiI GTMKAC 2 cut(s) 255, 415
XmnI GAANNNNTTC 1 cut(s) 386
XspI CTAG 3 cut(s) 42, 350, 1052
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.