FvH4_1g05590

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000064
Physical Location & Seq
Reverse (-)
2950527 .. 2951435
909 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05590.t1

Sequence Viewer

Length: 909 bp
ATGTTCGAGCATGTTAAAGAATGGATCCCCAGAGTAATCTTGTCTGCTAACCCAGCTTTGCATCCGGAAAACTATTATGTGCTATTTGCATTATATAGACCATTGCCGCACTGCATACCATTGCCAAACGGCGTAGTACGACGACATATGAATGTTCATGATCCAACGTTAGCGCTATTGACGCACCGCATACCAAACGGCGTAGTACGACGAATTATAAATGTTTATAATCCAACGTTAGCGCTATTTAAAGGAGGACAAGAATCTTGGATCACGATCGACCGACTAGATCAACATTTTCCTAAGTTTGATGATGCTATATTTTATAGAAACAAAATCTGCTTGCTTCTTGAAAGCAGAAATAAGATGGTAGGCTCCGGGATGGTAACCTTGGATGTTGATAGCATTAACCTTACACAGCCGAAGATACAGTATAGTGGTTTTAAACCAGAACCTGCTAGGAATATTTTCCATGCACATTGTTGGGAGCAATATCTCGTGGAGTCAACAAACGGAGACCTATTGCTCGTTCCAAGATTTTATGAGTTTGAAGAAACCTCGTTTGGCGTTTGCAAGATCGTGTTCAACGAGGAAGACAAATCCCCCTTTCAGCTGGTTGAGGAAAAATGCATCGGAGATGATGCAATATTCTTAGGTCAGAACCAATCCCAGTCTGTTTTAGCTACAAGTATTCCTGGCTGCACGCCGAACTGCATATACTATGCTACAGAAAGTGTTAGACGGGATGAGTATCCGAAAGATTATAGTGATATCTTAAAAAGCGAGATGGGTATTTTCAATTTAGGGGACAGAACCAGAACTACACTAATCGTCTCTGATTCTATAAGTAACTGGAATTGGAACGTGATGAATATGCCATTTTGGGTCCTGCCATCATTGAACATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

303

Amino Acids

34.83

Weight (kDa)

5.86

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 62 - 267 2.7e-24 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 218, 228
Acc36I ACCTGC 1 cut(s) 463
AccIII TCCGGA 1 cut(s) 64
AciI CCGC 2 cut(s) 107, 187
AclI AACGTT 2 cut(s) 167, 236
AclWI GGATC 4 cut(s) 19, 32, 155, 278
AfaI GTAC 2 cut(s) 138, 207
AfeI AGCGCT 2 cut(s) 174, 243
AgsI TTSAA 5 cut(s) 353, 551, 586, 799, 901
AjnI CCWGG 1 cut(s) 694
AjuI GAANNNNNNNTTGG 2 cut(s) 546, 578
AluBI AGCT 3 cut(s) 56, 613, 683
AluI AGCT 3 cut(s) 56, 613, 683
Alw26I GTCTC 2 cut(s) 510, 838
AlwI GGATC 4 cut(s) 19, 32, 155, 278
AlwNI CAGNNNCTG 1 cut(s) 455
Aor13HI TCCGGA 1 cut(s) 64
Aor51HI AGCGCT 2 cut(s) 174, 243
ApeKI GCWGC 1 cut(s) 699
Asp700I GAANNNNTTC 1 cut(s) 467
AspLEI GCGC 2 cut(s) 175, 244
AspS9I GGNCC 1 cut(s) 886
AsuC2I CCSGG 1 cut(s) 379
AvaII GGWCC 1 cut(s) 886
BamHI GGATCC 1 cut(s) 24
BauI CACGAG 1 cut(s) 497
BbsI GAAGAC 1 cut(s) 600
BbvI GCAGC 1 cut(s) 686
BccI CCATC 4 cut(s) 361, 376, 781, 901
BceAI ACGGC 2 cut(s) 145, 214
BciT130I CCWGG 1 cut(s) 696
BciVI GTATCC 1 cut(s) 762
BcnI CCSGG 1 cut(s) 379
BcoDI GTCTC 2 cut(s) 510, 838
BfaI CTAG 2 cut(s) 287, 459
BfmI CTRYAG 1 cut(s) 726
BfoI RGCGCY 2 cut(s) 176, 245
BfuAI ACCTGC 1 cut(s) 463
BfuI GTATCC 1 cut(s) 762
BisI GCNGC 2 cut(s) 107, 700
BlsI GCNGC 2 cut(s) 108, 701
Bme1390I CCNGG 2 cut(s) 379, 696
Bme18I GGWCC 1 cut(s) 886
BmgT120I GGNCC 1 cut(s) 886
BmiI GGNNCC 3 cut(s) 26, 376, 887
BmrFI CCNGG 2 cut(s) 379, 696
BmrI ACTGGG 1 cut(s) 664
BmsI GCATC 4 cut(s) 70, 304, 631, 639
BmuI ACTGGG 1 cut(s) 664
BpiI GAAGAC 1 cut(s) 600
BpuMI CCSGG 1 cut(s) 379
BsaBI GATNNNNATC 2 cut(s) 275, 750
BsaI GGTCTC 1 cut(s) 510
BsaJI CCNNGG 1 cut(s) 390
BsaWI WCCGGW 1 cut(s) 64
Bse1I ACTGG 2 cut(s) 670, 857
Bse3DI GCAATG 2 cut(s) 101, 119
Bse8I GATNNNNATC 2 cut(s) 275, 750
BseAI TCCGGA 1 cut(s) 64
BseBI CCWGG 1 cut(s) 696
BseDI CCNNGG 1 cut(s) 390
BseGI GGATG 4 cut(s) 61, 387, 400, 751
BseJI GATNNNNATC 2 cut(s) 275, 750
BseMI GCAATG 2 cut(s) 101, 119
BseNI ACTGG 2 cut(s) 670, 857
BseXI GCAGC 1 cut(s) 686
BseYI CCCAGC 1 cut(s) 52
BsgI GTGCAG 1 cut(s) 685
Bsh1285I CGRYCG 2 cut(s) 279, 283
BsiEI CGRYCG 2 cut(s) 279, 283
BsiSI CCGG 2 cut(s) 65, 378
BslFI GGGAC 1 cut(s) 821
BsmAI GTCTC 2 cut(s) 510, 838
BsmBI CGTCTC 1 cut(s) 838
BsmFI GGGAC 1 cut(s) 821
Bso31I GGTCTC 1 cut(s) 510
Bsp13I TCCGGA 1 cut(s) 64
Bsp143I GATC 6 cut(s) 24, 160, 270, 276, 289, 576
BspACI CCGC 2 cut(s) 107, 187
BspEI TCCGGA 1 cut(s) 64
BspHI TCATGA 1 cut(s) 157
BspLI GGNNCC 3 cut(s) 26, 376, 887
BspMI ACCTGC 1 cut(s) 463
BspPI GGATC 4 cut(s) 19, 32, 155, 278
BspTNI GGTCTC 1 cut(s) 510
BsrDI GCAATG 2 cut(s) 101, 119
BsrI ACTGG 2 cut(s) 670, 857
BssECI CCNNGG 1 cut(s) 390
BssMI GATC 6 cut(s) 24, 160, 270, 276, 289, 576
BssSI CACGAG 1 cut(s) 497
BssT1I CCWWGG 1 cut(s) 390
Bst2BI CACGAG 1 cut(s) 497
Bst2UI CCWGG 1 cut(s) 696
Bst4CI ACNGT 1 cut(s) 432
BstC8I GCNNGC 2 cut(s) 344, 704
BstDEI CTNAG 2 cut(s) 303, 652
BstEII GGTNACC 1 cut(s) 385
BstF5I GGATG 4 cut(s) 61, 387, 400, 751
BstH2I RGCGCY 2 cut(s) 176, 245
BstHHI GCGC 2 cut(s) 175, 244
BstKTI GATC 6 cut(s) 27, 163, 273, 279, 292, 579
BstMAI GTCTC 2 cut(s) 510, 838
BstMBI GATC 6 cut(s) 24, 160, 270, 276, 289, 576
BstMCI CGRYCG 2 cut(s) 279, 283
BstMWI GCNNNNNNNGC 2 cut(s) 53, 181
BstNI CCWGG 1 cut(s) 696
BstNSI RCATGY 1 cut(s) 14
BstPI GGTNACC 1 cut(s) 385
BstSCI CCNGG 2 cut(s) 377, 694
BstSFI CTRYAG 1 cut(s) 726
BstV1I GCAGC 1 cut(s) 686
BstV2I GAAGAC 1 cut(s) 600
BstX2I RGATCY 1 cut(s) 24
BstYI RGATCY 1 cut(s) 24
BsuI GTATCC 1 cut(s) 762
BtsCI GGATG 4 cut(s) 61, 387, 400, 751
BtsI GCAGTG 1 cut(s) 109
BtsIMutI CAGTG 1 cut(s) 109
BveI ACCTGC 1 cut(s) 463
Cac8I GCNNGC 2 cut(s) 344, 704
CaiI CAGNNNCTG 1 cut(s) 455
CciI TCATGA 1 cut(s) 157
CfoI GCGC 2 cut(s) 175, 244
Cfr13I GGNCC 1 cut(s) 886
CseI GACGC 1 cut(s) 190
Csp6I GTAC 2 cut(s) 137, 206
CviAII CATG 3 cut(s) 11, 158, 473
CviJI RGCY 6 cut(s) 56, 375, 421, 613, 683, 699
CviKI_1 RGCY 6 cut(s) 56, 375, 421, 613, 683, 699
CviQI GTAC 2 cut(s) 137, 206
DdeI CTNAG 2 cut(s) 303, 652
DpnI GATC 6 cut(s) 26, 162, 272, 278, 291, 578
DpnII GATC 6 cut(s) 24, 160, 270, 276, 289, 576
DraI TTTAAA 2 cut(s) 250, 445
Eco130I CCWWGG 1 cut(s) 390
Eco31I GGTCTC 1 cut(s) 510
Eco32I GATATC 1 cut(s) 772
Eco47I GGWCC 1 cut(s) 886
Eco47III AGCGCT 2 cut(s) 174, 243
Eco91I GGTNACC 1 cut(s) 385
EcoO109I RGGNCCY 1 cut(s) 886
EcoO65I GGTNACC 1 cut(s) 385
EcoRII CCWGG 1 cut(s) 694
EcoRV GATATC 1 cut(s) 772
EcoT14I CCWWGG 1 cut(s) 390
EcoT22I ATGCAT 1 cut(s) 632
ErhI CCWWGG 1 cut(s) 390
Esp3I CGTCTC 1 cut(s) 838
FaeI CATG 3 cut(s) 14, 161, 476
FaqI GGGAC 1 cut(s) 821
FatI CATG 3 cut(s) 10, 157, 472
FauNDI CATATG 1 cut(s) 147
Fnu4HI GCNGC 2 cut(s) 107, 700
FokI GGATG 4 cut(s) 48, 394, 407, 758
Fsp4HI GCNGC 2 cut(s) 107, 700
FspBI CTAG 2 cut(s) 287, 459
GlaI GCGC 2 cut(s) 174, 243
GluI GCNGC 2 cut(s) 107, 700
GsaI CCCAGC 1 cut(s) 56
HaeII RGCGCY 2 cut(s) 176, 245
HapII CCGG 2 cut(s) 65, 378
HgaI GACGC 1 cut(s) 190
HhaI GCGC 2 cut(s) 175, 244
Hin1II CATG 3 cut(s) 14, 161, 476
Hin6I GCGC 2 cut(s) 173, 242
HinP1I GCGC 2 cut(s) 173, 242
HincII GTYRAC 1 cut(s) 507
HindII GTYRAC 1 cut(s) 507
HinfI GANTC 3 cut(s) 263, 503, 839
HpaII CCGG 2 cut(s) 65, 378
Hpy166II GTNNAC 1 cut(s) 507
Hpy188I TCNGA 4 cut(s) 635, 660, 756, 838
Hpy188III TCNNGA 4 cut(s) 65, 158, 274, 350
Hpy8I GTNNAC 1 cut(s) 507
Hpy99I CGWCG 2 cut(s) 144, 213
HpyCH4III ACNGT 1 cut(s) 432
HpyCH4IV ACGT 3 cut(s) 167, 236, 864
HpyCH4V TGCA 9 cut(s) 61, 89, 114, 476, 573, 630, 644, 702, 714
HpyF10VI GCNNNNNNNGC 2 cut(s) 53, 181
HpyF3I CTNAG 2 cut(s) 303, 652
HpySE526I ACGT 3 cut(s) 167, 236, 864
Hsp92II CATG 3 cut(s) 14, 161, 476
HspAI GCGC 2 cut(s) 173, 242
Kpn2I TCCGGA 1 cut(s) 64
Kzo9I GATC 6 cut(s) 24, 160, 270, 276, 289, 576
LmnI GCTCC 2 cut(s) 380, 487
Lsp1109I GCAGC 1 cut(s) 686
LweI GCATC 4 cut(s) 70, 304, 631, 639
MaeI CTAG 2 cut(s) 287, 459
MaeII ACGT 3 cut(s) 167, 236, 864
MaeIII GTNAC 2 cut(s) 385, 848
MalI GATC 6 cut(s) 26, 162, 272, 278, 291, 578
MboI GATC 6 cut(s) 24, 160, 270, 276, 289, 576
MboII GAAGA 3 cut(s) 436, 563, 605
MflI RGATCY 1 cut(s) 24
MluCI AATT 3 cut(s) 213, 799, 856
MlyI GAGTC 1 cut(s) 512
MmeI TCCRAC 2 cut(s) 188, 257
MnlI CCTC 4 cut(s) 248, 568, 583, 613
Mph1103I ATGCAT 1 cut(s) 632
MroI TCCGGA 1 cut(s) 64
MroXI GAANNNNTTC 1 cut(s) 467
MseI TTAA 5 cut(s) 15, 249, 408, 444, 776
MslI CAYNNNNRTG 1 cut(s) 150
MspA1I CMGCKG 1 cut(s) 613
MspI CCGG 2 cut(s) 65, 378
MspR9I CCNGG 2 cut(s) 379, 696
MvaI CCWGG 1 cut(s) 696
MwoI GCNNNNNNNGC 2 cut(s) 53, 181
NciI CCSGG 1 cut(s) 379
NdeI CATATG 1 cut(s) 147
NdeII GATC 6 cut(s) 24, 160, 270, 276, 289, 576
NlaIII CATG 3 cut(s) 14, 161, 476
NlaIV GGNNCC 3 cut(s) 26, 376, 887
NsiI ATGCAT 1 cut(s) 632
NspI RCATGY 1 cut(s) 14
PagI TCATGA 1 cut(s) 157
PcsI WCGNNNNNNNCGW 1 cut(s) 585
PdmI GAANNNNTTC 1 cut(s) 467
PfeI GAWTC 2 cut(s) 263, 839
PfoI TCCNGGA 1 cut(s) 377
PkrI GCNGC 2 cut(s) 108, 701
Ple19I CGATCG 1 cut(s) 279
PleI GAGTC 1 cut(s) 511
PpsI GAGTC 1 cut(s) 511
PpuMI RGGWCCY 1 cut(s) 886
PsiI TTATAA 2 cut(s) 218, 228
Psp1406I AACGTT 2 cut(s) 167, 236
Psp5II RGGWCCY 1 cut(s) 886
Psp6I CCWGG 1 cut(s) 694
PspEI GGTNACC 1 cut(s) 385
PspFI CCCAGC 1 cut(s) 52
PspGI CCWGG 1 cut(s) 694
PspN4I GGNNCC 3 cut(s) 26, 376, 887
PspPI GGNCC 1 cut(s) 886
PspPPI RGGWCCY 1 cut(s) 886
PsrI GAACNNNNNNTAC 4 cut(s) 701, 733, 805, 837
PstNI CAGNNNCTG 1 cut(s) 455
PsuI RGATCY 1 cut(s) 24
PvuI CGATCG 1 cut(s) 279
PvuII CAGCTG 1 cut(s) 613
RsaI GTAC 2 cut(s) 138, 207
RsaNI GTAC 2 cut(s) 137, 206
RseI CAYNNNNRTG 1 cut(s) 150
SaqAI TTAA 5 cut(s) 15, 249, 408, 444, 776
SatI GCNGC 2 cut(s) 107, 700
Sau3AI GATC 6 cut(s) 24, 160, 270, 276, 289, 576
Sau96I GGNCC 1 cut(s) 886
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 2 cut(s) 379, 696
SfaNI GCATC 4 cut(s) 70, 304, 631, 639
SfcI CTRYAG 1 cut(s) 726
SinI GGWCC 1 cut(s) 886
SmiMI CAYNNNNRTG 1 cut(s) 150
Sse9I AATT 3 cut(s) 213, 799, 856
SsiI CCGC 2 cut(s) 107, 187
SspI AATATT 2 cut(s) 466, 648
SspMI CTAG 2 cut(s) 287, 459
StyD4I CCNGG 2 cut(s) 377, 694
StyI CCWWGG 1 cut(s) 390
TaaI ACNGT 1 cut(s) 432
TaiI ACGT 3 cut(s) 170, 239, 867
TaqI TCGA 2 cut(s) 6, 279
TaqII GACCGA 1 cut(s) 297
TasI AATT 3 cut(s) 213, 799, 856
TauI GCSGC 1 cut(s) 109
TfiI GAWTC 2 cut(s) 263, 839
Tru1I TTAA 5 cut(s) 15, 249, 408, 444, 776
Tru9I TTAA 5 cut(s) 15, 249, 408, 444, 776
TscAI CASTG 1 cut(s) 116
TseI GCWGC 1 cut(s) 699
TspDTI ATGAA 3 cut(s) 146, 164, 884
TspGWI ACGGA 1 cut(s) 528
TspRI CASTG 1 cut(s) 116
VpaK11BI GGWCC 1 cut(s) 886
XceI RCATGY 1 cut(s) 14
XmnI GAANNNNTTC 1 cut(s) 467
XspI CTAG 2 cut(s) 287, 459
Zsp2I ATGCAT 1 cut(s) 632
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.