FvH4_4g30602

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000064
Physical Location & Seq
Forward (+)
30134833 .. 30135960
1128 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g30602.t1

Sequence Viewer

Length: 1002 bp
ATGTCAAGAGCCTCGAGCAGTACCAGCTGCAACTTATTAAACCGAGAATGGGATAGTCTCCTTCTAGATGTTGTGTTTGAGATTCTTGATAAGTTGCTAGAACCTGCTGACCATGGTCGCTTTGCAGCCATTTGCAAACGCTTTCATTCTCTTGCGAAGGAGTACAACAAGGCAAACCGACACATCCGCCAACTTAACAAGGATCTTCTTCCTCCCCCCATGCTTTTGATACTTGAAGAATGCACCAGGGATGGTGTGACAATAGAACTTCAGCACCCTTTAAGGAAATCATCAACTAGTATTCGTCTCCCTGTCTTAAAACGAATTTCATTCGAAAAGGTTATACTATCTGGGGATCCGGCTCTGAATCCAGACAGTTATGTGGTTGGAGCAACACACGGTGAAAGTGATTTGGGGTTGCTGGCTTTCATCAAAGCAAGACAACAACACTGGACTTACATCCAGGTACCAATACCTCTTCGATGCGTTGACGCTATATTTTCTAAGAACCAAATCTATGCTCTAGGCCACAATGCAGAGATTGTGTTTGTGAATCTTGATAGCAACAGCTACAATGTGCCGGAAGCAAAGCTACTCACACGTCTAAAACGGAATATTTTTGGCCGCGGGTATCTTGTCGAGTCGACTAATGGAGACCTATTGTATATCGAAAAAGTACAAGATATTATGTGCTGGATTCAAGAATTCAAGGTTTACAAGGTGGTGTTCAGTGATGGAGATGGCTCCGTTATTGAGCAGCTACTTGAAACAACAAGCATTGGAGATGAAGCTTTATTTCTGGATGACAATCATGCAGTCTCTTTTTCGGTATCAAACTTTCCCAAGTGCCAGCCAAATTCCATATACTACAGCTCGAAGTTCAACTTAAGAGGTCCAAATGGTATGCCAACTTTCGTGTTCAACTTAAAAGATGAAACCATCACACAGAGTGGGGCGCTACATGGACTTTGGATTATGCCGTCTTATAATGGACTCTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

334

Amino Acids

37.6

Weight (kDa)

6.32

Isoelectric Point (pI)

45.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 87 - 308 1.6e-33 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 987
Acc36I ACCTGC 1 cut(s) 112
Acc65I GGTACC 1 cut(s) 466
AccB1I GGYRCC 1 cut(s) 466
AccI GTMKAC 1 cut(s) 644
AccII CGCG 1 cut(s) 627
AciI CCGC 3 cut(s) 187, 625, 627
AclWI GGATC 3 cut(s) 210, 350, 363
AcoI YGGCCR 1 cut(s) 622
AcsI RAATTY 3 cut(s) 324, 704, 856
AcuI CTGAAG 1 cut(s) 254
AdeI CACNNNGTG 2 cut(s) 401, 950
AfaI GTAC 4 cut(s) 22, 164, 468, 678
AfiI CCNNNNNNNGG 1 cut(s) 49
AflII CTTAAG 1 cut(s) 886
AflIII ACRYGT 1 cut(s) 599
AgsI TTSAA 6 cut(s) 236, 701, 709, 767, 883, 922
AhlI ACTAGT 1 cut(s) 296
AjiI CACGTC 1 cut(s) 602
AjnI CCWGG 2 cut(s) 245, 462
AluBI AGCT 6 cut(s) 27, 570, 592, 760, 791, 873
AluI AGCT 6 cut(s) 27, 570, 592, 760, 791, 873
Alw26I GTCTC 4 cut(s) 62, 311, 648, 823
AlwI GGATC 3 cut(s) 210, 350, 363
Ama87I CYCGRG 1 cut(s) 13
AoxI GGCC 2 cut(s) 526, 622
ApeKI GCWGC 3 cut(s) 27, 125, 757
ApoI RAATTY 3 cut(s) 324, 704, 856
Asp718I GGTACC 1 cut(s) 466
AspLEI GCGC 1 cut(s) 958
AspS9I GGNCC 1 cut(s) 893
AsuHPI GGTGA 1 cut(s) 413
AsuII TTCGAA 1 cut(s) 333
AvaI CYCGRG 1 cut(s) 13
AvaII GGWCC 1 cut(s) 893
BamHI GGATCC 1 cut(s) 355
BanI GGYRCC 1 cut(s) 466
BarI GAAGNNNNNNTAC 2 cut(s) 576, 608
BbvI GCAGC 3 cut(s) 14, 137, 769
BccI CCATC 4 cut(s) 245, 728, 734, 947
BceAI ACGGC 1 cut(s) 964
BciT130I CCWGG 2 cut(s) 247, 464
BcoDI GTCTC 4 cut(s) 62, 311, 648, 823
BcuI ACTAGT 1 cut(s) 296
BfaI CTAG 5 cut(s) 65, 98, 297, 524, 1000
BfmI CTRYAG 1 cut(s) 868
BfoI RGCGCY 1 cut(s) 959
BfrI CTTAAG 1 cut(s) 886
BfuAI ACCTGC 1 cut(s) 112
BisI GCNGC 4 cut(s) 28, 126, 625, 758
BlsI GCNGC 4 cut(s) 29, 127, 626, 759
Bme1390I CCNGG 2 cut(s) 247, 464
Bme18I GGWCC 1 cut(s) 893
BmeT110I CYCGRG 1 cut(s) 13
BmgBI CACGTC 1 cut(s) 602
BmgT120I GGNCC 1 cut(s) 893
BmiI GGNNCC 3 cut(s) 357, 468, 745
BmrFI CCNGG 2 cut(s) 247, 464
BmsI GCATC 1 cut(s) 473
BoxI GACNNNNGTC 1 cut(s) 114
Bpu14I TTCGAA 1 cut(s) 333
BsaBI GATNNNNATC 1 cut(s) 807
BsaI GGTCTC 1 cut(s) 648
BsaJI CCNNGG 3 cut(s) 112, 246, 625
Bsc4I CCNNNNNNNGG 1 cut(s) 49
Bse1I ACTGG 1 cut(s) 455
Bse8I GATNNNNATC 1 cut(s) 807
BseBI CCWGG 2 cut(s) 247, 464
BseDI CCNNGG 3 cut(s) 112, 246, 625
BseGI GGATG 4 cut(s) 183, 256, 459, 808
BseJI GATNNNNATC 1 cut(s) 807
BseLI CCNNNNNNNGG 1 cut(s) 49
BseNI ACTGG 1 cut(s) 455
BseXI GCAGC 3 cut(s) 14, 137, 769
Bsh1236I CGCG 1 cut(s) 627
BshFI GGCC 2 cut(s) 528, 624
BshNI GGYRCC 1 cut(s) 466
BsiHKCI CYCGRG 1 cut(s) 13
BsiSI CCGG 2 cut(s) 359, 581
BslI CCNNNNNNNGG 1 cut(s) 49
BsmAI GTCTC 4 cut(s) 62, 311, 648, 823
BsmBI CGTCTC 1 cut(s) 311
BsmI GAATGC 1 cut(s) 245
BsnI GGCC 2 cut(s) 528, 624
Bso31I GGTCTC 1 cut(s) 648
BsoBI CYCGRG 1 cut(s) 13
Bsp119I TTCGAA 1 cut(s) 333
Bsp143I GATC 2 cut(s) 202, 355
Bsp19I CCATGG 1 cut(s) 112
BspACI CCGC 3 cut(s) 187, 625, 627
BspANI GGCC 2 cut(s) 528, 624
BspFNI CGCG 1 cut(s) 627
BspLI GGNNCC 3 cut(s) 357, 468, 745
BspMI ACCTGC 1 cut(s) 112
BspPI GGATC 3 cut(s) 210, 350, 363
BspT104I TTCGAA 1 cut(s) 333
BspT107I GGYRCC 1 cut(s) 466
BspTI CTTAAG 1 cut(s) 886
BspTNI GGTCTC 1 cut(s) 648
BsrI ACTGG 1 cut(s) 455
BssECI CCNNGG 3 cut(s) 112, 246, 625
BssMI GATC 2 cut(s) 202, 355
BssT1I CCWWGG 1 cut(s) 112
Bst2UI CCWGG 2 cut(s) 247, 464
Bst4CI ACNGT 2 cut(s) 377, 401
Bst6I CTCTTC 1 cut(s) 483
BstAFI CTTAAG 1 cut(s) 886
BstBI TTCGAA 1 cut(s) 333
BstC8I GCNNGC 2 cut(s) 423, 851
BstDEI CTNAG 1 cut(s) 504
BstDSI CCRYGG 2 cut(s) 112, 625
BstF5I GGATG 4 cut(s) 183, 256, 459, 808
BstFNI CGCG 1 cut(s) 627
BstH2I RGCGCY 1 cut(s) 959
BstHHI GCGC 1 cut(s) 958
BstKTI GATC 2 cut(s) 205, 358
BstMAI GTCTC 4 cut(s) 62, 311, 648, 823
BstMBI GATC 2 cut(s) 202, 355
BstMWI GCNNNNNNNGC 1 cut(s) 24
BstNI CCWGG 2 cut(s) 247, 464
BstPAI GACNNNNGTC 1 cut(s) 114
BstSCI CCNGG 2 cut(s) 245, 462
BstSFI CTRYAG 1 cut(s) 868
BstUI CGCG 1 cut(s) 627
BstV1I GCAGC 3 cut(s) 14, 137, 769
BstX2I RGATCY 2 cut(s) 202, 355
BstYI RGATCY 2 cut(s) 202, 355
BsuRI GGCC 2 cut(s) 528, 624
BtgI CCRYGG 2 cut(s) 112, 625
BtrI CACGTC 1 cut(s) 602
BtsCI GGATG 4 cut(s) 183, 256, 459, 808
BtsIMutI CAGTG 2 cut(s) 448, 736
BveI ACCTGC 1 cut(s) 112
Cac8I GCNNGC 2 cut(s) 423, 851
CfoI GCGC 1 cut(s) 958
Cfr13I GGNCC 1 cut(s) 893
Cfr42I CCGCGG 1 cut(s) 628
CseI GACGC 1 cut(s) 500
Csp6I GTAC 4 cut(s) 21, 163, 467, 677
CviAII CATG 4 cut(s) 113, 220, 812, 962
CviQI GTAC 4 cut(s) 21, 163, 467, 677
DdeI CTNAG 1 cut(s) 504
DpnI GATC 2 cut(s) 204, 357
DpnII GATC 2 cut(s) 202, 355
DraIII CACNNNGTG 2 cut(s) 401, 950
EaeI YGGCCR 1 cut(s) 622
Eam1104I CTCTTC 1 cut(s) 483
EarI CTCTTC 1 cut(s) 483
EciI GGCGGA 1 cut(s) 176
Eco130I CCWWGG 1 cut(s) 112
Eco31I GGTCTC 1 cut(s) 648
Eco47I GGWCC 1 cut(s) 893
Eco57I CTGAAG 1 cut(s) 254
Eco88I CYCGRG 1 cut(s) 13
EcoRI GAATTC 1 cut(s) 704
EcoRII CCWGG 2 cut(s) 245, 462
EcoT14I CCWWGG 1 cut(s) 112
ErhI CCWWGG 1 cut(s) 112
Esp3I CGTCTC 1 cut(s) 311
FaeI CATG 4 cut(s) 116, 223, 815, 965
FalI AAGNNNNNCTT 2 cut(s) 869, 901
FatI CATG 4 cut(s) 112, 219, 811, 961
FauI CCCGC 1 cut(s) 620
FblI GTMKAC 1 cut(s) 644
Fnu4HI GCNGC 4 cut(s) 28, 126, 625, 758
FokI GGATG 4 cut(s) 170, 263, 446, 815
Fsp4HI GCNGC 4 cut(s) 28, 126, 625, 758
FspBI CTAG 5 cut(s) 65, 98, 297, 524, 1000
GlaI GCGC 1 cut(s) 957
GluI GCNGC 4 cut(s) 28, 126, 625, 758
HaeII RGCGCY 1 cut(s) 959
HaeIII GGCC 2 cut(s) 528, 624
HapII CCGG 2 cut(s) 359, 581
HgaI GACGC 1 cut(s) 500
HhaI GCGC 1 cut(s) 958
Hin1II CATG 4 cut(s) 116, 223, 815, 965
Hin6I GCGC 1 cut(s) 956
HinP1I GCGC 1 cut(s) 956
HincII GTYRAC 2 cut(s) 490, 645
HindII GTYRAC 2 cut(s) 490, 645
HindIII AAGCTT 1 cut(s) 789
HinfI GANTC 6 cut(s) 82, 367, 553, 641, 697, 993
HpaII CCGG 2 cut(s) 359, 581
HphI GGTGA 1 cut(s) 413
Hpy166II GTNNAC 3 cut(s) 490, 645, 715
Hpy188I TCNGA 1 cut(s) 366
Hpy188III TCNNGA 7 cut(s) 6, 65, 86, 371, 557, 701, 800
Hpy8I GTNNAC 3 cut(s) 490, 645, 715
HpyAV CCTTC 2 cut(s) 71, 151
HpyCH4III ACNGT 2 cut(s) 377, 401
HpyCH4IV ACGT 1 cut(s) 601
HpyCH4V TGCA 6 cut(s) 30, 125, 135, 243, 536, 815
HpyF10VI GCNNNNNNNGC 1 cut(s) 24
HpyF3I CTNAG 1 cut(s) 504
HpySE526I ACGT 1 cut(s) 601
Hsp92II CATG 4 cut(s) 116, 223, 815, 965
HspAI GCGC 1 cut(s) 956
KpnI GGTACC 1 cut(s) 470
KspI CCGCGG 1 cut(s) 628
Kzo9I GATC 2 cut(s) 202, 355
LmnI GCTCC 2 cut(s) 389, 749
Lsp1109I GCAGC 3 cut(s) 14, 137, 769
LweI GCATC 1 cut(s) 473
MaeI CTAG 5 cut(s) 65, 98, 297, 524, 1000
MaeII ACGT 1 cut(s) 601
MaeIII GTNAC 1 cut(s) 256
MalI GATC 2 cut(s) 204, 357
MboI GATC 2 cut(s) 202, 355
MboII GAAGA 4 cut(s) 197, 200, 248, 470
MflI RGATCY 2 cut(s) 202, 355
MluCI AATT 3 cut(s) 324, 704, 856
MlyI GAGTC 2 cut(s) 650, 987
MmeI TCCRAC 1 cut(s) 367
MnlI CCTC 4 cut(s) 22, 222, 486, 884
MseI TTAA 6 cut(s) 38, 195, 281, 317, 887, 926
MspA1I CMGCKG 2 cut(s) 27, 627
MspCI CTTAAG 1 cut(s) 886
MspI CCGG 2 cut(s) 359, 581
MspR9I CCNGG 2 cut(s) 247, 464
Mva1269I GAATGC 1 cut(s) 245
MvaI CCWGG 2 cut(s) 247, 464
MvnI CGCG 1 cut(s) 627
MwoI GCNNNNNNNGC 1 cut(s) 24
NcoI CCATGG 1 cut(s) 112
NdeII GATC 2 cut(s) 202, 355
NlaIII CATG 4 cut(s) 116, 223, 815, 965
NlaIV GGNNCC 3 cut(s) 357, 468, 745
NmuCI GTSAC 1 cut(s) 256
NspV TTCGAA 1 cut(s) 333
PaeR7I CTCGAG 1 cut(s) 13
PctI GAATGC 1 cut(s) 245
PfeI GAWTC 4 cut(s) 82, 367, 553, 697
PkrI GCNGC 4 cut(s) 29, 127, 626, 759
PleI GAGTC 2 cut(s) 649, 987
PpsI GAGTC 2 cut(s) 649, 987
PshAI GACNNNNGTC 1 cut(s) 114
PsiI TTATAA 1 cut(s) 987
Psp6I CCWGG 2 cut(s) 245, 462
PspGI CCWGG 2 cut(s) 245, 462
PspN4I GGNNCC 3 cut(s) 357, 468, 745
PspPI GGNCC 1 cut(s) 893
PspXI VCTCGAGB 1 cut(s) 13
PsuI RGATCY 2 cut(s) 202, 355
PvuII CAGCTG 1 cut(s) 27
RsaI GTAC 4 cut(s) 22, 164, 468, 678
RsaNI GTAC 4 cut(s) 21, 163, 467, 677
SacII CCGCGG 1 cut(s) 628
SalI GTCGAC 1 cut(s) 643
SaqAI TTAA 6 cut(s) 38, 195, 281, 317, 887, 926
SatI GCNGC 4 cut(s) 28, 126, 625, 758
Sau3AI GATC 2 cut(s) 202, 355
Sau96I GGNCC 1 cut(s) 893
SchI GAGTC 2 cut(s) 650, 987
ScrFI CCNGG 2 cut(s) 247, 464
SfaNI GCATC 1 cut(s) 473
SfcI CTRYAG 1 cut(s) 868
Sfr274I CTCGAG 1 cut(s) 13
Sfr303I CCGCGG 1 cut(s) 628
SfuI TTCGAA 1 cut(s) 333
SgrBI CCGCGG 1 cut(s) 628
SinI GGWCC 1 cut(s) 893
SlaI CTCGAG 1 cut(s) 13
SmlI CTYRAG 2 cut(s) 13, 886
SmoI CTYRAG 2 cut(s) 13, 886
SpeI ACTAGT 1 cut(s) 296
Sse9I AATT 3 cut(s) 324, 704, 856
SsiI CCGC 3 cut(s) 187, 625, 627
SspI AATATT 1 cut(s) 616
SspMI CTAG 5 cut(s) 65, 98, 297, 524, 1000
StyD4I CCNGG 2 cut(s) 245, 462
StyI CCWWGG 1 cut(s) 112
TaaI ACNGT 2 cut(s) 377, 401
TaiI ACGT 1 cut(s) 604
TaqI TCGA 7 cut(s) 14, 333, 481, 639, 644, 669, 875
TasI AATT 3 cut(s) 324, 704, 856
TatI WGTACW 2 cut(s) 162, 676
TauI GCSGC 1 cut(s) 627
TfiI GAWTC 4 cut(s) 82, 367, 553, 697
Tru1I TTAA 6 cut(s) 38, 195, 281, 317, 887, 926
Tru9I TTAA 6 cut(s) 38, 195, 281, 317, 887, 926
TscAI CASTG 2 cut(s) 455, 736
TseFI GTSAC 1 cut(s) 256
TseI GCWGC 3 cut(s) 27, 125, 757
Tsp45I GTSAC 1 cut(s) 256
TspDTI ATGAA 5 cut(s) 134, 318, 418, 801, 948
TspGWI ACGGA 2 cut(s) 625, 736
TspRI CASTG 2 cut(s) 455, 736
Vha464I CTTAAG 1 cut(s) 886
VpaK11BI GGWCC 1 cut(s) 893
XapI RAATTY 3 cut(s) 324, 704, 856
XbaI TCTAGA 1 cut(s) 64
XhoI CTCGAG 1 cut(s) 13
XmiI GTMKAC 1 cut(s) 644
XspI CTAG 5 cut(s) 65, 98, 297, 524, 1000
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.