RchiOBHm_Chr4g0442931

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000064
Physical Location & Seq
Forward (+)
64340382 .. 64342756
2375 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ41066

Sequence Viewer

Length: 1002 bp
ATGGTTTATAGCCTTTCGGAAGGAGAAACCTATACAAACGTCCAATTACCGGTGCCTTATGATAGGAGGTGCTGTGGCTCCAGCCATGGTTGGTTGGCCACAGCACACGAGAATTTCGCCATAACTCTTTTGAATCCTTTCAGAAAAGCAGCGGCCATTCATTTGCCTCCCTTGACAACCCCACATAATCTCCGAGACTACCAATTTGGGTTACAGAAGTTCCAGGATCAGTTGAAGAAGCGCTACGACTATTATGTCTGTAAGGTTATATTATCTGCTGACCCGTCTTTGAATCCGCATAATTATGTGGTTGTGGCAACCTACGACTATTGTTGCAGGTTGGCTTTCATTAAAGCAGGACAAAGAGATTGGACTTATGTCGAGAAAACATATATGTTTTCTGATGCTATTTTTCACAGAAATGAAATTTATGCAGTTGGACTAGGGGGAATAATTGCGTCAGTTGATGTCAATAGTAGTAATGATCCTTCGCGGCCGCCAAAAGCAATTCCACTTACACGTTTACGACCAATGGAACACCCTCTGTTCCCATACAAAGCAGATAAGGCATATCTTGTTGAATCAACCAATGGAGACTTGCTGCATGTTCGAAGGTTTTTGAAACGAAAGGAAGGTCTTGATCAAAAGCTGGGGGTTATCAATTTTGTGGTATACAAGGTGTTATTCATCGACAACGATGGGACCTTTGTGAGGCAGGATCTGATAGACAGCATTGGGGATGATGCTTTGTTCTTGGGTGATAATCATTCAATATCTGTTTCGGCTTCAAATTTTCCTAGGTGCCAACCAAATTCCATCTACTTCACAAATGACATTATGAAGGGTGGTATGGGTATCTTCAATTTAGCAGACAAGACCGCCACACAACACTACCCTCTAAATCCCAGTGAGAGTGCACAAATGGAATATATTGCTGTGCTTGTGCCATCTGAAGATTGCATCTCCCCTGGCTTAGTGGAGTTGAAGAGAATTCGAAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

333

Amino Acids

37.72

Weight (kDa)

7.13

Isoelectric Point (pI)

36.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 2 - 288 1.5e-53 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 254
Acc36I ACCTGC 1 cut(s) 327
AccB1I GGYRCC 2 cut(s) 52, 801
AccI GTMKAC 1 cut(s) 672
AccII CGCG 1 cut(s) 493
AciI CCGC 5 cut(s) 152, 296, 493, 497, 879
AclWI GGATC 3 cut(s) 234, 479, 726
AcoI YGGCCR 3 cut(s) 96, 153, 494
AcsI RAATTY 5 cut(s) 112, 426, 790, 811, 990
AcuI CTGAAG 1 cut(s) 972
AfeI AGCGCT 1 cut(s) 242
AfiI CCNNNNNNNGG 2 cut(s) 49, 711
AflIII ACRYGT 1 cut(s) 518
AgeI ACCGGT 1 cut(s) 49
AgsI TTSAA 9 cut(s) 133, 235, 292, 581, 622, 771, 789, 862, 985
AjnI CCWGG 2 cut(s) 222, 967
AluBI AGCT 1 cut(s) 649
AluI AGCT 1 cut(s) 649
Alw21I GWGCWC 1 cut(s) 919
Alw26I GTCTC 2 cut(s) 189, 588
Alw44I GTGCAC 1 cut(s) 915
AlwI GGATC 3 cut(s) 234, 479, 726
AlwNI CAGNNNCTG 1 cut(s) 721
Aor51HI AGCGCT 1 cut(s) 242
AoxI GGCC 3 cut(s) 96, 153, 494
ApaLI GTGCAC 1 cut(s) 915
ApeKI GCWGC 2 cut(s) 149, 601
ApoI RAATTY 5 cut(s) 112, 426, 790, 811, 990
ArsI GACNNNNNNTTYG 4 cut(s) 188, 220, 619, 651
AsiGI ACCGGT 1 cut(s) 49
Asp700I GAANNNNTTC 1 cut(s) 137
AspA2I CCTAGG 1 cut(s) 797
AspLEI GCGC 1 cut(s) 243
AspS9I GGNCC 1 cut(s) 702
AsuHPI GGTGA 1 cut(s) 770
AsuII TTCGAA 2 cut(s) 610, 994
AvaII GGWCC 1 cut(s) 702
AvrII CCTAGG 1 cut(s) 797
BaeGI GKGCMC 1 cut(s) 919
BalI TGGCCA 1 cut(s) 98
BanI GGYRCC 2 cut(s) 52, 801
BarI GAAGNNNNNNTAC 4 cut(s) 227, 259, 472, 504
BauI CACGAG 1 cut(s) 107
Bbv12I GWGCWC 1 cut(s) 919
BbvI GCAGC 2 cut(s) 161, 588
BccI CCATC 3 cut(s) 692, 824, 955
BciT130I CCWGG 2 cut(s) 224, 969
BclI TGATCA 1 cut(s) 640
BcoDI GTCTC 2 cut(s) 189, 588
BfaI CTAG 2 cut(s) 443, 798
BfoI RGCGCY 1 cut(s) 244
BfuAI ACCTGC 1 cut(s) 327
BisI GCNGC 5 cut(s) 150, 153, 494, 497, 602
BlnI CCTAGG 1 cut(s) 797
BlsI GCNGC 5 cut(s) 151, 154, 495, 498, 603
Bme1390I CCNGG 2 cut(s) 224, 969
Bme18I GGWCC 1 cut(s) 702
BmgT120I GGNCC 1 cut(s) 702
BmiI GGNNCC 4 cut(s) 54, 79, 703, 803
BmrFI CCNGG 2 cut(s) 224, 969
BmrI ACTGGG 1 cut(s) 900
BmsI GCATC 3 cut(s) 394, 733, 969
BmuI ACTGGG 1 cut(s) 900
BoxI GACNNNNGTC 1 cut(s) 377
BpmI CTGGAG 1 cut(s) 64
Bpu14I TTCGAA 2 cut(s) 610, 994
BsaJI CCNNGG 3 cut(s) 85, 797, 967
BsaWI WCCGGW 1 cut(s) 49
BsaXI ACNNNNNCTCC 4 cut(s) 58, 88, 174, 204
Bsc4I CCNNNNNNNGG 2 cut(s) 49, 711
Bse118I RCCGGY 1 cut(s) 49
Bse1I ACTGG 1 cut(s) 906
BseBI CCWGG 2 cut(s) 224, 969
BseDI CCNNGG 3 cut(s) 85, 797, 967
BseGI GGATG 1 cut(s) 745
BseLI CCNNNNNNNGG 2 cut(s) 49, 711
BseNI ACTGG 1 cut(s) 906
BseSI GKGCMC 1 cut(s) 919
BseX3I CGGCCG 1 cut(s) 494
BseXI GCAGC 2 cut(s) 161, 588
BseYI CCCAGC 1 cut(s) 649
Bsh1236I CGCG 1 cut(s) 493
Bsh1285I CGRYCG 1 cut(s) 497
BshFI GGCC 3 cut(s) 98, 155, 496
BshNI GGYRCC 2 cut(s) 52, 801
BshTI ACCGGT 1 cut(s) 49
BsiEI CGRYCG 1 cut(s) 497
BsiHKAI GWGCWC 1 cut(s) 919
BsiSI CCGG 1 cut(s) 50
BslFI GGGAC 1 cut(s) 715
BslI CCNNNNNNNGG 2 cut(s) 49, 711
BsmAI GTCTC 2 cut(s) 189, 588
BsmFI GGGAC 1 cut(s) 715
BsnI GGCC 3 cut(s) 98, 155, 496
Bsp119I TTCGAA 2 cut(s) 610, 994
Bsp1286I GDGCHC 1 cut(s) 919
Bsp143I GATC 4 cut(s) 226, 484, 640, 718
Bsp19I CCATGG 1 cut(s) 85
BspACI CCGC 5 cut(s) 152, 296, 493, 497, 879
BspANI GGCC 3 cut(s) 98, 155, 496
BspFNI CGCG 1 cut(s) 493
BspLI GGNNCC 4 cut(s) 54, 79, 703, 803
BspMI ACCTGC 1 cut(s) 327
BspPI GGATC 3 cut(s) 234, 479, 726
BspT104I TTCGAA 2 cut(s) 610, 994
BspT107I GGYRCC 2 cut(s) 52, 801
BsrFI RCCGGY 1 cut(s) 49
BsrI ACTGG 1 cut(s) 906
BssAI RCCGGY 1 cut(s) 49
BssECI CCNNGG 3 cut(s) 85, 797, 967
BssMI GATC 4 cut(s) 226, 484, 640, 718
BssNAI GTATAC 1 cut(s) 673
BssSI CACGAG 1 cut(s) 107
BssT1I CCWWGG 2 cut(s) 85, 797
Bst1107I GTATAC 1 cut(s) 673
Bst2BI CACGAG 1 cut(s) 107
Bst2UI CCWGG 2 cut(s) 224, 969
Bst6I CTCTTC 1 cut(s) 980
BstBI TTCGAA 2 cut(s) 610, 994
BstDEI CTNAG 1 cut(s) 973
BstDSI CCRYGG 1 cut(s) 85
BstENI CCTNNNNNAGG 1 cut(s) 709
BstF5I GGATG 1 cut(s) 745
BstFNI CGCG 1 cut(s) 493
BstH2I RGCGCY 1 cut(s) 244
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 4 cut(s) 229, 487, 643, 721
BstMAI GTCTC 2 cut(s) 189, 588
BstMBI GATC 4 cut(s) 226, 484, 640, 718
BstMCI CGRYCG 1 cut(s) 497
BstMWI GCNNNNNNNGC 1 cut(s) 566
BstNI CCWGG 2 cut(s) 224, 969
BstNSI RCATGY 1 cut(s) 608
BstPAI GACNNNNGTC 1 cut(s) 377
BstSCI CCNGG 2 cut(s) 222, 967
BstSLI GKGCMC 1 cut(s) 919
BstUI CGCG 1 cut(s) 493
BstV1I GCAGC 2 cut(s) 161, 588
BstX2I RGATCY 1 cut(s) 718
BstYI RGATCY 1 cut(s) 718
BstZ17I GTATAC 1 cut(s) 673
BstZI CGGCCG 1 cut(s) 494
BsuRI GGCC 3 cut(s) 98, 155, 496
BtgI CCRYGG 1 cut(s) 85
BtsCI GGATG 1 cut(s) 745
BtsIMutI CAGTG 1 cut(s) 913
BveI ACCTGC 1 cut(s) 327
CaiI CAGNNNCTG 1 cut(s) 721
CciNI GCGGCCGC 1 cut(s) 494
CfoI GCGC 1 cut(s) 243
Cfr10I RCCGGY 1 cut(s) 49
Cfr13I GGNCC 1 cut(s) 702
CseI GACGC 1 cut(s) 447
CspAI ACCGGT 1 cut(s) 49
CviAII CATG 2 cut(s) 86, 605
DdeI CTNAG 1 cut(s) 973
DpnI GATC 4 cut(s) 228, 486, 642, 720
DpnII GATC 4 cut(s) 226, 484, 640, 718
DrdI GACNNNNNNGTC 1 cut(s) 254
DseDI GACNNNNNNGTC 1 cut(s) 254
EaeI YGGCCR 3 cut(s) 96, 153, 494
EagI CGGCCG 1 cut(s) 494
Eam1104I CTCTTC 1 cut(s) 980
EarI CTCTTC 1 cut(s) 980
EclXI CGGCCG 1 cut(s) 494
Eco130I CCWWGG 2 cut(s) 85, 797
Eco47I GGWCC 1 cut(s) 702
Eco47III AGCGCT 1 cut(s) 242
Eco52I CGGCCG 1 cut(s) 494
Eco57I CTGAAG 1 cut(s) 972
EcoNI CCTNNNNNAGG 1 cut(s) 709
EcoO109I RGGNCCY 1 cut(s) 702
EcoRI GAATTC 1 cut(s) 990
EcoRII CCWGG 2 cut(s) 222, 967
EcoT14I CCWWGG 2 cut(s) 85, 797
ErhI CCWWGG 2 cut(s) 85, 797
FaeI CATG 2 cut(s) 89, 608
FaqI GGGAC 1 cut(s) 715
FatI CATG 2 cut(s) 85, 604
FbaI TGATCA 1 cut(s) 640
FblI GTMKAC 1 cut(s) 672
Fnu4HI GCNGC 5 cut(s) 150, 153, 494, 497, 602
FokI GGATG 1 cut(s) 752
Fsp4HI GCNGC 5 cut(s) 150, 153, 494, 497, 602
FspBI CTAG 2 cut(s) 443, 798
GlaI GCGC 1 cut(s) 242
GluI GCNGC 5 cut(s) 150, 153, 494, 497, 602
GsaI CCCAGC 1 cut(s) 653
GsuI CTGGAG 1 cut(s) 64
HaeII RGCGCY 1 cut(s) 244
HaeIII GGCC 3 cut(s) 98, 155, 496
HapII CCGG 1 cut(s) 50
HgaI GACGC 1 cut(s) 447
HhaI GCGC 1 cut(s) 243
Hin1II CATG 2 cut(s) 89, 608
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HinfI GANTC 3 cut(s) 133, 292, 581
HpaII CCGG 1 cut(s) 50
HphI GGTGA 1 cut(s) 770
Hpy166II GTNNAC 3 cut(s) 524, 673, 917
Hpy188I TCNGA 6 cut(s) 19, 143, 194, 403, 723, 952
Hpy188III TCNNGA 2 cut(s) 382, 638
Hpy8I GTNNAC 3 cut(s) 524, 673, 917
HpyAV CCTTC 5 cut(s) 14, 498, 606, 626, 835
HpyCH4IV ACGT 2 cut(s) 39, 520
HpyCH4V TGCA 5 cut(s) 336, 434, 604, 917, 960
HpyF10VI GCNNNNNNNGC 1 cut(s) 566
HpyF3I CTNAG 1 cut(s) 973
HpySE526I ACGT 2 cut(s) 39, 520
Hsp92II CATG 2 cut(s) 89, 608
HspAI GCGC 1 cut(s) 241
Ksp22I TGATCA 1 cut(s) 640
Kzo9I GATC 4 cut(s) 226, 484, 640, 718
LmnI GCTCC 1 cut(s) 83
Lsp1109I GCAGC 2 cut(s) 161, 588
LweI GCATC 3 cut(s) 394, 733, 969
MaeI CTAG 2 cut(s) 443, 798
MaeII ACGT 2 cut(s) 39, 520
MaeIII GTNAC 1 cut(s) 210
MalI GATC 4 cut(s) 228, 486, 642, 720
MboI GATC 4 cut(s) 226, 484, 640, 718
MboII GAAGA 4 cut(s) 247, 850, 965, 997
MflI RGATCY 1 cut(s) 718
MhlI GDGCHC 1 cut(s) 919
MlsI TGGCCA 1 cut(s) 98
MluNI TGGCCA 1 cut(s) 98
MmeI TCCRAC 1 cut(s) 418
MnlI CCTC 5 cut(s) 60, 177, 552, 705, 906
Mox20I TGGCCA 1 cut(s) 98
MroXI GAANNNNTTC 1 cut(s) 137
MscI TGGCCA 1 cut(s) 98
MseI TTAA 1 cut(s) 351
MslI CAYNNNNRTG 2 cut(s) 303, 420
Msp20I TGGCCA 1 cut(s) 98
MspA1I CMGCKG 1 cut(s) 152
MspI CCGG 1 cut(s) 50
MspR9I CCNGG 2 cut(s) 224, 969
MvaI CCWGG 2 cut(s) 224, 969
MvnI CGCG 1 cut(s) 493
MwoI GCNNNNNNNGC 1 cut(s) 566
NcoI CCATGG 1 cut(s) 85
NdeII GATC 4 cut(s) 226, 484, 640, 718
NlaIII CATG 2 cut(s) 89, 608
NlaIV GGNNCC 4 cut(s) 54, 79, 703, 803
NotI GCGGCCGC 1 cut(s) 494
NspI RCATGY 1 cut(s) 608
NspV TTCGAA 2 cut(s) 610, 994
PdmI GAANNNNTTC 1 cut(s) 137
PfeI GAWTC 3 cut(s) 133, 292, 581
PfoI TCCNGGA 1 cut(s) 222
PinAI ACCGGT 1 cut(s) 49
PkrI GCNGC 5 cut(s) 151, 154, 495, 498, 603
PpuMI RGGWCCY 1 cut(s) 702
PshAI GACNNNNGTC 1 cut(s) 377
Psp5II RGGWCCY 1 cut(s) 702
Psp6I CCWGG 2 cut(s) 222, 967
PspFI CCCAGC 1 cut(s) 649
PspGI CCWGG 2 cut(s) 222, 967
PspN4I GGNNCC 4 cut(s) 54, 79, 703, 803
PspPI GGNCC 1 cut(s) 702
PspPPI RGGWCCY 1 cut(s) 702
PstNI CAGNNNCTG 1 cut(s) 721
PsuI RGATCY 1 cut(s) 718
RseI CAYNNNNRTG 2 cut(s) 303, 420
SaqAI TTAA 1 cut(s) 351
SatI GCNGC 5 cut(s) 150, 153, 494, 497, 602
Sau3AI GATC 4 cut(s) 226, 484, 640, 718
Sau96I GGNCC 1 cut(s) 702
ScrFI CCNGG 2 cut(s) 224, 969
SduI GDGCHC 1 cut(s) 919
SfaNI GCATC 3 cut(s) 394, 733, 969
SfuI TTCGAA 2 cut(s) 610, 994
SinI GGWCC 1 cut(s) 702
SmiMI CAYNNNNRTG 2 cut(s) 303, 420
SsiI CCGC 5 cut(s) 152, 296, 493, 497, 879
SspMI CTAG 2 cut(s) 443, 798
StyD4I CCNGG 2 cut(s) 222, 967
StyI CCWWGG 2 cut(s) 85, 797
TaiI ACGT 2 cut(s) 42, 523
TaqI TCGA 4 cut(s) 381, 610, 690, 994
TauI GCSGC 3 cut(s) 155, 496, 499
TfiI GAWTC 3 cut(s) 133, 292, 581
Tru1I TTAA 1 cut(s) 351
Tru9I TTAA 1 cut(s) 351
TscAI CASTG 1 cut(s) 913
TseI GCWGC 2 cut(s) 149, 601
TspDTI ATGAA 5 cut(s) 149, 337, 438, 676, 854
TspRI CASTG 1 cut(s) 913
VneI GTGCAC 1 cut(s) 915
VpaK11BI GGWCC 1 cut(s) 702
XagI CCTNNNNNAGG 1 cut(s) 709
XapI RAATTY 5 cut(s) 112, 426, 790, 811, 990
XceI RCATGY 1 cut(s) 608
XmaJI CCTAGG 1 cut(s) 797
XmiI GTMKAC 1 cut(s) 672
XmnI GAANNNNTTC 1 cut(s) 137
XspI CTAG 2 cut(s) 443, 798
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.