Rh5BG034900

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5B
OG0000064
Physical Location & Seq
Forward (+)
2425623 .. 2426651
1029 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5BG034900.1

Sequence Viewer

Length: 1029 bp
ATGTTCGTTTGGCTGTCGTTTGCAAGGAATGGCATTCTGTTTCAGAAGAGTATAATCATGCAACCCAGCGCTGGTGCAAGGTACTTCCCATGCTCATGGTCCCCTTCCTTAGCCGAACAAAGCGAATGGTATCTAGCGTTTCCTAAGGAAAAGTCTACACATGTTCAATTACCAGTGCCTTATGATAGGAGGTGCAGCGGCTCTAGCCATGGTTGGTTGGCCACAGCAGATGAAAATGTCGCCATAACTTATAAATCCTTTCACAAAAGTGCTGCCTATTATTTTGCCTGCTTGGAGTTCGTCCCATCTCATTACGAGAGGCACTCAATTGAGTGCAAGAAGCAGTACGAGTATTATGTCCCAAAGGTTATCTTGTTTGCAGACCCTTGTTTGGAACCGGATAATTACGTGGTTGTGGCGATCTATGATTTTTGTTACCGGTTGGCTTTCATTAAAGCTGGACAGAAAAGTTGGACTTACATCAAGGATACTGTGGGGTTTTTTGATGTTGTTTTTTACAACAATCAAATCTACGCGGTTAAAAATGGGGGAGAAATTGTGTCACTGGATGTCAATAGCAGCAATGACCCTTCACGGCCGCCAAAAGTAAATGAAGTTACAGCACCTCTTCCATTATATAAGCATCATTTCTCATGCAGAGCAGATATGGCATGTCTTGTTGAATCAACCAGTGGAGATTTATTGCATGTTCGAAGGTTTTTAACACAAAAAGGTCTTTGGATTGACAGTTTCACGGATCATGGATCCATTGTGAAGCAGCTTGAGGTAGAAAGCATTGGAGATGATGCTTTGTTCTTGGGAGATAATCATTCAATCTCCATTTCGGCTTCATTATTTCCTAGGTGCCAACCAAACTCTATTTACTACACTAATGATACCATATGCACCCAGAAACGAGGTATGGTTATCTTCAATTTAGCAGACAAAACGGGCACACAACACTACCCTAGTGAGAGGTACATCCCACGAGCAATATGGATTGTGCCACCGTGCAATGGTCTTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

342

Amino Acids

38.97

Weight (kDa)

6.82

Isoelectric Point (pI)

42.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 46 - 312 1.6e-40 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 252
AccB1I GGYRCC 1 cut(s) 864
AccI GTMKAC 1 cut(s) 155
AccII CGCG 1 cut(s) 536
AciI CCGC 3 cut(s) 198, 536, 599
AclWI GGATC 3 cut(s) 759, 765, 772
AcoI YGGCCR 2 cut(s) 219, 596
AfaI GTAC 3 cut(s) 83, 347, 980
AfeI AGCGCT 1 cut(s) 70
AfiI CCNNNNNNNGG 3 cut(s) 71, 391, 1016
AflIII ACRYGT 1 cut(s) 160
AgeI ACCGGT 1 cut(s) 438
AgsI TTSAA 4 cut(s) 167, 683, 834, 934
AleI CACNNNNGTG 1 cut(s) 267
AluBI AGCT 2 cut(s) 458, 781
AluI AGCT 2 cut(s) 458, 781
AlwI GGATC 3 cut(s) 759, 765, 772
Aor51HI AGCGCT 1 cut(s) 70
AoxI GGCC 2 cut(s) 219, 596
ApeKI GCWGC 4 cut(s) 195, 272, 579, 778
AsiGI ACCGGT 1 cut(s) 438
AspA2I CCTAGG 1 cut(s) 860
AspLEI GCGC 1 cut(s) 71
AspS9I GGNCC 1 cut(s) 99
AsuII TTCGAA 1 cut(s) 712
AvaII GGWCC 1 cut(s) 99
AvrII CCTAGG 1 cut(s) 860
AxyI CCTNAGG 1 cut(s) 144
BaeGI GKGCMC 1 cut(s) 956
BalI TGGCCA 1 cut(s) 221
BamHI GGATCC 1 cut(s) 764
BanI GGYRCC 1 cut(s) 864
BauI CACGAG 1 cut(s) 987
BbvI GCAGC 4 cut(s) 207, 259, 591, 790
BccI CCATC 1 cut(s) 313
BceAI ACGGC 1 cut(s) 611
BciVI GTATCC 1 cut(s) 481
BfaI CTAG 5 cut(s) 134, 204, 861, 969, 1027
BfoI RGCGCY 1 cut(s) 72
BfuI GTATCC 1 cut(s) 481
BisI GCNGC 6 cut(s) 196, 199, 273, 580, 599, 779
BlnI CCTAGG 1 cut(s) 860
BlsI GCNGC 6 cut(s) 197, 200, 274, 581, 600, 780
Bme18I GGWCC 1 cut(s) 99
BmgT120I GGNCC 1 cut(s) 99
BmiI GGNNCC 4 cut(s) 101, 396, 766, 866
BmsI GCATC 2 cut(s) 652, 796
BplI GAGNNNNNCTC 2 cut(s) 308, 340
Bpu10I CCTNAGC 1 cut(s) 109
Bpu14I TTCGAA 1 cut(s) 712
BpuEI CTTGAG 1 cut(s) 803
BsaAI YACGTR 1 cut(s) 409
BsaJI CCNNGG 2 cut(s) 208, 860
BsaWI WCCGGW 2 cut(s) 397, 438
BsaXI ACNNNNNCTCC 2 cut(s) 543, 573
Bsc4I CCNNNNNNNGG 3 cut(s) 71, 391, 1016
Bse118I RCCGGY 1 cut(s) 438
Bse1I ACTGG 3 cut(s) 173, 570, 690
Bse21I CCTNAGG 1 cut(s) 144
Bse3DI GCAATG 2 cut(s) 589, 1021
BseDI CCNNGG 2 cut(s) 208, 860
BseGI GGATG 2 cut(s) 574, 981
BseLI CCNNNNNNNGG 3 cut(s) 71, 391, 1016
BseMI GCAATG 2 cut(s) 589, 1021
BseNI ACTGG 3 cut(s) 173, 570, 690
BseSI GKGCMC 1 cut(s) 956
BseX3I CGGCCG 1 cut(s) 596
BseXI GCAGC 4 cut(s) 207, 259, 591, 790
BseYI CCCAGC 1 cut(s) 65
BsgI GTGCAG 1 cut(s) 214
Bsh1236I CGCG 1 cut(s) 536
Bsh1285I CGRYCG 1 cut(s) 599
BshFI GGCC 2 cut(s) 221, 598
BshNI GGYRCC 1 cut(s) 864
BshTI ACCGGT 1 cut(s) 438
BsiEI CGRYCG 1 cut(s) 599
BsiSI CCGG 2 cut(s) 398, 439
BslFI GGGAC 3 cut(s) 85, 287, 344
BslI CCNNNNNNNGG 3 cut(s) 71, 391, 1016
BsmFI GGGAC 3 cut(s) 85, 287, 344
BsmI GAATGC 1 cut(s) 33
BsnI GGCC 2 cut(s) 221, 598
Bsp119I TTCGAA 1 cut(s) 712
Bsp1286I GDGCHC 1 cut(s) 956
Bsp143I GATC 3 cut(s) 420, 757, 764
Bsp19I CCATGG 1 cut(s) 208
BspACI CCGC 3 cut(s) 198, 536, 599
BspANI GGCC 2 cut(s) 221, 598
BspFNI CGCG 1 cut(s) 536
BspLI GGNNCC 4 cut(s) 101, 396, 766, 866
BspPI GGATC 3 cut(s) 759, 765, 772
BspT104I TTCGAA 1 cut(s) 712
BspT107I GGYRCC 1 cut(s) 864
BsrDI GCAATG 2 cut(s) 589, 1021
BsrFI RCCGGY 1 cut(s) 438
BsrI ACTGG 3 cut(s) 173, 570, 690
BssAI RCCGGY 1 cut(s) 438
BssECI CCNNGG 2 cut(s) 208, 860
BssMI GATC 3 cut(s) 420, 757, 764
BssSI CACGAG 1 cut(s) 987
BssT1I CCWWGG 2 cut(s) 208, 860
Bst2BI CACGAG 1 cut(s) 987
Bst4CI ACNGT 3 cut(s) 493, 749, 1011
Bst6I CTCTTC 2 cut(s) 41, 633
BstBAI YACGTR 1 cut(s) 409
BstBI TTCGAA 1 cut(s) 712
BstC8I GCNNGC 1 cut(s) 289
BstDEI CTNAG 2 cut(s) 109, 144
BstDSI CCRYGG 1 cut(s) 208
BstF5I GGATG 2 cut(s) 574, 981
BstFNI CGCG 1 cut(s) 536
BstH2I RGCGCY 1 cut(s) 72
BstHHI GCGC 1 cut(s) 71
BstKTI GATC 3 cut(s) 423, 760, 767
BstMBI GATC 3 cut(s) 420, 757, 764
BstMCI CGRYCG 1 cut(s) 599
BstMWI GCNNNNNNNGC 2 cut(s) 204, 668
BstNSI RCATGY 3 cut(s) 164, 675, 710
BstSLI GKGCMC 1 cut(s) 956
BstUI CGCG 1 cut(s) 536
BstV1I GCAGC 4 cut(s) 207, 259, 591, 790
BstX2I RGATCY 1 cut(s) 764
BstXI CCANNNNNNTGG 1 cut(s) 96
BstYI RGATCY 1 cut(s) 764
BstZI CGGCCG 1 cut(s) 596
Bsu36I CCTNAGG 1 cut(s) 144
BsuI GTATCC 1 cut(s) 481
BsuRI GGCC 2 cut(s) 221, 598
BtgI CCRYGG 1 cut(s) 208
BtsCI GGATG 2 cut(s) 574, 981
BtsIMutI CAGTG 3 cut(s) 180, 563, 697
Cac8I GCNNGC 1 cut(s) 289
CfoI GCGC 1 cut(s) 71
Cfr10I RCCGGY 1 cut(s) 438
Cfr13I GGNCC 1 cut(s) 99
Csp6I GTAC 3 cut(s) 82, 346, 979
CspAI ACCGGT 1 cut(s) 438
CviAII CATG 9 cut(s) 58, 90, 96, 161, 209, 654, 672, 707, 761
CviQI GTAC 3 cut(s) 82, 346, 979
DdeI CTNAG 2 cut(s) 109, 144
DpnI GATC 3 cut(s) 422, 759, 766
DpnII GATC 3 cut(s) 420, 757, 764
EaeI YGGCCR 2 cut(s) 219, 596
EagI CGGCCG 1 cut(s) 596
Eam1104I CTCTTC 2 cut(s) 41, 633
EarI CTCTTC 2 cut(s) 41, 633
EclXI CGGCCG 1 cut(s) 596
Eco130I CCWWGG 2 cut(s) 208, 860
Eco47I GGWCC 1 cut(s) 99
Eco47III AGCGCT 1 cut(s) 70
Eco52I CGGCCG 1 cut(s) 596
Eco81I CCTNAGG 1 cut(s) 144
EcoT14I CCWWGG 2 cut(s) 208, 860
ErhI CCWWGG 2 cut(s) 208, 860
FaeI CATG 9 cut(s) 61, 93, 99, 164, 212, 657, 675, 710, 764
FalI AAGNNNNNCTT 4 cut(s) 356, 388, 460, 492
FaqI GGGAC 3 cut(s) 85, 287, 344
FatI CATG 9 cut(s) 57, 89, 95, 160, 208, 653, 671, 706, 760
FauNDI CATATG 1 cut(s) 902
FblI GTMKAC 1 cut(s) 155
Fnu4HI GCNGC 6 cut(s) 196, 199, 273, 580, 599, 779
FokI GGATG 2 cut(s) 581, 968
Fsp4HI GCNGC 6 cut(s) 196, 199, 273, 580, 599, 779
FspBI CTAG 5 cut(s) 134, 204, 861, 969, 1027
GlaI GCGC 1 cut(s) 70
GluI GCNGC 6 cut(s) 196, 199, 273, 580, 599, 779
GsaI CCCAGC 1 cut(s) 69
HaeII RGCGCY 1 cut(s) 72
HaeIII GGCC 2 cut(s) 221, 598
HapII CCGG 2 cut(s) 398, 439
HhaI GCGC 1 cut(s) 71
Hin1II CATG 9 cut(s) 61, 93, 99, 164, 212, 657, 675, 710, 764
Hin6I GCGC 1 cut(s) 69
HinP1I GCGC 1 cut(s) 69
HinfI GANTC 1 cut(s) 683
HpaII CCGG 2 cut(s) 398, 439
Hpy166II GTNNAC 1 cut(s) 156
Hpy188I TCNGA 1 cut(s) 45
Hpy8I GTNNAC 1 cut(s) 156
HpyAV CCTTC 3 cut(s) 114, 600, 708
HpyCH4III ACNGT 3 cut(s) 493, 749, 1011
HpyCH4IV ACGT 1 cut(s) 408
HpyF10VI GCNNNNNNNGC 2 cut(s) 204, 668
HpyF3I CTNAG 2 cut(s) 109, 144
HpySE526I ACGT 1 cut(s) 408
Hsp92II CATG 9 cut(s) 61, 93, 99, 164, 212, 657, 675, 710, 764
HspAI GCGC 1 cut(s) 69
Kzo9I GATC 3 cut(s) 420, 757, 764
Lsp1109I GCAGC 4 cut(s) 207, 259, 591, 790
LweI GCATC 2 cut(s) 652, 796
MaeI CTAG 5 cut(s) 134, 204, 861, 969, 1027
MaeII ACGT 1 cut(s) 408
MaeIII GTNAC 3 cut(s) 434, 561, 616
MalI GATC 3 cut(s) 422, 759, 766
MboI GATC 3 cut(s) 420, 757, 764
MboII GAAGA 3 cut(s) 58, 620, 922
MfeI CAATTG 1 cut(s) 327
MflI RGATCY 1 cut(s) 764
MhlI GDGCHC 1 cut(s) 956
MlsI TGGCCA 1 cut(s) 221
MluCI AATT 5 cut(s) 167, 327, 403, 555, 934
MluNI TGGCCA 1 cut(s) 221
MmeI TCCRAC 1 cut(s) 452
MnlI CCTC 6 cut(s) 183, 312, 636, 778, 911, 969
Mox20I TGGCCA 1 cut(s) 221
MscI TGGCCA 1 cut(s) 221
MseI TTAA 3 cut(s) 453, 540, 722
MslI CAYNNNNRTG 2 cut(s) 94, 267
Msp20I TGGCCA 1 cut(s) 221
MspA1I CMGCKG 1 cut(s) 198
MspI CCGG 2 cut(s) 398, 439
MunI CAATTG 1 cut(s) 327
Mva1269I GAATGC 1 cut(s) 33
MvnI CGCG 1 cut(s) 536
MwoI GCNNNNNNNGC 2 cut(s) 204, 668
NcoI CCATGG 1 cut(s) 208
NdeI CATATG 1 cut(s) 902
NdeII GATC 3 cut(s) 420, 757, 764
NlaIII CATG 9 cut(s) 61, 93, 99, 164, 212, 657, 675, 710, 764
NlaIV GGNNCC 4 cut(s) 101, 396, 766, 866
NmuCI GTSAC 1 cut(s) 561
NspI RCATGY 3 cut(s) 164, 675, 710
NspV TTCGAA 1 cut(s) 712
OliI CACNNNNGTG 1 cut(s) 267
PciI ACATGT 1 cut(s) 160
PctI GAATGC 1 cut(s) 33
PfeI GAWTC 1 cut(s) 683
PinAI ACCGGT 1 cut(s) 438
PkrI GCNGC 6 cut(s) 197, 200, 274, 581, 600, 780
Ppu21I YACGTR 1 cut(s) 409
PscI ACATGT 1 cut(s) 160
PsiI TTATAA 1 cut(s) 252
PspFI CCCAGC 1 cut(s) 65
PspN4I GGNNCC 4 cut(s) 101, 396, 766, 866
PspPI GGNCC 1 cut(s) 99
PsuI RGATCY 1 cut(s) 764
RsaI GTAC 3 cut(s) 83, 347, 980
RsaNI GTAC 3 cut(s) 82, 346, 979
RseI CAYNNNNRTG 2 cut(s) 94, 267
SaqAI TTAA 3 cut(s) 453, 540, 722
SatI GCNGC 6 cut(s) 196, 199, 273, 580, 599, 779
Sau3AI GATC 3 cut(s) 420, 757, 764
Sau96I GGNCC 1 cut(s) 99
SduI GDGCHC 1 cut(s) 956
SfaNI GCATC 2 cut(s) 652, 796
SfuI TTCGAA 1 cut(s) 712
SinI GGWCC 1 cut(s) 99
SmiMI CAYNNNNRTG 2 cut(s) 94, 267
SmlI CTYRAG 1 cut(s) 782
SmoI CTYRAG 1 cut(s) 782
Sse9I AATT 5 cut(s) 167, 327, 403, 555, 934
SsiI CCGC 3 cut(s) 198, 536, 599
SspMI CTAG 5 cut(s) 134, 204, 861, 969, 1027
StyI CCWWGG 2 cut(s) 208, 860
TaaI ACNGT 3 cut(s) 493, 749, 1011
TaiI ACGT 1 cut(s) 411
TaqI TCGA 1 cut(s) 712
TasI AATT 5 cut(s) 167, 327, 403, 555, 934
TauI GCSGC 2 cut(s) 201, 601
TfiI GAWTC 1 cut(s) 683
Tru1I TTAA 3 cut(s) 453, 540, 722
Tru9I TTAA 3 cut(s) 453, 540, 722
TscAI CASTG 3 cut(s) 180, 570, 697
TseFI GTSAC 1 cut(s) 561
TseI GCWGC 4 cut(s) 195, 272, 579, 778
Tsp45I GTSAC 1 cut(s) 561
TspDTI ATGAA 4 cut(s) 246, 439, 627, 840
TspGWI ACGGA 1 cut(s) 770
TspRI CASTG 3 cut(s) 180, 570, 697
VpaK11BI GGWCC 1 cut(s) 99
XceI RCATGY 3 cut(s) 164, 675, 710
XcmI CCANNNNNNNNNTGG 1 cut(s) 993
XmaJI CCTAGG 1 cut(s) 860
XmiI GTMKAC 1 cut(s) 155
XspI CTAG 5 cut(s) 134, 204, 861, 969, 1027
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.