f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Beta-prop_KIB1-4 | PF03478 | 2 - 197 | 3.4e-21 | KIB1-4 beta-propeller |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 248 |
| AccB1I | GGYRCC | 1 cut(s) | 52 |
| AccII | CGCG | 1 cut(s) | 391 |
| AciI | CCGC | 4 cut(s) | 152, 235, 391, 395 |
| AclI | AACGTT | 1 cut(s) | 39 |
| AclWI | GGATC | 1 cut(s) | 377 |
| AcoI | YGGCCR | 3 cut(s) | 96, 153, 392 |
| AcsI | RAATTY | 2 cut(s) | 112, 324 |
| AcuI | CTGAAG | 1 cut(s) | 39 |
| AfaI | GTAC | 1 cut(s) | 239 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 609 |
| AgeI | ACCGGT | 1 cut(s) | 49 |
| AgsI | TTSAA | 6 cut(s) | 44, 133, 229, 479, 520, 586 |
| AjnI | CCWGG | 1 cut(s) | 216 |
| AluBI | AGCT | 1 cut(s) | 547 |
| AluI | AGCT | 1 cut(s) | 547 |
| Alw26I | GTCTC | 2 cut(s) | 183, 486 |
| AlwI | GGATC | 1 cut(s) | 377 |
| AoxI | GGCC | 3 cut(s) | 96, 153, 392 |
| ApeKI | GCWGC | 2 cut(s) | 149, 499 |
| ApoI | RAATTY | 2 cut(s) | 112, 324 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 182, 214, 517, 549 |
| AsiGI | ACCGGT | 1 cut(s) | 49 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 137 |
| AspS9I | GGNCC | 1 cut(s) | 600 |
| AsuII | TTCGAA | 1 cut(s) | 508 |
| AvaII | GGWCC | 1 cut(s) | 600 |
| BalI | TGGCCA | 1 cut(s) | 98 |
| BanI | GGYRCC | 1 cut(s) | 52 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 221, 253, 370, 402 |
| BbvI | GCAGC | 2 cut(s) | 161, 486 |
| BccI | CCATC | 1 cut(s) | 590 |
| BciT130I | CCWGG | 1 cut(s) | 218 |
| BclI | TGATCA | 1 cut(s) | 538 |
| BcoDI | GTCTC | 2 cut(s) | 183, 486 |
| BfaI | CTAG | 1 cut(s) | 341 |
| BisI | GCNGC | 5 cut(s) | 150, 153, 392, 395, 500 |
| BlsI | GCNGC | 5 cut(s) | 151, 154, 393, 396, 501 |
| Bme1390I | CCNGG | 1 cut(s) | 218 |
| Bme18I | GGWCC | 1 cut(s) | 600 |
| BmgT120I | GGNCC | 1 cut(s) | 600 |
| BmiI | GGNNCC | 3 cut(s) | 54, 79, 601 |
| BmrFI | CCNGG | 1 cut(s) | 218 |
| BmsI | GCATC | 3 cut(s) | 292, 610, 640 |
| BoxI | GACNNNNGTC | 1 cut(s) | 275 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 101, 133 |
| BpmI | CTGGAG | 1 cut(s) | 64 |
| Bpu14I | TTCGAA | 1 cut(s) | 508 |
| BsaJI | CCNNGG | 1 cut(s) | 85 |
| BsaWI | WCCGGW | 1 cut(s) | 49 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 58, 88, 618, 648 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 609 |
| Bse118I | RCCGGY | 1 cut(s) | 49 |
| BseBI | CCWGG | 1 cut(s) | 218 |
| BseDI | CCNNGG | 1 cut(s) | 85 |
| BseGI | GGATG | 2 cut(s) | 226, 622 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 609 |
| BseX3I | CGGCCG | 1 cut(s) | 392 |
| BseXI | GCAGC | 2 cut(s) | 161, 486 |
| BseYI | CCCAGC | 1 cut(s) | 547 |
| BsgI | GTGCAG | 1 cut(s) | 91 |
| Bsh1236I | CGCG | 1 cut(s) | 391 |
| Bsh1285I | CGRYCG | 1 cut(s) | 395 |
| BshFI | GGCC | 3 cut(s) | 98, 155, 394 |
| BshNI | GGYRCC | 1 cut(s) | 52 |
| BshTI | ACCGGT | 1 cut(s) | 49 |
| BsiEI | CGRYCG | 1 cut(s) | 395 |
| BsiSI | CCGG | 1 cut(s) | 50 |
| BslFI | GGGAC | 1 cut(s) | 613 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 609 |
| BsmAI | GTCTC | 2 cut(s) | 183, 486 |
| BsmFI | GGGAC | 1 cut(s) | 613 |
| BsnI | GGCC | 3 cut(s) | 98, 155, 394 |
| Bsp119I | TTCGAA | 1 cut(s) | 508 |
| Bsp143I | GATC | 2 cut(s) | 382, 538 |
| Bsp19I | CCATGG | 1 cut(s) | 85 |
| BspACI | CCGC | 4 cut(s) | 152, 235, 391, 395 |
| BspANI | GGCC | 3 cut(s) | 98, 155, 394 |
| BspFNI | CGCG | 1 cut(s) | 391 |
| BspLI | GGNNCC | 3 cut(s) | 54, 79, 601 |
| BspPI | GGATC | 1 cut(s) | 377 |
| BspT104I | TTCGAA | 1 cut(s) | 508 |
| BspT107I | GGYRCC | 1 cut(s) | 52 |
| BsrFI | RCCGGY | 1 cut(s) | 49 |
| BssAI | RCCGGY | 1 cut(s) | 49 |
| BssECI | CCNNGG | 1 cut(s) | 85 |
| BssMI | GATC | 2 cut(s) | 382, 538 |
| BssT1I | CCWWGG | 1 cut(s) | 85 |
| Bst2UI | CCWGG | 1 cut(s) | 218 |
| BstBI | TTCGAA | 1 cut(s) | 508 |
| BstDSI | CCRYGG | 1 cut(s) | 85 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 607 |
| BstF5I | GGATG | 2 cut(s) | 226, 622 |
| BstFNI | CGCG | 1 cut(s) | 391 |
| BstKTI | GATC | 2 cut(s) | 385, 541 |
| BstMAI | GTCTC | 2 cut(s) | 183, 486 |
| BstMBI | GATC | 2 cut(s) | 382, 538 |
| BstMCI | CGRYCG | 1 cut(s) | 395 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 464, 635 |
| BstNI | CCWGG | 1 cut(s) | 218 |
| BstNSI | RCATGY | 1 cut(s) | 506 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 275 |
| BstSCI | CCNGG | 1 cut(s) | 216 |
| BstUI | CGCG | 1 cut(s) | 391 |
| BstV1I | GCAGC | 2 cut(s) | 161, 486 |
| BstZI | CGGCCG | 1 cut(s) | 392 |
| BsuRI | GGCC | 3 cut(s) | 98, 155, 394 |
| BtgI | CCRYGG | 1 cut(s) | 85 |
| BtsCI | GGATG | 2 cut(s) | 226, 622 |
| BtsI | GCAGTG | 1 cut(s) | 79 |
| BtsIMutI | CAGTG | 1 cut(s) | 79 |
| CciNI | GCGGCCGC | 1 cut(s) | 392 |
| Cfr10I | RCCGGY | 1 cut(s) | 49 |
| Cfr13I | GGNCC | 1 cut(s) | 600 |
| CseI | GACGC | 1 cut(s) | 345 |
| Csp6I | GTAC | 1 cut(s) | 238 |
| CspAI | ACCGGT | 1 cut(s) | 49 |
| CviAII | CATG | 3 cut(s) | 86, 107, 503 |
| CviJI | RGCY | 7 cut(s) | 12, 78, 84, 98, 155, 394, 547 |
| CviKI_1 | RGCY | 7 cut(s) | 12, 78, 84, 98, 155, 394, 547 |
| CviQI | GTAC | 1 cut(s) | 238 |
| DpnI | GATC | 2 cut(s) | 384, 540 |
| DpnII | GATC | 2 cut(s) | 382, 538 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 248 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 248 |
| EaeI | YGGCCR | 3 cut(s) | 96, 153, 392 |
| EagI | CGGCCG | 1 cut(s) | 392 |
| EclXI | CGGCCG | 1 cut(s) | 392 |
| Eco130I | CCWWGG | 1 cut(s) | 85 |
| Eco47I | GGWCC | 1 cut(s) | 600 |
| Eco52I | CGGCCG | 1 cut(s) | 392 |
| Eco57I | CTGAAG | 1 cut(s) | 39 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 607 |
| EcoO109I | RGGNCCY | 1 cut(s) | 600 |
| EcoRII | CCWGG | 1 cut(s) | 216 |
| EcoT14I | CCWWGG | 1 cut(s) | 85 |
| EcoT22I | ATGCAT | 1 cut(s) | 655 |
| ErhI | CCWWGG | 1 cut(s) | 85 |
| FaeI | CATG | 3 cut(s) | 89, 110, 506 |
| FaqI | GGGAC | 1 cut(s) | 613 |
| FatI | CATG | 3 cut(s) | 85, 106, 502 |
| FauNDI | CATATG | 1 cut(s) | 631 |
| FbaI | TGATCA | 1 cut(s) | 538 |
| Fnu4HI | GCNGC | 5 cut(s) | 150, 153, 392, 395, 500 |
| FokI | GGATG | 2 cut(s) | 233, 629 |
| Fsp4HI | GCNGC | 5 cut(s) | 150, 153, 392, 395, 500 |
| FspBI | CTAG | 1 cut(s) | 341 |
| GluI | GCNGC | 5 cut(s) | 150, 153, 392, 395, 500 |
| GsaI | CCCAGC | 1 cut(s) | 551 |
| GsuI | CTGGAG | 1 cut(s) | 64 |
| HaeIII | GGCC | 3 cut(s) | 98, 155, 394 |
| HapII | CCGG | 1 cut(s) | 50 |
| HgaI | GACGC | 1 cut(s) | 345 |
| Hin1II | CATG | 3 cut(s) | 89, 110, 506 |
| HinfI | GANTC | 2 cut(s) | 133, 479 |
| HpaII | CCGG | 1 cut(s) | 50 |
| Hpy188I | TCNGA | 4 cut(s) | 19, 143, 188, 301 |
| Hpy188III | TCNNGA | 2 cut(s) | 280, 536 |
| Hpy99I | CGWCG | 1 cut(s) | 281 |
| HpyAV | CCTTC | 4 cut(s) | 14, 396, 504, 524 |
| HpyCH4IV | ACGT | 1 cut(s) | 39 |
| HpyCH4V | TGCA | 6 cut(s) | 72, 208, 332, 502, 623, 653 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 464, 635 |
| HpySE526I | ACGT | 1 cut(s) | 39 |
| Hsp92II | CATG | 3 cut(s) | 89, 110, 506 |
| Ksp22I | TGATCA | 1 cut(s) | 538 |
| Kzo9I | GATC | 2 cut(s) | 382, 538 |
| LmnI | GCTCC | 2 cut(s) | 83, 626 |
| LpnPI | CCDG | 7 cut(s) | 63, 94, 203, 230, 533, 599, 609 |
| Lsp1109I | GCAGC | 2 cut(s) | 161, 486 |
| LweI | GCATC | 3 cut(s) | 292, 610, 640 |
| MaeI | CTAG | 1 cut(s) | 341 |
| MaeII | ACGT | 1 cut(s) | 39 |
| MalI | GATC | 2 cut(s) | 384, 540 |
| MboI | GATC | 2 cut(s) | 382, 538 |
| MboII | GAAGA | 1 cut(s) | 241 |
| MlsI | TGGCCA | 1 cut(s) | 98 |
| MluCI | AATT | 7 cut(s) | 44, 112, 197, 324, 351, 405, 559 |
| MluNI | TGGCCA | 1 cut(s) | 98 |
| MmeI | TCCRAC | 1 cut(s) | 316 |
| MnlI | CCTC | 4 cut(s) | 60, 177, 450, 603 |
| Mox20I | TGGCCA | 1 cut(s) | 98 |
| Mph1103I | ATGCAT | 1 cut(s) | 655 |
| MroXI | GAANNNNTTC | 1 cut(s) | 137 |
| MscI | TGGCCA | 1 cut(s) | 98 |
| MseI | TTAA | 1 cut(s) | 664 |
| MslI | CAYNNNNRTG | 1 cut(s) | 318 |
| Msp20I | TGGCCA | 1 cut(s) | 98 |
| MspA1I | CMGCKG | 1 cut(s) | 152 |
| MspI | CCGG | 1 cut(s) | 50 |
| MspR9I | CCNGG | 1 cut(s) | 218 |
| MvaI | CCWGG | 1 cut(s) | 218 |
| MvnI | CGCG | 1 cut(s) | 391 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 464, 635 |
| NcoI | CCATGG | 1 cut(s) | 85 |
| NdeI | CATATG | 1 cut(s) | 631 |
| NdeII | GATC | 2 cut(s) | 382, 538 |
| NlaIII | CATG | 3 cut(s) | 89, 110, 506 |
| NlaIV | GGNNCC | 3 cut(s) | 54, 79, 601 |
| NotI | GCGGCCGC | 1 cut(s) | 392 |
| NsiI | ATGCAT | 1 cut(s) | 655 |
| NspI | RCATGY | 1 cut(s) | 506 |
| NspV | TTCGAA | 1 cut(s) | 508 |
| PdmI | GAANNNNTTC | 1 cut(s) | 137 |
| PfeI | GAWTC | 2 cut(s) | 133, 479 |
| PfoI | TCCNGGA | 1 cut(s) | 216 |
| PinAI | ACCGGT | 1 cut(s) | 49 |
| PkrI | GCNGC | 5 cut(s) | 151, 154, 393, 396, 501 |
| PpuMI | RGGWCCY | 1 cut(s) | 600 |
| PshAI | GACNNNNGTC | 1 cut(s) | 275 |
| Psp1406I | AACGTT | 1 cut(s) | 39 |
| Psp5II | RGGWCCY | 1 cut(s) | 600 |
| Psp6I | CCWGG | 1 cut(s) | 216 |
| PspFI | CCCAGC | 1 cut(s) | 547 |
| PspGI | CCWGG | 1 cut(s) | 216 |
| PspN4I | GGNNCC | 3 cut(s) | 54, 79, 601 |
| PspPI | GGNCC | 1 cut(s) | 600 |
| PspPPI | RGGWCCY | 1 cut(s) | 600 |
| RsaI | GTAC | 1 cut(s) | 239 |
| RsaNI | GTAC | 1 cut(s) | 238 |
| RseI | CAYNNNNRTG | 1 cut(s) | 318 |
| SaqAI | TTAA | 1 cut(s) | 664 |
| SatI | GCNGC | 5 cut(s) | 150, 153, 392, 395, 500 |
| Sau3AI | GATC | 2 cut(s) | 382, 538 |
| Sau96I | GGNCC | 1 cut(s) | 600 |
| ScrFI | CCNGG | 1 cut(s) | 218 |
| SetI | ASST | 7 cut(s) | 32, 42, 71, 535, 549, 579, 605 |
| SfaNI | GCATC | 3 cut(s) | 292, 610, 640 |
| SfuI | TTCGAA | 1 cut(s) | 508 |
| SinI | GGWCC | 1 cut(s) | 600 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 318 |
| Sse9I | AATT | 7 cut(s) | 44, 112, 197, 324, 351, 405, 559 |
| SsiI | CCGC | 4 cut(s) | 152, 235, 391, 395 |
| SspMI | CTAG | 1 cut(s) | 341 |
| StyD4I | CCNGG | 1 cut(s) | 216 |
| StyI | CCWWGG | 1 cut(s) | 85 |
| TaiI | ACGT | 1 cut(s) | 42 |
| TaqI | TCGA | 2 cut(s) | 279, 508 |
| TasI | AATT | 7 cut(s) | 44, 112, 197, 324, 351, 405, 559 |
| TauI | GCSGC | 3 cut(s) | 155, 394, 397 |
| TfiI | GAWTC | 2 cut(s) | 133, 479 |
| Tru1I | TTAA | 1 cut(s) | 664 |
| Tru9I | TTAA | 1 cut(s) | 664 |
| TscAI | CASTG | 1 cut(s) | 79 |
| TseI | GCWGC | 2 cut(s) | 149, 499 |
| TspDTI | ATGAA | 2 cut(s) | 149, 336 |
| TspRI | CASTG | 1 cut(s) | 79 |
| VpaK11BI | GGWCC | 1 cut(s) | 600 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 607 |
| XapI | RAATTY | 2 cut(s) | 112, 324 |
| XceI | RCATGY | 1 cut(s) | 506 |
| XmnI | GAANNNNTTC | 1 cut(s) | 137 |
| XspI | CTAG | 1 cut(s) | 341 |
| Zsp2I | ATGCAT | 1 cut(s) | 655 |