Rmu_sc0002687.1_g000005

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002687.1
OG0000064
Physical Location & Seq
Reverse (-)
28585 .. 33561
4977 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002687.1_g000005.1.cds

Sequence Viewer

Length: 1383 bp
atggcagctgcacctaagggcaactccaaccttggggtgccaaaccaaattttgggcaattttgagactttggatctccaaccttgtgttttaggggggaccagatctgatcactgtacatgggggccagcccacttgttgtctcagcccaaatgccgaaccaacgcgcctgaagggataattgaaggagacgcgcgcgccaacggctgggaagagagagcacgcgcgcatcatccgctggagagagaagatcggatgctttttcgtctgcagacatgggccccgcgccaattgctgtcccctgagaaattggtatcagccgtggactatttgcgattcagtgttgtttgtatttcatggtatcatgtagcaaaagataactacaagagtgcccgtattaggatgtctggtccaatgttgctcttgatttctagtgacgaagaagatagatggaatttattcaatgtcatggaagataaggttcttgatatgcaagtaagattaccgaataagcgattttgtgggtcttcaaaaggatggctcgtagcagtagaagaaaattatgaagtgaccttactgaatccattctatagggttaaagggagggaagatcaagaaaattcaatcattcgccttcctccaatgatccctccagattggttcaaagttaaaagaagctgtgactattttatccacaaggcaacaatttcagcagacccaatattagatgcaaacaagtgcattgttgtggttatatatgaggatcgttgtcaattggcttttattagactgaaagacacaaaatggacttaccttgataaaaggtggtacccagttgcagaagttgttcatgttgaagacaatttttatgctgttgataattcggaccaacttttatcttttgagattactagggagtcaaactcagatgtcacattggctataaagggcctttcgcaagattacgtcaataggaattatctggttcatacagatgatggggcgttgtggatggttgaaaggattctgggctggcaagttgacagatgtgtgactacagaatttaagatttttgaactgaactctgaaaagttcgaatggactgagagaacaaccttaggtgacactgctctctttgtgggagataactcttcggtatctgtgttggcgtcaaaatttccagaatgtcaaccaaactgcatttacttcaaccaagataataatcgtatggacagtgaaattagaccttgtggacctcatgatttcggtgtgtataatgtcaaaagtaaagaaatttcaaagccttatacaacagatgcaatgaatcgcttggccaggactaagctacatccaatctggcttgtgccaactttttttctctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

460

Amino Acids

53.08

Weight (kDa)

5.88

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 828
AccB1I GGYRCC 2 cut(s) 37, 828
AccB7I CCANNNNNTGG 2 cut(s) 52, 207
AccII CGCG 7 cut(s) 167, 194, 196, 198, 225, 227, 286
AciI CCGC 2 cut(s) 236, 284
AclWI GGATC 3 cut(s) 81, 640, 771
AcoI YGGCCR 1 cut(s) 1332
AcsI RAATTY 6 cut(s) 48, 454, 619, 1061, 1175, 1293
AcuI CTGAAG 1 cut(s) 192
AcyI GRCGYC 1 cut(s) 1169
AfaI GTAC 2 cut(s) 118, 830
AfiI CCNNNNNNNGG 4 cut(s) 33, 52, 207, 399
AjnI CCWGG 1 cut(s) 1334
AluBI AGCT 3 cut(s) 8, 678, 1345
AluI AGCT 3 cut(s) 8, 678, 1345
Alw21I GWGCWC 1 cut(s) 223
Alw26I GTCTC 3 cut(s) 59, 147, 183
AlwI GGATC 3 cut(s) 81, 640, 771
AoxI GGCC 4 cut(s) 125, 279, 949, 1332
ApaI GGGCCC 1 cut(s) 283
ApeKI GCWGC 2 cut(s) 5, 8
ApoI RAATTY 6 cut(s) 48, 454, 619, 1061, 1175, 1293
Asp700I GAANNNNTTC 4 cut(s) 458, 584, 846, 1023
Asp718I GGTACC 1 cut(s) 828
AspLEI GCGC 7 cut(s) 169, 196, 198, 200, 227, 229, 288
AspS9I GGNCC 8 cut(s) 99, 125, 279, 280, 410, 886, 949, 1253
AsuHPI GGTGA 1 cut(s) 1133
AsuII TTCGAA 1 cut(s) 1095
AvaII GGWCC 4 cut(s) 99, 410, 886, 1253
AxyI CCTNAGG 2 cut(s) 15, 1117
BaeGI GKGCMC 2 cut(s) 283, 394
BalI TGGCCA 1 cut(s) 1334
BanI GGYRCC 2 cut(s) 37, 828
BanII GRGCYC 1 cut(s) 283
BarI GAAGNNNNNNTAC 2 cut(s) 558, 590
BbsI GAAGAC 2 cut(s) 519, 864
Bbv12I GWGCWC 1 cut(s) 223
BbvI GCAGC 1 cut(s) 17
BccI CCATC 4 cut(s) 444, 531, 992, 1006
BceAI ACGGC 2 cut(s) 220, 305
BciT130I CCWGG 1 cut(s) 1336
BclI TGATCA 1 cut(s) 109
BcoDI GTCTC 3 cut(s) 59, 147, 183
BfaI CTAG 2 cut(s) 432, 912
BfmI CTRYAG 3 cut(s) 269, 589, 1056
BglII AGATCT 1 cut(s) 104
BisI GCNGC 2 cut(s) 6, 9
BlsI GCNGC 2 cut(s) 7, 10
Bme1390I CCNGG 1 cut(s) 1336
Bme18I GGWCC 4 cut(s) 99, 410, 886, 1253
BmgT120I GGNCC 8 cut(s) 99, 125, 279, 280, 410, 886, 949, 1253
BmiI GGNNCC 6 cut(s) 39, 100, 126, 281, 282, 830
BmrFI CCNGG 1 cut(s) 1336
BmrI ACTGGG 1 cut(s) 827
BmsI GCATC 4 cut(s) 238, 246, 718, 1306
BmuI ACTGGG 1 cut(s) 827
BpiI GAAGAC 2 cut(s) 519, 864
BplI GAGNNNNNCTC 2 cut(s) 908, 940
BpmI CTGGAG 2 cut(s) 260, 636
Bpu14I TTCGAA 1 cut(s) 1095
BsaBI GATNNNNATC 1 cut(s) 1221
BsaHI GRCGYC 1 cut(s) 1169
BsaJI CCNNGG 2 cut(s) 31, 321
Bsc4I CCNNNNNNNGG 4 cut(s) 33, 52, 207, 399
Bse1I ACTGG 1 cut(s) 833
Bse21I CCTNAGG 2 cut(s) 15, 1117
Bse3DI GCAATG 1 cut(s) 1326
Bse8I GATNNNNATC 1 cut(s) 1221
BseBI CCWGG 1 cut(s) 1336
BseDI CCNNGG 2 cut(s) 31, 321
BseGI GGATG 6 cut(s) 232, 261, 408, 542, 1017, 1348
BseJI GATNNNNATC 1 cut(s) 1221
BseLI CCNNNNNNNGG 4 cut(s) 33, 52, 207, 399
BseMI GCAATG 1 cut(s) 1326
BseMII CTCAG 4 cut(s) 158, 294, 939, 1095
BseNI ACTGG 1 cut(s) 833
BsePI GCGCGC 3 cut(s) 194, 196, 225
BseSI GKGCMC 2 cut(s) 283, 394
BseXI GCAGC 1 cut(s) 17
BseYI CCCAGC 1 cut(s) 207
Bsh1236I CGCG 7 cut(s) 167, 194, 196, 198, 225, 227, 286
BshFI GGCC 4 cut(s) 127, 281, 951, 1334
BshNI GGYRCC 2 cut(s) 37, 828
BsiHKAI GWGCWC 1 cut(s) 223
BslFI GGGAC 2 cut(s) 112, 283
BslI CCNNNNNNNGG 4 cut(s) 33, 52, 207, 399
BsmAI GTCTC 3 cut(s) 59, 147, 183
BsmBI CGTCTC 1 cut(s) 183
BsmFI GGGAC 2 cut(s) 112, 283
BsnI GGCC 4 cut(s) 127, 281, 951, 1334
Bsp119I TTCGAA 1 cut(s) 1095
Bsp120I GGGCCC 1 cut(s) 279
Bsp1286I GDGCHC 3 cut(s) 223, 283, 394
Bsp1407I TGTACA 1 cut(s) 116
Bsp143I GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
BspACI CCGC 2 cut(s) 236, 284
BspANI GGCC 4 cut(s) 127, 281, 951, 1334
BspCNI CTCAG 4 cut(s) 157, 295, 938, 1096
BspFNI CGCG 7 cut(s) 167, 194, 196, 198, 225, 227, 286
BspHI TCATGA 1 cut(s) 1258
BspLI GGNNCC 6 cut(s) 39, 100, 126, 281, 282, 830
BspMAI CTGCAG 1 cut(s) 273
BspPI GGATC 3 cut(s) 81, 640, 771
BspT104I TTCGAA 1 cut(s) 1095
BspT107I GGYRCC 2 cut(s) 37, 828
BsrDI GCAATG 1 cut(s) 1326
BsrGI TGTACA 1 cut(s) 116
BsrI ACTGG 1 cut(s) 833
BssECI CCNNGG 2 cut(s) 31, 321
BssHII GCGCGC 3 cut(s) 194, 196, 225
BssMI GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
BssNI GRCGYC 1 cut(s) 1169
BssT1I CCWWGG 1 cut(s) 31
Bst2UI CCWGG 1 cut(s) 1336
Bst4CI ACNGT 2 cut(s) 116, 1235
Bst6I CTCTTC 2 cut(s) 207, 1156
BstACI GRCGYC 1 cut(s) 1169
BstAUI TGTACA 1 cut(s) 116
BstBI TTCGAA 1 cut(s) 1095
BstC8I GCNNGC 6 cut(s) 129, 196, 198, 223, 227, 1034
BstDEI CTNAG 7 cut(s) 15, 144, 303, 925, 1104, 1117, 1341
BstDSI CCRYGG 1 cut(s) 321
BstF5I GGATG 6 cut(s) 232, 261, 408, 542, 1017, 1348
BstFNI CGCG 7 cut(s) 167, 194, 196, 198, 225, 227, 286
BstHHI GCGC 7 cut(s) 169, 196, 198, 200, 227, 229, 288
BstKTI GATC 7 cut(s) 76, 107, 112, 253, 613, 648, 766
BstMAI GTCTC 3 cut(s) 59, 147, 183
BstMBI GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
BstMWI GCNNNNNNNGC 3 cut(s) 204, 235, 292
BstNI CCWGG 1 cut(s) 1336
BstSCI CCNGG 1 cut(s) 1334
BstSFI CTRYAG 3 cut(s) 269, 589, 1056
BstSLI GKGCMC 2 cut(s) 283, 394
BstUI CGCG 7 cut(s) 167, 194, 196, 198, 225, 227, 286
BstV1I GCAGC 1 cut(s) 17
BstV2I GAAGAC 2 cut(s) 519, 864
BstX2I RGATCY 2 cut(s) 73, 104
BstYI RGATCY 2 cut(s) 73, 104
Bsu36I CCTNAGG 2 cut(s) 15, 1117
BsuRI GGCC 4 cut(s) 127, 281, 951, 1334
BtgI CCRYGG 1 cut(s) 321
BtsCI GGATG 6 cut(s) 232, 261, 408, 542, 1017, 1348
BtsI GCAGTG 1 cut(s) 1125
BtsIMutI CAGTG 4 cut(s) 112, 346, 1125, 1240
Cac8I GCNNGC 6 cut(s) 129, 196, 198, 223, 227, 1034
CciI TCATGA 1 cut(s) 1258
CfoI GCGC 7 cut(s) 169, 196, 198, 200, 227, 229, 288
Cfr13I GGNCC 8 cut(s) 99, 125, 279, 280, 410, 886, 949, 1253
CseI GACGC 2 cut(s) 200, 1158
Csp6I GTAC 2 cut(s) 117, 829
CviAII CATG 7 cut(s) 120, 276, 357, 365, 469, 851, 1259
CviQI GTAC 2 cut(s) 117, 829
DdeI CTNAG 7 cut(s) 15, 144, 303, 925, 1104, 1117, 1341
DpnI GATC 7 cut(s) 75, 106, 111, 252, 612, 647, 765
DpnII GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
EaeI YGGCCR 1 cut(s) 1332
Eam1104I CTCTTC 2 cut(s) 207, 1156
EarI CTCTTC 2 cut(s) 207, 1156
Eco130I CCWWGG 1 cut(s) 31
Eco24I GRGCYC 1 cut(s) 283
Eco47I GGWCC 4 cut(s) 99, 410, 886, 1253
Eco57I CTGAAG 1 cut(s) 192
Eco81I CCTNAGG 2 cut(s) 15, 1117
EcoO109I RGGNCCY 2 cut(s) 280, 949
EcoRII CCWGG 1 cut(s) 1334
EcoT14I CCWWGG 1 cut(s) 31
EcoT38I GRGCYC 1 cut(s) 283
ErhI CCWWGG 1 cut(s) 31
Esp3I CGTCTC 1 cut(s) 183
FaeI CATG 7 cut(s) 123, 279, 360, 368, 472, 854, 1262
FaqI GGGAC 2 cut(s) 112, 283
FatI CATG 7 cut(s) 119, 275, 356, 364, 468, 850, 1258
FauI CCCGC 1 cut(s) 291
FbaI TGATCA 1 cut(s) 109
Fnu4HI GCNGC 2 cut(s) 6, 9
FokI GGATG 6 cut(s) 219, 268, 415, 549, 1024, 1335
FriOI GRGCYC 1 cut(s) 283
Fsp4HI GCNGC 2 cut(s) 6, 9
FspBI CTAG 2 cut(s) 432, 912
GlaI GCGC 7 cut(s) 168, 195, 197, 199, 226, 228, 287
GluI GCNGC 2 cut(s) 6, 9
GsaI CCCAGC 1 cut(s) 211
GsuI CTGGAG 2 cut(s) 260, 636
HaeIII GGCC 4 cut(s) 127, 281, 951, 1334
HgaI GACGC 2 cut(s) 200, 1158
HhaI GCGC 7 cut(s) 169, 196, 198, 200, 227, 229, 288
Hin1I GRCGYC 1 cut(s) 1169
Hin1II CATG 7 cut(s) 123, 279, 360, 368, 472, 854, 1262
Hin6I GCGC 7 cut(s) 167, 194, 196, 198, 225, 227, 286
HinP1I GCGC 7 cut(s) 167, 194, 196, 198, 225, 227, 286
HincII GTYRAC 2 cut(s) 1042, 1190
HindII GTYRAC 2 cut(s) 1042, 1190
HinfI GANTC 5 cut(s) 336, 580, 917, 1024, 1324
HphI GGTGA 1 cut(s) 1133
Hpy166II GTNNAC 4 cut(s) 325, 1042, 1190, 1253
Hpy188I TCNGA 5 cut(s) 109, 255, 886, 928, 1087
Hpy188III TCNNGA 6 cut(s) 424, 485, 614, 653, 1181, 1259
Hpy8I GTNNAC 4 cut(s) 325, 1042, 1190, 1253
HpyAV CCTTC 3 cut(s) 167, 179, 644
HpyCH4III ACNGT 2 cut(s) 116, 1235
HpyCH4IV ACGT 1 cut(s) 966
HpyCH4V TGCA 8 cut(s) 11, 271, 493, 731, 741, 839, 1200, 1319
HpyF10VI GCNNNNNNNGC 3 cut(s) 204, 235, 292
HpyF3I CTNAG 7 cut(s) 15, 144, 303, 925, 1104, 1117, 1341
HpySE526I ACGT 1 cut(s) 966
Hsp92I GRCGYC 1 cut(s) 1169
Hsp92II CATG 7 cut(s) 123, 279, 360, 368, 472, 854, 1262
HspAI GCGC 7 cut(s) 167, 194, 196, 198, 225, 227, 286
KpnI GGTACC 1 cut(s) 832
Ksp22I TGATCA 1 cut(s) 109
Kzo9I GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
Lsp1109I GCAGC 1 cut(s) 17
LweI GCATC 4 cut(s) 238, 246, 718, 1306
MaeI CTAG 2 cut(s) 432, 912
MaeII ACGT 1 cut(s) 966
MaeIII GTNAC 6 cut(s) 434, 568, 680, 931, 1051, 1121
MalI GATC 7 cut(s) 75, 106, 111, 252, 612, 647, 765
MauBI CGCGCGCG 1 cut(s) 194
MboI GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
MfeI CAATTG 2 cut(s) 290, 773
MflI RGATCY 2 cut(s) 73, 104
MhlI GDGCHC 3 cut(s) 223, 283, 394
MlsI TGGCCA 1 cut(s) 1334
MluNI TGGCCA 1 cut(s) 1334
MlyI GAGTC 1 cut(s) 926
MmeI TCCRAC 2 cut(s) 51, 103
MnlI CCTC 5 cut(s) 597, 648, 660, 754, 1266
Mox20I TGGCCA 1 cut(s) 1334
MroXI GAANNNNTTC 4 cut(s) 458, 584, 846, 1023
MscI TGGCCA 1 cut(s) 1334
MseI TTAA 3 cut(s) 597, 669, 1065
MslI CAYNNNNRTG 2 cut(s) 746, 993
Msp20I TGGCCA 1 cut(s) 1334
MspA1I CMGCKG 2 cut(s) 8, 238
MspR9I CCNGG 1 cut(s) 1336
MunI CAATTG 2 cut(s) 290, 773
MvaI CCWGG 1 cut(s) 1336
MvnI CGCG 7 cut(s) 167, 194, 196, 198, 225, 227, 286
MwoI GCNNNNNNNGC 3 cut(s) 204, 235, 292
NdeII GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
NlaIII CATG 7 cut(s) 123, 279, 360, 368, 472, 854, 1262
NlaIV GGNNCC 6 cut(s) 39, 100, 126, 281, 282, 830
NmuCI GTSAC 6 cut(s) 434, 568, 680, 931, 1051, 1121
NspV TTCGAA 1 cut(s) 1095
PagI TCATGA 1 cut(s) 1258
PauI GCGCGC 3 cut(s) 194, 196, 225
PdmI GAANNNNTTC 4 cut(s) 458, 584, 846, 1023
PfeI GAWTC 4 cut(s) 336, 580, 1024, 1324
PflMI CCANNNNNTGG 2 cut(s) 52, 207
PkrI GCNGC 2 cut(s) 7, 10
PleI GAGTC 1 cut(s) 925
PpsI GAGTC 1 cut(s) 925
Psp6I CCWGG 1 cut(s) 1334
PspFI CCCAGC 1 cut(s) 207
PspGI CCWGG 1 cut(s) 1334
PspN4I GGNNCC 6 cut(s) 39, 100, 126, 281, 282, 830
PspOMI GGGCCC 1 cut(s) 279
PspPI GGNCC 8 cut(s) 99, 125, 279, 280, 410, 886, 949, 1253
PstI CTGCAG 1 cut(s) 273
PsuI RGATCY 2 cut(s) 73, 104
PteI GCGCGC 3 cut(s) 194, 196, 225
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 2 cut(s) 118, 830
RsaNI GTAC 2 cut(s) 117, 829
RseI CAYNNNNRTG 2 cut(s) 746, 993
SaqAI TTAA 3 cut(s) 597, 669, 1065
SatI GCNGC 2 cut(s) 6, 9
Sau3AI GATC 7 cut(s) 73, 104, 109, 250, 610, 645, 763
Sau96I GGNCC 8 cut(s) 99, 125, 279, 280, 410, 886, 949, 1253
SchI GAGTC 1 cut(s) 926
ScrFI CCNGG 1 cut(s) 1336
SduI GDGCHC 3 cut(s) 223, 283, 394
SfaNI GCATC 4 cut(s) 238, 246, 718, 1306
SfcI CTRYAG 3 cut(s) 269, 589, 1056
SfuI TTCGAA 1 cut(s) 1095
SinI GGWCC 4 cut(s) 99, 410, 886, 1253
SmiMI CAYNNNNRTG 2 cut(s) 746, 993
SsiI CCGC 2 cut(s) 236, 284
SspI AATATT 1 cut(s) 723
SspMI CTAG 2 cut(s) 432, 912
StyD4I CCNGG 1 cut(s) 1334
StyI CCWWGG 1 cut(s) 31
TaaI ACNGT 2 cut(s) 116, 1235
TaiI ACGT 1 cut(s) 969
TaqI TCGA 1 cut(s) 1095
TatI WGTACW 1 cut(s) 116
TfiI GAWTC 4 cut(s) 336, 580, 1024, 1324
Tru1I TTAA 3 cut(s) 597, 669, 1065
Tru9I TTAA 3 cut(s) 597, 669, 1065
TscAI CASTG 4 cut(s) 119, 346, 1132, 1240
TseFI GTSAC 6 cut(s) 434, 568, 680, 931, 1051, 1121
TseI GCWGC 2 cut(s) 5, 8
Tsp45I GTSAC 6 cut(s) 434, 568, 680, 931, 1051, 1121
TspDTI ATGAA 5 cut(s) 345, 579, 839, 977, 1337
TspRI CASTG 4 cut(s) 119, 346, 1132, 1240
Van91I CCANNNNNTGG 2 cut(s) 52, 207
VpaK11BI GGWCC 4 cut(s) 99, 410, 886, 1253
XapI RAATTY 6 cut(s) 48, 454, 619, 1061, 1175, 1293
XmnI GAANNNNTTC 4 cut(s) 458, 584, 846, 1023
XspI CTAG 2 cut(s) 432, 912
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.