Rmu_ssc0000204.1_g000011

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_ssc0000204.1
OG0000064
Physical Location & Seq
Reverse (-)
35834 .. 37556
1723 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_ssc0000204.1_g000011.1.cds

Sequence Viewer

Length: 1371 bp
atgtcggtcgcggacgagtctcccgtgaaacatgatctggtggtatggtatcacaatccctataccggcgtcgaaatttactccatgcatgaggtccacccggataacaagaataagcgacgtttggagtttgagctccctccccataggtcaattaagaagctccaccgaattgcctgcaacgctagttgctcgtctgtatcagaatgggcaagtcttccgaaggacattctccttttgatgttgcataagttgttcgaacccattgaccatgttcgtctggctgctgtttgcagccattggcataaagtctccaaagagcataatcacacaactcagcgctggtgcaacctacttccaatgctcatgatccccccctcccgcccccctagcccaatgaagcaaatggtttatagcctttctgaaggagaaacctatacaaacgttcaattaccggtgccttatgatcggaggtgctgtggctccagccatggttggttggccacagcacacgagaatttcgccataactcttttgaatcctttcagaaaagcggcggccattcatttgcctcccttgacaaccccacataatctccgagactaccaatttgggttacagaagttccaggatcagttgaagaagcgctacgactattatgtctgcaaggttatattatctgctgacccgtctttgaatccgcataattatgtggttgtggcaacctacgaatattgttgcaggttggctttcattaaagcaggacaaagagattggacttatgtcgagaaaacatatatgttttctgatgctatttttcacagaaatgaaatttatgcagttggactagggggaataattgcgtcagttgatgtcaatagtagtaatgatccttcgcggccgccagaagcaattccacttacacgtttacgaccaatggaacaccctctgttcccatacaaagcagataaggcatatcttgttgaatcaaccaatggagacttgctgcatgttcgaaggtttttgaaacgaaaggaaggtcttgatcaaaagctgggggttatcaattttgtggtatacaaggtgttattcaacgacaacgatgggacctttgtgaggcaggatctgatagacagcattggggatgatgctttgttcttgggtgataatcattcaatatctgttttggcttcaaattttcctaggtgccaaccaaattccatctacttcacaaatgacattatgaagggtggtatgggtatcttcaatttagcagacaagaccgccacacaacactaccctctaaatcccagtgagaggtacgtccgacccgctatatggattgtgccaccgttcaatggtcttcgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

456

Amino Acids

52.32

Weight (kDa)

8.65

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 659
Acc36I ACCTGC 1 cut(s) 732
AccB1I GGYRCC 2 cut(s) 457, 1206
AccI GTMKAC 1 cut(s) 1077
AccII CGCG 2 cut(s) 11, 898
AciI CCGC 9 cut(s) 11, 382, 554, 557, 701, 898, 902, 1284, 1332
AclI AACGTT 1 cut(s) 444
AclWI GGATC 4 cut(s) 364, 639, 884, 1131
AcoI YGGCCR 3 cut(s) 501, 558, 899
AcsI RAATTY 5 cut(s) 75, 517, 831, 1195, 1216
AcuI CTGAAG 1 cut(s) 444
AcyI GRCGYC 1 cut(s) 69
AfaI GTAC 1 cut(s) 1322
AfeI AGCGCT 2 cut(s) 341, 647
AfiI CCNNNNNNNGG 5 cut(s) 65, 1116, 1317, 1338, 1358
AflIII ACRYGT 1 cut(s) 923
AgeI ACCGGT 1 cut(s) 454
AjnI CCWGG 1 cut(s) 627
AluBI AGCT 3 cut(s) 136, 163, 1054
AluI AGCT 3 cut(s) 136, 163, 1054
Alw21I GWGCWC 1 cut(s) 138
Alw26I GTCTC 4 cut(s) 24, 316, 594, 993
AlwI GGATC 4 cut(s) 364, 639, 884, 1131
AlwNI CAGNNNCTG 1 cut(s) 1126
Aor51HI AGCGCT 2 cut(s) 341, 647
AoxI GGCC 3 cut(s) 501, 558, 899
ApeKI GCWGC 3 cut(s) 284, 294, 1006
ApoI RAATTY 5 cut(s) 75, 517, 831, 1195, 1216
ArsI GACNNNNNNTTYG 4 cut(s) 593, 625, 1024, 1056
AsiGI ACCGGT 1 cut(s) 454
Asp700I GAANNNNTTC 2 cut(s) 542, 912
AspA2I CCTAGG 1 cut(s) 1202
AspLEI GCGC 2 cut(s) 342, 648
AspS9I GGNCC 2 cut(s) 94, 1107
AsuC2I CCSGG 1 cut(s) 101
AsuHPI GGTGA 1 cut(s) 1175
AsuII TTCGAA 2 cut(s) 258, 1015
AvaII GGWCC 2 cut(s) 94, 1107
AvrII CCTAGG 1 cut(s) 1202
BalI TGGCCA 1 cut(s) 503
BanI GGYRCC 2 cut(s) 457, 1206
BanII GRGCYC 1 cut(s) 138
BarI GAAGNNNNNNTAC 4 cut(s) 632, 664, 877, 909
BauI CACGAG 1 cut(s) 512
BbsI GAAGAC 2 cut(s) 209, 1355
Bbv12I GWGCWC 1 cut(s) 138
BbvI GCAGC 3 cut(s) 271, 306, 993
BccI CCATC 2 cut(s) 1097, 1229
BcgI CGANNNNNNTGC 2 cut(s) 159, 193
BciT130I CCWGG 1 cut(s) 629
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 1 cut(s) 101
BcoDI GTCTC 4 cut(s) 24, 316, 594, 993
BfaI CTAG 5 cut(s) 186, 390, 848, 1203, 1369
BfoI RGCGCY 2 cut(s) 343, 649
BfuAI ACCTGC 1 cut(s) 732
BisI GCNGC 7 cut(s) 285, 295, 555, 558, 899, 902, 1007
BlnI CCTAGG 1 cut(s) 1202
BlsI GCNGC 7 cut(s) 286, 296, 556, 559, 900, 903, 1008
Bme1390I CCNGG 2 cut(s) 101, 629
Bme18I GGWCC 2 cut(s) 94, 1107
BmgT120I GGNCC 2 cut(s) 94, 1107
BmiI GGNNCC 4 cut(s) 459, 484, 1108, 1208
BmrFI CCNGG 2 cut(s) 101, 629
BmrI ACTGGG 1 cut(s) 1305
BmsI GCATC 2 cut(s) 799, 1138
BmuI ACTGGG 1 cut(s) 1305
BoxI GACNNNNGTC 1 cut(s) 782
BpiI GAAGAC 2 cut(s) 209, 1355
BpmI CTGGAG 1 cut(s) 469
Bpu14I TTCGAA 2 cut(s) 258, 1015
BpuMI CCSGG 1 cut(s) 101
BsaHI GRCGYC 1 cut(s) 69
BsaJI CCNNGG 2 cut(s) 490, 1202
BsaWI WCCGGW 1 cut(s) 454
BsaXI ACNNNNNCTCC 4 cut(s) 463, 493, 579, 609
Bsc4I CCNNNNNNNGG 5 cut(s) 65, 1116, 1317, 1338, 1358
Bse118I RCCGGY 2 cut(s) 65, 454
Bse1I ACTGG 1 cut(s) 1311
BseBI CCWGG 1 cut(s) 629
BseDI CCNNGG 2 cut(s) 490, 1202
BseGI GGATG 1 cut(s) 1150
BseLI CCNNNNNNNGG 5 cut(s) 65, 1116, 1317, 1338, 1358
BseMII CTCAG 1 cut(s) 350
BseNI ACTGG 1 cut(s) 1311
BseX3I CGGCCG 1 cut(s) 899
BseXI GCAGC 3 cut(s) 271, 306, 993
BseYI CCCAGC 1 cut(s) 1054
Bsh1236I CGCG 2 cut(s) 11, 898
Bsh1285I CGRYCG 2 cut(s) 9, 902
BshFI GGCC 3 cut(s) 503, 560, 901
BshNI GGYRCC 2 cut(s) 457, 1206
BshTI ACCGGT 1 cut(s) 454
BsiEI CGRYCG 2 cut(s) 9, 902
BsiHKAI GWGCWC 1 cut(s) 138
BsiSI CCGG 3 cut(s) 66, 101, 455
BslFI GGGAC 1 cut(s) 1120
BslI CCNNNNNNNGG 5 cut(s) 65, 1116, 1317, 1338, 1358
BsmAI GTCTC 4 cut(s) 24, 316, 594, 993
BsmFI GGGAC 1 cut(s) 1120
BsnI GGCC 3 cut(s) 503, 560, 901
Bsp119I TTCGAA 2 cut(s) 258, 1015
Bsp1286I GDGCHC 1 cut(s) 138
Bsp143I GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
Bsp19I CCATGG 1 cut(s) 490
BspACI CCGC 9 cut(s) 11, 382, 554, 557, 701, 898, 902, 1284, 1332
BspANI GGCC 3 cut(s) 503, 560, 901
BspCNI CTCAG 1 cut(s) 349
BspFNI CGCG 2 cut(s) 11, 898
BspHI TCATGA 1 cut(s) 366
BspLI GGNNCC 4 cut(s) 459, 484, 1108, 1208
BspMI ACCTGC 1 cut(s) 732
BspPI GGATC 4 cut(s) 364, 639, 884, 1131
BspT104I TTCGAA 2 cut(s) 258, 1015
BspT107I GGYRCC 2 cut(s) 457, 1206
BsrFI RCCGGY 2 cut(s) 65, 454
BsrI ACTGG 1 cut(s) 1311
BssAI RCCGGY 2 cut(s) 65, 454
BssECI CCNNGG 2 cut(s) 490, 1202
BssMI GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
BssNAI GTATAC 1 cut(s) 1078
BssNI GRCGYC 1 cut(s) 69
BssSI CACGAG 1 cut(s) 512
BssT1I CCWWGG 2 cut(s) 490, 1202
Bst1107I GTATAC 1 cut(s) 1078
Bst2BI CACGAG 1 cut(s) 512
Bst2UI CCWGG 1 cut(s) 629
Bst4CI ACNGT 1 cut(s) 1353
BstACI GRCGYC 1 cut(s) 69
BstBI TTCGAA 2 cut(s) 258, 1015
BstC8I GCNNGC 1 cut(s) 178
BstDEI CTNAG 1 cut(s) 336
BstDSI CCRYGG 1 cut(s) 490
BstENI CCTNNNNNAGG 1 cut(s) 1114
BstF5I GGATG 1 cut(s) 1150
BstFNI CGCG 2 cut(s) 11, 898
BstH2I RGCGCY 2 cut(s) 343, 649
BstHHI GCGC 2 cut(s) 342, 648
BstKTI GATC 7 cut(s) 37, 372, 469, 634, 892, 1048, 1126
BstMAI GTCTC 4 cut(s) 24, 316, 594, 993
BstMBI GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
BstMCI CGRYCG 2 cut(s) 9, 902
BstMWI GCNNNNNNNGC 3 cut(s) 182, 390, 971
BstNI CCWGG 1 cut(s) 629
BstNSI RCATGY 1 cut(s) 1013
BstPAI GACNNNNGTC 1 cut(s) 782
BstSCI CCNGG 2 cut(s) 99, 627
BstUI CGCG 2 cut(s) 11, 898
BstV1I GCAGC 3 cut(s) 271, 306, 993
BstV2I GAAGAC 2 cut(s) 209, 1355
BstX2I RGATCY 1 cut(s) 1123
BstYI RGATCY 1 cut(s) 1123
BstZ17I GTATAC 1 cut(s) 1078
BstZI CGGCCG 1 cut(s) 899
BsuRI GGCC 3 cut(s) 503, 560, 901
BtgI CCRYGG 1 cut(s) 490
BtsCI GGATG 1 cut(s) 1150
BtsIMutI CAGTG 1 cut(s) 1318
BveI ACCTGC 1 cut(s) 732
Cac8I GCNNGC 1 cut(s) 178
CaiI CAGNNNCTG 1 cut(s) 1126
CciI TCATGA 1 cut(s) 366
CciNI GCGGCCGC 1 cut(s) 899
CfoI GCGC 2 cut(s) 342, 648
Cfr10I RCCGGY 2 cut(s) 65, 454
Cfr13I GGNCC 2 cut(s) 94, 1107
CseI GACGC 2 cut(s) 58, 852
Csp6I GTAC 1 cut(s) 1321
CspAI ACCGGT 1 cut(s) 454
CviAII CATG 7 cut(s) 32, 85, 89, 272, 367, 491, 1010
CviQI GTAC 1 cut(s) 1321
DdeI CTNAG 1 cut(s) 336
DpnI GATC 7 cut(s) 36, 371, 468, 633, 891, 1047, 1125
DpnII GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
DrdI GACNNNNNNGTC 1 cut(s) 659
DseDI GACNNNNNNGTC 1 cut(s) 659
EaeI YGGCCR 3 cut(s) 501, 558, 899
EagI CGGCCG 1 cut(s) 899
Ecl136II GAGCTC 1 cut(s) 136
EclXI CGGCCG 1 cut(s) 899
Eco130I CCWWGG 2 cut(s) 490, 1202
Eco24I GRGCYC 1 cut(s) 138
Eco47I GGWCC 2 cut(s) 94, 1107
Eco47III AGCGCT 2 cut(s) 341, 647
Eco52I CGGCCG 1 cut(s) 899
Eco53kI GAGCTC 1 cut(s) 136
Eco57I CTGAAG 1 cut(s) 444
EcoICRI GAGCTC 1 cut(s) 136
EcoNI CCTNNNNNAGG 1 cut(s) 1114
EcoO109I RGGNCCY 1 cut(s) 1107
EcoRII CCWGG 1 cut(s) 627
EcoT14I CCWWGG 2 cut(s) 490, 1202
EcoT22I ATGCAT 1 cut(s) 90
EcoT38I GRGCYC 1 cut(s) 138
ErhI CCWWGG 2 cut(s) 490, 1202
FaeI CATG 7 cut(s) 35, 88, 92, 275, 370, 494, 1013
FaqI GGGAC 1 cut(s) 1120
FatI CATG 7 cut(s) 31, 84, 88, 271, 366, 490, 1009
FauI CCCGC 2 cut(s) 389, 1339
FbaI TGATCA 1 cut(s) 1045
FblI GTMKAC 1 cut(s) 1077
Fnu4HI GCNGC 7 cut(s) 285, 295, 555, 558, 899, 902, 1007
FokI GGATG 1 cut(s) 1157
FriOI GRGCYC 1 cut(s) 138
Fsp4HI GCNGC 7 cut(s) 285, 295, 555, 558, 899, 902, 1007
FspBI CTAG 5 cut(s) 186, 390, 848, 1203, 1369
GlaI GCGC 2 cut(s) 341, 647
GluI GCNGC 7 cut(s) 285, 295, 555, 558, 899, 902, 1007
GsaI CCCAGC 1 cut(s) 1058
GsuI CTGGAG 1 cut(s) 469
HaeII RGCGCY 2 cut(s) 343, 649
HaeIII GGCC 3 cut(s) 503, 560, 901
HapII CCGG 3 cut(s) 66, 101, 455
HgaI GACGC 2 cut(s) 58, 852
HhaI GCGC 2 cut(s) 342, 648
Hin1I GRCGYC 1 cut(s) 69
Hin1II CATG 7 cut(s) 35, 88, 92, 275, 370, 494, 1013
Hin6I GCGC 2 cut(s) 340, 646
HinP1I GCGC 2 cut(s) 340, 646
HinfI GANTC 4 cut(s) 17, 538, 697, 986
HpaII CCGG 3 cut(s) 66, 101, 455
HphI GGTGA 1 cut(s) 1175
Hpy166II GTNNAC 3 cut(s) 97, 929, 1078
Hpy188I TCNGA 9 cut(s) 205, 222, 424, 471, 548, 599, 808, 1128, 1328
Hpy188III TCNNGA 3 cut(s) 367, 787, 1043
Hpy8I GTNNAC 3 cut(s) 97, 929, 1078
Hpy99I CGWCG 2 cut(s) 74, 123
HpyAV CCTTC 6 cut(s) 217, 419, 903, 1011, 1031, 1240
HpyCH4III ACNGT 1 cut(s) 1353
HpyCH4IV ACGT 4 cut(s) 121, 444, 925, 1323
HpyCH4V TGCA 9 cut(s) 88, 180, 247, 294, 348, 666, 741, 839, 1009
HpyF10VI GCNNNNNNNGC 3 cut(s) 182, 390, 971
HpyF3I CTNAG 1 cut(s) 336
HpySE526I ACGT 4 cut(s) 121, 444, 925, 1323
Hsp92I GRCGYC 1 cut(s) 69
Hsp92II CATG 7 cut(s) 35, 88, 92, 275, 370, 494, 1013
HspAI GCGC 2 cut(s) 340, 646
Ksp22I TGATCA 1 cut(s) 1045
Kzo9I GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
LmnI GCTCC 3 cut(s) 141, 168, 488
Lsp1109I GCAGC 3 cut(s) 271, 306, 993
LweI GCATC 2 cut(s) 799, 1138
MaeI CTAG 5 cut(s) 186, 390, 848, 1203, 1369
MaeII ACGT 4 cut(s) 121, 444, 925, 1323
MaeIII GTNAC 1 cut(s) 615
MalI GATC 7 cut(s) 36, 371, 468, 633, 891, 1047, 1125
MboI GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
MboII GAAGA 4 cut(s) 209, 652, 1255, 1355
MflI RGATCY 1 cut(s) 1123
MhlI GDGCHC 1 cut(s) 138
MlsI TGGCCA 1 cut(s) 503
MluNI TGGCCA 1 cut(s) 503
MlyI GAGTC 1 cut(s) 26
MmeI TCCRAC 2 cut(s) 823, 1351
MnlI CCTC 9 cut(s) 85, 150, 388, 465, 582, 957, 1110, 1311, 1311
Mox20I TGGCCA 1 cut(s) 503
Mph1103I ATGCAT 1 cut(s) 90
MroXI GAANNNNTTC 2 cut(s) 542, 912
MscI TGGCCA 1 cut(s) 503
MseI TTAA 2 cut(s) 156, 756
MslI CAYNNNNRTG 2 cut(s) 708, 825
Msp20I TGGCCA 1 cut(s) 503
MspI CCGG 3 cut(s) 66, 101, 455
MspR9I CCNGG 2 cut(s) 101, 629
MvaI CCWGG 1 cut(s) 629
MvnI CGCG 2 cut(s) 11, 898
MwoI GCNNNNNNNGC 3 cut(s) 182, 390, 971
NciI CCSGG 1 cut(s) 101
NcoI CCATGG 1 cut(s) 490
NdeII GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
NlaIII CATG 7 cut(s) 35, 88, 92, 275, 370, 494, 1013
NlaIV GGNNCC 4 cut(s) 459, 484, 1108, 1208
NotI GCGGCCGC 1 cut(s) 899
NsiI ATGCAT 1 cut(s) 90
NspI RCATGY 1 cut(s) 1013
NspV TTCGAA 2 cut(s) 258, 1015
PagI TCATGA 1 cut(s) 366
PcsI WCGNNNNNNNCGW 1 cut(s) 21
PdmI GAANNNNTTC 2 cut(s) 542, 912
PfeI GAWTC 3 cut(s) 538, 697, 986
PfoI TCCNGGA 1 cut(s) 627
PinAI ACCGGT 1 cut(s) 454
PkrI GCNGC 7 cut(s) 286, 296, 556, 559, 900, 903, 1008
PleI GAGTC 1 cut(s) 25
PpsI GAGTC 1 cut(s) 25
PpuMI RGGWCCY 1 cut(s) 1107
PshAI GACNNNNGTC 1 cut(s) 782
Psp124BI GAGCTC 1 cut(s) 138
Psp1406I AACGTT 1 cut(s) 444
Psp5II RGGWCCY 1 cut(s) 1107
Psp6I CCWGG 1 cut(s) 627
PspFI CCCAGC 1 cut(s) 1054
PspGI CCWGG 1 cut(s) 627
PspN4I GGNNCC 4 cut(s) 459, 484, 1108, 1208
PspPI GGNCC 2 cut(s) 94, 1107
PspPPI RGGWCCY 1 cut(s) 1107
PstNI CAGNNNCTG 1 cut(s) 1126
PsuI RGATCY 1 cut(s) 1123
RsaI GTAC 1 cut(s) 1322
RsaNI GTAC 1 cut(s) 1321
RseI CAYNNNNRTG 2 cut(s) 708, 825
SacI GAGCTC 1 cut(s) 138
SaqAI TTAA 2 cut(s) 156, 756
SatI GCNGC 7 cut(s) 285, 295, 555, 558, 899, 902, 1007
Sau3AI GATC 7 cut(s) 34, 369, 466, 631, 889, 1045, 1123
Sau96I GGNCC 2 cut(s) 94, 1107
SchI GAGTC 1 cut(s) 26
ScrFI CCNGG 2 cut(s) 101, 629
SduI GDGCHC 1 cut(s) 138
SfaNI GCATC 2 cut(s) 799, 1138
SfuI TTCGAA 2 cut(s) 258, 1015
SinI GGWCC 2 cut(s) 94, 1107
SmiMI CAYNNNNRTG 2 cut(s) 708, 825
SsiI CCGC 9 cut(s) 11, 382, 554, 557, 701, 898, 902, 1284, 1332
SspI AATATT 1 cut(s) 734
SspMI CTAG 5 cut(s) 186, 390, 848, 1203, 1369
SstI GAGCTC 1 cut(s) 138
StyD4I CCNGG 2 cut(s) 99, 627
StyI CCWWGG 2 cut(s) 490, 1202
TaaI ACNGT 1 cut(s) 1353
TaiI ACGT 4 cut(s) 124, 447, 928, 1326
TaqI TCGA 4 cut(s) 72, 258, 786, 1015
TauI GCSGC 4 cut(s) 557, 560, 901, 904
TfiI GAWTC 3 cut(s) 538, 697, 986
Tru1I TTAA 2 cut(s) 156, 756
Tru9I TTAA 2 cut(s) 156, 756
TscAI CASTG 1 cut(s) 1318
TseI GCWGC 3 cut(s) 284, 294, 1006
TspDTI ATGAA 5 cut(s) 413, 554, 742, 843, 1259
TspRI CASTG 1 cut(s) 1318
VpaK11BI GGWCC 2 cut(s) 94, 1107
XagI CCTNNNNNAGG 1 cut(s) 1114
XapI RAATTY 5 cut(s) 75, 517, 831, 1195, 1216
XceI RCATGY 1 cut(s) 1013
XmaJI CCTAGG 1 cut(s) 1202
XmiI GTMKAC 1 cut(s) 1077
XmnI GAANNNNTTC 2 cut(s) 542, 912
XspI CTAG 5 cut(s) 186, 390, 848, 1203, 1369
Zsp2I ATGCAT 1 cut(s) 90
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.