RLG00000026077

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000064
Physical Location & Seq
Forward (+)
371446 .. 373769
2324 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000026077

Sequence Viewer

Length: 1443 bp
ATGGCCGATACTCTCACCGGACCATTGCATCATTGTTGTTCTCGGCTTTGTCGACACATATGGATATTGCTGCTGTTACCCTCACAAAAAGTTACCCCATTAGAATGGGCAACTCTCCCCGAACTACCTCTCTCCTTGGTTCTTGATAATTTGTTAGAACCAATTGACCATGTCCGTTTTGGCGTTGTTTGCAAGCAATGGCATTCTTTTGCAACAACCTATCTTCAAACAAATCAACGCAACCAGAAGCCACTTCCGTTGCTTATAATCCCACCACCACCTAAATCCGTATCTGAATCCCATGATCATTCCCAAGCAAAGACCCGAACAAGTCAAGTATACAGCATTTCCGAGGCAAAAGTATACAACAACATTCACTTATCACTTCCTTACTGTACGAAAAGGTGTTGCGGCTTGTCCCATGGTTGGTTAGCCACAGTAGATGAGCATCGTGCTATTACTCTCCATAACCCTTTCCAAAACGCAGCCGAGCCCATTCGTCTCCCTCCTTTGGATTTCGTCACTGTCCGAAAGAAACACAAATCTCTCTATGAATATTACGTCTTAAAAGTTGTTCTGTCAGCCGATCCTATTCTAAATCCCGATGACTATGTGGTTGCGGTACTCTGTGATTTTATTGCCAAGTTGGCTTTCATAAAAAAAGGCCAAACGAGTTGGACTCACATCACCACTCCTGAAGACCTTTACTTGAATGATGTCGTGTTTCATAGAGGTAAAATATACGCAGTCGGAAATATGGGGTTCATGTTCGTCATCGACTTTAATAGCAATAAAGCAAGACCGGAAGTAAAGAGACTTGAACCTAGTAAACGGTTCCTGTTTTATGCAGTTCGTGATTATCTTGTGGAATCAACAACGGGAGACCTATTGCATGCCCGTAGAATAAGATTATATGGTATTGGTATCGATTCCCACACTCTCGAGACCTTTGAGGTCTGCAGGTTGGTGTTTGACGAAGAGAATGGTACCGTAGAACATGTTAGGGTAAGGAGCATTGGAGATGAGGCTTTCTTCGTCGGCGACAATCACTCCGTCTCTGTTTTGGCTTCAAACTTTCCTGGATGCCAGCCGAATTCCATGTACTACACAGATGATTTGACATTTTTTAAACCCTTCGGACCTGCTGATGATCTAGAACCGTGTGATGAAATTGAACCTGAGTCACCACCGCTGATCCCTCCACCTGTGCTTTACTACGGCCCGGACCAGTCTGCTTCGTCCCACGACAAGGCAAACACTGTTGCTCCTCGACCAAAGCCGAGACACGATCAACCGGCGAAAACAACCGATCAAGCACAGAAGATCAATTCGCCCTACCCAAATTCAATCACCCTGAAACCAGAAGCCTCTGCGACCCATTCCTGCCGCAACCCTCGAGATCGATCTCCCACAACGTTGGGAAGCACGACAAACATCGCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

481

Amino Acids

54.16

Weight (kDa)

6.72

Isoelectric Point (pI)

43.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 113 - 377 1.2e-53 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 266
Acc36I ACCTGC 2 cut(s) 951, 1150
Acc65I GGTACC 1 cut(s) 986
AccB1I GGYRCC 1 cut(s) 986
AccI GTMKAC 3 cut(s) 52, 339, 363
AciI CCGC 4 cut(s) 411, 620, 1190, 1387
AclI AACGTT 1 cut(s) 1415
AclWI GGATC 2 cut(s) 581, 1189
AcoI YGGCCR 1 cut(s) 3
AcsI RAATTY 2 cut(s) 1093, 1342
AcuI CTGAAG 1 cut(s) 717
AfaI GTAC 4 cut(s) 397, 624, 988, 1103
AfiI CCNNNNNNNGG 3 cut(s) 426, 511, 1249
AflIII ACRYGT 1 cut(s) 997
AgsI TTSAA 6 cut(s) 227, 712, 821, 1071, 1175, 1347
AjnI CCWGG 1 cut(s) 1078
AjuI GAANNNNNNNTTGG 2 cut(s) 635, 667
Alw26I GTCTC 6 cut(s) 506, 808, 876, 938, 1060, 1276
AlwI GGATC 2 cut(s) 581, 1189
Ama87I CYCGRG 2 cut(s) 941, 1395
AoxI GGCC 3 cut(s) 3, 664, 1219
ApeKI GCWGC 2 cut(s) 70, 485
ApoI RAATTY 2 cut(s) 1093, 1342
Asp718I GGTACC 1 cut(s) 986
AspS9I GGNCC 4 cut(s) 20, 1139, 1220, 1225
AsuC2I CCSGG 1 cut(s) 1223
AsuHPI GGTGA 4 cut(s) 7, 679, 1176, 1342
AvaI CYCGRG 2 cut(s) 941, 1395
AvaII GGWCC 3 cut(s) 20, 1139, 1225
BanI GGYRCC 1 cut(s) 986
BanII GRGCYC 1 cut(s) 495
BbsI GAAGAC 1 cut(s) 705
BbvI GCAGC 2 cut(s) 57, 497
BceAI ACGGC 1 cut(s) 1234
BciT130I CCWGG 1 cut(s) 1080
BclI TGATCA 1 cut(s) 304
BcnI CCSGG 1 cut(s) 1223
BcoDI GTCTC 6 cut(s) 506, 808, 876, 938, 1060, 1276
BfaI CTAG 3 cut(s) 825, 1154, 1441
BfmI CTRYAG 1 cut(s) 958
BfuAI ACCTGC 2 cut(s) 951, 1150
BglI GCCNNNNNGGC 1 cut(s) 647
BisI GCNGC 4 cut(s) 71, 412, 486, 1387
BlsI GCNGC 4 cut(s) 72, 413, 487, 1388
Bme1390I CCNGG 2 cut(s) 1080, 1223
Bme18I GGWCC 3 cut(s) 20, 1139, 1225
BmeT110I CYCGRG 2 cut(s) 941, 1395
BmgT120I GGNCC 4 cut(s) 20, 1139, 1220, 1225
BmiI GGNNCC 2 cut(s) 836, 988
BmrFI CCNGG 2 cut(s) 1080, 1223
BmsI GCATC 3 cut(s) 37, 457, 1073
BpiI GAAGAC 1 cut(s) 705
BplI GAGNNNNNCTC 2 cut(s) 664, 696
BpuMI CCSGG 1 cut(s) 1223
Bsa29I ATCGAT 2 cut(s) 927, 1402
BsaBI GATNNNNATC 1 cut(s) 447
BsaI GGTCTC 2 cut(s) 876, 938
BsaJI CCNNGG 3 cut(s) 135, 351, 421
BsaWI WCCGGW 2 cut(s) 17, 802
BsaXI ACNNNNNCTCC 4 cut(s) 1034, 1064, 1249, 1279
Bsc4I CCNNNNNNNGG 3 cut(s) 426, 511, 1249
Bse118I RCCGGY 1 cut(s) 1294
Bse1I ACTGG 1 cut(s) 1228
Bse3DI GCAATG 2 cut(s) 23, 203
Bse8I GATNNNNATC 1 cut(s) 447
BseBI CCWGG 1 cut(s) 1080
BseCI ATCGAT 2 cut(s) 927, 1402
BseDI CCNNGG 3 cut(s) 135, 351, 421
BseGI GGATG 1 cut(s) 1088
BseJI GATNNNNATC 1 cut(s) 447
BseLI CCNNNNNNNGG 3 cut(s) 426, 511, 1249
BseMI GCAATG 2 cut(s) 23, 203
BseMII CTCAG 1 cut(s) 1170
BseNI ACTGG 1 cut(s) 1228
BseRI GAGGAG 1 cut(s) 1257
BseXI GCAGC 2 cut(s) 57, 497
BshFI GGCC 3 cut(s) 5, 666, 1221
BshNI GGYRCC 1 cut(s) 986
BshVI ATCGAT 2 cut(s) 927, 1402
BsiHKCI CYCGRG 2 cut(s) 941, 1395
BsiSI CCGG 4 cut(s) 18, 803, 1223, 1295
BslFI GGGAC 2 cut(s) 403, 1225
BslI CCNNNNNNNGG 3 cut(s) 426, 511, 1249
BsmAI GTCTC 6 cut(s) 506, 808, 876, 938, 1060, 1276
BsmBI CGTCTC 2 cut(s) 506, 1060
BsmFI GGGAC 2 cut(s) 403, 1225
BsmI GAATGC 1 cut(s) 202
BsnI GGCC 3 cut(s) 5, 666, 1221
Bso31I GGTCTC 2 cut(s) 876, 938
BsoBI CYCGRG 2 cut(s) 941, 1395
Bsp1286I GDGCHC 1 cut(s) 495
Bsp143I GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
Bsp19I CCATGG 1 cut(s) 421
BspACI CCGC 4 cut(s) 411, 620, 1190, 1387
BspANI GGCC 3 cut(s) 5, 666, 1221
BspCNI CTCAG 1 cut(s) 1171
BspDI ATCGAT 2 cut(s) 927, 1402
BspLI GGNNCC 2 cut(s) 836, 988
BspMAI CTGCAG 1 cut(s) 962
BspMI ACCTGC 2 cut(s) 951, 1150
BspPI GGATC 2 cut(s) 581, 1189
BspT107I GGYRCC 1 cut(s) 986
BspTNI GGTCTC 2 cut(s) 876, 938
BsrDI GCAATG 2 cut(s) 23, 203
BsrFI RCCGGY 1 cut(s) 1294
BsrI ACTGG 1 cut(s) 1228
BssAI RCCGGY 1 cut(s) 1294
BssECI CCNNGG 3 cut(s) 135, 351, 421
BssMI GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
BssNAI GTATAC 2 cut(s) 340, 364
BssT1I CCWWGG 2 cut(s) 135, 421
Bst1107I GTATAC 2 cut(s) 340, 364
Bst2UI CCWGG 1 cut(s) 1080
Bst4CI ACNGT 7 cut(s) 395, 439, 526, 834, 991, 1161, 1261
Bst6I CTCTTC 1 cut(s) 972
BstC8I GCNNGC 3 cut(s) 194, 894, 1088
BstDEI CTNAG 1 cut(s) 1179
BstDSI CCRYGG 1 cut(s) 421
BstF5I GGATG 1 cut(s) 1088
BstKTI GATC 9 cut(s) 307, 589, 1153, 1197, 1291, 1312, 1326, 1402, 1406
BstMAI GTCTC 6 cut(s) 506, 808, 876, 938, 1060, 1276
BstMBI GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
BstMWI GCNNNNNNNGC 2 cut(s) 189, 647
BstNI CCWGG 1 cut(s) 1080
BstNSI RCATGY 2 cut(s) 896, 1001
BstSCI CCNGG 2 cut(s) 1078, 1221
BstSFI CTRYAG 1 cut(s) 958
BstV1I GCAGC 2 cut(s) 57, 497
BstV2I GAAGAC 1 cut(s) 705
BstXI CCANNNNNNTGG 2 cut(s) 105, 1417
BstZ17I GTATAC 2 cut(s) 340, 364
Bsu15I ATCGAT 2 cut(s) 927, 1402
BsuRI GGCC 3 cut(s) 5, 666, 1221
BsuTUI ATCGAT 2 cut(s) 927, 1402
BtgI CCRYGG 1 cut(s) 421
BtgZI GCGATG 1 cut(s) 1420
BtsCI GGATG 1 cut(s) 1088
BtsIMutI CAGTG 2 cut(s) 522, 1257
BveI ACCTGC 2 cut(s) 951, 1150
Cac8I GCNNGC 3 cut(s) 194, 894, 1088
Cfr10I RCCGGY 1 cut(s) 1294
Cfr13I GGNCC 4 cut(s) 20, 1139, 1220, 1225
ClaI ATCGAT 2 cut(s) 927, 1402
Csp6I GTAC 4 cut(s) 396, 623, 987, 1102
CspCI CAANNNNNGTGG 2 cut(s) 240, 275
CviAII CATG 7 cut(s) 170, 302, 422, 766, 893, 998, 1099
CviQI GTAC 4 cut(s) 396, 623, 987, 1102
DdeI CTNAG 1 cut(s) 1179
DpnI GATC 9 cut(s) 306, 588, 1152, 1196, 1290, 1311, 1325, 1401, 1405
DpnII GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
DraI TTTAAA 1 cut(s) 1129
EaeI YGGCCR 1 cut(s) 3
Eam1104I CTCTTC 1 cut(s) 972
EarI CTCTTC 1 cut(s) 972
Eco130I CCWWGG 2 cut(s) 135, 421
Eco24I GRGCYC 1 cut(s) 495
Eco31I GGTCTC 2 cut(s) 876, 938
Eco47I GGWCC 3 cut(s) 20, 1139, 1225
Eco57I CTGAAG 1 cut(s) 717
Eco88I CYCGRG 2 cut(s) 941, 1395
EcoRI GAATTC 1 cut(s) 1093
EcoRII CCWGG 1 cut(s) 1078
EcoT14I CCWWGG 2 cut(s) 135, 421
EcoT38I GRGCYC 1 cut(s) 495
ErhI CCWWGG 2 cut(s) 135, 421
Esp3I CGTCTC 2 cut(s) 506, 1060
FaeI CATG 7 cut(s) 173, 305, 425, 769, 896, 1001, 1102
FaqI GGGAC 2 cut(s) 403, 1225
FatI CATG 7 cut(s) 169, 301, 421, 765, 892, 997, 1098
FauNDI CATATG 1 cut(s) 59
FbaI TGATCA 1 cut(s) 304
FblI GTMKAC 3 cut(s) 52, 339, 363
Fnu4HI GCNGC 4 cut(s) 71, 412, 486, 1387
FokI GGATG 1 cut(s) 1095
FriOI GRGCYC 1 cut(s) 495
Fsp4HI GCNGC 4 cut(s) 71, 412, 486, 1387
FspBI CTAG 3 cut(s) 825, 1154, 1441
GluI GCNGC 4 cut(s) 71, 412, 486, 1387
HaeIII GGCC 3 cut(s) 5, 666, 1221
HapII CCGG 4 cut(s) 18, 803, 1223, 1295
Hin1II CATG 7 cut(s) 173, 305, 425, 769, 896, 1001, 1102
HincII GTYRAC 1 cut(s) 53
HindII GTYRAC 1 cut(s) 53
HinfI GANTC 5 cut(s) 296, 679, 869, 929, 1181
HpaII CCGG 4 cut(s) 18, 803, 1223, 1295
HphI GGTGA 4 cut(s) 7, 679, 1176, 1342
Hpy166II GTNNAC 4 cut(s) 53, 340, 364, 830
Hpy188I TCNGA 5 cut(s) 295, 352, 530, 752, 1139
Hpy188III TCNNGA 8 cut(s) 143, 602, 695, 854, 941, 943, 1154, 1397
Hpy8I GTNNAC 4 cut(s) 53, 340, 364, 830
Hpy99I CGWCG 1 cut(s) 1040
HpyAV CCTTC 1 cut(s) 1144
HpyCH4III ACNGT 7 cut(s) 395, 439, 526, 834, 991, 1161, 1261
HpyCH4IV ACGT 2 cut(s) 561, 1415
HpyCH4V TGCA 6 cut(s) 28, 192, 212, 848, 892, 960
HpyF10VI GCNNNNNNNGC 2 cut(s) 189, 647
HpyF3I CTNAG 1 cut(s) 1179
HpySE526I ACGT 2 cut(s) 561, 1415
Hsp92II CATG 7 cut(s) 173, 305, 425, 769, 896, 1001, 1102
KpnI GGTACC 1 cut(s) 990
Ksp22I TGATCA 1 cut(s) 304
Kzo9I GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
LmnI GCTCC 2 cut(s) 1011, 1270
Lsp1109I GCAGC 2 cut(s) 57, 497
LweI GCATC 3 cut(s) 37, 457, 1073
MaeI CTAG 3 cut(s) 825, 1154, 1441
MaeII ACGT 2 cut(s) 561, 1415
MaeIII GTNAC 4 cut(s) 75, 91, 520, 1182
MalI GATC 9 cut(s) 306, 588, 1152, 1196, 1290, 1311, 1325, 1401, 1405
MboI GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
MboII GAAGA 5 cut(s) 215, 710, 989, 1024, 1333
MfeI CAATTG 1 cut(s) 162
MhlI GDGCHC 1 cut(s) 495
MluCI AATT 6 cut(s) 148, 162, 1093, 1170, 1327, 1342
MlyI GAGTC 2 cut(s) 673, 1190
MmeI TCCRAC 2 cut(s) 656, 730
MseI TTAA 3 cut(s) 566, 783, 1128
MslI CAYNNNNRTG 1 cut(s) 103
MspA1I CMGCKG 1 cut(s) 1192
MspI CCGG 4 cut(s) 18, 803, 1223, 1295
MspR9I CCNGG 2 cut(s) 1080, 1223
MunI CAATTG 1 cut(s) 162
Mva1269I GAATGC 1 cut(s) 202
MvaI CCWGG 1 cut(s) 1080
MwoI GCNNNNNNNGC 2 cut(s) 189, 647
NciI CCSGG 1 cut(s) 1223
NcoI CCATGG 1 cut(s) 421
NdeI CATATG 1 cut(s) 59
NdeII GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
NlaIII CATG 7 cut(s) 173, 305, 425, 769, 896, 1001, 1102
NlaIV GGNNCC 2 cut(s) 836, 988
NmeAIII GCCGAG 3 cut(s) 22, 514, 1305
NmuCI GTSAC 2 cut(s) 520, 1182
NspI RCATGY 2 cut(s) 896, 1001
PaeI GCATGC 1 cut(s) 896
PaeR7I CTCGAG 2 cut(s) 941, 1395
PciI ACATGT 1 cut(s) 997
PcsI WCGNNNNNNNCGW 1 cut(s) 49
PctI GAATGC 1 cut(s) 202
PfeI GAWTC 3 cut(s) 296, 869, 929
PflFI GACNNNGTC 1 cut(s) 170
PfoI TCCNGGA 1 cut(s) 1078
PkrI GCNGC 4 cut(s) 72, 413, 487, 1388
PleI GAGTC 2 cut(s) 673, 1189
PpsI GAGTC 2 cut(s) 673, 1189
PscI ACATGT 1 cut(s) 997
PsiI TTATAA 1 cut(s) 266
Psp1406I AACGTT 1 cut(s) 1415
Psp6I CCWGG 1 cut(s) 1078
PspGI CCWGG 1 cut(s) 1078
PspN4I GGNNCC 2 cut(s) 836, 988
PspPI GGNCC 4 cut(s) 20, 1139, 1220, 1225
PstI CTGCAG 1 cut(s) 962
PsyI GACNNNGTC 1 cut(s) 170
RsaI GTAC 4 cut(s) 397, 624, 988, 1103
RsaNI GTAC 4 cut(s) 396, 623, 987, 1102
RseI CAYNNNNRTG 1 cut(s) 103
SalI GTCGAC 1 cut(s) 51
SaqAI TTAA 3 cut(s) 566, 783, 1128
SatI GCNGC 4 cut(s) 71, 412, 486, 1387
Sau3AI GATC 9 cut(s) 304, 586, 1150, 1194, 1288, 1309, 1323, 1399, 1403
Sau96I GGNCC 4 cut(s) 20, 1139, 1220, 1225
SchI GAGTC 2 cut(s) 673, 1190
ScrFI CCNGG 2 cut(s) 1080, 1223
SduI GDGCHC 1 cut(s) 495
SfaNI GCATC 3 cut(s) 37, 457, 1073
SfcI CTRYAG 1 cut(s) 958
Sfr274I CTCGAG 2 cut(s) 941, 1395
SinI GGWCC 3 cut(s) 20, 1139, 1225
SlaI CTCGAG 2 cut(s) 941, 1395
SmiMI CAYNNNNRTG 1 cut(s) 103
SmlI CTYRAG 2 cut(s) 941, 1395
SmoI CTYRAG 2 cut(s) 941, 1395
SphI GCATGC 1 cut(s) 896
Sse9I AATT 6 cut(s) 148, 162, 1093, 1170, 1327, 1342
SsiI CCGC 4 cut(s) 411, 620, 1190, 1387
SspI AATATT 1 cut(s) 557
SspMI CTAG 3 cut(s) 825, 1154, 1441
StyD4I CCNGG 2 cut(s) 1078, 1221
StyI CCWWGG 2 cut(s) 135, 421
TaaI ACNGT 7 cut(s) 395, 439, 526, 834, 991, 1161, 1261
TaiI ACGT 2 cut(s) 564, 1418
TaqI TCGA 7 cut(s) 52, 777, 927, 942, 1270, 1396, 1402
TasI AATT 6 cut(s) 148, 162, 1093, 1170, 1327, 1342
TatI WGTACW 1 cut(s) 1101
TauI GCSGC 2 cut(s) 414, 1389
TfiI GAWTC 3 cut(s) 296, 869, 929
Tru1I TTAA 3 cut(s) 566, 783, 1128
Tru9I TTAA 3 cut(s) 566, 783, 1128
TscAI CASTG 2 cut(s) 529, 1264
TseFI GTSAC 2 cut(s) 520, 1182
TseI GCWGC 2 cut(s) 70, 485
Tsp45I GTSAC 2 cut(s) 520, 1182
TspDTI ATGAA 5 cut(s) 567, 643, 716, 754, 1182
TspGWI ACGGA 4 cut(s) 164, 246, 277, 1042
TspRI CASTG 2 cut(s) 529, 1264
Tth111I GACNNNGTC 1 cut(s) 170
VpaK11BI GGWCC 3 cut(s) 20, 1139, 1225
XapI RAATTY 2 cut(s) 1093, 1342
XbaI TCTAGA 1 cut(s) 1153
XceI RCATGY 2 cut(s) 896, 1001
XcmI CCANNNNNNNNNTGG 1 cut(s) 176
XhoI CTCGAG 2 cut(s) 941, 1395
XmiI GTMKAC 3 cut(s) 52, 339, 363
XspI CTAG 3 cut(s) 825, 1154, 1441
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.