Rmu_sc0001195.1_g000007

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001195.1
OG0000064
Physical Location & Seq
Forward (+)
40129 .. 43440
3312 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001195.1_g000007.1.cds

Sequence Viewer

Length: 1671 bp
atggtcgcgtggttgcggggtcacggtgtcgcgggcatgtcgctggcgtgtcgctgggttattggcgtgtcgcggatgtgtcgctgtgtcgcagggtcgaggtgttgcgagaatgcagagcctggagaatgcggggccgcgaggatgctgaaccgcgaggatgcggagccgcgaagaaggggagtcgcgagggcaggtgagcgttcgcgggagaagctagcgcgcgcgaggggtgcggagttgtgggggtcgagcgaggaggcgagctttcgcaggaaaagcaaacgagcacgaaggtataaggcaagcaggtcttgcgggagtgaggacaggaggcaagcggggcttgcaggtgctgcaagggctgcgaggctaacttgggctcgtgctgataacgaacatggctgctacctccgtaaatacctattggcagggtggtctagtcttcctcaagtcattctctcagagattctggataagttgttggaaccaactgaccatgtttgttttgctgccgtttgcaaggaatggcatgctctcgcaacagactataaccacacaacccagcgttgttttaaggtgcatcccatgcttatgatcccttcagaatcccaaggaaagcgaaaactatacagcatctctgagcaaaaggtctacaacaactttgagttaccacaagcttataacagctctaagaggtgttgtggctcgagtaatgctccaggttggttggtcgcagtagatcaactaggcgaacatcaactcagtacaacacttgtgaacgtgttcaaaagagatgtgacgcccattcgtctacctccgttggatttcaatgcccagagtcattggttcagggttttctccccaaaggttatcttatccgctgatccgattgcgaatcctgacaattatgtggctgtggcagtttatgatagagtttcaaggtttgctttcataaaaggaggccgggacaaacaatctggacttaccttgaggtccgctccttctttactgatgctatattttataaaagaaaagtctatgcggtcggacaatggggacggattaccttgtttgatgttaatagcaagccagtacaagaaaatttacttacacatggaggatatccgttttcatgttatgcgcataaggagacttgtggaaacaaccaaaggagacttgttacatgttcgaagatttttgaaactgaaggatgtaccacgagatcactatttccattatgaggataatgagttctggaccgagagcttcaaggtttacaaggtggtgtttgatgagagggacgaatccattgtggagcatgttgagttaaagagtattggagatgaggctttgtttgtcggtgacaatcattcgatgtgtgttttggcttcaaactttcctgggtgtcaaccaaattctatatactacacggatgatttgatcgaacttggagaagtgcgattagttgatgatggatcaattgatatggacgacatcttcagtttagtcaataagctagaggatgaaaccatctctaatggaccaagtgatatgggcatcttcaatttagaggatggaagcattacacaacattattctctaaatccttggcacaggaacatcccacctgctatctggatcatgccattgtttaatggactcggctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

556

Amino Acids

63.14

Weight (kDa)

8.48

Isoelectric Point (pI)

44.0

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 684, 1028
AarI CACCTGC 3 cut(s) 185, 341, 1639
Acc16I TGCGCA 1 cut(s) 1145
Acc36I ACCTGC 4 cut(s) 185, 300, 341, 1639
AccBSI CCGCTC 1 cut(s) 1001
AccI GTMKAC 2 cut(s) 654, 814
AclWI GGATC 4 cut(s) 592, 881, 1486, 1649
AcsI RAATTY 2 cut(s) 1104, 1417
AcuI CTGAAG 3 cut(s) 588, 1229, 1486
AcyI GRCGYC 1 cut(s) 803
AfaI GTAC 3 cut(s) 769, 1097, 1218
AfiI CCNNNNNNNGG 1 cut(s) 1243
AflIII ACRYGT 2 cut(s) 783, 1186
AgsI TTSAA 7 cut(s) 790, 832, 942, 1204, 1273, 1395, 1567
AjnI CCWGG 3 cut(s) 121, 721, 1402
AloI GAACNNNNNNTCC 2 cut(s) 1238, 1270
AluBI AGCT 6 cut(s) 217, 267, 680, 690, 1269, 1519
AluI AGCT 6 cut(s) 217, 267, 680, 690, 1269, 1519
Alw21I GWGCWC 1 cut(s) 292
Alw26I GTCTC 2 cut(s) 1147, 1170
AlwI GGATC 4 cut(s) 592, 881, 1486, 1649
AlwNI CAGNNNCTG 2 cut(s) 122, 356
Ama87I CYCGRG 1 cut(s) 709
AoxI GGCC 2 cut(s) 135, 964
ApeKI GCWGC 4 cut(s) 356, 365, 405, 512
ApoI RAATTY 2 cut(s) 1104, 1417
Asp700I GAANNNNTTC 1 cut(s) 785
AspLEI GCGC 4 cut(s) 223, 225, 227, 1146
AspS9I GGNCC 4 cut(s) 135, 996, 1260, 1544
AsuC2I CCSGG 1 cut(s) 968
AsuHPI GGTGA 2 cut(s) 209, 1376
AsuII TTCGAA 1 cut(s) 1192
AsuNHI GCTAGC 1 cut(s) 217
AvaI CYCGRG 1 cut(s) 709
AvaII GGWCC 3 cut(s) 996, 1260, 1544
BanII GRGCYC 1 cut(s) 385
BauI CACGAG 2 cut(s) 384, 1221
BbsI GAAGAC 1 cut(s) 437
Bbv12I GWGCWC 1 cut(s) 292
BbvI GCAGC 4 cut(s) 343, 352, 392, 499
BccI CCATC 3 cut(s) 1469, 1541, 1571
BceAI ACGGC 1 cut(s) 500
BciT130I CCWGG 3 cut(s) 123, 723, 1404
BcnI CCSGG 1 cut(s) 968
BcoDI GTCTC 2 cut(s) 1147, 1170
BfaI CTAG 4 cut(s) 218, 441, 749, 1520
BfuAI ACCTGC 4 cut(s) 185, 300, 341, 1639
BisI GCNGC 6 cut(s) 138, 170, 357, 366, 406, 513
BlsI GCNGC 6 cut(s) 139, 171, 358, 367, 407, 514
Bme1390I CCNGG 4 cut(s) 123, 723, 968, 1404
Bme18I GGWCC 3 cut(s) 996, 1260, 1544
BmeT110I CYCGRG 1 cut(s) 709
BmgT120I GGNCC 4 cut(s) 135, 996, 1260, 1544
BmiI GGNNCC 3 cut(s) 136, 168, 489
BmrFI CCNGG 4 cut(s) 123, 723, 968, 1404
BmsI GCATC 6 cut(s) 135, 151, 592, 645, 1005, 1569
BmtI GCTAGC 1 cut(s) 221
BpiI GAAGAC 1 cut(s) 437
BplI GAGNNNNNCTC 4 cut(s) 703, 735, 985, 1017
BpmI CTGGAG 2 cut(s) 144, 705
Bpu14I TTCGAA 1 cut(s) 1192
BpuEI CTTGAG 2 cut(s) 435, 1012
BpuMI CCSGG 1 cut(s) 968
BsaHI GRCGYC 1 cut(s) 803
BsaJI CCNNGG 3 cut(s) 613, 1403, 1610
Bsc4I CCNNNNNNNGG 1 cut(s) 1243
Bse1I ACTGG 1 cut(s) 1093
BseBI CCWGG 3 cut(s) 123, 723, 1404
BseDI CCNNGG 3 cut(s) 613, 1403, 1610
BseGI GGATG 9 cut(s) 81, 150, 166, 583, 1219, 1441, 1531, 1582, 1623
BseLI CCNNNNNNNGG 1 cut(s) 1243
BseMII CTCAG 3 cut(s) 477, 633, 778
BseNI ACTGG 1 cut(s) 1093
BsePI GCGCGC 2 cut(s) 221, 223
BseRI GAGGAG 1 cut(s) 272
BseXI GCAGC 4 cut(s) 343, 352, 392, 499
BseYI CCCAGC 2 cut(s) 54, 564
Bsh1285I CGRYCG 1 cut(s) 1049
BshFI GGCC 2 cut(s) 137, 966
BsiEI CGRYCG 1 cut(s) 1049
BsiHKAI GWGCWC 1 cut(s) 292
BsiHKCI CYCGRG 1 cut(s) 709
BsiSI CCGG 1 cut(s) 967
BslFI GGGAC 3 cut(s) 983, 1073, 1316
BslI CCNNNNNNNGG 1 cut(s) 1243
BsmAI GTCTC 2 cut(s) 1147, 1170
BsmFI GGGAC 3 cut(s) 983, 1073, 1316
BsmI GAATGC 2 cut(s) 118, 134
BsnI GGCC 2 cut(s) 137, 966
BsoBI CYCGRG 1 cut(s) 709
Bsp119I TTCGAA 1 cut(s) 1192
Bsp1286I GDGCHC 2 cut(s) 292, 385
Bsp143I GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
Bsp68I TCGCGA 1 cut(s) 188
BspANI GGCC 2 cut(s) 137, 966
BspCNI CTCAG 3 cut(s) 476, 634, 777
BspLI GGNNCC 3 cut(s) 136, 168, 489
BspMI ACCTGC 4 cut(s) 185, 300, 341, 1639
BspOI GCTAGC 1 cut(s) 221
BspPI GGATC 4 cut(s) 592, 881, 1486, 1649
BspT104I TTCGAA 1 cut(s) 1192
BsrBI CCGCTC 1 cut(s) 1001
BsrI ACTGG 1 cut(s) 1093
BssECI CCNNGG 3 cut(s) 613, 1403, 1610
BssHII GCGCGC 2 cut(s) 221, 223
BssMI GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
BssNI GRCGYC 1 cut(s) 803
BssSI CACGAG 2 cut(s) 384, 1221
BssT1I CCWWGG 2 cut(s) 613, 1610
Bst2BI CACGAG 2 cut(s) 384, 1221
Bst2UI CCWGG 3 cut(s) 123, 723, 1404
Bst4CI ACNGT 1 cut(s) 26
BstACI GRCGYC 1 cut(s) 803
BstAPI GCANNNNNTGC 4 cut(s) 315, 356, 365, 589
BstBI TTCGAA 1 cut(s) 1192
BstDEI CTNAG 4 cut(s) 463, 642, 693, 764
BstF5I GGATG 9 cut(s) 81, 150, 166, 583, 1219, 1441, 1531, 1582, 1623
BstHHI GCGC 4 cut(s) 223, 225, 227, 1146
BstKTI GATC 7 cut(s) 600, 745, 889, 1228, 1446, 1481, 1644
BstMAI GTCTC 2 cut(s) 1147, 1170
BstMBI GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
BstMCI CGRYCG 1 cut(s) 1049
BstNI CCWGG 3 cut(s) 123, 723, 1404
BstNSI RCATGY 4 cut(s) 40, 536, 1190, 1325
BstSCI CCNGG 4 cut(s) 121, 721, 966, 1402
BstV1I GCAGC 4 cut(s) 343, 352, 392, 499
BstV2I GAAGAC 1 cut(s) 437
BsuRI GGCC 2 cut(s) 137, 966
BtsCI GGATG 9 cut(s) 81, 150, 166, 583, 1219, 1441, 1531, 1582, 1623
BtuMI TCGCGA 1 cut(s) 188
BveI ACCTGC 4 cut(s) 185, 300, 341, 1639
CaiI CAGNNNCTG 2 cut(s) 122, 356
CfoI GCGC 4 cut(s) 223, 225, 227, 1146
Cfr13I GGNCC 4 cut(s) 135, 996, 1260, 1544
CseI GACGC 1 cut(s) 811
Csp6I GTAC 3 cut(s) 768, 1096, 1217
CviQI GTAC 3 cut(s) 768, 1096, 1217
DdeI CTNAG 4 cut(s) 463, 642, 693, 764
DpnI GATC 7 cut(s) 599, 744, 888, 1227, 1445, 1480, 1643
DpnII GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
Eco130I CCWWGG 2 cut(s) 613, 1610
Eco24I GRGCYC 1 cut(s) 385
Eco32I GATATC 1 cut(s) 1126
Eco47I GGWCC 3 cut(s) 996, 1260, 1544
Eco57I CTGAAG 3 cut(s) 588, 1229, 1486
Eco88I CYCGRG 1 cut(s) 709
EcoRII CCWGG 3 cut(s) 121, 721, 1402
EcoRV GATATC 1 cut(s) 1126
EcoT14I CCWWGG 2 cut(s) 613, 1610
EcoT38I GRGCYC 1 cut(s) 385
ErhI CCWWGG 2 cut(s) 613, 1610
FalI AAGNNNNNCTT 8 cut(s) 298, 330, 330, 362, 860, 892, 934, 966
FaqI GGGAC 3 cut(s) 983, 1073, 1316
FauI CCCGC 6 cut(s) 9, 25, 125, 201, 311, 334
FblI GTMKAC 2 cut(s) 654, 814
Fnu4HI GCNGC 6 cut(s) 138, 170, 357, 366, 406, 513
FokI GGATG 9 cut(s) 88, 157, 173, 570, 1226, 1448, 1538, 1589, 1610
FriOI GRGCYC 1 cut(s) 385
Fsp4HI GCNGC 6 cut(s) 138, 170, 357, 366, 406, 513
FspAI RTGCGCAY 1 cut(s) 1145
FspBI CTAG 4 cut(s) 218, 441, 749, 1520
FspI TGCGCA 1 cut(s) 1145
GlaI GCGC 4 cut(s) 222, 224, 226, 1145
GluI GCNGC 6 cut(s) 138, 170, 357, 366, 406, 513
GsaI CCCAGC 2 cut(s) 58, 568
GsuI CTGGAG 2 cut(s) 144, 705
HaeIII GGCC 2 cut(s) 137, 966
HapII CCGG 1 cut(s) 967
HgaI GACGC 1 cut(s) 811
HhaI GCGC 4 cut(s) 223, 225, 227, 1146
Hin1I GRCGYC 1 cut(s) 803
Hin6I GCGC 4 cut(s) 221, 223, 225, 1144
HinP1I GCGC 4 cut(s) 221, 223, 225, 1144
HincII GTYRAC 1 cut(s) 1412
HindII GTYRAC 1 cut(s) 1412
HindIII AAGCTT 1 cut(s) 678
HinfI GANTC 7 cut(s) 183, 469, 608, 841, 898, 1307, 1662
HpaII CCGG 1 cut(s) 967
HphI GGTGA 2 cut(s) 209, 1376
Hpy166II GTNNAC 5 cut(s) 655, 781, 815, 1279, 1412
Hpy188I TCNGA 5 cut(s) 466, 607, 643, 891, 1051
Hpy188III TCNNGA 6 cut(s) 187, 473, 902, 981, 1258, 1639
Hpy8I GTNNAC 5 cut(s) 655, 781, 815, 1279, 1412
HpyAV CCTTC 5 cut(s) 171, 288, 612, 1014, 1204
HpyCH4III ACNGT 1 cut(s) 26
HpyCH4IV ACGT 1 cut(s) 783
HpyCH4V TGCA 5 cut(s) 116, 350, 359, 522, 583
HpyF3I CTNAG 4 cut(s) 463, 642, 693, 764
HpySE526I ACGT 1 cut(s) 783
Hsp92I GRCGYC 1 cut(s) 803
HspAI GCGC 4 cut(s) 221, 223, 225, 1144
Kzo9I GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
LmnI GCTCC 4 cut(s) 166, 724, 1006, 1318
Lsp1109I GCAGC 4 cut(s) 343, 352, 392, 499
LweI GCATC 6 cut(s) 135, 151, 592, 645, 1005, 1569
MaeI CTAG 4 cut(s) 218, 441, 749, 1520
MaeII ACGT 1 cut(s) 783
MaeIII GTNAC 5 cut(s) 20, 669, 799, 1182, 1364
MalI GATC 7 cut(s) 599, 744, 888, 1227, 1445, 1480, 1643
MauBI CGCGCGCG 1 cut(s) 223
MbiI CCGCTC 1 cut(s) 1001
MboI GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
MboII GAAGA 5 cut(s) 186, 437, 1206, 1492, 1555
MfeI CAATTG 1 cut(s) 1482
MhlI GDGCHC 2 cut(s) 292, 385
MluCI AATT 5 cut(s) 907, 1104, 1417, 1482, 1567
MlyI GAGTC 3 cut(s) 192, 850, 1656
MmeI TCCRAC 3 cut(s) 465, 804, 1029
MroXI GAANNNNTTC 1 cut(s) 785
MseI TTAA 4 cut(s) 576, 1082, 1331, 1656
MslI CAYNNNNRTG 1 cut(s) 593
MspA1I CMGCKG 1 cut(s) 884
MspI CCGG 1 cut(s) 967
MspR9I CCNGG 4 cut(s) 123, 723, 968, 1404
MunI CAATTG 1 cut(s) 1482
Mva1269I GAATGC 2 cut(s) 118, 134
MvaI CCWGG 3 cut(s) 123, 723, 1404
NciI CCSGG 1 cut(s) 968
NdeII GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
NheI GCTAGC 1 cut(s) 217
NlaIV GGNNCC 3 cut(s) 136, 168, 489
NmeAIII GCCGAG 1 cut(s) 1644
NmuCI GTSAC 3 cut(s) 20, 799, 1364
NruI TCGCGA 1 cut(s) 188
NsbI TGCGCA 1 cut(s) 1145
NspI RCATGY 4 cut(s) 40, 536, 1190, 1325
NspV TTCGAA 1 cut(s) 1192
PaeI GCATGC 1 cut(s) 536
PaeR7I CTCGAG 1 cut(s) 709
PaqCI CACCTGC 3 cut(s) 185, 341, 1639
PauI GCGCGC 2 cut(s) 221, 223
PciI ACATGT 1 cut(s) 1186
PctI GAATGC 2 cut(s) 118, 134
PdmI GAANNNNTTC 1 cut(s) 785
PfeI GAWTC 4 cut(s) 469, 608, 898, 1307
PkrI GCNGC 6 cut(s) 139, 171, 358, 367, 407, 514
PleI GAGTC 3 cut(s) 191, 849, 1656
PpsI GAGTC 3 cut(s) 191, 849, 1656
PscI ACATGT 1 cut(s) 1186
PsiI TTATAA 2 cut(s) 684, 1028
Psp6I CCWGG 3 cut(s) 121, 721, 1402
PspFI CCCAGC 2 cut(s) 54, 564
PspGI CCWGG 3 cut(s) 121, 721, 1402
PspN4I GGNNCC 3 cut(s) 136, 168, 489
PspPI GGNCC 4 cut(s) 135, 996, 1260, 1544
PspXI VCTCGAGB 1 cut(s) 709
PstNI CAGNNNCTG 2 cut(s) 122, 356
PteI GCGCGC 2 cut(s) 221, 223
RruI TCGCGA 1 cut(s) 188
RsaI GTAC 3 cut(s) 769, 1097, 1218
RsaNI GTAC 3 cut(s) 768, 1096, 1217
RseI CAYNNNNRTG 1 cut(s) 593
SaqAI TTAA 4 cut(s) 576, 1082, 1331, 1656
SatI GCNGC 6 cut(s) 138, 170, 357, 366, 406, 513
Sau3AI GATC 7 cut(s) 597, 742, 886, 1225, 1443, 1478, 1641
Sau96I GGNCC 4 cut(s) 135, 996, 1260, 1544
SchI GAGTC 3 cut(s) 192, 850, 1656
ScrFI CCNGG 4 cut(s) 123, 723, 968, 1404
SduI GDGCHC 2 cut(s) 292, 385
SfaNI GCATC 6 cut(s) 135, 151, 592, 645, 1005, 1569
Sfr274I CTCGAG 1 cut(s) 709
SfuI TTCGAA 1 cut(s) 1192
SinI GGWCC 3 cut(s) 996, 1260, 1544
SlaI CTCGAG 1 cut(s) 709
SmiMI CAYNNNNRTG 1 cut(s) 593
SmlI CTYRAG 3 cut(s) 450, 709, 991
SmoI CTYRAG 3 cut(s) 450, 709, 991
SphI GCATGC 1 cut(s) 536
Sse9I AATT 5 cut(s) 907, 1104, 1417, 1482, 1567
SspMI CTAG 4 cut(s) 218, 441, 749, 1520
StyD4I CCNGG 4 cut(s) 121, 721, 966, 1402
StyI CCWWGG 2 cut(s) 613, 1610
TaaI ACNGT 1 cut(s) 26
TaiI ACGT 1 cut(s) 786
TaqI TCGA 6 cut(s) 98, 251, 710, 1192, 1376, 1446
TaqII GACCGA 1 cut(s) 1277
TasI AATT 5 cut(s) 907, 1104, 1417, 1482, 1567
TatI WGTACW 2 cut(s) 767, 1095
TauI GCSGC 2 cut(s) 140, 172
TfiI GAWTC 4 cut(s) 469, 608, 898, 1307
Tru1I TTAA 4 cut(s) 576, 1082, 1331, 1656
Tru9I TTAA 4 cut(s) 576, 1082, 1331, 1656
TseFI GTSAC 3 cut(s) 20, 799, 1364
TseI GCWGC 4 cut(s) 356, 365, 405, 512
Tsp45I GTSAC 3 cut(s) 20, 799, 1364
TspDTI ATGAA 3 cut(s) 943, 1124, 1542
TspGWI ACGGA 5 cut(s) 404, 810, 1077, 1118, 1448
VpaK11BI GGWCC 3 cut(s) 996, 1260, 1544
XapI RAATTY 2 cut(s) 1104, 1417
XceI RCATGY 4 cut(s) 40, 536, 1190, 1325
XcmI CCANNNNNNNNNTGG 1 cut(s) 1635
XhoI CTCGAG 1 cut(s) 709
XmiI GTMKAC 2 cut(s) 654, 814
XmnI GAANNNNTTC 1 cut(s) 785
XspI CTAG 4 cut(s) 218, 441, 749, 1520
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.