Rroxscaffold_1G00048290

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000064
Physical Location & Seq
Forward (+)
68264164 .. 68276325
12162 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00048290.1

Sequence Viewer

Length: 1380 bp
ATGGATCCAAGACCTCGGGGTACGTTTTCTCGGGGCAAAGTTTTCGTGCAGCGAGGTCAAGATTGGGCATCTTTGCCTAAGGACCTTCTTTATTCAGTTCTTGAGAGATTAGTGTTACCAGGAGACTACTTGCGATTCAGCATTGTTTGTACGTCATGGTATTCTGCAGCAAAGGATAATAAAGTTATTCGTGCAAGGATGACAGCTCCAATGCTCTTGATTTATACAGGCAAAAAAGATTATTGGAAATTATACGACATCATGGTTAACAGGTTCCTGGATTTGCAAGTGAGGGTTCCCAATAAGCGGCTTTGTGGGTCTTCAAAAGATTGGTTAATATTTGTGGATAAAAATGTCGCGGATAAGAATTTTGGAGTGACCCTAATTAATCCATTCTTTAGGGTCAGAGGAAGAAGAGAGAAAGAAAACTCCATCATTCGCCTTCCTCCACTAACGCCTCCAGGTTGGGAAAAGTGGTTCAGACGATGCGAGTATTATGTCTACAAGGCTACAATGTCAGGTGACCCAATACAAGATCCAAACAATTGCATAGTTTTTGTTATATATATGGAACAGTCTCTCTTGGCATTTATTAAACCGGGTAAAGACACAGCATGGACGTATGTTGATGCAAGTGTAGATAGTACTGTTCGAGGGTGCCGCTTGGTTGAAGAAGTTACGTGCCTTGAAGGTAAATTTTATGCTGTTAACCATTGGAGTGAACTCATATCTTTTGCTGTTACTGCTGAGTCATACTCAAATGTAAAATTGGTTGTGCCGGCTGGATTCAAACCAAATTGCATAATCAAGAGATATCTTGTGGAAACAAAAGATAAAGAACTGTTAATGGTTCAAAGATACATAGAGTTTGACGATGAAAAATACATACGCGTGACAAAGAAATTTAGAGTTTTCAAATGGAATTTCAATTTGTGCAAGTGGATTGAAGAAACCAGCTTAGGTGATTTTGCGCTCTTTTTGGGAGATAACACTTCTGAAGCGATGATGCCTTCAAAATTTTCAAGTTGTCGACCAAATCATATATACTTCAACCATGATCGTGATTTGTTTAGCCGTTACGGACCTCATGATTATGGTGTTTATAACATCAAAGAGGAAAGTTTTTCACAGCCTTACACCAAACAGGCTAAAAACCTGGTGAAGAAGAGCAATCGACTACCAATTTGGGTTGTTCCAAAAGTTGCCCATTCTGCAGCCAGGTCGTTTCACCTCTACGCTCAAACCAACCCAGTGACTCAGCTGAGACGTGCGGCTCATGCCACCATCAAATGTTGCCCTTCTCCGTCAGCTTCTTTAAAGCTTAATGTTGATGGATCTGGCCTCCTCCAGCTTCTATTGTTTCTCCAGCTTTCCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

459

Amino Acids

53.23

Weight (kDa)

9.45

Isoelectric Point (pI)

36.74

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 22 - 61 1.8e-06 F-box-like
Beta-prop_KIB1-4 PF03478 97 - 369 1.9e-43 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1104
AccB1I GGYRCC 1 cut(s) 657
AccI GTMKAC 2 cut(s) 501, 1030
AccII CGCG 2 cut(s) 359, 891
AciI CCGC 4 cut(s) 307, 359, 661, 1271
AclWI GGATC 3 cut(s) 12, 530, 1342
AcsI RAATTY 5 cut(s) 367, 695, 902, 922, 1016
AcuI CTGAAG 1 cut(s) 1017
AfaI GTAC 3 cut(s) 22, 151, 646
AfiI CCNNNNNNNGG 1 cut(s) 306
AflIII ACRYGT 1 cut(s) 889
AjiI CACGTC 1 cut(s) 1268
AjnI CCWGG 5 cut(s) 118, 276, 460, 1155, 1217
AloI GAACNNNNNNTCC 2 cut(s) 461, 493
AluBI AGCT 7 cut(s) 206, 957, 1261, 1310, 1321, 1351, 1369
AluI AGCT 7 cut(s) 206, 957, 1261, 1310, 1321, 1351, 1369
Alw26I GTCTC 3 cut(s) 117, 582, 1258
AlwI GGATC 3 cut(s) 12, 530, 1342
Ama87I CYCGRG 2 cut(s) 15, 30
AoxI GGCC 1 cut(s) 1339
ApeKI GCWGC 3 cut(s) 49, 167, 1214
ApoI RAATTY 5 cut(s) 367, 695, 902, 922, 1016
ArsI GACNNNNNNTTYG 2 cut(s) 1167, 1199
AseI ATTAAT 1 cut(s) 387
AspLEI GCGC 1 cut(s) 973
AspS9I GGNCC 2 cut(s) 82, 1082
AsuC2I CCSGG 1 cut(s) 600
AsuHPI GGTGA 4 cut(s) 533, 974, 1171, 1220
AvaI CYCGRG 2 cut(s) 15, 30
AvaII GGWCC 2 cut(s) 82, 1082
AxyI CCTNAGG 1 cut(s) 78
BamHI GGATCC 1 cut(s) 4
BanI GGYRCC 1 cut(s) 657
BbsI GAAGAC 1 cut(s) 312
BbvI GCAGC 3 cut(s) 61, 179, 1226
BccI CCATC 3 cut(s) 440, 1292, 1325
BceAI ACGGC 1 cut(s) 1059
BcgI CGANNNNNNTGC 4 cut(s) 25, 59, 1203, 1237
BciT130I CCWGG 5 cut(s) 120, 278, 462, 1157, 1219
BcnI CCSGG 1 cut(s) 600
BcoDI GTCTC 3 cut(s) 117, 582, 1258
BfmI CTRYAG 2 cut(s) 165, 1212
BisI GCNGC 6 cut(s) 50, 168, 308, 661, 1215, 1272
BlsI GCNGC 6 cut(s) 51, 169, 309, 662, 1216, 1273
BmcAI AGTACT 1 cut(s) 646
Bme1390I CCNGG 6 cut(s) 120, 278, 462, 600, 1157, 1219
Bme18I GGWCC 2 cut(s) 82, 1082
BmeT110I CYCGRG 2 cut(s) 15, 30
BmgBI CACGTC 1 cut(s) 1268
BmgT120I GGNCC 2 cut(s) 82, 1082
BmiI GGNNCC 4 cut(s) 6, 275, 297, 659
BmrFI CCNGG 6 cut(s) 120, 278, 462, 600, 1157, 1219
BmrI ACTGGG 2 cut(s) 1244, 1369
BmsI GCATC 4 cut(s) 77, 476, 619, 996
BmuI ACTGGG 2 cut(s) 1244, 1369
BpiI GAAGAC 1 cut(s) 312
BplI GAGNNNNNCTC 2 cut(s) 740, 772
BpmI CTGGAG 3 cut(s) 444, 1331, 1349
Bpu10I CCTNAGC 1 cut(s) 958
BpuEI CTTGAG 1 cut(s) 122
BpuMI CCSGG 1 cut(s) 600
BsaAI YACGTR 1 cut(s) 681
BsaJI CCNNGG 1 cut(s) 14
Bsc4I CCNNNNNNNGG 1 cut(s) 306
Bse118I RCCGGY 1 cut(s) 778
Bse1I ACTGG 2 cut(s) 1250, 1375
Bse21I CCTNAGG 1 cut(s) 78
BseBI CCWGG 5 cut(s) 120, 278, 462, 1157, 1219
BseDI CCNNGG 1 cut(s) 14
BseGI GGATG 1 cut(s) 204
BseLI CCNNNNNNNGG 1 cut(s) 306
BseMII CTCAG 3 cut(s) 738, 1253, 1271
BseNI ACTGG 2 cut(s) 1250, 1375
BseRI GAGGAG 1 cut(s) 1334
BseXI GCAGC 3 cut(s) 61, 179, 1226
BsgI GTGCAG 1 cut(s) 68
Bsh1236I CGCG 2 cut(s) 359, 891
BshFI GGCC 1 cut(s) 1341
BshNI GGYRCC 1 cut(s) 657
BsiHKCI CYCGRG 2 cut(s) 15, 30
BsiSI CCGG 2 cut(s) 599, 779
BslI CCNNNNNNNGG 1 cut(s) 306
BsmAI GTCTC 3 cut(s) 117, 582, 1258
BsmBI CGTCTC 1 cut(s) 1258
BsnI GGCC 1 cut(s) 1341
BsoBI CYCGRG 2 cut(s) 15, 30
Bsp143I GATC 4 cut(s) 4, 535, 1057, 1334
BspACI CCGC 4 cut(s) 307, 359, 661, 1271
BspANI GGCC 1 cut(s) 1341
BspCNI CTCAG 3 cut(s) 739, 1254, 1270
BspFNI CGCG 2 cut(s) 359, 891
BspHI TCATGA 1 cut(s) 1087
BspLI GGNNCC 4 cut(s) 6, 275, 297, 659
BspMAI CTGCAG 2 cut(s) 169, 1216
BspPI GGATC 3 cut(s) 12, 530, 1342
BspQI GCTCTTC 1 cut(s) 1160
BspT107I GGYRCC 1 cut(s) 657
BsrFI RCCGGY 1 cut(s) 778
BsrI ACTGG 2 cut(s) 1250, 1375
BssAI RCCGGY 1 cut(s) 778
BssECI CCNNGG 1 cut(s) 14
BssMI GATC 4 cut(s) 4, 535, 1057, 1334
Bst2UI CCWGG 5 cut(s) 120, 278, 462, 1157, 1219
Bst4CI ACNGT 3 cut(s) 576, 649, 843
Bst6I CTCTTC 2 cut(s) 409, 1160
BstBAI YACGTR 1 cut(s) 681
BstC8I GCNNGC 1 cut(s) 780
BstDEI CTNAG 5 cut(s) 78, 747, 958, 1257, 1262
BstEII GGTNACC 1 cut(s) 521
BstF5I GGATG 1 cut(s) 204
BstFNI CGCG 2 cut(s) 359, 891
BstHHI GCGC 1 cut(s) 973
BstKTI GATC 4 cut(s) 7, 538, 1060, 1337
BstMAI GTCTC 3 cut(s) 117, 582, 1258
BstMBI GATC 4 cut(s) 4, 535, 1057, 1334
BstMWI GCNNNNNNNGC 3 cut(s) 743, 1211, 1277
BstNI CCWGG 5 cut(s) 120, 278, 462, 1157, 1219
BstPI GGTNACC 1 cut(s) 521
BstSCI CCNGG 6 cut(s) 118, 276, 460, 598, 1155, 1217
BstSFI CTRYAG 2 cut(s) 165, 1212
BstUI CGCG 2 cut(s) 359, 891
BstV1I GCAGC 3 cut(s) 61, 179, 1226
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 3 cut(s) 4, 535, 1334
BstYI RGATCY 3 cut(s) 4, 535, 1334
Bsu36I CCTNAGG 1 cut(s) 78
BsuRI GGCC 1 cut(s) 1341
BtgZI GCGATG 1 cut(s) 1016
BtrI CACGTC 1 cut(s) 1268
BtsCI GGATG 1 cut(s) 204
BtsIMutI CAGTG 1 cut(s) 1257
Cac8I GCNNGC 1 cut(s) 780
CciI TCATGA 1 cut(s) 1087
CfoI GCGC 1 cut(s) 973
Cfr10I RCCGGY 1 cut(s) 778
Cfr13I GGNCC 2 cut(s) 82, 1082
CsiI ACCWGGT 1 cut(s) 1155
Csp6I GTAC 3 cut(s) 21, 150, 645
CviAII CATG 6 cut(s) 156, 262, 615, 1055, 1088, 1277
CviQI GTAC 3 cut(s) 21, 150, 645
DdeI CTNAG 5 cut(s) 78, 747, 958, 1257, 1262
DpnI GATC 4 cut(s) 6, 537, 1059, 1336
DpnII GATC 4 cut(s) 4, 535, 1057, 1334
DraI TTTAAA 1 cut(s) 1317
Eam1104I CTCTTC 2 cut(s) 409, 1160
EarI CTCTTC 2 cut(s) 409, 1160
Eco32I GATATC 1 cut(s) 815
Eco47I GGWCC 2 cut(s) 82, 1082
Eco57I CTGAAG 1 cut(s) 1017
Eco81I CCTNAGG 1 cut(s) 78
Eco88I CYCGRG 2 cut(s) 15, 30
Eco91I GGTNACC 1 cut(s) 521
EcoO109I RGGNCCY 1 cut(s) 82
EcoO65I GGTNACC 1 cut(s) 521
EcoRII CCWGG 5 cut(s) 118, 276, 460, 1155, 1217
EcoRV GATATC 1 cut(s) 815
Esp3I CGTCTC 1 cut(s) 1258
FaeI CATG 6 cut(s) 159, 265, 618, 1058, 1091, 1280
FatI CATG 6 cut(s) 155, 261, 614, 1054, 1087, 1276
FblI GTMKAC 2 cut(s) 501, 1030
Fnu4HI GCNGC 6 cut(s) 50, 168, 308, 661, 1215, 1272
FokI GGATG 1 cut(s) 211
Fsp4HI GCNGC 6 cut(s) 50, 168, 308, 661, 1215, 1272
GlaI GCGC 1 cut(s) 972
GluI GCNGC 6 cut(s) 50, 168, 308, 661, 1215, 1272
GsuI CTGGAG 3 cut(s) 444, 1331, 1349
HaeIII GGCC 1 cut(s) 1341
HapII CCGG 2 cut(s) 599, 779
HhaI GCGC 1 cut(s) 973
Hin1II CATG 6 cut(s) 159, 265, 618, 1058, 1091, 1280
Hin6I GCGC 1 cut(s) 971
HinP1I GCGC 1 cut(s) 971
HincII GTYRAC 3 cut(s) 268, 709, 1031
HindII GTYRAC 3 cut(s) 268, 709, 1031
HindIII AAGCTT 1 cut(s) 1319
HinfI GANTC 4 cut(s) 135, 749, 786, 1255
HpaI GTTAAC 2 cut(s) 268, 709
HpaII CCGG 2 cut(s) 599, 779
HphI GGTGA 4 cut(s) 533, 974, 1171, 1220
Hpy166II GTNNAC 5 cut(s) 268, 502, 709, 722, 1031
Hpy188I TCNGA 3 cut(s) 407, 482, 997
Hpy188III TCNNGA 6 cut(s) 59, 101, 217, 808, 1061, 1088
Hpy8I GTNNAC 5 cut(s) 268, 502, 709, 722, 1031
HpyAV CCTTC 5 cut(s) 95, 452, 683, 1020, 1308
HpyCH4III ACNGT 3 cut(s) 576, 649, 843
HpyCH4IV ACGT 5 cut(s) 23, 152, 620, 680, 1267
HpyCH4V TGCA 9 cut(s) 49, 167, 194, 286, 549, 632, 801, 936, 1214
HpyF10VI GCNNNNNNNGC 3 cut(s) 743, 1211, 1277
HpyF3I CTNAG 5 cut(s) 78, 747, 958, 1257, 1262
HpySE526I ACGT 5 cut(s) 23, 152, 620, 680, 1267
Hsp92II CATG 6 cut(s) 159, 265, 618, 1058, 1091, 1280
HspAI GCGC 1 cut(s) 971
KroI GCCGGC 1 cut(s) 778
KroNI GCCGGC 1 cut(s) 780
KspAI GTTAAC 2 cut(s) 268, 709
Kzo9I GATC 4 cut(s) 4, 535, 1057, 1334
LguI GCTCTTC 1 cut(s) 1160
LmnI GCTCC 1 cut(s) 211
Lsp1109I GCAGC 3 cut(s) 61, 179, 1226
LweI GCATC 4 cut(s) 77, 476, 619, 996
MabI ACCWGGT 1 cut(s) 1155
MaeII ACGT 5 cut(s) 23, 152, 620, 680, 1267
MaeIII GTNAC 8 cut(s) 114, 376, 521, 676, 739, 892, 1076, 1252
MalI GATC 4 cut(s) 6, 537, 1059, 1336
MboI GATC 4 cut(s) 4, 535, 1057, 1334
MboII GAAGA 7 cut(s) 312, 423, 426, 683, 959, 1174, 1177
MfeI CAATTG 1 cut(s) 544
MflI RGATCY 3 cut(s) 4, 535, 1334
MluI ACGCGT 1 cut(s) 889
MlyI GAGTC 2 cut(s) 758, 1249
MroNI GCCGGC 1 cut(s) 778
MseI TTAA 8 cut(s) 267, 335, 387, 594, 708, 845, 1316, 1323
MslI CAYNNNNRTG 4 cut(s) 717, 890, 1059, 1092
MspA1I CMGCKG 1 cut(s) 1261
MspI CCGG 2 cut(s) 599, 779
MspR9I CCNGG 6 cut(s) 120, 278, 462, 600, 1157, 1219
MunI CAATTG 1 cut(s) 544
MvaI CCWGG 5 cut(s) 120, 278, 462, 1157, 1219
MvnI CGCG 2 cut(s) 359, 891
MwoI GCNNNNNNNGC 3 cut(s) 743, 1211, 1277
NaeI GCCGGC 1 cut(s) 780
NciI CCSGG 1 cut(s) 600
NdeII GATC 4 cut(s) 4, 535, 1057, 1334
NgoMIV GCCGGC 1 cut(s) 778
NlaIII CATG 6 cut(s) 159, 265, 618, 1058, 1091, 1280
NlaIV GGNNCC 4 cut(s) 6, 275, 297, 659
NmuCI GTSAC 4 cut(s) 376, 521, 892, 1252
PagI TCATGA 1 cut(s) 1087
PciSI GCTCTTC 1 cut(s) 1160
PdiI GCCGGC 1 cut(s) 780
PfeI GAWTC 2 cut(s) 135, 786
PfoI TCCNGGA 1 cut(s) 276
PkrI GCNGC 6 cut(s) 51, 169, 309, 662, 1216, 1273
PleI GAGTC 2 cut(s) 757, 1249
PpsI GAGTC 2 cut(s) 757, 1249
Ppu21I YACGTR 1 cut(s) 681
PpuMI RGGWCCY 1 cut(s) 82
PshBI ATTAAT 1 cut(s) 387
PsiI TTATAA 1 cut(s) 1104
Psp5II RGGWCCY 1 cut(s) 82
Psp6I CCWGG 5 cut(s) 118, 276, 460, 1155, 1217
PspEI GGTNACC 1 cut(s) 521
PspGI CCWGG 5 cut(s) 118, 276, 460, 1155, 1217
PspN4I GGNNCC 4 cut(s) 6, 275, 297, 659
PspPI GGNCC 2 cut(s) 82, 1082
PspPPI RGGWCCY 1 cut(s) 82
PstI CTGCAG 2 cut(s) 169, 1216
PsuI RGATCY 3 cut(s) 4, 535, 1334
PvuII CAGCTG 1 cut(s) 1261
RsaI GTAC 3 cut(s) 22, 151, 646
RsaNI GTAC 3 cut(s) 21, 150, 645
RseI CAYNNNNRTG 4 cut(s) 717, 890, 1059, 1092
SalI GTCGAC 1 cut(s) 1029
SapI GCTCTTC 1 cut(s) 1160
SaqAI TTAA 8 cut(s) 267, 335, 387, 594, 708, 845, 1316, 1323
SatI GCNGC 6 cut(s) 50, 168, 308, 661, 1215, 1272
Sau3AI GATC 4 cut(s) 4, 535, 1057, 1334
Sau96I GGNCC 2 cut(s) 82, 1082
ScaI AGTACT 1 cut(s) 646
SchI GAGTC 2 cut(s) 758, 1249
ScrFI CCNGG 6 cut(s) 120, 278, 462, 600, 1157, 1219
SexAI ACCWGGT 1 cut(s) 1155
SfaNI GCATC 4 cut(s) 77, 476, 619, 996
SfcI CTRYAG 2 cut(s) 165, 1212
SinI GGWCC 2 cut(s) 82, 1082
SmiMI CAYNNNNRTG 4 cut(s) 717, 890, 1059, 1092
SmlI CTYRAG 1 cut(s) 101
SmoI CTYRAG 1 cut(s) 101
SsiI CCGC 4 cut(s) 307, 359, 661, 1271
SspI AATATT 1 cut(s) 339
StyD4I CCNGG 6 cut(s) 118, 276, 460, 598, 1155, 1217
TaaI ACNGT 3 cut(s) 576, 649, 843
TaiI ACGT 5 cut(s) 26, 155, 623, 683, 1270
TaqI TCGA 3 cut(s) 652, 1030, 1174
TatI WGTACW 1 cut(s) 644
TauI GCSGC 3 cut(s) 310, 663, 1274
TfiI GAWTC 2 cut(s) 135, 786
Tru1I TTAA 8 cut(s) 267, 335, 387, 594, 708, 845, 1316, 1323
Tru9I TTAA 8 cut(s) 267, 335, 387, 594, 708, 845, 1316, 1323
TscAI CASTG 1 cut(s) 1257
TseFI GTSAC 4 cut(s) 376, 521, 892, 1252
TseI GCWGC 3 cut(s) 49, 167, 1214
Tsp45I GTSAC 4 cut(s) 376, 521, 892, 1252
TspDTI ATGAA 1 cut(s) 891
TspGWI ACGGA 2 cut(s) 1095, 1293
TspRI CASTG 1 cut(s) 1257
VpaK11BI GGWCC 2 cut(s) 82, 1082
VspI ATTAAT 1 cut(s) 387
XapI RAATTY 5 cut(s) 367, 695, 902, 922, 1016
XmiI GTMKAC 2 cut(s) 501, 1030
ZrmI AGTACT 1 cut(s) 646
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.