Rmu_sc0010556.1_g000018

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0010556.1
OG0000064
Physical Location & Seq
Reverse (-)
57705 .. 58925
1221 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0010556.1_g000018.1.cds

Sequence Viewer

Length: 1221 bp
atgatcaagtgtcgtggagtgactagttcagattacccagaatgggcaaggagcctcactgtggatgttgcctttgttattcttgataagttattggaacccatcgaccatgttcattttgctgccatttgcaaactttggcattcttttgcagaacactacaatcgtacaacacgtcgatggcctaagctacttcctcccatgctcgtcctgcccggcgatcaagacctaatttatagcctatctgaaggaaaagtctaccacaagattagcctagcaatgcctcggtttaacgttcgcagatactatgcctgtggcaacggttggctcgcttcaatgcatggtccaaattctacgatacatttcctgaaccctttcacaagagcgacccatgtcttgagatgcaggggatggagattcggcccgagcaccgagccaaagcaggcccgtatgagccccgagctggagcaggccccgaagcttatcttgtttggggatccttctgttaatgggggcaacagttttatggttgtagcattttacaccactgattccactcttggtttcattagaggagggcaatcgttttgtagttccatagaaacaatggaacaatatgcgattactgatgctattttctacaaaggtcaggtatacgcagttgacaagaatcttggaagaatcatgtcgtttgatgttaaaacctgtacttctggtgattcactaaaggcaaagatactcaatactacttatatgcgctcaagttctcaatcatatcttgtggaatcaactaaaggagagcttttgcacgttcgaagatttttgaaagtacagagagaatgggatcagctgaccatgcctgtgacattcactttcaaggtttacaagatggtatttgatgataatggatatgttgtgcagcaggttgagttaaaaacccttggagatgagactctgtttgttggtgacagtcagtcaatgtctatttcggcttcaaggttctcttggtgccaaccaaactccatatattacacaagtgattcgataactgtggaagatgattatcgaaattttaatagttgttgtcaatgcgatatggggattttcaatttagaggagggaaccactactcctctacaatgttaccctcagcattcttcggaagagtacagattaaaacctgcaacttggattgtgccaccaattaatggtctctgctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

406

Amino Acids

46.29

Weight (kDa)

7.53

Isoelectric Point (pI)

52.49

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 913, 1189
AccB1I GGYRCC 1 cut(s) 1008
AccB7I CCANNNNNTGG 1 cut(s) 1208
AccI GTMKAC 2 cut(s) 258, 654
AclI AACGTT 1 cut(s) 294
AclWI GGATC 3 cut(s) 491, 504, 852
AcsI RAATTY 2 cut(s) 349, 1069
AcuI CTGAAG 1 cut(s) 267
AfaI GTAC 4 cut(s) 169, 709, 831, 1169
AfiI CCNNNNNNNGG 4 cut(s) 43, 61, 463, 1208
AflIII ACRYGT 1 cut(s) 173
AgsI TTSAA 5 cut(s) 336, 826, 877, 996, 1108
AhdI GACNNNNNGTC 1 cut(s) 973
AhlI ACTAGT 1 cut(s) 23
AjiI CACGTC 1 cut(s) 176
AloI GAACNNNNNNTCC 2 cut(s) 1114, 1146
AluBI AGCT 5 cut(s) 190, 463, 481, 802, 850
AluI AGCT 5 cut(s) 190, 463, 481, 802, 850
Alw21I GWGCWC 1 cut(s) 431
Alw26I GTCTC 2 cut(s) 944, 1217
AlwI GGATC 3 cut(s) 491, 504, 852
Ama87I CYCGRG 2 cut(s) 424, 458
AoxI GGCC 4 cut(s) 182, 421, 444, 471
ApeKI GCWGC 2 cut(s) 122, 919
ApoI RAATTY 2 cut(s) 349, 1069
AseI ATTAAT 1 cut(s) 1206
Asp700I GAANNNNTTC 1 cut(s) 374
AspLEI GCGC 1 cut(s) 759
AspS9I GGNCC 4 cut(s) 344, 422, 445, 472
AsuC2I CCSGG 1 cut(s) 216
AsuHPI GGTGA 2 cut(s) 728, 977
AsuII TTCGAA 1 cut(s) 814
AvaI CYCGRG 2 cut(s) 424, 458
AvaII GGWCC 1 cut(s) 344
BamHI GGATCC 1 cut(s) 496
BanI GGYRCC 1 cut(s) 1008
BanII GRGCYC 1 cut(s) 458
Bbv12I GWGCWC 1 cut(s) 431
BbvCI CCTCAGC 1 cut(s) 1149
BbvI GCAGC 2 cut(s) 109, 931
BccI CCATC 4 cut(s) 110, 174, 405, 883
BclI TGATCA 1 cut(s) 3
BcnI CCSGG 1 cut(s) 216
BcoDI GTCTC 2 cut(s) 944, 1217
BcuI ACTAGT 1 cut(s) 23
BfaI CTAG 3 cut(s) 24, 275, 1219
BfuAI ACCTGC 2 cut(s) 913, 1189
BisI GCNGC 2 cut(s) 123, 920
BlsI GCNGC 2 cut(s) 124, 921
Bme1390I CCNGG 1 cut(s) 216
Bme18I GGWCC 1 cut(s) 344
BmeRI GACNNNNNGTC 1 cut(s) 973
BmeT110I CYCGRG 2 cut(s) 424, 458
BmgBI CACGTC 1 cut(s) 176
BmgT120I GGNCC 4 cut(s) 344, 422, 445, 472
BmiI GGNNCC 6 cut(s) 53, 99, 474, 498, 1010, 1123
BmrFI CCNGG 1 cut(s) 216
BmsI GCATC 2 cut(s) 392, 619
BoxI GACNNNNGTC 1 cut(s) 392
BpmI CTGGAG 1 cut(s) 485
Bpu10I CCTNAGC 2 cut(s) 186, 1149
Bpu14I TTCGAA 1 cut(s) 814
BpuEI CTTGAG 2 cut(s) 418, 745
BpuMI CCSGG 1 cut(s) 216
BsaBI GATNNNNATC 1 cut(s) 1062
BsaI GGTCTC 1 cut(s) 1217
BsaJI CCNNGG 2 cut(s) 284, 940
BsaXI ACNNNNNCTCC 2 cut(s) 1114, 1144
Bsc4I CCNNNNNNNGG 4 cut(s) 43, 61, 463, 1208
Bse3DI GCAATG 1 cut(s) 285
Bse8I GATNNNNATC 1 cut(s) 1062
BseDI CCNNGG 2 cut(s) 284, 940
BseGI GGATG 2 cut(s) 70, 416
BseJI GATNNNNATC 1 cut(s) 1062
BseLI CCNNNNNNNGG 4 cut(s) 43, 61, 463, 1208
BseMI GCAATG 1 cut(s) 285
BseMII CTCAG 1 cut(s) 1163
BseRI GAGGAG 3 cut(s) 588, 1122, 1130
BseXI GCAGC 2 cut(s) 109, 931
BsgI GTGCAG 1 cut(s) 938
BshFI GGCC 4 cut(s) 184, 423, 446, 473
BshNI GGYRCC 1 cut(s) 1008
BsiHKAI GWGCWC 1 cut(s) 431
BsiHKCI CYCGRG 2 cut(s) 424, 458
BsiSI CCGG 1 cut(s) 216
BslI CCNNNNNNNGG 4 cut(s) 43, 61, 463, 1208
BsmAI GTCTC 2 cut(s) 944, 1217
BsmI GAATGC 2 cut(s) 142, 1153
BsnI GGCC 4 cut(s) 184, 423, 446, 473
Bso31I GGTCTC 1 cut(s) 1217
BsoBI CYCGRG 2 cut(s) 424, 458
Bsp119I TTCGAA 1 cut(s) 814
Bsp1286I GDGCHC 2 cut(s) 431, 458
Bsp143I GATC 4 cut(s) 3, 220, 496, 844
BspANI GGCC 4 cut(s) 184, 423, 446, 473
BspCNI CTCAG 1 cut(s) 1162
BspLI GGNNCC 6 cut(s) 53, 99, 474, 498, 1010, 1123
BspMI ACCTGC 2 cut(s) 913, 1189
BspPI GGATC 3 cut(s) 491, 504, 852
BspT104I TTCGAA 1 cut(s) 814
BspT107I GGYRCC 1 cut(s) 1008
BspTNI GGTCTC 1 cut(s) 1217
BsrDI GCAATG 1 cut(s) 285
BssECI CCNNGG 2 cut(s) 284, 940
BssMI GATC 4 cut(s) 3, 220, 496, 844
BssNAI GTATAC 1 cut(s) 655
BssT1I CCWWGG 1 cut(s) 940
Bst1107I GTATAC 1 cut(s) 655
Bst4CI ACNGT 5 cut(s) 61, 323, 521, 971, 1051
Bst6I CTCTTC 1 cut(s) 1158
BstBI TTCGAA 1 cut(s) 814
BstC8I GCNNGC 3 cut(s) 330, 444, 471
BstDEI CTNAG 2 cut(s) 186, 1149
BstF5I GGATG 2 cut(s) 70, 416
BstHHI GCGC 1 cut(s) 759
BstKTI GATC 4 cut(s) 6, 223, 499, 847
BstMAI GTCTC 2 cut(s) 944, 1217
BstMBI GATC 4 cut(s) 3, 220, 496, 844
BstMWI GCNNNNNNNGC 2 cut(s) 211, 856
BstPAI GACNNNNGTC 1 cut(s) 392
BstSCI CCNGG 1 cut(s) 214
BstV1I GCAGC 2 cut(s) 109, 931
BstX2I RGATCY 1 cut(s) 496
BstYI RGATCY 1 cut(s) 496
BstZ17I GTATAC 1 cut(s) 655
BsuRI GGCC 4 cut(s) 184, 423, 446, 473
BtrI CACGTC 1 cut(s) 176
BtsCI GGATG 2 cut(s) 70, 416
BtsIMutI CAGTG 2 cut(s) 57, 546
BveI ACCTGC 2 cut(s) 913, 1189
Cac8I GCNNGC 3 cut(s) 330, 444, 471
CfoI GCGC 1 cut(s) 759
Cfr13I GGNCC 4 cut(s) 344, 422, 445, 472
Csp6I GTAC 4 cut(s) 168, 708, 830, 1168
CspCI CAANNNNNGTGG 1 cut(s) 30
CviAII CATG 6 cut(s) 110, 202, 341, 392, 685, 856
CviQI GTAC 4 cut(s) 168, 708, 830, 1168
DdeI CTNAG 2 cut(s) 186, 1149
DpnI GATC 4 cut(s) 5, 222, 498, 846
DpnII GATC 4 cut(s) 3, 220, 496, 844
DriI GACNNNNNGTC 1 cut(s) 973
Eam1104I CTCTTC 1 cut(s) 1158
Eam1105I GACNNNNNGTC 1 cut(s) 973
EarI CTCTTC 1 cut(s) 1158
Eco130I CCWWGG 1 cut(s) 940
Eco24I GRGCYC 1 cut(s) 458
Eco31I GGTCTC 1 cut(s) 1217
Eco47I GGWCC 1 cut(s) 344
Eco57I CTGAAG 1 cut(s) 267
Eco88I CYCGRG 2 cut(s) 424, 458
EcoO109I RGGNCCY 1 cut(s) 472
EcoT14I CCWWGG 1 cut(s) 940
EcoT22I ATGCAT 1 cut(s) 342
EcoT38I GRGCYC 1 cut(s) 458
ErhI CCWWGG 1 cut(s) 940
FaeI CATG 6 cut(s) 113, 205, 344, 395, 688, 859
FalI AAGNNNNNCTT 6 cut(s) 470, 502, 786, 818, 988, 1020
FatI CATG 6 cut(s) 109, 201, 340, 391, 684, 855
FbaI TGATCA 1 cut(s) 3
FblI GTMKAC 2 cut(s) 258, 654
Fnu4HI GCNGC 2 cut(s) 123, 920
FokI GGATG 2 cut(s) 77, 423
FriOI GRGCYC 1 cut(s) 458
Fsp4HI GCNGC 2 cut(s) 123, 920
FspBI CTAG 3 cut(s) 24, 275, 1219
GlaI GCGC 1 cut(s) 758
GluI GCNGC 2 cut(s) 123, 920
GsuI CTGGAG 1 cut(s) 485
HaeIII GGCC 4 cut(s) 184, 423, 446, 473
HapII CCGG 1 cut(s) 216
HhaI GCGC 1 cut(s) 759
Hin1II CATG 6 cut(s) 113, 205, 344, 395, 688, 859
Hin6I GCGC 1 cut(s) 757
HinP1I GCGC 1 cut(s) 757
HincII GTYRAC 1 cut(s) 664
HindII GTYRAC 1 cut(s) 664
HindIII AAGCTT 1 cut(s) 479
HinfI GANTC 8 cut(s) 417, 551, 670, 681, 719, 785, 952, 1040
HpaII CCGG 1 cut(s) 216
HphI GGTGA 2 cut(s) 728, 977
Hpy166II GTNNAC 4 cut(s) 259, 655, 664, 883
Hpy188I TCNGA 3 cut(s) 31, 247, 1162
Hpy188III TCNNGA 4 cut(s) 83, 224, 367, 397
Hpy8I GTNNAC 4 cut(s) 259, 655, 664, 883
Hpy99I CGWCG 1 cut(s) 180
HpyAV CCTTC 2 cut(s) 242, 510
HpyCH4III ACNGT 5 cut(s) 61, 323, 521, 971, 1051
HpyCH4IV ACGT 3 cut(s) 175, 294, 810
HpyCH4V TGCA 7 cut(s) 132, 152, 340, 405, 808, 919, 1184
HpyF10VI GCNNNNNNNGC 2 cut(s) 211, 856
HpyF3I CTNAG 2 cut(s) 186, 1149
HpySE526I ACGT 3 cut(s) 175, 294, 810
Hsp92II CATG 6 cut(s) 113, 205, 344, 395, 688, 859
HspAI GCGC 1 cut(s) 757
Ksp22I TGATCA 1 cut(s) 3
Kzo9I GATC 4 cut(s) 3, 220, 496, 844
LmnI GCTCC 2 cut(s) 51, 466
Lsp1109I GCAGC 2 cut(s) 109, 931
LweI GCATC 2 cut(s) 392, 619
MaeI CTAG 3 cut(s) 24, 275, 1219
MaeII ACGT 3 cut(s) 175, 294, 810
MaeIII GTNAC 4 cut(s) 19, 862, 965, 1142
MalI GATC 4 cut(s) 5, 222, 498, 846
MboI GATC 4 cut(s) 3, 220, 496, 844
MboII GAAGA 5 cut(s) 690, 828, 1067, 1149, 1175
MflI RGATCY 1 cut(s) 496
MhlI GDGCHC 2 cut(s) 431, 458
MluCI AATT 5 cut(s) 231, 349, 1069, 1108, 1203
MlyI GAGTC 1 cut(s) 946
MnlI CCTC 9 cut(s) 65, 207, 294, 566, 569, 1108, 1111, 1143, 1158
Mph1103I ATGCAT 1 cut(s) 342
MroXI GAANNNNTTC 1 cut(s) 374
MseI TTAA 7 cut(s) 291, 507, 699, 932, 1074, 1175, 1206
MslI CAYNNNNRTG 2 cut(s) 178, 860
MspA1I CMGCKG 1 cut(s) 850
MspI CCGG 1 cut(s) 216
MspR9I CCNGG 1 cut(s) 216
Mva1269I GAATGC 2 cut(s) 142, 1153
MwoI GCNNNNNNNGC 2 cut(s) 211, 856
NciI CCSGG 1 cut(s) 216
NdeII GATC 4 cut(s) 3, 220, 496, 844
NlaIII CATG 6 cut(s) 113, 205, 344, 395, 688, 859
NlaIV GGNNCC 6 cut(s) 53, 99, 474, 498, 1010, 1123
NmuCI GTSAC 3 cut(s) 19, 862, 965
NsiI ATGCAT 1 cut(s) 342
NspV TTCGAA 1 cut(s) 814
PcsI WCGNNNNNNNCGW 1 cut(s) 172
PctI GAATGC 2 cut(s) 142, 1153
PdmI GAANNNNTTC 1 cut(s) 374
PfeI GAWTC 7 cut(s) 417, 551, 670, 681, 719, 785, 1040
PflMI CCANNNNNTGG 1 cut(s) 1208
PkrI GCNGC 2 cut(s) 124, 921
PleI GAGTC 1 cut(s) 946
PpsI GAGTC 1 cut(s) 946
PshAI GACNNNNGTC 1 cut(s) 392
PshBI ATTAAT 1 cut(s) 1206
Psp1406I AACGTT 1 cut(s) 294
PspN4I GGNNCC 6 cut(s) 53, 99, 474, 498, 1010, 1123
PspPI GGNCC 4 cut(s) 344, 422, 445, 472
PsuI RGATCY 1 cut(s) 496
PvuII CAGCTG 1 cut(s) 850
RsaI GTAC 4 cut(s) 169, 709, 831, 1169
RsaNI GTAC 4 cut(s) 168, 708, 830, 1168
RseI CAYNNNNRTG 2 cut(s) 178, 860
SaqAI TTAA 7 cut(s) 291, 507, 699, 932, 1074, 1175, 1206
SatI GCNGC 2 cut(s) 123, 920
Sau3AI GATC 4 cut(s) 3, 220, 496, 844
Sau96I GGNCC 4 cut(s) 344, 422, 445, 472
SchI GAGTC 1 cut(s) 946
ScrFI CCNGG 1 cut(s) 216
SduI GDGCHC 2 cut(s) 431, 458
SfaNI GCATC 2 cut(s) 392, 619
SfuI TTCGAA 1 cut(s) 814
SinI GGWCC 1 cut(s) 344
SmiMI CAYNNNNRTG 2 cut(s) 178, 860
SmlI CTYRAG 2 cut(s) 397, 760
SmoI CTYRAG 2 cut(s) 397, 760
SpeI ACTAGT 1 cut(s) 23
Sse9I AATT 5 cut(s) 231, 349, 1069, 1108, 1203
SspMI CTAG 3 cut(s) 24, 275, 1219
StyD4I CCNGG 1 cut(s) 214
StyI CCWWGG 1 cut(s) 940
TaaI ACNGT 5 cut(s) 61, 323, 521, 971, 1051
TaiI ACGT 3 cut(s) 178, 297, 813
TaqI TCGA 5 cut(s) 105, 178, 814, 1043, 1066
TasI AATT 5 cut(s) 231, 349, 1069, 1108, 1203
TatI WGTACW 3 cut(s) 707, 829, 1167
TfiI GAWTC 7 cut(s) 417, 551, 670, 681, 719, 785, 1040
Tru1I TTAA 7 cut(s) 291, 507, 699, 932, 1074, 1175, 1206
Tru9I TTAA 7 cut(s) 291, 507, 699, 932, 1074, 1175, 1206
TscAI CASTG 2 cut(s) 64, 553
TseFI GTSAC 3 cut(s) 19, 862, 965
TseI GCWGC 2 cut(s) 122, 919
Tsp45I GTSAC 3 cut(s) 19, 862, 965
TspDTI ATGAA 2 cut(s) 104, 556
TspRI CASTG 2 cut(s) 64, 553
Van91I CCANNNNNTGG 1 cut(s) 1208
VpaK11BI GGWCC 1 cut(s) 344
VspI ATTAAT 1 cut(s) 1206
XapI RAATTY 2 cut(s) 349, 1069
XcmI CCANNNNNNNNNTGG 1 cut(s) 604
XmiI GTMKAC 2 cut(s) 258, 654
XmnI GAANNNNTTC 1 cut(s) 374
XspI CTAG 3 cut(s) 24, 275, 1219
Zsp2I ATGCAT 1 cut(s) 342
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.