FvH4_4g29110

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000064
Physical Location & Seq
Reverse (-)
29405373 .. 29406629
1257 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29110.t1

Sequence Viewer

Length: 1257 bp
ATGAGTGAAACCACCAACTATCCAAAGCCAAATAAAAAGCTGTGTATTCGCGGGAACAAGGCTATGGAATCAGAATGGCAAAATCTTCCAATGGATGTTGCCTTCTTGATTCAAGATAAGTTGTTTGAGCCTGTTGACCATCTCTGTTTCGCCAGGGTTTGCAAAGAATGGGAATCCCTTTCAAAAGACTATAACAAGGCAACACACCATTTGCGAGAGGGCAAAGTACTTCCCATTTTCTGGAACTCTACCGACTTCCATTCCAAATCCGAAGGACATCCAGGACTGCAGAGCATTTCTACAGAAAAGAGGTACAACAAGATTCGTTTGCCACTGACTTATGGCAAGAGGTGTTGTGGCTCTAGCCATGGCTGGTTGGCCACAGTAGATCTAGTAGGTCTATCTCTGAACATAACTCTGGTGTATCCCTTCAAAAAATCAGTGGCGCCAATTTGTCTTCCTCCCTTGGACTTCATGGTCAAGTCCTCCATATTAGAGGATGACCTGAACTACTACATTATCAACTACAAGAAATACATCCCAAATGTTATATTGTCCGCAAATCCAAACTTGCAACCGGACAATTATCTGGTCATTGCGCTCTACGACTGTGATACAAAGCTGGCTTTCATTAAAGGAGGACAAGAGCATTGGAAAGATTGGGTTTACTTGGATAGGCGGCAACGCTGCCTTCATGATGTTACATTCTATAAAAATCAAATCTTCGTTGTTGGACGTCGGGGAAGGATTGTATCGTTTGATGTTAATGACTGTAATGTACCTAGAAAGCGGCCAAAAGCAAAGAGACTTACGCCACCAGCCCCCTTCAGAACCTATGCTGCTAATTCCTACCTTGTGAAATCAAGCAAGGGAGACCATCTGTGGCATGTTCGAAGACTACTTTCATTTTGTAATGTGACGAATATACACAAGTATAGGGAGAAGTTCATGGTTTACAAGGTAGTGTTCGACCTCAAAAAGGGAGCGGTTGTGCAGCAAGTTGAGGTGAAAAGCATCGGAGATGAGGCTATGTTTTTGGGTGGCGGTCATTCTGTGTCGGTTTTGGCTTCAAACTTTCCTGGTTGTAAGCCGAATTCAATATACTACACCAACTACGATGTACCTTATTTTGAACATGCCGACCGCAAACCATATCGTATCCTCAGTTTGGAGAATCAGAATGTTACACTGCACGAGGTTTGCTCTCGCCATGCACAACTTGCAGGTGGAGTTTGGATTCTGCCGGCGTTCAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

419

Amino Acids

48.18

Weight (kDa)

9.28

Isoelectric Point (pI)

39.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 98 - 378 5.1e-47 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1214
AasI GACNNNNNNGTC 1 cut(s) 476
AatII GACGTC 1 cut(s) 739
Acc36I ACCTGC 1 cut(s) 1214
AccB1I GGYRCC 1 cut(s) 445
AccB7I CCANNNNNTGG 1 cut(s) 240
AccBSI CCGCTC 1 cut(s) 986
AccII CGCG 1 cut(s) 51
AciI CCGC 7 cut(s) 51, 558, 679, 790, 986, 1044, 1144
AcoI YGGCCR 2 cut(s) 378, 791
AcsI RAATTY 1 cut(s) 1093
AcuI CTGAAG 1 cut(s) 811
AcyI GRCGYC 2 cut(s) 446, 736
AfaI GTAC 4 cut(s) 228, 314, 780, 1122
AfiI CCNNNNNNNGG 3 cut(s) 240, 979, 1168
AgsI TTSAA 7 cut(s) 113, 183, 433, 1071, 1098, 1133, 1252
AjnI CCWGG 3 cut(s) 152, 280, 1078
AluBI AGCT 2 cut(s) 40, 622
AluI AGCT 2 cut(s) 40, 622
Alw26I GTCTC 2 cut(s) 799, 867
AoxI GGCC 2 cut(s) 378, 791
ApeKI GCWGC 3 cut(s) 687, 839, 994
ApoI RAATTY 1 cut(s) 1093
AspLEI GCGC 2 cut(s) 448, 601
AsuHPI GGTGA 1 cut(s) 1018
AsuII TTCGAA 1 cut(s) 892
BalI TGGCCA 1 cut(s) 380
BanI GGYRCC 1 cut(s) 445
BauI CACGAG 1 cut(s) 1193
BbsI GAAGAC 2 cut(s) 449, 901
BbvI GCAGC 3 cut(s) 674, 826, 1006
BccI CCATC 2 cut(s) 147, 885
BciT130I CCWGG 3 cut(s) 154, 282, 1080
BciVI GTATCC 2 cut(s) 435, 1169
BcoDI GTCTC 2 cut(s) 799, 867
BfaI CTAG 3 cut(s) 363, 392, 783
BfmI CTRYAG 2 cut(s) 287, 300
BfoI RGCGCY 1 cut(s) 449
BfuAI ACCTGC 1 cut(s) 1214
BfuI GTATCC 2 cut(s) 435, 1169
BglII AGATCT 1 cut(s) 388
BisI GCNGC 5 cut(s) 680, 688, 791, 840, 995
BlsI GCNGC 5 cut(s) 681, 689, 792, 841, 996
BmcAI AGTACT 1 cut(s) 228
Bme1390I CCNGG 3 cut(s) 154, 282, 1080
BmiI GGNNCC 1 cut(s) 447
BmrFI CCNGG 3 cut(s) 154, 282, 1080
BmsI GCATC 1 cut(s) 1023
BpiI GAAGAC 2 cut(s) 449, 901
BplI GAGNNNNNCTC 2 cut(s) 1187, 1219
Bpu14I TTCGAA 1 cut(s) 892
BsaHI GRCGYC 2 cut(s) 446, 736
BsaI GGTCTC 1 cut(s) 867
BsaJI CCNNGG 3 cut(s) 153, 367, 465
BsaWI WCCGGW 1 cut(s) 577
BsaXI ACNNNNNCTCC 2 cut(s) 975, 1005
Bsc4I CCNNNNNNNGG 3 cut(s) 240, 979, 1168
Bse118I RCCGGY 1 cut(s) 1243
Bse3DI GCAATG 1 cut(s) 594
BseBI CCWGG 3 cut(s) 154, 282, 1080
BseDI CCNNGG 3 cut(s) 153, 367, 465
BseGI GGATG 4 cut(s) 100, 277, 505, 537
BseLI CCNNNNNNNGG 3 cut(s) 240, 979, 1168
BseMI GCAATG 1 cut(s) 594
BseMII CTCAG 1 cut(s) 1177
BseXI GCAGC 3 cut(s) 674, 826, 1006
BsgI GTGCAG 2 cut(s) 1013, 1175
Bsh1236I CGCG 1 cut(s) 51
Bsh1285I CGRYCG 1 cut(s) 1144
BshFI GGCC 2 cut(s) 380, 793
BshNI GGYRCC 1 cut(s) 445
BsiEI CGRYCG 1 cut(s) 1144
BsiSI CCGG 2 cut(s) 578, 1244
BslI CCNNNNNNNGG 3 cut(s) 240, 979, 1168
BsmAI GTCTC 2 cut(s) 799, 867
BsnI GGCC 2 cut(s) 380, 793
Bso31I GGTCTC 1 cut(s) 867
Bsp119I TTCGAA 1 cut(s) 892
Bsp143I GATC 1 cut(s) 388
Bsp19I CCATGG 1 cut(s) 367
BspACI CCGC 7 cut(s) 51, 558, 679, 790, 986, 1044, 1144
BspANI GGCC 2 cut(s) 380, 793
BspCNI CTCAG 1 cut(s) 1176
BspFNI CGCG 1 cut(s) 51
BspHI TCATGA 1 cut(s) 694
BspLI GGNNCC 1 cut(s) 447
BspMAI CTGCAG 1 cut(s) 291
BspMI ACCTGC 1 cut(s) 1214
BspT104I TTCGAA 1 cut(s) 892
BspT107I GGYRCC 1 cut(s) 445
BspTNI GGTCTC 1 cut(s) 867
BsrBI CCGCTC 1 cut(s) 986
BsrDI GCAATG 1 cut(s) 594
BsrFI RCCGGY 1 cut(s) 1243
BssAI RCCGGY 1 cut(s) 1243
BssECI CCNNGG 3 cut(s) 153, 367, 465
BssMI GATC 1 cut(s) 388
BssNI GRCGYC 2 cut(s) 446, 736
BssSI CACGAG 1 cut(s) 1193
BssT1I CCWWGG 2 cut(s) 367, 465
Bst2BI CACGAG 1 cut(s) 1193
Bst2UI CCWGG 3 cut(s) 154, 282, 1080
Bst4CI ACNGT 3 cut(s) 385, 611, 773
BstACI GRCGYC 2 cut(s) 446, 736
BstAPI GCANNNNNTGC 1 cut(s) 1220
BstBI TTCGAA 1 cut(s) 892
BstC8I GCNNGC 2 cut(s) 624, 1245
BstDEI CTNAG 1 cut(s) 1163
BstDSI CCRYGG 1 cut(s) 367
BstENI CCTNNNNNAGG 1 cut(s) 977
BstF5I GGATG 4 cut(s) 100, 277, 505, 537
BstFNI CGCG 1 cut(s) 51
BstH2I RGCGCY 1 cut(s) 449
BstHHI GCGC 2 cut(s) 448, 601
BstKTI GATC 1 cut(s) 391
BstMAI GTCTC 2 cut(s) 799, 867
BstMBI GATC 1 cut(s) 388
BstMCI CGRYCG 1 cut(s) 1144
BstMWI GCNNNNNNNGC 1 cut(s) 1220
BstNI CCWGG 3 cut(s) 154, 282, 1080
BstNSI RCATGY 2 cut(s) 890, 1139
BstSCI CCNGG 3 cut(s) 152, 280, 1078
BstSFI CTRYAG 2 cut(s) 287, 300
BstUI CGCG 1 cut(s) 51
BstV1I GCAGC 3 cut(s) 674, 826, 1006
BstV2I GAAGAC 2 cut(s) 449, 901
BstX2I RGATCY 1 cut(s) 388
BstYI RGATCY 1 cut(s) 388
BsuI GTATCC 2 cut(s) 435, 1169
BsuRI GGCC 2 cut(s) 380, 793
BtgI CCRYGG 1 cut(s) 367
BtsCI GGATG 4 cut(s) 100, 277, 505, 537
BtsI GCAGTG 1 cut(s) 1187
BtsIMutI CAGTG 3 cut(s) 332, 447, 1187
BveI ACCTGC 1 cut(s) 1214
Cac8I GCNNGC 2 cut(s) 624, 1245
CciI TCATGA 1 cut(s) 694
CfoI GCGC 2 cut(s) 448, 601
Cfr10I RCCGGY 1 cut(s) 1243
Csp6I GTAC 4 cut(s) 227, 313, 779, 1121
CviAII CATG 7 cut(s) 368, 475, 695, 887, 949, 1136, 1211
CviQI GTAC 4 cut(s) 227, 313, 779, 1121
DdeI CTNAG 1 cut(s) 1163
DinI GGCGCC 1 cut(s) 447
DpnI GATC 1 cut(s) 390
DpnII GATC 1 cut(s) 388
DrdI GACNNNNNNGTC 1 cut(s) 476
DseDI GACNNNNNNGTC 1 cut(s) 476
EaeI YGGCCR 2 cut(s) 378, 791
Eco130I CCWWGG 2 cut(s) 367, 465
Eco31I GGTCTC 1 cut(s) 867
Eco57I CTGAAG 1 cut(s) 811
EcoNI CCTNNNNNAGG 1 cut(s) 977
EcoRI GAATTC 1 cut(s) 1093
EcoRII CCWGG 3 cut(s) 152, 280, 1078
EcoT14I CCWWGG 2 cut(s) 367, 465
EgeI GGCGCC 1 cut(s) 447
EheI GGCGCC 1 cut(s) 447
ErhI CCWWGG 2 cut(s) 367, 465
FaeI CATG 7 cut(s) 371, 478, 698, 890, 952, 1139, 1214
FatI CATG 7 cut(s) 367, 474, 694, 886, 948, 1135, 1210
FauI CCCGC 1 cut(s) 44
Fnu4HI GCNGC 5 cut(s) 680, 688, 791, 840, 995
FokI GGATG 4 cut(s) 107, 264, 512, 524
Fsp4HI GCNGC 5 cut(s) 680, 688, 791, 840, 995
FspBI CTAG 3 cut(s) 363, 392, 783
GlaI GCGC 2 cut(s) 447, 600
GluI GCNGC 5 cut(s) 680, 688, 791, 840, 995
HaeII RGCGCY 1 cut(s) 449
HaeIII GGCC 2 cut(s) 380, 793
HapII CCGG 2 cut(s) 578, 1244
HhaI GCGC 2 cut(s) 448, 601
Hin1I GRCGYC 2 cut(s) 446, 736
Hin1II CATG 7 cut(s) 371, 478, 698, 890, 952, 1139, 1214
Hin6I GCGC 2 cut(s) 446, 599
HinP1I GCGC 2 cut(s) 446, 599
HincII GTYRAC 1 cut(s) 136
HindII GTYRAC 1 cut(s) 136
HinfI GANTC 6 cut(s) 68, 109, 173, 322, 1174, 1237
HpaII CCGG 2 cut(s) 578, 1244
HphI GGTGA 1 cut(s) 1018
Hpy166II GTNNAC 3 cut(s) 136, 667, 955
Hpy188I TCNGA 6 cut(s) 73, 271, 408, 830, 1019, 1179
Hpy188III TCNNGA 4 cut(s) 106, 113, 241, 695
Hpy8I GTNNAC 3 cut(s) 136, 667, 955
Hpy99I CGWCG 1 cut(s) 741
HpyAV CCTTC 6 cut(s) 112, 266, 439, 701, 738, 835
HpyCH4III ACNGT 3 cut(s) 385, 611, 773
HpyCH4IV ACGT 1 cut(s) 736
HpyCH4V TGCA 7 cut(s) 162, 289, 574, 994, 1192, 1214, 1223
HpyF10VI GCNNNNNNNGC 1 cut(s) 1220
HpyF3I CTNAG 1 cut(s) 1163
HpySE526I ACGT 1 cut(s) 736
Hsp92I GRCGYC 2 cut(s) 446, 736
Hsp92II CATG 7 cut(s) 371, 478, 698, 890, 952, 1139, 1214
HspAI GCGC 2 cut(s) 446, 599
KasI GGCGCC 1 cut(s) 445
KroI GCCGGC 1 cut(s) 1243
KroNI GCCGGC 1 cut(s) 1245
Kzo9I GATC 1 cut(s) 388
LmnI GCTCC 1 cut(s) 983
Lsp1109I GCAGC 3 cut(s) 674, 826, 1006
LweI GCATC 1 cut(s) 1023
MaeI CTAG 3 cut(s) 363, 392, 783
MaeII ACGT 1 cut(s) 736
MaeIII GTNAC 3 cut(s) 700, 916, 1183
MalI GATC 1 cut(s) 390
MbiI CCGCTC 1 cut(s) 986
MboI GATC 1 cut(s) 388
MboII GAAGA 4 cut(s) 77, 449, 715, 906
MfeI CAATTG 1 cut(s) 1252
MflI RGATCY 1 cut(s) 388
MlsI TGGCCA 1 cut(s) 380
MluCI AATT 5 cut(s) 450, 583, 844, 1093, 1252
MluNI TGGCCA 1 cut(s) 380
Mly113I GGCGCC 1 cut(s) 446
MmeI TCCRAC 1 cut(s) 712
Mox20I TGGCCA 1 cut(s) 380
MroNI GCCGGC 1 cut(s) 1243
MscI TGGCCA 1 cut(s) 380
MseI TTAA 2 cut(s) 633, 765
Msp20I TGGCCA 1 cut(s) 380
MspI CCGG 2 cut(s) 578, 1244
MspR9I CCNGG 3 cut(s) 154, 282, 1080
MunI CAATTG 1 cut(s) 1252
MvaI CCWGG 3 cut(s) 154, 282, 1080
MvnI CGCG 1 cut(s) 51
MwoI GCNNNNNNNGC 1 cut(s) 1220
NaeI GCCGGC 1 cut(s) 1245
NarI GGCGCC 1 cut(s) 446
NcoI CCATGG 1 cut(s) 367
NdeII GATC 1 cut(s) 388
NgoMIV GCCGGC 1 cut(s) 1243
NlaIII CATG 7 cut(s) 371, 478, 698, 890, 952, 1139, 1214
NlaIV GGNNCC 1 cut(s) 447
NmuCI GTSAC 1 cut(s) 916
NspI RCATGY 2 cut(s) 890, 1139
NspV TTCGAA 1 cut(s) 892
PagI TCATGA 1 cut(s) 694
PaqCI CACCTGC 1 cut(s) 1214
PdiI GCCGGC 1 cut(s) 1245
PfeI GAWTC 6 cut(s) 68, 109, 173, 322, 1174, 1237
PflMI CCANNNNNTGG 1 cut(s) 240
PfoI TCCNGGA 1 cut(s) 280
PkrI GCNGC 5 cut(s) 681, 689, 792, 841, 996
PluTI GGCGCC 1 cut(s) 449
Psp6I CCWGG 3 cut(s) 152, 280, 1078
PspGI CCWGG 3 cut(s) 152, 280, 1078
PspN4I GGNNCC 1 cut(s) 447
PstI CTGCAG 1 cut(s) 291
PsuI RGATCY 1 cut(s) 388
RsaI GTAC 4 cut(s) 228, 314, 780, 1122
RsaNI GTAC 4 cut(s) 227, 313, 779, 1121
SaqAI TTAA 2 cut(s) 633, 765
SatI GCNGC 5 cut(s) 680, 688, 791, 840, 995
Sau3AI GATC 1 cut(s) 388
ScaI AGTACT 1 cut(s) 228
ScrFI CCNGG 3 cut(s) 154, 282, 1080
SfaNI GCATC 1 cut(s) 1023
SfcI CTRYAG 2 cut(s) 287, 300
SfoI GGCGCC 1 cut(s) 447
SfuI TTCGAA 1 cut(s) 892
Sse9I AATT 5 cut(s) 450, 583, 844, 1093, 1252
SsiI CCGC 7 cut(s) 51, 558, 679, 790, 986, 1044, 1144
SspDI GGCGCC 1 cut(s) 445
SspMI CTAG 3 cut(s) 363, 392, 783
StyD4I CCNGG 3 cut(s) 152, 280, 1078
StyI CCWWGG 2 cut(s) 367, 465
TaaI ACNGT 3 cut(s) 385, 611, 773
TaiI ACGT 1 cut(s) 739
TaqI TCGA 2 cut(s) 892, 969
TasI AATT 5 cut(s) 450, 583, 844, 1093, 1252
TatI WGTACW 1 cut(s) 226
TauI GCSGC 2 cut(s) 682, 793
TfiI GAWTC 6 cut(s) 68, 109, 173, 322, 1174, 1237
Tru1I TTAA 2 cut(s) 633, 765
Tru9I TTAA 2 cut(s) 633, 765
TscAI CASTG 3 cut(s) 339, 447, 1194
TseFI GTSAC 1 cut(s) 916
TseI GCWGC 3 cut(s) 687, 839, 994
Tsp45I GTSAC 1 cut(s) 916
TspDTI ATGAA 5 cut(s) 463, 619, 683, 894, 937
TspRI CASTG 3 cut(s) 339, 447, 1194
Van91I CCANNNNNTGG 1 cut(s) 240
XagI CCTNNNNNAGG 1 cut(s) 977
XapI RAATTY 1 cut(s) 1093
XceI RCATGY 2 cut(s) 890, 1139
XspI CTAG 3 cut(s) 363, 392, 783
ZraI GACGTC 1 cut(s) 737
ZrmI AGTACT 1 cut(s) 228
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.