FvH4_1g05332

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000064
Physical Location & Seq
Reverse (-)
2827596 .. 2828800
1205 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g05332.t1

Sequence Viewer

Length: 1164 bp
ATGTTGCGACCCAAGTCTCATTCTGTATGTTCTGATGGTTCTGAATGGGAAGCTATTCTTACAGAAGTTGCATTTTCTGTGTTGGAAAAGCTCCTAGAACCACTTGATCATGTTCGTTTCGCTACCGTTTGTAAACGATGGAGTTCAATTGCAAAAGATTACAATCAAACAACTCAGCGTTGGCGCAGTAAGCAAGTACTTCCTATGCTCATGATCCCTCCTAGTAGTGCTGCACTATCCCAAGGAGCAGTACTGTACAGCGTTTCCGGGAGAACAATGTATAACAACATCAGGTTACCGGTGCCTGCAAATGAAAAGTATTGTGGCTTTGGCCATGGTTGGTTGGCCTCCATAGACGAATCTCTGACCAACATAACTCTTAGAAAGTTCCCTGCTGACCGAAATGGCGGACTGAATGTCATTCATCTTCCTCCTCTCATACATGACTTGAATGAGAGATATAATGAAACGAAATCCGTCCCAAAGGTTATATTGTCTGCCGATCCCACTTTACATCCGGACAGTTATGTGGTCTTAGCAATTCTCTGTCATAGTCACAGAGCAGCTTACATTGCAGGACAACAAAATCATTGGAACAAAATCGCGAGTAGTGGCGGTCGTCCCAAGTATATTCATGCTACATTTTATGGAAACCTTGGCTACCTATTCAATGCCTTCGGAAGTGCTCTGATGAGATTCAATGCTGAGTGGGGTGAATGCTTGCCACAACTAGTGAATACTCAACCTCAAACCAGTCCTAAAAGTTGTTCATATCTTGTTGAATCAACCAACGGAAACCTATTGCTTGTTGAAAGAGTCTCGGCACGTAACGAAGTGTCGGCTACAAGCTTCAAAGTTTCCCAAGTGGTAAAGAAACAATACTCTGGATCCATACTTGGTGTTGACGCACAACTACTTGAGGTGAATAGCATTGGAGATGAAGCTCTGCTCGTATGTGAGAGTCATTCAATGTCTGTTTTGGCTTCGAACTTTCGTGGATGCCATCCGAATTCTATCTACTACGCTTATAATAGTGGCTCAACATGGGAGATGGGTATCTTCAGTTTAGAGAACAAAACCACCACACGACTCTACTCTCTGAATCATTGCGAATCGGACTATATGCCATTTTGGATCACACCATCGTTTGAAGGACTCTGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

388

Amino Acids

43.13

Weight (kDa)

7.6

Isoelectric Point (pI)

43.93

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 85 - 354 3e-32 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1029
AccB1I GGYRCC 1 cut(s) 301
AccII CGCG 1 cut(s) 605
AccIII TCCGGA 1 cut(s) 517
AciI CCGC 2 cut(s) 408, 615
AclWI GGATC 5 cut(s) 208, 497, 882, 895, 1142
AcoI YGGCCR 1 cut(s) 331
AcsI RAATTY 1 cut(s) 1009
AcuI CTGAAG 1 cut(s) 1045
AfaI GTAC 3 cut(s) 198, 252, 257
AgeI ACCGGT 1 cut(s) 298
AgsI TTSAA 9 cut(s) 147, 451, 670, 700, 782, 812, 853, 969, 1151
AhdI GACNNNNNGTC 1 cut(s) 416
AhlI ACTAGT 1 cut(s) 730
AluBI AGCT 5 cut(s) 53, 91, 566, 849, 944
AluI AGCT 5 cut(s) 53, 91, 566, 849, 944
Alw21I GWGCWC 1 cut(s) 688
Alw26I GTCTC 2 cut(s) 21, 823
AlwI GGATC 5 cut(s) 208, 497, 882, 895, 1142
Aor13HI TCCGGA 1 cut(s) 517
AoxI GGCC 2 cut(s) 331, 345
ApeKI GCWGC 2 cut(s) 230, 563
ApoI RAATTY 1 cut(s) 1009
AsiGI ACCGGT 1 cut(s) 298
Asp700I GAANNNNTTC 1 cut(s) 54
AspLEI GCGC 1 cut(s) 186
AsuC2I CCSGG 1 cut(s) 268
AsuHPI GGTGA 2 cut(s) 725, 934
AsuII TTCGAA 1 cut(s) 986
BalI TGGCCA 1 cut(s) 333
BamHI GGATCC 1 cut(s) 887
BanI GGYRCC 1 cut(s) 301
Bbv12I GWGCWC 1 cut(s) 688
BbvI GCAGC 2 cut(s) 217, 575
BccI CCATC 5 cut(s) 29, 132, 1011, 1045, 1150
BclI TGATCA 1 cut(s) 106
BcnI CCSGG 1 cut(s) 268
BcoDI GTCTC 2 cut(s) 21, 823
BcuI ACTAGT 1 cut(s) 730
BfaI CTAG 3 cut(s) 95, 222, 731
BisI GCNGC 2 cut(s) 231, 564
BlsI GCNGC 2 cut(s) 232, 565
BmcAI AGTACT 2 cut(s) 198, 252
Bme1390I CCNGG 1 cut(s) 268
BmeRI GACNNNNNGTC 1 cut(s) 416
BmiI GGNNCC 2 cut(s) 303, 889
BmrFI CCNGG 1 cut(s) 268
BmsI GCATC 1 cut(s) 989
BoxI GACNNNNGTC 1 cut(s) 13
Bpu14I TTCGAA 1 cut(s) 986
BpuEI CTTGAG 1 cut(s) 938
BpuMI CCSGG 1 cut(s) 268
BsaAI YACGTR 1 cut(s) 827
BsaBI GATNNNNATC 2 cut(s) 162, 1055
BsaJI CCNNGG 3 cut(s) 241, 334, 655
BsaWI WCCGGW 2 cut(s) 298, 517
Bse118I RCCGGY 1 cut(s) 298
Bse1I ACTGG 1 cut(s) 753
Bse3DI GCAATG 2 cut(s) 570, 1105
Bse8I GATNNNNATC 2 cut(s) 162, 1055
BseAI TCCGGA 1 cut(s) 517
BseDI CCNNGG 3 cut(s) 241, 334, 655
BseGI GGATG 3 cut(s) 514, 1003, 1004
BseJI GATNNNNATC 2 cut(s) 162, 1055
BseMI GCAATG 2 cut(s) 570, 1105
BseMII CTCAG 2 cut(s) 188, 696
BseNI ACTGG 1 cut(s) 753
BseRI GAGGAG 1 cut(s) 423
BseXI GCAGC 2 cut(s) 217, 575
BsgI GTGCAG 1 cut(s) 216
Bsh1236I CGCG 1 cut(s) 605
Bsh1285I CGRYCG 1 cut(s) 619
BshFI GGCC 2 cut(s) 333, 347
BshNI GGYRCC 1 cut(s) 301
BshTI ACCGGT 1 cut(s) 298
BsiEI CGRYCG 1 cut(s) 619
BsiHKAI GWGCWC 1 cut(s) 688
BsiSI CCGG 3 cut(s) 267, 299, 518
BslFI GGGAC 2 cut(s) 464, 606
BsmAI GTCTC 2 cut(s) 21, 823
BsmFI GGGAC 2 cut(s) 464, 606
BsmI GAATGC 1 cut(s) 722
BsnI GGCC 2 cut(s) 333, 347
Bsp119I TTCGAA 1 cut(s) 986
Bsp1286I GDGCHC 1 cut(s) 688
Bsp13I TCCGGA 1 cut(s) 517
Bsp1407I TGTACA 1 cut(s) 255
Bsp143I GATC 5 cut(s) 106, 213, 502, 887, 1134
Bsp19I CCATGG 1 cut(s) 334
Bsp68I TCGCGA 1 cut(s) 605
BspACI CCGC 2 cut(s) 408, 615
BspANI GGCC 2 cut(s) 333, 347
BspCNI CTCAG 2 cut(s) 187, 697
BspEI TCCGGA 1 cut(s) 517
BspFNI CGCG 1 cut(s) 605
BspHI TCATGA 1 cut(s) 210
BspLI GGNNCC 2 cut(s) 303, 889
BspPI GGATC 5 cut(s) 208, 497, 882, 895, 1142
BspT104I TTCGAA 1 cut(s) 986
BspT107I GGYRCC 1 cut(s) 301
BsrDI GCAATG 2 cut(s) 570, 1105
BsrFI RCCGGY 1 cut(s) 298
BsrGI TGTACA 1 cut(s) 255
BsrI ACTGG 1 cut(s) 753
BssAI RCCGGY 1 cut(s) 298
BssECI CCNNGG 3 cut(s) 241, 334, 655
BssMI GATC 5 cut(s) 106, 213, 502, 887, 1134
BssT1I CCWWGG 3 cut(s) 241, 334, 655
Bst4CI ACNGT 3 cut(s) 127, 255, 524
BstAUI TGTACA 1 cut(s) 255
BstBAI YACGTR 1 cut(s) 827
BstBI TTCGAA 1 cut(s) 986
BstC8I GCNNGC 2 cut(s) 306, 722
BstDEI CTNAG 4 cut(s) 174, 380, 535, 705
BstDSI CCRYGG 1 cut(s) 334
BstEII GGTNACC 1 cut(s) 294
BstF5I GGATG 3 cut(s) 514, 1003, 1004
BstFNI CGCG 1 cut(s) 605
BstHHI GCGC 1 cut(s) 186
BstKTI GATC 5 cut(s) 109, 216, 505, 890, 1137
BstMAI GTCTC 2 cut(s) 21, 823
BstMBI GATC 5 cut(s) 106, 213, 502, 887, 1134
BstMCI CGRYCG 1 cut(s) 619
BstMWI GCNNNNNNNGC 2 cut(s) 190, 572
BstPAI GACNNNNGTC 1 cut(s) 13
BstPI GGTNACC 1 cut(s) 294
BstSCI CCNGG 1 cut(s) 266
BstUI CGCG 1 cut(s) 605
BstV1I GCAGC 2 cut(s) 217, 575
BstX2I RGATCY 1 cut(s) 887
BstYI RGATCY 1 cut(s) 887
BsuRI GGCC 2 cut(s) 333, 347
BtgI CCRYGG 1 cut(s) 334
BtsCI GGATG 3 cut(s) 514, 1003, 1004
BtuMI TCGCGA 1 cut(s) 605
Cac8I GCNNGC 2 cut(s) 306, 722
CciI TCATGA 1 cut(s) 210
CfoI GCGC 1 cut(s) 186
Cfr10I RCCGGY 1 cut(s) 298
CseI GACGC 1 cut(s) 914
Csp6I GTAC 3 cut(s) 197, 251, 256
CspAI ACCGGT 1 cut(s) 298
CviAII CATG 6 cut(s) 110, 211, 335, 443, 635, 1044
CviQI GTAC 3 cut(s) 197, 251, 256
DdeI CTNAG 4 cut(s) 174, 380, 535, 705
DpnI GATC 5 cut(s) 108, 215, 504, 889, 1136
DpnII GATC 5 cut(s) 106, 213, 502, 887, 1134
DriI GACNNNNNGTC 1 cut(s) 416
EaeI YGGCCR 1 cut(s) 331
Eam1105I GACNNNNNGTC 1 cut(s) 416
EciI GGCGGA 1 cut(s) 423
Eco130I CCWWGG 3 cut(s) 241, 334, 655
Eco57I CTGAAG 1 cut(s) 1045
Eco91I GGTNACC 1 cut(s) 294
EcoO65I GGTNACC 1 cut(s) 294
EcoRI GAATTC 1 cut(s) 1009
EcoT14I CCWWGG 3 cut(s) 241, 334, 655
ErhI CCWWGG 3 cut(s) 241, 334, 655
FaeI CATG 6 cut(s) 113, 214, 338, 446, 638, 1047
FalI AAGNNNNNCTT 2 cut(s) 42, 74
FaqI GGGAC 2 cut(s) 464, 606
FatI CATG 6 cut(s) 109, 210, 334, 442, 634, 1043
FbaI TGATCA 1 cut(s) 106
Fnu4HI GCNGC 2 cut(s) 231, 564
FokI GGATG 3 cut(s) 501, 990, 1011
Fsp4HI GCNGC 2 cut(s) 231, 564
FspBI CTAG 3 cut(s) 95, 222, 731
GlaI GCGC 1 cut(s) 185
GluI GCNGC 2 cut(s) 231, 564
HaeIII GGCC 2 cut(s) 333, 347
HapII CCGG 3 cut(s) 267, 299, 518
HgaI GACGC 1 cut(s) 914
HhaI GCGC 1 cut(s) 186
Hin1II CATG 6 cut(s) 113, 214, 338, 446, 638, 1047
Hin6I GCGC 1 cut(s) 184
HinP1I GCGC 1 cut(s) 184
HincII GTYRAC 1 cut(s) 904
HindII GTYRAC 1 cut(s) 904
HindIII AAGCTT 1 cut(s) 847
HinfI GANTC 9 cut(s) 359, 696, 782, 816, 961, 1089, 1102, 1112, 1155
HpaII CCGG 3 cut(s) 267, 299, 518
HphI GGTGA 2 cut(s) 725, 934
Hpy166II GTNNAC 2 cut(s) 134, 904
Hpy188I TCNGA 8 cut(s) 34, 43, 366, 680, 690, 1008, 1101, 1117
Hpy188III TCNNGA 4 cut(s) 211, 518, 604, 885
Hpy8I GTNNAC 2 cut(s) 134, 904
HpyAV CCTTC 2 cut(s) 685, 1145
HpyCH4III ACNGT 3 cut(s) 127, 255, 524
HpyCH4IV ACGT 1 cut(s) 826
HpyCH4V TGCA 5 cut(s) 71, 152, 233, 308, 575
HpyF10VI GCNNNNNNNGC 2 cut(s) 190, 572
HpyF3I CTNAG 4 cut(s) 174, 380, 535, 705
HpySE526I ACGT 1 cut(s) 826
Hsp92II CATG 6 cut(s) 113, 214, 338, 446, 638, 1047
HspAI GCGC 1 cut(s) 184
Kpn2I TCCGGA 1 cut(s) 517
Ksp22I TGATCA 1 cut(s) 106
Kzo9I GATC 5 cut(s) 106, 213, 502, 887, 1134
LmnI GCTCC 2 cut(s) 96, 245
LpnPI CCDG 9 cut(s) 277, 280, 312, 318, 405, 531, 561, 766, 870
Lsp1109I GCAGC 2 cut(s) 217, 575
LweI GCATC 1 cut(s) 989
MaeI CTAG 3 cut(s) 95, 222, 731
MaeII ACGT 1 cut(s) 826
MaeIII GTNAC 3 cut(s) 294, 554, 827
MalI GATC 5 cut(s) 108, 215, 504, 889, 1136
MboI GATC 5 cut(s) 106, 213, 502, 887, 1134
MboII GAAGA 2 cut(s) 419, 1051
MfeI CAATTG 1 cut(s) 147
MflI RGATCY 1 cut(s) 887
MhlI GDGCHC 1 cut(s) 688
MlsI TGGCCA 1 cut(s) 333
MluCI AATT 3 cut(s) 147, 540, 1009
MluNI TGGCCA 1 cut(s) 333
MlyI GAGTC 4 cut(s) 825, 970, 1083, 1149
MmeI TCCRAC 1 cut(s) 63
MnlI CCTC 6 cut(s) 228, 358, 441, 444, 756, 913
Mox20I TGGCCA 1 cut(s) 333
MroI TCCGGA 1 cut(s) 517
MroXI GAANNNNTTC 1 cut(s) 54
MscI TGGCCA 1 cut(s) 333
Msp20I TGGCCA 1 cut(s) 333
MspI CCGG 3 cut(s) 267, 299, 518
MspR9I CCNGG 1 cut(s) 268
MunI CAATTG 1 cut(s) 147
Mva1269I GAATGC 1 cut(s) 722
MvnI CGCG 1 cut(s) 605
MwoI GCNNNNNNNGC 2 cut(s) 190, 572
NciI CCSGG 1 cut(s) 268
NcoI CCATGG 1 cut(s) 334
NdeII GATC 5 cut(s) 106, 213, 502, 887, 1134
NlaIII CATG 6 cut(s) 113, 214, 338, 446, 638, 1047
NlaIV GGNNCC 2 cut(s) 303, 889
NmeAIII GCCGAG 1 cut(s) 800
NmuCI GTSAC 1 cut(s) 554
NruI TCGCGA 1 cut(s) 605
NspV TTCGAA 1 cut(s) 986
PagI TCATGA 1 cut(s) 210
PctI GAATGC 1 cut(s) 722
PdmI GAANNNNTTC 1 cut(s) 54
PfeI GAWTC 5 cut(s) 359, 696, 782, 1102, 1112
PfoI TCCNGGA 1 cut(s) 266
PinAI ACCGGT 1 cut(s) 298
PkrI GCNGC 2 cut(s) 232, 565
PleI GAGTC 4 cut(s) 824, 969, 1083, 1149
PpsI GAGTC 4 cut(s) 824, 969, 1083, 1149
Ppu21I YACGTR 1 cut(s) 827
PshAI GACNNNNGTC 1 cut(s) 13
PsiI TTATAA 1 cut(s) 1029
PspEI GGTNACC 1 cut(s) 294
PspN4I GGNNCC 2 cut(s) 303, 889
PsuI RGATCY 1 cut(s) 887
RruI TCGCGA 1 cut(s) 605
RsaI GTAC 3 cut(s) 198, 252, 257
RsaNI GTAC 3 cut(s) 197, 251, 256
SatI GCNGC 2 cut(s) 231, 564
Sau3AI GATC 5 cut(s) 106, 213, 502, 887, 1134
ScaI AGTACT 2 cut(s) 198, 252
SchI GAGTC 4 cut(s) 825, 970, 1083, 1149
ScrFI CCNGG 1 cut(s) 268
SduI GDGCHC 1 cut(s) 688
SfaNI GCATC 1 cut(s) 989
SfuI TTCGAA 1 cut(s) 986
SmlI CTYRAG 1 cut(s) 917
SmoI CTYRAG 1 cut(s) 917
SpeI ACTAGT 1 cut(s) 730
Sse9I AATT 3 cut(s) 147, 540, 1009
SsiI CCGC 2 cut(s) 408, 615
SspMI CTAG 3 cut(s) 95, 222, 731
StyD4I CCNGG 1 cut(s) 266
StyI CCWWGG 3 cut(s) 241, 334, 655
TaaI ACNGT 3 cut(s) 127, 255, 524
TaiI ACGT 1 cut(s) 829
TaqI TCGA 1 cut(s) 986
TaqII GACCGA 1 cut(s) 414
TasI AATT 3 cut(s) 147, 540, 1009
TatI WGTACW 3 cut(s) 196, 250, 255
TfiI GAWTC 5 cut(s) 359, 696, 782, 1102, 1112
TseFI GTSAC 1 cut(s) 554
TseI GCWGC 2 cut(s) 230, 563
Tsp45I GTSAC 1 cut(s) 554
TspDTI ATGAA 6 cut(s) 327, 413, 480, 623, 759, 954
TspGWI ACGGA 2 cut(s) 466, 807
XapI RAATTY 1 cut(s) 1009
XmnI GAANNNNTTC 1 cut(s) 54
XspI CTAG 3 cut(s) 95, 222, 731
ZrmI AGTACT 2 cut(s) 198, 252
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.