RLG00000016259

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000064
Physical Location & Seq
Reverse (-)
5155908 .. 5157132
1225 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016259

Sequence Viewer

Length: 1101 bp
ATGAAGAACCCCTGTGACACAAGCAGTTGTCACCAATCATATTTGGACTGGGCAGCAAGTCTTCCGGAGGATCTTGTGTTTACTATTCTGGATAACCTATTGGAACCCATTGACCATGTTCATTTTGCTGCTGTCTGCAAGCTTTGGCGTTCCCTTGCGAAACACTACAATCGTTCAACACATCGCTGGCCCAAGCTAGTCCCTCCCATGCTCATGTTCCGGAATAGTTTTAGTACTACTCCATGGGTACTTTATAGCCTATCTGAAGGAAACATTTACGACAATATTAACATAAGATGTACAATGCCTGGTTTTGGTAATCTCAGGGCTAACAGATACTATGGCTGTGGCCATGGTTGGTTGGCCACAGTAGATGATCAGCTGGCTGGACTTCCTGTTCTAAATCTCGTAAACCCTTTCAGAAAAGAAATCATTCCTTTGAATCGCATCGGATGTCCCCTGGTCATGAGCTCTAAGCCAAAGGAGTTCCCAAAGCTGATCTTGTACGGCGTTCCCACACTAAAAGGGGACAACAGCTTTATGGTTGTAGCAATATACAATCAAGGTTCCAGTCTTGCTTTCACTAGAGGGGGGCAACGTTTTTGGACTTCGATAGAAACCTATGGACATTATTCGATTAATGGGGTTGTGTTTTACAAAGGTTCATATCTTGTGGAATCAACTAAAGGAGAGCTTTTGCTCGTTCGAAGATTTTTTACACTACGGATAGAAAGGAATCAAGGGGCAATGCCTTTCACTCACACCTTCGAGGTTTACAAGTTGGTGTTCGATGACACCGGATCCATTGTGAAGCAGGTCGAGTTAAAAACCACTGGAGATGAGACTCTGTTTGTTGGTGACAGTCAATCAATGTCTGTTTTGGCCAAGAGTTTTTCTTGGTGCAAACCGAACTCCATTTATTATACAAGCGATTCGTTGACTGTGGATGAATACCTAAATTTTAATGGGAGAGATATGGGAATTTTTTATTTAAAGCAGGGATCCACTACTCCTATACAGTGTCACCCTCAGGATTTAATGTACCATTACACATCACAACCCGCAGTTTGGATTCTGCCTCCAATTAATGGCCTATGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

367

Amino Acids

41.64

Weight (kDa)

8.28

Isoelectric Point (pI)

49.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 19 - 54 3.7e-06 F-box-like
Beta-prop_KIB1-4 PF03478 84 - 221 6.5e-13 KIB1-4 beta-propeller
Beta-prop_KIB1-4 PF03478 221 - 329 3.2e-17 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 805
AccB7I CCANNNNNTGG 1 cut(s) 1088
AccIII TCCGGA 2 cut(s) 64, 219
AciI CCGC 1 cut(s) 1062
AclI AACGTT 1 cut(s) 598
AclWI GGATC 5 cut(s) 78, 795, 808, 996, 1009
AcoI YGGCCR 3 cut(s) 349, 363, 882
AcsI RAATTY 2 cut(s) 958, 981
AcuI CTGAAG 1 cut(s) 285
AfaI GTAC 5 cut(s) 235, 249, 301, 506, 1043
AfiI CCNNNNNNNGG 3 cut(s) 314, 1068, 1088
AgsI TTSAA 2 cut(s) 177, 442
AjnI CCWGG 2 cut(s) 307, 459
AloI GAACNNNNNNTCC 2 cut(s) 381, 413
AluBI AGCT 7 cut(s) 142, 196, 382, 471, 496, 537, 694
AluI AGCT 7 cut(s) 142, 196, 382, 471, 496, 537, 694
Alw21I GWGCWC 1 cut(s) 473
Alw26I GTCTC 1 cut(s) 836
AlwI GGATC 5 cut(s) 78, 795, 808, 996, 1009
Aor13HI TCCGGA 2 cut(s) 64, 219
AoxI GGCC 5 cut(s) 188, 349, 363, 882, 1090
ApeKI GCWGC 2 cut(s) 53, 128
ApoI RAATTY 2 cut(s) 958, 981
AseI ATTAAT 2 cut(s) 639, 1086
Asp700I GAANNNNTTC 1 cut(s) 432
AspS9I GGNCC 1 cut(s) 189
AsuHPI GGTGA 3 cut(s) 23, 869, 1016
AsuII TTCGAA 1 cut(s) 706
AxyI CCTNAGG 1 cut(s) 1029
BalI TGGCCA 3 cut(s) 351, 365, 884
BamHI GGATCC 2 cut(s) 800, 1001
BanII GRGCYC 1 cut(s) 473
BarI GAAGNNNNNNTAC 2 cut(s) 700, 732
BbsI GAAGAC 1 cut(s) 53
Bbv12I GWGCWC 1 cut(s) 473
BbvI GCAGC 2 cut(s) 65, 115
BceAI ACGGC 1 cut(s) 523
BciT130I CCWGG 2 cut(s) 309, 461
BclI TGATCA 1 cut(s) 376
BcoDI GTCTC 1 cut(s) 836
BfaI CTAG 3 cut(s) 197, 585, 1099
BfuAI ACCTGC 1 cut(s) 805
BisI GCNGC 2 cut(s) 54, 129
BlsI GCNGC 2 cut(s) 55, 130
BmcAI AGTACT 1 cut(s) 235
Bme1390I CCNGG 2 cut(s) 309, 461
BmgT120I GGNCC 1 cut(s) 189
BmiI GGNNCC 4 cut(s) 105, 568, 802, 1003
BmrFI CCNGG 2 cut(s) 309, 461
BmrI ACTGGG 1 cut(s) 58
BmsI GCATC 1 cut(s) 456
BmuI ACTGGG 1 cut(s) 58
BpiI GAAGAC 1 cut(s) 53
BpmI CTGGAG 1 cut(s) 855
Bpu14I TTCGAA 1 cut(s) 706
BsaJI CCNNGG 3 cut(s) 242, 352, 459
BsaWI WCCGGW 3 cut(s) 64, 219, 797
Bsc4I CCNNNNNNNGG 3 cut(s) 314, 1068, 1088
Bse1I ACTGG 3 cut(s) 53, 570, 838
Bse21I CCTNAGG 1 cut(s) 1029
Bse3DI GCAATG 1 cut(s) 753
BseAI TCCGGA 2 cut(s) 64, 219
BseBI CCWGG 2 cut(s) 309, 461
BseDI CCNNGG 3 cut(s) 242, 352, 459
BseGI GGATG 2 cut(s) 458, 952
BseLI CCNNNNNNNGG 3 cut(s) 314, 1068, 1088
BseMI GCAATG 1 cut(s) 753
BseMII CTCAG 2 cut(s) 337, 1043
BseNI ACTGG 3 cut(s) 53, 570, 838
BseXI GCAGC 2 cut(s) 65, 115
BshFI GGCC 5 cut(s) 190, 351, 365, 884, 1092
BsiHKAI GWGCWC 1 cut(s) 473
BsiSI CCGG 3 cut(s) 65, 220, 798
BslFI GGGAC 3 cut(s) 185, 441, 542
BslI CCNNNNNNNGG 3 cut(s) 314, 1068, 1088
BsmAI GTCTC 1 cut(s) 836
BsmFI GGGAC 3 cut(s) 185, 441, 542
BsnI GGCC 5 cut(s) 190, 351, 365, 884, 1092
Bsp119I TTCGAA 1 cut(s) 706
Bsp1286I GDGCHC 1 cut(s) 473
Bsp13I TCCGGA 2 cut(s) 64, 219
Bsp1407I TGTACA 1 cut(s) 299
Bsp143I GATC 5 cut(s) 70, 376, 498, 800, 1001
Bsp19I CCATGG 2 cut(s) 242, 352
BspACI CCGC 1 cut(s) 1062
BspANI GGCC 5 cut(s) 190, 351, 365, 884, 1092
BspCNI CTCAG 2 cut(s) 336, 1042
BspEI TCCGGA 2 cut(s) 64, 219
BspHI TCATGA 1 cut(s) 465
BspLI GGNNCC 4 cut(s) 105, 568, 802, 1003
BspMI ACCTGC 1 cut(s) 805
BspPI GGATC 5 cut(s) 78, 795, 808, 996, 1009
BspT104I TTCGAA 1 cut(s) 706
BsrDI GCAATG 1 cut(s) 753
BsrGI TGTACA 1 cut(s) 299
BsrI ACTGG 3 cut(s) 53, 570, 838
BssECI CCNNGG 3 cut(s) 242, 352, 459
BssMI GATC 5 cut(s) 70, 376, 498, 800, 1001
BssT1I CCWWGG 2 cut(s) 242, 352
Bst2UI CCWGG 2 cut(s) 309, 461
Bst4CI ACNGT 4 cut(s) 370, 863, 943, 1020
BstAUI TGTACA 1 cut(s) 299
BstBI TTCGAA 1 cut(s) 706
BstC8I GCNNGC 3 cut(s) 140, 188, 384
BstDEI CTNAG 3 cut(s) 323, 474, 1029
BstDSI CCRYGG 2 cut(s) 242, 352
BstF5I GGATG 2 cut(s) 458, 952
BstKTI GATC 5 cut(s) 73, 379, 501, 803, 1004
BstMAI GTCTC 1 cut(s) 836
BstMBI GATC 5 cut(s) 70, 376, 498, 800, 1001
BstNI CCWGG 2 cut(s) 309, 461
BstSCI CCNGG 2 cut(s) 307, 459
BstV1I GCAGC 2 cut(s) 65, 115
BstV2I GAAGAC 1 cut(s) 53
BstX2I RGATCY 3 cut(s) 70, 800, 1001
BstYI RGATCY 3 cut(s) 70, 800, 1001
Bsu36I CCTNAGG 1 cut(s) 1029
BsuRI GGCC 5 cut(s) 190, 351, 365, 884, 1092
BtgI CCRYGG 2 cut(s) 242, 352
BtgZI GCGATG 1 cut(s) 167
BtsCI GGATG 2 cut(s) 458, 952
BtsIMutI CAGTG 2 cut(s) 831, 1025
BveI ACCTGC 1 cut(s) 805
Cac8I GCNNGC 3 cut(s) 140, 188, 384
CciI TCATGA 1 cut(s) 465
Cfr13I GGNCC 1 cut(s) 189
Csp6I GTAC 5 cut(s) 234, 248, 300, 505, 1042
CviAII CATG 6 cut(s) 116, 208, 214, 243, 353, 466
CviQI GTAC 5 cut(s) 234, 248, 300, 505, 1042
DdeI CTNAG 3 cut(s) 323, 474, 1029
DpnI GATC 5 cut(s) 72, 378, 500, 802, 1003
DpnII GATC 5 cut(s) 70, 376, 498, 800, 1001
DraI TTTAAA 1 cut(s) 993
EaeI YGGCCR 3 cut(s) 349, 363, 882
Ecl136II GAGCTC 1 cut(s) 471
Eco130I CCWWGG 2 cut(s) 242, 352
Eco24I GRGCYC 1 cut(s) 473
Eco53kI GAGCTC 1 cut(s) 471
Eco57I CTGAAG 1 cut(s) 285
Eco81I CCTNAGG 1 cut(s) 1029
EcoICRI GAGCTC 1 cut(s) 471
EcoRII CCWGG 2 cut(s) 307, 459
EcoT14I CCWWGG 2 cut(s) 242, 352
EcoT38I GRGCYC 1 cut(s) 473
ErhI CCWWGG 2 cut(s) 242, 352
FaeI CATG 6 cut(s) 119, 211, 217, 246, 356, 469
FalI AAGNNNNNCTT 4 cut(s) 485, 517, 678, 710
FaqI GGGAC 3 cut(s) 185, 441, 542
FatI CATG 6 cut(s) 115, 207, 213, 242, 352, 465
FauI CCCGC 1 cut(s) 1069
FbaI TGATCA 1 cut(s) 376
Fnu4HI GCNGC 2 cut(s) 54, 129
FokI GGATG 2 cut(s) 465, 959
FriOI GRGCYC 1 cut(s) 473
Fsp4HI GCNGC 2 cut(s) 54, 129
FspBI CTAG 3 cut(s) 197, 585, 1099
GluI GCNGC 2 cut(s) 54, 129
GsuI CTGGAG 1 cut(s) 855
HaeIII GGCC 5 cut(s) 190, 351, 365, 884, 1092
HapII CCGG 3 cut(s) 65, 220, 798
Hin1II CATG 6 cut(s) 119, 211, 217, 246, 356, 469
HincII GTYRAC 1 cut(s) 939
HindII GTYRAC 1 cut(s) 939
HindIII AAGCTT 1 cut(s) 140
HinfI GANTC 6 cut(s) 442, 677, 736, 844, 932, 1072
HpaII CCGG 3 cut(s) 65, 220, 798
HphI GGTGA 3 cut(s) 23, 869, 1016
Hpy166II GTNNAC 4 cut(s) 81, 412, 775, 939
Hpy188I TCNGA 3 cut(s) 265, 422, 452
Hpy188III TCNNGA 5 cut(s) 65, 89, 220, 466, 1031
Hpy8I GTNNAC 4 cut(s) 81, 412, 775, 939
HpyAV CCTTC 2 cut(s) 260, 775
HpyCH4III ACNGT 4 cut(s) 370, 863, 943, 1020
HpyCH4IV ACGT 1 cut(s) 598
HpyCH4V TGCA 2 cut(s) 138, 903
HpyF3I CTNAG 3 cut(s) 323, 474, 1029
HpySE526I ACGT 1 cut(s) 598
Hsp92II CATG 6 cut(s) 119, 211, 217, 246, 356, 469
Kpn2I TCCGGA 2 cut(s) 64, 219
Ksp22I TGATCA 1 cut(s) 376
Kzo9I GATC 5 cut(s) 70, 376, 498, 800, 1001
Lsp1109I GCAGC 2 cut(s) 65, 115
LweI GCATC 1 cut(s) 456
MaeI CTAG 3 cut(s) 197, 585, 1099
MaeII ACGT 1 cut(s) 598
MaeIII GTNAC 4 cut(s) 14, 29, 857, 1022
MalI GATC 5 cut(s) 72, 378, 500, 802, 1003
MboI GATC 5 cut(s) 70, 376, 498, 800, 1001
MboII GAAGA 3 cut(s) 16, 53, 720
MflI RGATCY 3 cut(s) 70, 800, 1001
MhlI GDGCHC 1 cut(s) 473
MlsI TGGCCA 3 cut(s) 351, 365, 884
MluCI AATT 3 cut(s) 958, 981, 1083
MluNI TGGCCA 3 cut(s) 351, 365, 884
MlyI GAGTC 1 cut(s) 838
MnlI CCTC 6 cut(s) 61, 213, 581, 763, 1038, 1089
Mox20I TGGCCA 3 cut(s) 351, 365, 884
MroI TCCGGA 2 cut(s) 64, 219
MroXI GAANNNNTTC 1 cut(s) 432
MscI TGGCCA 3 cut(s) 351, 365, 884
MseI TTAA 7 cut(s) 288, 639, 824, 963, 992, 1037, 1086
MslI CAYNNNNRTG 1 cut(s) 212
Msp20I TGGCCA 3 cut(s) 351, 365, 884
MspA1I CMGCKG 1 cut(s) 382
MspI CCGG 3 cut(s) 65, 220, 798
MspR9I CCNGG 2 cut(s) 309, 461
MvaI CCWGG 2 cut(s) 309, 461
NcoI CCATGG 2 cut(s) 242, 352
NdeII GATC 5 cut(s) 70, 376, 498, 800, 1001
NlaIII CATG 6 cut(s) 119, 211, 217, 246, 356, 469
NlaIV GGNNCC 4 cut(s) 105, 568, 802, 1003
NmuCI GTSAC 4 cut(s) 14, 29, 857, 1022
NspV TTCGAA 1 cut(s) 706
PagI TCATGA 1 cut(s) 465
PdmI GAANNNNTTC 1 cut(s) 432
PfeI GAWTC 5 cut(s) 442, 677, 736, 932, 1072
PflMI CCANNNNNTGG 1 cut(s) 1088
PkrI GCNGC 2 cut(s) 55, 130
PleI GAGTC 1 cut(s) 838
PpsI GAGTC 1 cut(s) 838
PshBI ATTAAT 2 cut(s) 639, 1086
Psp124BI GAGCTC 1 cut(s) 473
Psp1406I AACGTT 1 cut(s) 598
Psp6I CCWGG 2 cut(s) 307, 459
PspGI CCWGG 2 cut(s) 307, 459
PspN4I GGNNCC 4 cut(s) 105, 568, 802, 1003
PspPI GGNCC 1 cut(s) 189
PsuI RGATCY 3 cut(s) 70, 800, 1001
PvuII CAGCTG 1 cut(s) 382
RsaI GTAC 5 cut(s) 235, 249, 301, 506, 1043
RsaNI GTAC 5 cut(s) 234, 248, 300, 505, 1042
RseI CAYNNNNRTG 1 cut(s) 212
SacI GAGCTC 1 cut(s) 473
SaqAI TTAA 7 cut(s) 288, 639, 824, 963, 992, 1037, 1086
SatI GCNGC 2 cut(s) 54, 129
Sau3AI GATC 5 cut(s) 70, 376, 498, 800, 1001
Sau96I GGNCC 1 cut(s) 189
ScaI AGTACT 1 cut(s) 235
SchI GAGTC 1 cut(s) 838
ScrFI CCNGG 2 cut(s) 309, 461
SduI GDGCHC 1 cut(s) 473
SfaNI GCATC 1 cut(s) 456
SfuI TTCGAA 1 cut(s) 706
SmiMI CAYNNNNRTG 1 cut(s) 212
Sse9I AATT 3 cut(s) 958, 981, 1083
SsiI CCGC 1 cut(s) 1062
SspI AATATT 1 cut(s) 286
SspMI CTAG 3 cut(s) 197, 585, 1099
SstI GAGCTC 1 cut(s) 473
StyD4I CCNGG 2 cut(s) 307, 459
StyI CCWWGG 2 cut(s) 242, 352
TaaI ACNGT 4 cut(s) 370, 863, 943, 1020
TaiI ACGT 1 cut(s) 601
TaqI TCGA 6 cut(s) 611, 635, 706, 768, 789, 819
TasI AATT 3 cut(s) 958, 981, 1083
TatI WGTACW 2 cut(s) 233, 299
TfiI GAWTC 5 cut(s) 442, 677, 736, 932, 1072
Tru1I TTAA 7 cut(s) 288, 639, 824, 963, 992, 1037, 1086
Tru9I TTAA 7 cut(s) 288, 639, 824, 963, 992, 1037, 1086
TscAI CASTG 2 cut(s) 838, 1025
TseFI GTSAC 4 cut(s) 14, 29, 857, 1022
TseI GCWGC 2 cut(s) 53, 128
Tsp45I GTSAC 4 cut(s) 14, 29, 857, 1022
TspDTI ATGAA 4 cut(s) 17, 110, 654, 963
TspGWI ACGGA 1 cut(s) 739
TspRI CASTG 2 cut(s) 838, 1025
Van91I CCANNNNNTGG 1 cut(s) 1088
VspI ATTAAT 2 cut(s) 639, 1086
XapI RAATTY 2 cut(s) 958, 981
XmnI GAANNNNTTC 1 cut(s) 432
XspI CTAG 3 cut(s) 197, 585, 1099
ZrmI AGTACT 1 cut(s) 235
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.