MD10G1043600.v1.1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr10
OG0000064
Physical Location & Seq
Reverse (-)
5877311 .. 5883903
6593 bp
Loading structure...
UTR
Exon/CDS
Intron
MD10G1043600.v1.1.491

Sequence Viewer

Length: 1344 bp
ATGGCAGAGCATCCATCCATAAGGGAGGGTGAGGGGGAGGATGGATCCAAGCAGTCAAATGGAGGGTCGGCATTATGCACTACTCCATTACGGCATTGCAGAAACTGGAAACTTACTGCTCAAAGCTCTTTGATTTCATGGAGGATCATGCCTGTCAGCTTCAGCACTACCGGATGGGCAAGCCTTCCTGCACTCATCTTTCTCATTCTCGACAAGTTGCCGGAACCCATAGACCATGTTCGTTTTGCTGCCGTTTGCAAGGACTGGCGTTCTCTTTCCAAACTCTATAATCTTGCAACAAACCGGTGGCGTCATTTTCTTCCCATGCTCTTGATCCCCAACGAAAATTGCCCACAAGCTGACCAAAGACTCGTGTACAGCATTTCTGAAGGAAGGATCTACAACCATGCTCAGTTACAAGTGCCCTTTAGTATGAGGGCTTGTGGCTCTAGCCATGGATGGCTGGCCACAGTAGATCGCGCAGACACCACAGTAGATTGCGCAGACCAAAGACTCGTCATAGCACTCAGGAACCCATTCAGACAAGCATCGCCAGTTATTCGTCTGCCTCCCATAGATGTCTTCATCCCCAAATGCGTAGCAAGCTACCATGAGCATTTTGTCCGTAAGGTTATCTTGTCCGGTGATCCCTCTCTGAATCCGGACAACTATGTTGTCGTAGCAATTTACGCTTCGGATTCCAGGTTGGCTGTCTTCAAAGCAGGCCAGAAGTCTTGGCATTTGATCGTAAAGTCCTTTGAAACTGCTGATGTTATATTTTATAGAGGCCAAGTCTACGCGGCTAGTATGCGGGGAAGAGTTAGCTTACTGGATATTGATAACCCTGGTGCACAGCCGCCAGAACTGAAGCTACTCACGCCTAAAGAGCCGTTTGAAAGATATAGCGGTAATGGATATCTTGTGGAATCAGCTAAGGGCGACCTATTTCACATCCTAAGATATTGTTGGATGAGGGAAGTTGCGCCTGACAAGTGTTTCAGGTTTCGGACTAAGGGATTTCTGGTCTACAAGTGGGTTTTCAACGATGAAGAAGATGGATGCATTGCGCACTGGGTTGAGGTAAAAAGCCTTGGAGATGAGGCTGTCTTCCTGGGAGACAATCATTCAGTCTCTGTTTTGGCTTCAAACTTTGCCGGATGCTGCCCGAATTCGATATATTACACCGATGATTTTGTTTCAGGCTGTCCGTTGTCCGACGGTGATGAACCATGTGATATGGGCATCTTCAACTTAGAGGATGGAACCATCGTGCAACACTACTCTCGACACACCAATACTCCAAGAGCGATTTGGGTTGTGCCGCGGTTTAATGGACTGTGTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

448

Amino Acids

50.34

Weight (kDa)

6.7

Isoelectric Point (pI)

32.9

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 125 - 417 7.3e-49 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 502, 1068
AccI GTMKAC 2 cut(s) 795, 1026
AccII CGCG 3 cut(s) 480, 800, 1324
AccIII TCCGGA 1 cut(s) 661
AciI CCGC 6 cut(s) 800, 811, 857, 906, 1322, 1324
AclWI GGATC 6 cut(s) 39, 52, 152, 328, 404, 641
AcoI YGGCCR 1 cut(s) 465
AcsI RAATTY 1 cut(s) 1168
AcuI CTGAAG 3 cut(s) 145, 408, 887
AcyI GRCGYC 1 cut(s) 310
AfaI GTAC 1 cut(s) 377
AgeI ACCGGT 1 cut(s) 303
AgsI TTSAA 6 cut(s) 718, 761, 896, 1042, 1146, 1249
AjnI CCWGG 3 cut(s) 701, 844, 1110
AluBI AGCT 7 cut(s) 126, 159, 359, 606, 825, 871, 932
AluI AGCT 7 cut(s) 126, 159, 359, 606, 825, 871, 932
Alw21I GWGCWC 1 cut(s) 853
Alw26I GTCTC 2 cut(s) 1110, 1135
Alw44I GTGCAC 1 cut(s) 849
AlwI GGATC 6 cut(s) 39, 52, 152, 328, 404, 641
AlwNI CAGNNNCTG 2 cut(s) 105, 1133
Aor13HI TCCGGA 1 cut(s) 661
AoxI GGCC 3 cut(s) 465, 724, 787
ApaLI GTGCAC 1 cut(s) 849
ApeKI GCWGC 2 cut(s) 248, 1161
ApoI RAATTY 1 cut(s) 1168
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
AsiGI ACCGGT 1 cut(s) 303
Asp700I GAANNNNTTC 1 cut(s) 536
AspLEI GCGC 4 cut(s) 482, 503, 985, 1069
AsuHPI GGTGA 3 cut(s) 41, 656, 1232
BaeGI GKGCMC 2 cut(s) 426, 853
BalI TGGCCA 1 cut(s) 467
BamHI GGATCC 1 cut(s) 44
BauI CACGAG 1 cut(s) 371
BbsI GAAGAC 3 cut(s) 574, 706, 1099
Bbv12I GWGCWC 1 cut(s) 853
BbvI GCAGC 2 cut(s) 235, 1148
BccI CCATC 7 cut(s) 22, 35, 168, 453, 1049, 1253, 1274
BceAI ACGGC 3 cut(s) 107, 236, 874
BciT130I CCWGG 3 cut(s) 703, 846, 1112
BcoDI GTCTC 2 cut(s) 1110, 1135
BfaI CTAG 2 cut(s) 450, 804
BisI GCNGC 5 cut(s) 249, 801, 857, 1162, 1322
BlsI GCNGC 5 cut(s) 250, 802, 858, 1163, 1323
Bme1390I CCNGG 3 cut(s) 703, 846, 1112
BmiI GGNNCC 4 cut(s) 46, 225, 533, 1264
BmrFI CCNGG 3 cut(s) 703, 846, 1112
BmrI ACTGGG 1 cut(s) 1081
BmsI GCATC 5 cut(s) 19, 557, 1049, 1148, 1251
BmuI ACTGGG 1 cut(s) 1081
BpiI GAAGAC 3 cut(s) 574, 706, 1099
Bpu10I CCTNAGC 1 cut(s) 933
BsaHI GRCGYC 1 cut(s) 310
BsaJI CCNNGG 5 cut(s) 454, 844, 1090, 1111, 1322
BsaWI WCCGGW 4 cut(s) 170, 303, 641, 661
BsaXI ACNNNNNCTCC 2 cut(s) 1282, 1312
Bse118I RCCGGY 1 cut(s) 303
Bse1I ACTGG 5 cut(s) 110, 269, 554, 834, 1076
Bse3DI GCAATG 2 cut(s) 94, 1062
BseAI TCCGGA 1 cut(s) 661
BseBI CCWGG 3 cut(s) 703, 846, 1112
BseDI CCNNGG 5 cut(s) 454, 844, 1090, 1111, 1322
BseMI GCAATG 2 cut(s) 94, 1062
BseMII CTCAG 2 cut(s) 425, 541
BseNI ACTGG 5 cut(s) 110, 269, 554, 834, 1076
BseSI GKGCMC 2 cut(s) 426, 853
BseXI GCAGC 2 cut(s) 235, 1148
BsgI GTGCAG 1 cut(s) 174
Bsh1236I CGCG 3 cut(s) 480, 800, 1324
BshFI GGCC 3 cut(s) 467, 726, 789
BshTI ACCGGT 1 cut(s) 303
BsiHKAI GWGCWC 1 cut(s) 853
BsiSI CCGG 6 cut(s) 171, 221, 304, 642, 662, 1155
BsmAI GTCTC 2 cut(s) 1110, 1135
BsnI GGCC 3 cut(s) 467, 726, 789
Bsp1286I GDGCHC 2 cut(s) 426, 853
Bsp13I TCCGGA 1 cut(s) 661
Bsp1407I TGTACA 1 cut(s) 375
Bsp143I GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
Bsp19I CCATGG 1 cut(s) 454
BspACI CCGC 6 cut(s) 800, 811, 857, 906, 1322, 1324
BspANI GGCC 3 cut(s) 467, 726, 789
BspCNI CTCAG 2 cut(s) 424, 540
BspEI TCCGGA 1 cut(s) 661
BspFNI CGCG 3 cut(s) 480, 800, 1324
BspLI GGNNCC 4 cut(s) 46, 225, 533, 1264
BspPI GGATC 6 cut(s) 39, 52, 152, 328, 404, 641
BsrDI GCAATG 2 cut(s) 94, 1062
BsrFI RCCGGY 1 cut(s) 303
BsrGI TGTACA 1 cut(s) 375
BsrI ACTGG 5 cut(s) 110, 269, 554, 834, 1076
BssAI RCCGGY 1 cut(s) 303
BssECI CCNNGG 5 cut(s) 454, 844, 1090, 1111, 1322
BssMI GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
BssNI GRCGYC 1 cut(s) 310
BssSI CACGAG 1 cut(s) 371
BssT1I CCWWGG 2 cut(s) 454, 1090
Bst2BI CACGAG 1 cut(s) 371
Bst2UI CCWGG 3 cut(s) 703, 846, 1112
Bst4CI ACNGT 4 cut(s) 472, 493, 1220, 1338
Bst6I CTCTTC 1 cut(s) 811
BstACI GRCGYC 1 cut(s) 310
BstAUI TGTACA 1 cut(s) 375
BstC8I GCNNGC 4 cut(s) 181, 465, 604, 724
BstDEI CTNAG 6 cut(s) 411, 527, 933, 956, 1011, 1252
BstDSI CCRYGG 2 cut(s) 454, 1322
BstFNI CGCG 3 cut(s) 480, 800, 1324
BstHHI GCGC 4 cut(s) 482, 503, 985, 1069
BstKTI GATC 7 cut(s) 47, 147, 336, 399, 478, 649, 747
BstMAI GTCTC 2 cut(s) 1110, 1135
BstMBI GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
BstMWI GCNNNNNNNGC 4 cut(s) 603, 689, 877, 886
BstNI CCWGG 3 cut(s) 703, 846, 1112
BstSCI CCNGG 3 cut(s) 701, 844, 1110
BstSLI GKGCMC 2 cut(s) 426, 853
BstUI CGCG 3 cut(s) 480, 800, 1324
BstV1I GCAGC 2 cut(s) 235, 1148
BstV2I GAAGAC 3 cut(s) 574, 706, 1099
BstX2I RGATCY 2 cut(s) 44, 396
BstYI RGATCY 2 cut(s) 44, 396
BsuRI GGCC 3 cut(s) 467, 726, 789
BtgI CCRYGG 2 cut(s) 454, 1322
BtgZI GCGATG 1 cut(s) 534
BtsIMutI CAGTG 1 cut(s) 1069
Cac8I GCNNGC 4 cut(s) 181, 465, 604, 724
CaiI CAGNNNCTG 2 cut(s) 105, 1133
CfoI GCGC 4 cut(s) 482, 503, 985, 1069
Cfr10I RCCGGY 1 cut(s) 303
Cfr42I CCGCGG 1 cut(s) 1325
CseI GACGC 1 cut(s) 299
Csp6I GTAC 1 cut(s) 376
CspAI ACCGGT 1 cut(s) 303
CviAII CATG 8 cut(s) 138, 148, 236, 325, 407, 455, 611, 1230
CviQI GTAC 1 cut(s) 376
DdeI CTNAG 6 cut(s) 411, 527, 933, 956, 1011, 1252
DpnI GATC 7 cut(s) 46, 146, 335, 398, 477, 648, 746
DpnII GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
EaeI YGGCCR 1 cut(s) 465
Eam1104I CTCTTC 1 cut(s) 811
EarI CTCTTC 1 cut(s) 811
Eco130I CCWWGG 2 cut(s) 454, 1090
Eco32I GATATC 1 cut(s) 917
Eco57I CTGAAG 3 cut(s) 145, 408, 887
EcoRI GAATTC 1 cut(s) 1168
EcoRII CCWGG 3 cut(s) 701, 844, 1110
EcoRV GATATC 1 cut(s) 917
EcoT14I CCWWGG 2 cut(s) 454, 1090
EcoT22I ATGCAT 1 cut(s) 1064
ErhI CCWWGG 2 cut(s) 454, 1090
FaeI CATG 8 cut(s) 141, 151, 239, 328, 410, 458, 614, 1233
FalI AAGNNNNNCTT 2 cut(s) 620, 652
FatI CATG 8 cut(s) 137, 147, 235, 324, 406, 454, 610, 1229
FauI CCCGC 1 cut(s) 804
FblI GTMKAC 2 cut(s) 795, 1026
Fnu4HI GCNGC 5 cut(s) 249, 801, 857, 1162, 1322
FokI GGATG 9 cut(s) 53, 186, 471, 572, 938, 982, 1071, 1170, 1271
Fsp4HI GCNGC 5 cut(s) 249, 801, 857, 1162, 1322
FspBI CTAG 2 cut(s) 450, 804
FspI TGCGCA 2 cut(s) 502, 1068
GlaI GCGC 4 cut(s) 481, 502, 984, 1068
GluI GCNGC 5 cut(s) 249, 801, 857, 1162, 1322
HaeIII GGCC 3 cut(s) 467, 726, 789
HapII CCGG 6 cut(s) 171, 221, 304, 642, 662, 1155
HgaI GACGC 1 cut(s) 299
HhaI GCGC 4 cut(s) 482, 503, 985, 1069
Hin1I GRCGYC 1 cut(s) 310
Hin1II CATG 8 cut(s) 141, 151, 239, 328, 410, 458, 614, 1233
Hin6I GCGC 4 cut(s) 480, 501, 983, 1067
HinP1I GCGC 4 cut(s) 480, 501, 983, 1067
HinfI GANTC 5 cut(s) 369, 513, 658, 698, 926
HpaII CCGG 6 cut(s) 171, 221, 304, 642, 662, 1155
HphI GGTGA 3 cut(s) 41, 656, 1232
Hpy166II GTNNAC 4 cut(s) 376, 796, 851, 1027
Hpy188I TCNGA 6 cut(s) 388, 542, 657, 697, 1008, 1216
Hpy188III TCNNGA 5 cut(s) 209, 331, 529, 662, 1284
Hpy8I GTNNAC 4 cut(s) 376, 796, 851, 1027
Hpy99I CGWCG 1 cut(s) 1220
HpyAV CCTTC 3 cut(s) 194, 383, 387
HpyCH4III ACNGT 4 cut(s) 472, 493, 1220, 1338
HpyCH4V TGCA 8 cut(s) 78, 99, 191, 258, 296, 851, 1062, 1273
HpyF10VI GCNNNNNNNGC 4 cut(s) 603, 689, 877, 886
HpyF3I CTNAG 6 cut(s) 411, 527, 933, 956, 1011, 1252
Hsp92I GRCGYC 1 cut(s) 310
Hsp92II CATG 8 cut(s) 141, 151, 239, 328, 410, 458, 614, 1233
HspAI GCGC 4 cut(s) 480, 501, 983, 1067
Kpn2I TCCGGA 1 cut(s) 661
KspI CCGCGG 1 cut(s) 1325
Kzo9I GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
Lsp1109I GCAGC 2 cut(s) 235, 1148
LweI GCATC 5 cut(s) 19, 557, 1049, 1148, 1251
MaeI CTAG 2 cut(s) 450, 804
MaeIII GTNAC 1 cut(s) 414
MalI GATC 7 cut(s) 46, 146, 335, 398, 477, 648, 746
MboI GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
MboII GAAGA 8 cut(s) 311, 574, 706, 828, 1061, 1064, 1099, 1237
MflI RGATCY 2 cut(s) 44, 396
MhlI GDGCHC 2 cut(s) 426, 853
MlsI TGGCCA 1 cut(s) 467
MluCI AATT 3 cut(s) 346, 684, 1168
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 2 cut(s) 363, 507
MmeI TCCRAC 2 cut(s) 947, 1239
Mox20I TGGCCA 1 cut(s) 467
Mph1103I ATGCAT 1 cut(s) 1064
MroI TCCGGA 1 cut(s) 661
MroXI GAANNNNTTC 1 cut(s) 536
MscI TGGCCA 1 cut(s) 467
MseI TTAA 2 cut(s) 1329, 1342
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 1 cut(s) 1324
MspI CCGG 6 cut(s) 171, 221, 304, 642, 662, 1155
MspR9I CCNGG 3 cut(s) 703, 846, 1112
MvaI CCWGG 3 cut(s) 703, 846, 1112
MvnI CGCG 3 cut(s) 480, 800, 1324
MwoI GCNNNNNNNGC 4 cut(s) 603, 689, 877, 886
NcoI CCATGG 1 cut(s) 454
NdeII GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
NlaIII CATG 8 cut(s) 141, 151, 239, 328, 410, 458, 614, 1233
NlaIV GGNNCC 4 cut(s) 46, 225, 533, 1264
NsbI TGCGCA 2 cut(s) 502, 1068
NsiI ATGCAT 1 cut(s) 1064
PdmI GAANNNNTTC 1 cut(s) 536
PfeI GAWTC 3 cut(s) 658, 698, 926
PinAI ACCGGT 1 cut(s) 303
PkrI GCNGC 5 cut(s) 250, 802, 858, 1163, 1323
PleI GAGTC 2 cut(s) 363, 507
PpsI GAGTC 2 cut(s) 363, 507
Psp6I CCWGG 3 cut(s) 701, 844, 1110
PspGI CCWGG 3 cut(s) 701, 844, 1110
PspN4I GGNNCC 4 cut(s) 46, 225, 533, 1264
PsrI GAACNNNNNNTAC 2 cut(s) 855, 887
PstNI CAGNNNCTG 2 cut(s) 105, 1133
PsuI RGATCY 2 cut(s) 44, 396
RsaI GTAC 1 cut(s) 377
RsaNI GTAC 1 cut(s) 376
SacII CCGCGG 1 cut(s) 1325
SaqAI TTAA 2 cut(s) 1329, 1342
SatI GCNGC 5 cut(s) 249, 801, 857, 1162, 1322
Sau3AI GATC 7 cut(s) 44, 144, 333, 396, 475, 646, 744
SchI GAGTC 2 cut(s) 363, 507
ScrFI CCNGG 3 cut(s) 703, 846, 1112
SduI GDGCHC 2 cut(s) 426, 853
SfaNI GCATC 5 cut(s) 19, 557, 1049, 1148, 1251
Sfr303I CCGCGG 1 cut(s) 1325
SgrBI CCGCGG 1 cut(s) 1325
Sse9I AATT 3 cut(s) 346, 684, 1168
SsiI CCGC 6 cut(s) 800, 811, 857, 906, 1322, 1324
SspMI CTAG 2 cut(s) 450, 804
StyD4I CCNGG 3 cut(s) 701, 844, 1110
StyI CCWWGG 2 cut(s) 454, 1090
TaaI ACNGT 4 cut(s) 472, 493, 1220, 1338
TaqI TCGA 3 cut(s) 210, 1172, 1285
TasI AATT 3 cut(s) 346, 684, 1168
TatI WGTACW 1 cut(s) 375
TauI GCSGC 3 cut(s) 803, 859, 1324
TfiI GAWTC 3 cut(s) 658, 698, 926
Tru1I TTAA 2 cut(s) 1329, 1342
Tru9I TTAA 2 cut(s) 1329, 1342
TscAI CASTG 1 cut(s) 1076
TseI GCWGC 2 cut(s) 248, 1161
TspDTI ATGAA 4 cut(s) 126, 574, 1062, 1239
TspGWI ACGGA 2 cut(s) 614, 1197
TspRI CASTG 1 cut(s) 1076
VneI GTGCAC 1 cut(s) 849
XapI RAATTY 1 cut(s) 1168
XcmI CCANNNNNNNNNTGG 1 cut(s) 1308
XmiI GTMKAC 2 cut(s) 795, 1026
XmnI GAANNNNTTC 1 cut(s) 536
XspI CTAG 2 cut(s) 450, 804
Zsp2I ATGCAT 1 cut(s) 1064
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.