Prupe.5G169100_v2.0.a1

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
OG0000064
Physical Location & Seq
Reverse (-)
14525217 .. 14527129
1913 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G169100.1

Sequence Viewer

Length: 1368 bp
ATGTACCCTAATAATAAGAAGCGTCGTTGTGGGAACATGGCCGCTGGTGTTGCCTTCAAATACTACAGTTGCAGTAGGTACATATCATCACCAGAATGGGCAAGTCTTCCTCTGCTGCCTGTGTTTTTGGTTCTAGATAATTTGTTTGAGCCCATTGACCATGTTTCTTTTGCTGCCGTCTGCAAGCAATGGCGTTCTCTTGCAAAAGACTATAATCAAGCAACACAGCGGTGGCGGCATAACAACCTACTTCCCATGCTCTTGATCCCTAATGAATATGAATGCCAAGGCGACGGCGGCAAGAATAGCCGCCTCCTAACGAAAACGAACCACCGAAAAGCATTATACAGCATTGCTGAAGGCAAAATCTACAACAATATTGGATTGGAAGTGCCTTTTAAAAAGAGGTCTTGTGGGTCTAGCCACGGTTGGTTTGCCACAGTAGAATCCGTCACAGACCAAGGTCCGATTATAGCACTCCGGGACCCTTTCAGAAATCCGGCATCGCCCATTCTTCTCCCTCTCTTGGATGTCATACCCAAGAAACGTGACAAATACTTCCACGAATTCAATGTGAGAAAGGTCATCTTCTCTGCTGACCCTGCTTTGAATCCAGATAACTATGTGGTTGTAGCACTGTTACGTAAAGCTAATCATTTTGTGGGTATTTATGATGAATTTGCTTTCATTCATATGAAAAGAGGCCTAAGCCAAAAACGTTGGACTTGGATTAAGCCCCCACTTCCGGTCACTGATGTTATATCTTACCAAACCCAAGTCCACCTACTTGGACATCAGGGAGAGATTTGGTCATTAGATGTCAGCCCTTATACTTCAAGAATACGACGACTAAAGCTGCTTACACATCGGGACGCAGGCTTCCACCGTTATAAAGCTACAAGATATCTTGTAGAATCAACCAAGGGAGACTTAATGCATATCGAAAGAGTTTGTAAACAAACACAAGGGGCCTACAAGAATGTTATGACTGAAAGCTTTAGGGTTTACAAAGTGGTGTTCGACGACGAAGACGGATCTGTTTTACAACATGTTGAGGTAAAAAGCATTGGAGATGATGCCTTTTTCATAGGTGACAATCATTCCGTCTCTGTTTTGGCTTCCAACTTTCATGGATGCCAGTCAAATTCCATATATTATACCCATGATTTCTCATCGTCGTCTTTTGTTTACGGAGACCATATCCAATATGATACGCTATATGACGACATGCCATGTCGCGATATGGGTATTTTTAATTTAGAGAGCGGAACCATCACACAACATTTCTCCTTAGATCCTTATTCTGATTTGCAGGGTTATATACCGCCTGCAGTCTGGGTTGTACCCCAGTTTAATGGACTCCGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

456

Amino Acids

52.2

Weight (kDa)

8.8

Isoelectric Point (pI)

44.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 891
AccBSI CCGCTC 1 cut(s) 1266
AccII CGCG 1 cut(s) 1239
AciI CCGC 8 cut(s) 42, 229, 235, 297, 310, 1266, 1325, 1363
AclI AACGTT 1 cut(s) 718
AclWI GGATC 3 cut(s) 259, 1042, 1289
AcoI YGGCCR 1 cut(s) 39
AcsI RAATTY 3 cut(s) 566, 677, 1144
AcuI CTGAAG 1 cut(s) 378
AfaI GTAC 3 cut(s) 5, 80, 1344
AfiI CCNNNNNNNGG 2 cut(s) 526, 745
AflIII ACRYGT 1 cut(s) 1048
AgsI TTSAA 4 cut(s) 58, 571, 610, 837
AleI CACNNNNGTG 1 cut(s) 229
AluBI AGCT 4 cut(s) 650, 856, 896, 996
AluI AGCT 4 cut(s) 650, 856, 896, 996
Alw26I GTCTC 3 cut(s) 921, 1111, 1188
AlwI GGATC 3 cut(s) 259, 1042, 1289
AoxI GGCC 3 cut(s) 39, 703, 969
ApeKI GCWGC 3 cut(s) 115, 173, 856
ApoI RAATTY 3 cut(s) 566, 677, 1144
AspS9I GGNCC 3 cut(s) 464, 484, 969
AsuC2I CCSGG 1 cut(s) 482
AsuHPI GGTGA 2 cut(s) 81, 1103
AvaII GGWCC 2 cut(s) 464, 484
BanII GRGCYC 1 cut(s) 153
BbsI GAAGAC 2 cut(s) 98, 1035
BbvI GCAGC 3 cut(s) 102, 160, 843
BccI CCATC 1 cut(s) 1280
BceAI ACGGC 2 cut(s) 161, 310
BcnI CCSGG 1 cut(s) 482
BcoDI GTCTC 3 cut(s) 921, 1111, 1188
BfaI CTAG 3 cut(s) 134, 420, 1366
BfmI CTRYAG 2 cut(s) 64, 1329
BisI GCNGC 7 cut(s) 42, 116, 174, 236, 298, 310, 857
BlsI GCNGC 7 cut(s) 43, 117, 175, 237, 299, 311, 858
Bme1390I CCNGG 1 cut(s) 482
Bme18I GGWCC 2 cut(s) 464, 484
BmgT120I GGNCC 3 cut(s) 464, 484, 969
BmiI GGNNCC 4 cut(s) 485, 486, 970, 1270
BmrFI CCNGG 1 cut(s) 482
BmrI ACTGGG 1 cut(s) 1342
BmsI GCATC 3 cut(s) 512, 1066, 1124
BmuI ACTGGG 1 cut(s) 1342
BoxI GACNNNNGTC 1 cut(s) 462
BpiI GAAGAC 2 cut(s) 98, 1035
Bpu10I CCTNAGC 1 cut(s) 707
BpuMI CCSGG 1 cut(s) 482
BsaAI YACGTR 1 cut(s) 644
BsaI GGTCTC 1 cut(s) 1188
BsaJI CCNNGG 4 cut(s) 286, 424, 460, 921
BsaWI WCCGGW 1 cut(s) 745
Bsc4I CCNNNNNNNGG 2 cut(s) 526, 745
Bse1I ACTGG 2 cut(s) 1138, 1348
Bse3DI GCAATG 2 cut(s) 194, 351
BseDI CCNNGG 4 cut(s) 286, 424, 460, 921
BseGI GGATG 2 cut(s) 535, 1139
BseLI CCNNNNNNNGG 2 cut(s) 526, 745
BseMI GCAATG 2 cut(s) 194, 351
BseNI ACTGG 2 cut(s) 1138, 1348
BseXI GCAGC 3 cut(s) 102, 160, 843
Bsh1236I CGCG 1 cut(s) 1239
BshFI GGCC 3 cut(s) 41, 705, 971
BsiSI CCGG 3 cut(s) 481, 500, 746
BslFI GGGAC 2 cut(s) 497, 884
BslI CCNNNNNNNGG 2 cut(s) 526, 745
BsmAI GTCTC 3 cut(s) 921, 1111, 1188
BsmBI CGTCTC 1 cut(s) 1111
BsmFI GGGAC 2 cut(s) 497, 884
BsmI GAATGC 1 cut(s) 287
BsnI GGCC 3 cut(s) 41, 705, 971
Bso31I GGTCTC 1 cut(s) 1188
Bsp1286I GDGCHC 1 cut(s) 153
Bsp143I GATC 3 cut(s) 264, 1034, 1294
Bsp68I TCGCGA 1 cut(s) 1239
BspACI CCGC 8 cut(s) 42, 229, 235, 297, 310, 1266, 1325, 1363
BspANI GGCC 3 cut(s) 41, 705, 971
BspFNI CGCG 1 cut(s) 1239
BspLI GGNNCC 4 cut(s) 485, 486, 970, 1270
BspMAI CTGCAG 1 cut(s) 1333
BspPI GGATC 3 cut(s) 259, 1042, 1289
BspTNI GGTCTC 1 cut(s) 1188
BsrBI CCGCTC 1 cut(s) 1266
BsrDI GCAATG 2 cut(s) 194, 351
BsrI ACTGG 2 cut(s) 1138, 1348
BssECI CCNNGG 4 cut(s) 286, 424, 460, 921
BssMI GATC 3 cut(s) 264, 1034, 1294
BssT1I CCWWGG 3 cut(s) 286, 460, 921
Bst4CI ACNGT 5 cut(s) 68, 428, 442, 639, 887
BstBAI YACGTR 1 cut(s) 644
BstC8I GCNNGC 3 cut(s) 185, 877, 1329
BstDEI CTNAG 2 cut(s) 707, 1291
BstDSI CCRYGG 1 cut(s) 424
BstF5I GGATG 2 cut(s) 535, 1139
BstFNI CGCG 1 cut(s) 1239
BstKTI GATC 3 cut(s) 267, 1037, 1297
BstMAI GTCTC 3 cut(s) 921, 1111, 1188
BstMBI GATC 3 cut(s) 264, 1034, 1294
BstMWI GCNNNNNNNGC 5 cut(s) 50, 235, 297, 306, 602
BstNSI RCATGY 2 cut(s) 1052, 1231
BstPAI GACNNNNGTC 1 cut(s) 462
BstSCI CCNGG 1 cut(s) 480
BstSFI CTRYAG 2 cut(s) 64, 1329
BstSNI TACGTA 1 cut(s) 644
BstUI CGCG 1 cut(s) 1239
BstV1I GCAGC 3 cut(s) 102, 160, 843
BstV2I GAAGAC 2 cut(s) 98, 1035
BstX2I RGATCY 2 cut(s) 1034, 1294
BstXI CCANNNNNNTGG 2 cut(s) 788, 1355
BstYI RGATCY 2 cut(s) 1034, 1294
BsuRI GGCC 3 cut(s) 41, 705, 971
BtgI CCRYGG 1 cut(s) 424
BtgZI GCGATG 1 cut(s) 489
BtsCI GGATG 2 cut(s) 535, 1139
BtsIMutI CAGTG 2 cut(s) 635, 750
BtuMI TCGCGA 1 cut(s) 1239
Cac8I GCNNGC 3 cut(s) 185, 877, 1329
Cfr13I GGNCC 3 cut(s) 464, 484, 969
CseI GACGC 2 cut(s) 11, 881
Csp6I GTAC 3 cut(s) 4, 79, 1343
CviAII CATG 8 cut(s) 37, 161, 256, 1049, 1130, 1163, 1228, 1233
CviQI GTAC 3 cut(s) 4, 79, 1343
DdeI CTNAG 2 cut(s) 707, 1291
DpnI GATC 3 cut(s) 266, 1036, 1296
DpnII GATC 3 cut(s) 264, 1034, 1294
DraI TTTAAA 1 cut(s) 400
EaeI YGGCCR 1 cut(s) 39
Eco105I TACGTA 1 cut(s) 644
Eco130I CCWWGG 3 cut(s) 286, 460, 921
Eco147I AGGCCT 1 cut(s) 705
Eco24I GRGCYC 1 cut(s) 153
Eco31I GGTCTC 1 cut(s) 1188
Eco32I GATATC 1 cut(s) 905
Eco47I GGWCC 2 cut(s) 464, 484
Eco57I CTGAAG 1 cut(s) 378
EcoO109I RGGNCCY 2 cut(s) 484, 969
EcoRI GAATTC 1 cut(s) 566
EcoRV GATATC 1 cut(s) 905
EcoT14I CCWWGG 3 cut(s) 286, 460, 921
EcoT22I ATGCAT 1 cut(s) 939
EcoT38I GRGCYC 1 cut(s) 153
ErhI CCWWGG 3 cut(s) 286, 460, 921
Esp3I CGTCTC 1 cut(s) 1111
FaeI CATG 8 cut(s) 40, 164, 259, 1052, 1133, 1166, 1231, 1236
FalI AAGNNNNNCTT 4 cut(s) 572, 604, 914, 946
FaqI GGGAC 2 cut(s) 497, 884
FatI CATG 8 cut(s) 36, 160, 255, 1048, 1129, 1162, 1227, 1232
FauNDI CATATG 1 cut(s) 693
Fnu4HI GCNGC 7 cut(s) 42, 116, 174, 236, 298, 310, 857
FokI GGATG 2 cut(s) 542, 1146
FriOI GRGCYC 1 cut(s) 153
Fsp4HI GCNGC 7 cut(s) 42, 116, 174, 236, 298, 310, 857
FspBI CTAG 3 cut(s) 134, 420, 1366
GluI GCNGC 7 cut(s) 42, 116, 174, 236, 298, 310, 857
HaeIII GGCC 3 cut(s) 41, 705, 971
HapII CCGG 3 cut(s) 481, 500, 746
HgaI GACGC 2 cut(s) 11, 881
Hin1II CATG 8 cut(s) 40, 164, 259, 1052, 1133, 1166, 1231, 1236
HindIII AAGCTT 1 cut(s) 994
HinfI GANTC 4 cut(s) 446, 610, 914, 1359
HpaII CCGG 3 cut(s) 481, 500, 746
HphI GGTGA 2 cut(s) 81, 1103
Hpy166II GTNNAC 4 cut(s) 781, 956, 1006, 1189
Hpy188I TCNGA 3 cut(s) 468, 494, 1306
Hpy188III TCNNGA 6 cut(s) 134, 262, 614, 837, 869, 1238
Hpy8I GTNNAC 4 cut(s) 781, 956, 1006, 1189
Hpy99I CGWCG 6 cut(s) 27, 296, 849, 1025, 1028, 1180
HpyAV CCTTC 2 cut(s) 64, 353
HpyCH4III ACNGT 5 cut(s) 68, 428, 442, 639, 887
HpyCH4IV ACGT 3 cut(s) 547, 643, 718
HpyCH4V TGCA 6 cut(s) 72, 183, 203, 937, 1312, 1331
HpyF10VI GCNNNNNNNGC 5 cut(s) 50, 235, 297, 306, 602
HpyF3I CTNAG 2 cut(s) 707, 1291
HpySE526I ACGT 3 cut(s) 547, 643, 718
Hsp92II CATG 8 cut(s) 40, 164, 259, 1052, 1133, 1166, 1231, 1236
KflI GGGWCCC 1 cut(s) 484
Kzo9I GATC 3 cut(s) 264, 1034, 1294
Lsp1109I GCAGC 3 cut(s) 102, 160, 843
LweI GCATC 3 cut(s) 512, 1066, 1124
MaeI CTAG 3 cut(s) 134, 420, 1366
MaeII ACGT 3 cut(s) 547, 643, 718
MaeIII GTNAC 5 cut(s) 451, 548, 639, 748, 1091
MalI GATC 3 cut(s) 266, 1036, 1296
MbiI CCGCTC 1 cut(s) 1266
MboI GATC 3 cut(s) 264, 1034, 1294
MboII GAAGA 4 cut(s) 98, 506, 580, 1040
MflI RGATCY 2 cut(s) 1034, 1294
MhlI GDGCHC 1 cut(s) 153
MluCI AATT 5 cut(s) 139, 566, 677, 1144, 1255
MlyI GAGTC 1 cut(s) 1353
MmeI TCCRAC 2 cut(s) 701, 1146
MnlI CCTC 6 cut(s) 120, 323, 399, 531, 695, 1048
Mph1103I ATGCAT 1 cut(s) 939
MseI TTAA 5 cut(s) 399, 732, 932, 1254, 1353
MslI CAYNNNNRTG 3 cut(s) 94, 229, 692
MspA1I CMGCKG 2 cut(s) 44, 229
MspI CCGG 3 cut(s) 481, 500, 746
MspR9I CCNGG 1 cut(s) 482
Mva1269I GAATGC 1 cut(s) 287
MvnI CGCG 1 cut(s) 1239
MwoI GCNNNNNNNGC 5 cut(s) 50, 235, 297, 306, 602
NciI CCSGG 1 cut(s) 482
NdeI CATATG 1 cut(s) 693
NdeII GATC 3 cut(s) 264, 1034, 1294
NlaIII CATG 8 cut(s) 40, 164, 259, 1052, 1133, 1166, 1231, 1236
NlaIV GGNNCC 4 cut(s) 485, 486, 970, 1270
NmuCI GTSAC 4 cut(s) 451, 548, 748, 1091
NruI TCGCGA 1 cut(s) 1239
NsiI ATGCAT 1 cut(s) 939
NspI RCATGY 2 cut(s) 1052, 1231
OliI CACNNNNGTG 1 cut(s) 229
PceI AGGCCT 1 cut(s) 705
PciI ACATGT 1 cut(s) 1048
PctI GAATGC 1 cut(s) 287
PfeI GAWTC 3 cut(s) 446, 610, 914
PfoI TCCNGGA 1 cut(s) 480
PkrI GCNGC 7 cut(s) 43, 117, 175, 237, 299, 311, 858
PleI GAGTC 1 cut(s) 1353
PpsI GAGTC 1 cut(s) 1353
Ppu21I YACGTR 1 cut(s) 644
PpuMI RGGWCCY 1 cut(s) 484
PscI ACATGT 1 cut(s) 1048
PshAI GACNNNNGTC 1 cut(s) 462
PsiI TTATAA 1 cut(s) 891
Psp1406I AACGTT 1 cut(s) 718
Psp5II RGGWCCY 1 cut(s) 484
PspN4I GGNNCC 4 cut(s) 485, 486, 970, 1270
PspPI GGNCC 3 cut(s) 464, 484, 969
PspPPI RGGWCCY 1 cut(s) 484
PstI CTGCAG 1 cut(s) 1333
PsuI RGATCY 2 cut(s) 1034, 1294
RruI TCGCGA 1 cut(s) 1239
RsaI GTAC 3 cut(s) 5, 80, 1344
RsaNI GTAC 3 cut(s) 4, 79, 1343
RseI CAYNNNNRTG 3 cut(s) 94, 229, 692
SaqAI TTAA 5 cut(s) 399, 732, 932, 1254, 1353
SatI GCNGC 7 cut(s) 42, 116, 174, 236, 298, 310, 857
Sau3AI GATC 3 cut(s) 264, 1034, 1294
Sau96I GGNCC 3 cut(s) 464, 484, 969
SchI GAGTC 1 cut(s) 1353
ScrFI CCNGG 1 cut(s) 482
SduI GDGCHC 1 cut(s) 153
SfaNI GCATC 3 cut(s) 512, 1066, 1124
SfcI CTRYAG 2 cut(s) 64, 1329
SinI GGWCC 2 cut(s) 464, 484
SmiMI CAYNNNNRTG 3 cut(s) 94, 229, 692
SnaBI TACGTA 1 cut(s) 644
Sse9I AATT 5 cut(s) 139, 566, 677, 1144, 1255
SseBI AGGCCT 1 cut(s) 705
SsiI CCGC 8 cut(s) 42, 229, 235, 297, 310, 1266, 1325, 1363
SspI AATATT 1 cut(s) 379
SspMI CTAG 3 cut(s) 134, 420, 1366
StuI AGGCCT 1 cut(s) 705
StyD4I CCNGG 1 cut(s) 480
StyI CCWWGG 3 cut(s) 286, 460, 921
TaaI ACNGT 5 cut(s) 68, 428, 442, 639, 887
TaiI ACGT 3 cut(s) 550, 646, 721
TaqI TCGA 2 cut(s) 942, 1020
TasI AATT 5 cut(s) 139, 566, 677, 1144, 1255
TauI GCSGC 4 cut(s) 44, 238, 300, 312
TfiI GAWTC 3 cut(s) 446, 610, 914
Tru1I TTAA 5 cut(s) 399, 732, 932, 1254, 1353
Tru9I TTAA 5 cut(s) 399, 732, 932, 1254, 1353
TscAI CASTG 2 cut(s) 642, 757
TseFI GTSAC 4 cut(s) 451, 548, 748, 1091
TseI GCWGC 3 cut(s) 115, 173, 856
Tsp45I GTSAC 4 cut(s) 451, 548, 748, 1091
TspDTI ATGAA 8 cut(s) 288, 294, 676, 680, 690, 710, 1075, 1118
TspGWI ACGGA 4 cut(s) 439, 1047, 1093, 1206
TspRI CASTG 2 cut(s) 642, 757
VpaK11BI GGWCC 2 cut(s) 464, 484
XapI RAATTY 3 cut(s) 566, 677, 1144
XbaI TCTAGA 1 cut(s) 133
XceI RCATGY 2 cut(s) 1052, 1231
XspI CTAG 3 cut(s) 134, 420, 1366
Zsp2I ATGCAT 1 cut(s) 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.