Prupe.2G253900_v2.0.a1

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000064
Physical Location & Seq
Forward (+)
26709454 .. 26710967
1514 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G253900.1

Sequence Viewer

Length: 1362 bp
ATGGGTGATGGTGGTGCTAATGTTAGAGATATAATAGTGAGCGGTTGTGGTTCTGATTTTGATCCAGAATGGGCAAGCCTTCCTCTGCTCGTTGTGTTTTTGGTGCTTGATAAGTTGATGGAACTCATCGACCATGTGCGATTTGCTGCCGTTTGCAAAGAATGGTCTTGTCTTGCGAAAGACTACAATCGTTCAACTCAGCGCTGGTCTCCCATGCTGCTGATCCCAACCCAATTGGCAAAGTCTAATCAAACACTAGTCTATAGTGATTGTGAAGGAAAAATCTACAAGAATATTCAGGGTATTGAATTCCCAGAACCAATGCCTAAAACCAAATTTACACATATATATAACCCTATGTATAATAGGCACTGCTGTTCCCCTGGATATGGTTGGTTGGCCATTGTAGATTGGTATTATCATTATAATGGAGGCCGTTATGGATACCACCAAGTCATTATAACTCTCTCGAACCCTTTCAGCAGTAGCAAAGCAGTGCCGCCGTCCAACATCAGTCTCCCTCCCTTGGAATCAGAAGATATCCTATTCGCCCTGTCCTCCGGGAGGCAAGTCGAGACCCGCACAAAGGTTATGTTGTCCGCTGATCCAGCTTTGAATCCGGACAGTTATGCGGTTATAGCATTCTTCCCTGGTGACTTCCATATTTTTTACACGGGAGCAAGATTCACTGAAGAAGGACGAAGTATTTGGCGCAACCATCGAAATGCATTATTTCAGTTTTATGACGCTATTTTTTACAAAGGCCTCGTCTATGCAGCTGATCACCTTCGTGGGTTGATTCACTCGTTCGACCTTAATTTGTTAGAGGAGGAATTTGACTGCTCACGCACACGTTTTCCAGCACAACCTTATTATAATATGTTCAAACGCCATCCCTTTTGTCCACCATATGTTGTGAAATCAACCAAAGGGGACCTGTTACATGTTGTAAGATTTTGTGAATTGAAGAAAGAAGATGGCTCGTCCTCGTCCTCGTCCCGCGGGGAGTACATCACCACGCACTTTATGGTTTTCAAGGTACCACCATTCAACGATGAAGAATGCGAATGGTATGAAATTGGGGAGTATGTTGAGCTCGAAAGCCTTGGAGATGAGGCTCTCTTCGTTGGGGACAATTACTCTGTATCAGTTTTGGCTTCCAAGTTTCGTGGGTGTCAACCAAACTGCATATACTTTACAGATGATTCCATCAATTTTCGACAAAATGCGTACATAGCATGTGACATGGGCATCTTCAACTTAGAGGATAGAACCATTGCCCAACATTGCCCTCCAAGTTGTTGGGAAAAGGGCATGCCAACACCATTTTGGATTACGCCACCCTTTAGTGGACTCTACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

454

Amino Acids

51.88

Weight (kDa)

5.49

Isoelectric Point (pI)

50.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 426, 461, 876
Acc65I GGTACC 1 cut(s) 1039
AccB1I GGYRCC 1 cut(s) 1039
AccBSI CCGCTC 1 cut(s) 42
AccII CGCG 1 cut(s) 1002
AccIII TCCGGA 1 cut(s) 619
AciI CCGC 7 cut(s) 42, 500, 580, 600, 632, 1000, 1002
AclWI GGATC 3 cut(s) 56, 217, 599
AcoI YGGCCR 1 cut(s) 399
AcsI RAATTY 3 cut(s) 308, 335, 833
AcuI CTGAAG 1 cut(s) 711
AfaI GTAC 3 cut(s) 1010, 1041, 1232
AfeI AGCGCT 1 cut(s) 203
AfiI CCNNNNNNNGG 5 cut(s) 389, 526, 564, 586, 1349
AflIII ACRYGT 2 cut(s) 851, 943
AgsI TTSAA 8 cut(s) 195, 308, 616, 886, 967, 1036, 1051, 1258
AhlI ACTAGT 1 cut(s) 256
AjnI CCWGG 2 cut(s) 382, 649
AleI CACNNNNGTG 1 cut(s) 789
AluBI AGCT 3 cut(s) 611, 779, 1096
AluI AGCT 3 cut(s) 611, 779, 1096
Alw21I GWGCWC 1 cut(s) 1098
Alw26I GTCTC 3 cut(s) 213, 521, 569
AlwI GGATC 3 cut(s) 56, 217, 599
Aor13HI TCCGGA 1 cut(s) 619
Aor51HI AGCGCT 1 cut(s) 203
AoxI GGCC 3 cut(s) 399, 433, 763
ApeKI GCWGC 3 cut(s) 146, 217, 776
ApoI RAATTY 3 cut(s) 308, 335, 833
ArsI GACNNNNNNTTYG 4 cut(s) 690, 722, 753, 785
Asp700I GAANNNNTTC 1 cut(s) 476
Asp718I GGTACC 1 cut(s) 1039
AspLEI GCGC 2 cut(s) 204, 714
AspS9I GGNCC 1 cut(s) 934
AsuC2I CCSGG 1 cut(s) 562
AsuHPI GGTGA 4 cut(s) 17, 665, 776, 1006
AvaII GGWCC 1 cut(s) 934
BalI TGGCCA 1 cut(s) 401
BanI GGYRCC 1 cut(s) 1039
BanII GRGCYC 1 cut(s) 1098
Bbv12I GWGCWC 1 cut(s) 1098
BbvI GCAGC 3 cut(s) 133, 204, 788
BccI CCATC 6 cut(s) 2, 112, 726, 900, 971, 1217
BceAI ACGGC 3 cut(s) 134, 420, 487
BciT130I CCWGG 2 cut(s) 384, 651
BciVI GTATCC 1 cut(s) 437
BclI TGATCA 1 cut(s) 781
BcnI CCSGG 1 cut(s) 562
BcoDI GTCTC 3 cut(s) 213, 521, 569
BcuI ACTAGT 1 cut(s) 256
BfaI CTAG 1 cut(s) 257
BfmI CTRYAG 1 cut(s) 262
BfoI RGCGCY 1 cut(s) 205
BfuI GTATCC 1 cut(s) 437
BisI GCNGC 4 cut(s) 147, 218, 500, 777
BlsI GCNGC 4 cut(s) 148, 219, 501, 778
Bme1390I CCNGG 3 cut(s) 384, 562, 651
Bme18I GGWCC 1 cut(s) 934
BmgT120I GGNCC 1 cut(s) 934
BmiI GGNNCC 2 cut(s) 935, 1041
BmrFI CCNGG 3 cut(s) 384, 562, 651
BmsI GCATC 1 cut(s) 1260
BpuMI CCSGG 1 cut(s) 562
BsaBI GATNNNNATC 1 cut(s) 60
BsaI GGTCTC 2 cut(s) 213, 569
BsaJI CCNNGG 5 cut(s) 382, 525, 649, 1000, 1105
BsaWI WCCGGW 1 cut(s) 619
Bsc4I CCNNNNNNNGG 5 cut(s) 389, 526, 564, 586, 1349
Bse3DI GCAATG 2 cut(s) 1275, 1285
Bse8I GATNNNNATC 1 cut(s) 60
BseAI TCCGGA 1 cut(s) 619
BseBI CCWGG 2 cut(s) 384, 651
BseDI CCNNGG 5 cut(s) 382, 525, 649, 1000, 1105
BseGI GGATG 1 cut(s) 892
BseJI GATNNNNATC 1 cut(s) 60
BseLI CCNNNNNNNGG 5 cut(s) 389, 526, 564, 586, 1349
BseMI GCAATG 2 cut(s) 1275, 1285
BseMII CTCAG 1 cut(s) 212
BseRI GAGGAG 1 cut(s) 842
BseXI GCAGC 3 cut(s) 133, 204, 788
Bsh1236I CGCG 1 cut(s) 1002
BshFI GGCC 3 cut(s) 401, 435, 765
BshNI GGYRCC 1 cut(s) 1039
BsiHKAI GWGCWC 1 cut(s) 1098
BsiSI CCGG 2 cut(s) 561, 620
BslFI GGGAC 3 cut(s) 947, 982, 1145
BslI CCNNNNNNNGG 5 cut(s) 389, 526, 564, 586, 1349
BsmAI GTCTC 3 cut(s) 213, 521, 569
BsmFI GGGAC 3 cut(s) 947, 982, 1145
BsmI GAATGC 2 cut(s) 641, 1067
BsnI GGCC 3 cut(s) 401, 435, 765
Bso31I GGTCTC 2 cut(s) 213, 569
Bsp1286I GDGCHC 1 cut(s) 1098
Bsp13I TCCGGA 1 cut(s) 619
Bsp143I GATC 4 cut(s) 61, 222, 604, 781
BspACI CCGC 7 cut(s) 42, 500, 580, 600, 632, 1000, 1002
BspANI GGCC 3 cut(s) 401, 435, 765
BspCNI CTCAG 1 cut(s) 211
BspEI TCCGGA 1 cut(s) 619
BspFNI CGCG 1 cut(s) 1002
BspLI GGNNCC 2 cut(s) 935, 1041
BspPI GGATC 3 cut(s) 56, 217, 599
BspT107I GGYRCC 1 cut(s) 1039
BspTNI GGTCTC 2 cut(s) 213, 569
BsrBI CCGCTC 1 cut(s) 42
BsrDI GCAATG 2 cut(s) 1275, 1285
BssECI CCNNGG 5 cut(s) 382, 525, 649, 1000, 1105
BssMI GATC 4 cut(s) 61, 222, 604, 781
BssT1I CCWWGG 2 cut(s) 525, 1105
Bst2UI CCWGG 2 cut(s) 384, 651
Bst4CI ACNGT 1 cut(s) 626
Bst6I CTCTTC 1 cut(s) 1127
BstC8I GCNNGC 2 cut(s) 76, 1316
BstDEI CTNAG 2 cut(s) 198, 1261
BstDSI CCRYGG 1 cut(s) 1000
BstENI CCTNNNNNAGG 1 cut(s) 562
BstF5I GGATG 1 cut(s) 892
BstFNI CGCG 1 cut(s) 1002
BstH2I RGCGCY 1 cut(s) 205
BstHHI GCGC 2 cut(s) 204, 714
BstKTI GATC 4 cut(s) 64, 225, 607, 784
BstMAI GTCTC 3 cut(s) 213, 521, 569
BstMBI GATC 4 cut(s) 61, 222, 604, 781
BstMWI GCNNNNNNNGC 3 cut(s) 608, 638, 1235
BstNI CCWGG 2 cut(s) 384, 651
BstNSI RCATGY 3 cut(s) 947, 1242, 1318
BstSCI CCNGG 3 cut(s) 382, 560, 649
BstSFI CTRYAG 1 cut(s) 262
BstUI CGCG 1 cut(s) 1002
BstV1I GCAGC 3 cut(s) 133, 204, 788
BstXI CCANNNNNNTGG 1 cut(s) 1302
BsuI GTATCC 1 cut(s) 437
BsuRI GGCC 3 cut(s) 401, 435, 765
BtgI CCRYGG 1 cut(s) 1000
BtsCI GGATG 1 cut(s) 892
BtsI GCAGTG 2 cut(s) 370, 501
BtsIMutI CAGTG 3 cut(s) 370, 501, 687
Cac8I GCNNGC 2 cut(s) 76, 1316
CfoI GCGC 2 cut(s) 204, 714
Cfr13I GGNCC 1 cut(s) 934
Cfr42I CCGCGG 1 cut(s) 1003
CseI GACGC 1 cut(s) 755
Csp6I GTAC 3 cut(s) 1009, 1040, 1231
CspCI CAANNNNNGTGG 2 cut(s) 1150, 1185
CviAII CATG 6 cut(s) 134, 214, 944, 1239, 1246, 1315
CviQI GTAC 3 cut(s) 1009, 1040, 1231
DdeI CTNAG 2 cut(s) 198, 1261
DpnI GATC 4 cut(s) 63, 224, 606, 783
DpnII GATC 4 cut(s) 61, 222, 604, 781
EaeI YGGCCR 1 cut(s) 399
Eam1104I CTCTTC 1 cut(s) 1127
EarI CTCTTC 1 cut(s) 1127
Ecl136II GAGCTC 1 cut(s) 1096
Eco130I CCWWGG 2 cut(s) 525, 1105
Eco147I AGGCCT 1 cut(s) 765
Eco24I GRGCYC 1 cut(s) 1098
Eco31I GGTCTC 2 cut(s) 213, 569
Eco32I GATATC 1 cut(s) 541
Eco47I GGWCC 1 cut(s) 934
Eco47III AGCGCT 1 cut(s) 203
Eco53kI GAGCTC 1 cut(s) 1096
Eco57I CTGAAG 1 cut(s) 711
EcoICRI GAGCTC 1 cut(s) 1096
EcoNI CCTNNNNNAGG 1 cut(s) 562
EcoO109I RGGNCCY 1 cut(s) 934
EcoRI GAATTC 1 cut(s) 308
EcoRII CCWGG 2 cut(s) 382, 649
EcoRV GATATC 1 cut(s) 541
EcoT14I CCWWGG 2 cut(s) 525, 1105
EcoT22I ATGCAT 1 cut(s) 730
EcoT38I GRGCYC 1 cut(s) 1098
ErhI CCWWGG 2 cut(s) 525, 1105
FaeI CATG 6 cut(s) 137, 217, 947, 1242, 1249, 1318
FaqI GGGAC 3 cut(s) 947, 982, 1145
FatI CATG 6 cut(s) 133, 213, 943, 1238, 1245, 1314
FauI CCCGC 3 cut(s) 587, 995, 1007
FauNDI CATATG 1 cut(s) 910
FbaI TGATCA 1 cut(s) 781
Fnu4HI GCNGC 4 cut(s) 147, 218, 500, 777
FokI GGATG 1 cut(s) 879
FriOI GRGCYC 1 cut(s) 1098
Fsp4HI GCNGC 4 cut(s) 147, 218, 500, 777
FspBI CTAG 1 cut(s) 257
GlaI GCGC 2 cut(s) 203, 713
GluI GCNGC 4 cut(s) 147, 218, 500, 777
HaeII RGCGCY 1 cut(s) 205
HaeIII GGCC 3 cut(s) 401, 435, 765
HapII CCGG 2 cut(s) 561, 620
HgaI GACGC 1 cut(s) 755
HhaI GCGC 2 cut(s) 204, 714
Hin1II CATG 6 cut(s) 137, 217, 947, 1242, 1249, 1318
Hin6I GCGC 2 cut(s) 202, 712
HinP1I GCGC 2 cut(s) 202, 712
HincII GTYRAC 1 cut(s) 1178
HindII GTYRAC 1 cut(s) 1178
HinfI GANTC 6 cut(s) 530, 616, 684, 799, 1205, 1353
HpaII CCGG 2 cut(s) 561, 620
HphI GGTGA 4 cut(s) 17, 665, 776, 1006
Hpy166II GTNNAC 3 cut(s) 905, 1178, 1352
Hpy188I TCNGA 2 cut(s) 55, 535
Hpy188III TCNNGA 4 cut(s) 65, 469, 574, 620
Hpy8I GTNNAC 3 cut(s) 905, 1178, 1352
HpyAV CCTTC 4 cut(s) 89, 269, 689, 797
HpyCH4III ACNGT 1 cut(s) 626
HpyCH4IV ACGT 1 cut(s) 853
HpyCH4V TGCA 4 cut(s) 156, 728, 776, 1188
HpyF10VI GCNNNNNNNGC 3 cut(s) 608, 638, 1235
HpyF3I CTNAG 2 cut(s) 198, 1261
HpySE526I ACGT 1 cut(s) 853
Hsp92II CATG 6 cut(s) 137, 217, 947, 1242, 1249, 1318
HspAI GCGC 2 cut(s) 202, 712
Kpn2I TCCGGA 1 cut(s) 619
KpnI GGTACC 1 cut(s) 1043
Ksp22I TGATCA 1 cut(s) 781
KspI CCGCGG 1 cut(s) 1003
Kzo9I GATC 4 cut(s) 61, 222, 604, 781
LmnI GCTCC 1 cut(s) 677
Lsp1109I GCAGC 3 cut(s) 133, 204, 788
LweI GCATC 1 cut(s) 1260
MaeI CTAG 1 cut(s) 257
MaeII ACGT 1 cut(s) 853
MaeIII GTNAC 3 cut(s) 653, 939, 1241
MalI GATC 4 cut(s) 63, 224, 606, 783
MbiI CCGCTC 1 cut(s) 42
MboI GATC 4 cut(s) 61, 222, 604, 781
MboII GAAGA 8 cut(s) 548, 637, 704, 979, 986, 1070, 1114, 1246
MfeI CAATTG 1 cut(s) 233
MhlI GDGCHC 1 cut(s) 1098
MlsI TGGCCA 1 cut(s) 401
MluCI AATT 9 cut(s) 233, 308, 335, 817, 833, 962, 1077, 1135, 1213
MluNI TGGCCA 1 cut(s) 401
MlyI GAGTC 1 cut(s) 1347
MmeI TCCRAC 1 cut(s) 531
Mox20I TGGCCA 1 cut(s) 401
Mph1103I ATGCAT 1 cut(s) 730
MroI TCCGGA 1 cut(s) 619
MroXI GAANNNNTTC 1 cut(s) 476
MscI TGGCCA 1 cut(s) 401
MseI TTAA 1 cut(s) 816
MslI CAYNNNNRTG 3 cut(s) 426, 723, 789
Msp20I TGGCCA 1 cut(s) 401
MspA1I CMGCKG 3 cut(s) 602, 779, 1002
MspI CCGG 2 cut(s) 561, 620
MspR9I CCNGG 3 cut(s) 384, 562, 651
MunI CAATTG 1 cut(s) 233
Mva1269I GAATGC 2 cut(s) 641, 1067
MvaI CCWGG 2 cut(s) 384, 651
MvnI CGCG 1 cut(s) 1002
MwoI GCNNNNNNNGC 3 cut(s) 608, 638, 1235
NciI CCSGG 1 cut(s) 562
NdeI CATATG 1 cut(s) 910
NdeII GATC 4 cut(s) 61, 222, 604, 781
NlaIII CATG 6 cut(s) 137, 217, 947, 1242, 1249, 1318
NlaIV GGNNCC 2 cut(s) 935, 1041
NmuCI GTSAC 2 cut(s) 653, 1241
NsiI ATGCAT 1 cut(s) 730
NspI RCATGY 3 cut(s) 947, 1242, 1318
OliI CACNNNNGTG 1 cut(s) 789
PaeI GCATGC 1 cut(s) 1318
PceI AGGCCT 1 cut(s) 765
PciI ACATGT 1 cut(s) 943
PctI GAATGC 2 cut(s) 641, 1067
PdmI GAANNNNTTC 1 cut(s) 476
PfeI GAWTC 5 cut(s) 530, 616, 684, 799, 1205
PfoI TCCNGGA 1 cut(s) 560
PkrI GCNGC 4 cut(s) 148, 219, 501, 778
PleI GAGTC 1 cut(s) 1347
PpsI GAGTC 1 cut(s) 1347
PpuMI RGGWCCY 1 cut(s) 934
PscI ACATGT 1 cut(s) 943
PsiI TTATAA 3 cut(s) 426, 461, 876
Psp124BI GAGCTC 1 cut(s) 1098
Psp5II RGGWCCY 1 cut(s) 934
Psp6I CCWGG 2 cut(s) 382, 649
PspGI CCWGG 2 cut(s) 382, 649
PspN4I GGNNCC 2 cut(s) 935, 1041
PspPI GGNCC 1 cut(s) 934
PspPPI RGGWCCY 1 cut(s) 934
PvuII CAGCTG 1 cut(s) 779
RsaI GTAC 3 cut(s) 1010, 1041, 1232
RsaNI GTAC 3 cut(s) 1009, 1040, 1231
RseI CAYNNNNRTG 3 cut(s) 426, 723, 789
SacI GAGCTC 1 cut(s) 1098
SacII CCGCGG 1 cut(s) 1003
SaqAI TTAA 1 cut(s) 816
SatI GCNGC 4 cut(s) 147, 218, 500, 777
Sau3AI GATC 4 cut(s) 61, 222, 604, 781
Sau96I GGNCC 1 cut(s) 934
SchI GAGTC 1 cut(s) 1347
ScrFI CCNGG 3 cut(s) 384, 562, 651
SduI GDGCHC 1 cut(s) 1098
SfaNI GCATC 1 cut(s) 1260
SfcI CTRYAG 1 cut(s) 262
Sfr303I CCGCGG 1 cut(s) 1003
SgrBI CCGCGG 1 cut(s) 1003
SinI GGWCC 1 cut(s) 934
SmiMI CAYNNNNRTG 3 cut(s) 426, 723, 789
SpeI ACTAGT 1 cut(s) 256
SphI GCATGC 1 cut(s) 1318
Sse9I AATT 9 cut(s) 233, 308, 335, 817, 833, 962, 1077, 1135, 1213
SseBI AGGCCT 1 cut(s) 765
SsiI CCGC 7 cut(s) 42, 500, 580, 600, 632, 1000, 1002
SspI AATATT 1 cut(s) 295
SspMI CTAG 1 cut(s) 257
SstI GAGCTC 1 cut(s) 1098
StuI AGGCCT 1 cut(s) 765
StyD4I CCNGG 3 cut(s) 382, 560, 649
StyI CCWWGG 2 cut(s) 525, 1105
TaaI ACNGT 1 cut(s) 626
TaiI ACGT 1 cut(s) 856
TaqI TCGA 7 cut(s) 129, 470, 573, 721, 810, 1098, 1219
TasI AATT 9 cut(s) 233, 308, 335, 817, 833, 962, 1077, 1135, 1213
TatI WGTACW 1 cut(s) 1008
TauI GCSGC 1 cut(s) 502
TfiI GAWTC 5 cut(s) 530, 616, 684, 799, 1205
Tru1I TTAA 1 cut(s) 816
Tru9I TTAA 1 cut(s) 816
TscAI CASTG 3 cut(s) 377, 501, 694
TseFI GTSAC 2 cut(s) 653, 1241
TseI GCWGC 3 cut(s) 146, 217, 776
Tsp45I GTSAC 2 cut(s) 653, 1241
TspDTI ATGAA 2 cut(s) 1071, 1089
TspRI CASTG 3 cut(s) 377, 501, 694
VpaK11BI GGWCC 1 cut(s) 934
XagI CCTNNNNNAGG 1 cut(s) 562
XapI RAATTY 3 cut(s) 308, 335, 833
XceI RCATGY 3 cut(s) 947, 1242, 1318
XcmI CCANNNNNNNNNTGG 2 cut(s) 1024, 1326
XmnI GAANNNNTTC 1 cut(s) 476
XspI CTAG 1 cut(s) 257
Zsp2I ATGCAT 1 cut(s) 730
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.