f-box protein
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Exo_endo_phos | PF03372 | 8 - 223 | 4.9e-10 | Endonuclease/Exonuclease/phosphatase family |
| RVT_1 | PF00078 | 508 - 762 | 2.8e-24 | Reverse transcriptase (RNA-dependent DNA polymerase) |
| zf-RVT | PF13966 | 1021 - 1116 | 3.6e-15 | zinc-binding in reverse transcriptase |
| RVT_3 | PF13456 | 1221 - 1340 | 1.1e-22 | Reverse transcriptase-like |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 239 |
| Acc16I | TGCGCA | 2 cut(s) | 1824, 2876 |
| Acc36I | ACCTGC | 4 cut(s) | 814, 2794, 3048, 4010 |
| AccB1I | GGYRCC | 3 cut(s) | 1029, 2816, 3760 |
| AciI | CCGC | 6 cut(s) | 459, 469, 1036, 1319, 1436, 2723 |
| AclI | AACGTT | 2 cut(s) | 580, 3663 |
| AclWI | GGATC | 6 cut(s) | 10, 153, 947, 1157, 2020, 2271 |
| AcoI | YGGCCR | 2 cut(s) | 123, 507 |
| AcsI | RAATTY | 3 cut(s) | 1288, 2535, 3441 |
| AcuI | CTGAAG | 2 cut(s) | 839, 2768 |
| AcyI | GRCGYC | 1 cut(s) | 1030 |
| AdeI | CACNNNGTG | 1 cut(s) | 3223 |
| AfaI | GTAC | 4 cut(s) | 253, 1891, 3148, 3544 |
| AflII | CTTAAG | 1 cut(s) | 2684 |
| AflIII | ACRYGT | 1 cut(s) | 3313 |
| AgeI | ACCGGT | 2 cut(s) | 700, 3592 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 2899 |
| AjnI | CCWGG | 7 cut(s) | 39, 554, 1615, 1651, 2038, 2172, 3825 |
| Alw21I | GWGCWC | 4 cut(s) | 619, 982, 2500, 2587 |
| Alw26I | GTCTC | 6 cut(s) | 294, 1386, 2474, 2679, 2911, 3434 |
| Alw44I | GTGCAC | 1 cut(s) | 615 |
| AlwI | GGATC | 6 cut(s) | 10, 153, 947, 1157, 2020, 2271 |
| Ama87I | CYCGRG | 2 cut(s) | 140, 3182 |
| AoxI | GGCC | 7 cut(s) | 37, 123, 460, 507, 1541, 1975, 2043 |
| ApaLI | GTGCAC | 1 cut(s) | 615 |
| ApoI | RAATTY | 3 cut(s) | 1288, 2535, 3441 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3303, 3335 |
| AsiGI | ACCGGT | 2 cut(s) | 700, 3592 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1260, 3564 |
| AspLEI | GCGC | 4 cut(s) | 1032, 1825, 2370, 2877 |
| AsuC2I | CCSGG | 6 cut(s) | 132, 294, 497, 1365, 3183, 3184 |
| AvaI | CYCGRG | 2 cut(s) | 140, 3182 |
| AvaII | GGWCC | 9 cut(s) | 128, 367, 586, 792, 1066, 1367, 1936, 3630, 3898 |
| BaeGI | GKGCMC | 1 cut(s) | 619 |
| BanI | GGYRCC | 3 cut(s) | 1029, 2816, 3760 |
| BanII | GRGCYC | 2 cut(s) | 982, 2587 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 2218, 2250 |
| BauI | CACGAG | 1 cut(s) | 204 |
| BbsI | GAAGAC | 3 cut(s) | 97, 3164, 3765 |
| Bbv12I | GWGCWC | 4 cut(s) | 619, 982, 2500, 2587 |
| BceAI | ACGGC | 2 cut(s) | 388, 1098 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1697, 1731 |
| BciT130I | CCWGG | 7 cut(s) | 41, 556, 1617, 1653, 2040, 2174, 3827 |
| BclI | TGATCA | 1 cut(s) | 2839 |
| BcnI | CCSGG | 6 cut(s) | 132, 294, 497, 1365, 3183, 3184 |
| BcoDI | GTCTC | 6 cut(s) | 294, 1386, 2474, 2679, 2911, 3434 |
| BfmI | CTRYAG | 3 cut(s) | 1233, 1896, 3966 |
| BfoI | RGCGCY | 1 cut(s) | 1033 |
| BfrI | CTTAAG | 1 cut(s) | 2684 |
| BfuAI | ACCTGC | 4 cut(s) | 814, 2794, 3048, 4010 |
| BlpI | GCTNAGC | 1 cut(s) | 2360 |
| BmcAI | AGTACT | 1 cut(s) | 3148 |
| Bme18I | GGWCC | 9 cut(s) | 128, 367, 586, 792, 1066, 1367, 1936, 3630, 3898 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 2899 |
| BmeT110I | CYCGRG | 2 cut(s) | 140, 3182 |
| BpiI | GAAGAC | 3 cut(s) | 97, 3164, 3765 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2891, 2923 |
| BpmI | CTGGAG | 3 cut(s) | 542, 2563, 3226 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1170 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2360 |
| BpuEI | CTTGAG | 4 cut(s) | 1730, 2108, 2401, 2406 |
| BpuMI | CCSGG | 6 cut(s) | 132, 294, 497, 1365, 3183, 3184 |
| BsaBI | GATNNNNATC | 3 cut(s) | 669, 2484, 2526 |
| BsaHI | GRCGYC | 1 cut(s) | 1030 |
| BsaI | GGTCTC | 1 cut(s) | 2474 |
| BsaJI | CCNNGG | 9 cut(s) | 131, 404, 555, 716, 1011, 2039, 3181, 3182, 3639 |
| BsaWI | WCCGGW | 3 cut(s) | 588, 700, 3592 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 634, 664, 3199, 3229 |
| Bse118I | RCCGGY | 4 cut(s) | 320, 416, 700, 3592 |
| Bse1I | ACTGG | 7 cut(s) | 2546, 2710, 3268, 3295, 3426, 3527, 3632 |
| Bse3DI | GCAATG | 2 cut(s) | 1157, 2258 |
| Bse8I | GATNNNNATC | 3 cut(s) | 669, 2484, 2526 |
| BseBI | CCWGG | 7 cut(s) | 41, 556, 1617, 1653, 2040, 2174, 3827 |
| BseDI | CCNNGG | 9 cut(s) | 131, 404, 555, 716, 1011, 2039, 3181, 3182, 3639 |
| BseJI | GATNNNNATC | 3 cut(s) | 669, 2484, 2526 |
| BseMI | GCAATG | 2 cut(s) | 1157, 2258 |
| BseNI | ACTGG | 7 cut(s) | 2546, 2710, 3268, 3295, 3426, 3527, 3632 |
| BseRI | GAGGAG | 1 cut(s) | 3348 |
| BseSI | GKGCMC | 1 cut(s) | 619 |
| BsgI | GTGCAG | 2 cut(s) | 681, 3321 |
| BshFI | GGCC | 7 cut(s) | 39, 125, 462, 509, 1543, 1977, 2045 |
| BshNI | GGYRCC | 3 cut(s) | 1029, 2816, 3760 |
| BshTI | ACCGGT | 2 cut(s) | 700, 3592 |
| BsiHKAI | GWGCWC | 4 cut(s) | 619, 982, 2500, 2587 |
| BsiHKCI | CYCGRG | 2 cut(s) | 140, 3182 |
| BslFI | GGGAC | 4 cut(s) | 380, 1079, 1949, 3616 |
| BsmAI | GTCTC | 6 cut(s) | 294, 1386, 2474, 2679, 2911, 3434 |
| BsmBI | CGTCTC | 1 cut(s) | 294 |
| BsmFI | GGGAC | 4 cut(s) | 380, 1079, 1949, 3616 |
| BsnI | GGCC | 7 cut(s) | 39, 125, 462, 509, 1543, 1977, 2045 |
| Bso31I | GGTCTC | 1 cut(s) | 2474 |
| BsoBI | CYCGRG | 2 cut(s) | 140, 3182 |
| Bsp1286I | GDGCHC | 4 cut(s) | 619, 982, 2500, 2587 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2360 |
| Bsp19I | CCATGG | 1 cut(s) | 3639 |
| BspACI | CCGC | 6 cut(s) | 459, 469, 1036, 1319, 1436, 2723 |
| BspANI | GGCC | 7 cut(s) | 39, 125, 462, 509, 1543, 1977, 2045 |
| BspHI | TCATGA | 1 cut(s) | 604 |
| BspMAI | CTGCAG | 1 cut(s) | 1237 |
| BspMI | ACCTGC | 4 cut(s) | 814, 2794, 3048, 4010 |
| BspPI | GGATC | 6 cut(s) | 10, 153, 947, 1157, 2020, 2271 |
| BspQI | GCTCTTC | 1 cut(s) | 987 |
| BspT107I | GGYRCC | 3 cut(s) | 1029, 2816, 3760 |
| BspTI | CTTAAG | 1 cut(s) | 2684 |
| BspTNI | GGTCTC | 1 cut(s) | 2474 |
| BsrDI | GCAATG | 2 cut(s) | 1157, 2258 |
| BsrFI | RCCGGY | 4 cut(s) | 320, 416, 700, 3592 |
| BsrI | ACTGG | 7 cut(s) | 2546, 2710, 3268, 3295, 3426, 3527, 3632 |
| BssAI | RCCGGY | 4 cut(s) | 320, 416, 700, 3592 |
| BssECI | CCNNGG | 9 cut(s) | 131, 404, 555, 716, 1011, 2039, 3181, 3182, 3639 |
| BssNI | GRCGYC | 1 cut(s) | 1030 |
| BssSI | CACGAG | 1 cut(s) | 204 |
| BssT1I | CCWWGG | 3 cut(s) | 716, 1011, 3639 |
| Bst2BI | CACGAG | 1 cut(s) | 204 |
| Bst2UI | CCWGG | 7 cut(s) | 41, 556, 1617, 1653, 2040, 2174, 3827 |
| Bst4CI | ACNGT | 9 cut(s) | 280, 478, 515, 566, 1070, 1843, 1864, 2779, 2883 |
| Bst6I | CTCTTC | 6 cut(s) | 224, 987, 1638, 2914, 3555, 3888 |
| BstACI | GRCGYC | 1 cut(s) | 1030 |
| BstAFI | CTTAAG | 1 cut(s) | 2684 |
| BstC8I | GCNNGC | 8 cut(s) | 615, 1034, 2151, 2366, 2607, 2628, 3745, 3798 |
| BstDSI | CCRYGG | 2 cut(s) | 404, 3639 |
| BstEII | GGTNACC | 2 cut(s) | 3134, 3595 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 3604 |
| BstH2I | RGCGCY | 1 cut(s) | 1033 |
| BstHHI | GCGC | 4 cut(s) | 1032, 1825, 2370, 2877 |
| BstMAI | GTCTC | 6 cut(s) | 294, 1386, 2474, 2679, 2911, 3434 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 330, 1175, 2365, 3255, 3749, 3881 |
| BstNI | CCWGG | 7 cut(s) | 41, 556, 1617, 1653, 2040, 2174, 3827 |
| BstNSI | RCATGY | 3 cut(s) | 2609, 3216, 3317 |
| BstPI | GGTNACC | 2 cut(s) | 3134, 3595 |
| BstSFI | CTRYAG | 3 cut(s) | 1233, 1896, 3966 |
| BstSLI | GKGCMC | 1 cut(s) | 619 |
| BstV2I | GAAGAC | 3 cut(s) | 97, 3164, 3765 |
| BstX2I | RGATCY | 2 cut(s) | 15, 145 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 3833 |
| BstYI | RGATCY | 2 cut(s) | 15, 145 |
| BsuRI | GGCC | 7 cut(s) | 39, 125, 462, 509, 1543, 1977, 2045 |
| BtgI | CCRYGG | 2 cut(s) | 404, 3639 |
| BtsI | GCAGTG | 1 cut(s) | 2191 |
| BtsIMutI | CAGTG | 7 cut(s) | 276, 1134, 1869, 2015, 2191, 2539, 2849 |
| BveI | ACCTGC | 4 cut(s) | 814, 2794, 3048, 4010 |
| Cac8I | GCNNGC | 8 cut(s) | 615, 1034, 2151, 2366, 2607, 2628, 3745, 3798 |
| CciI | TCATGA | 1 cut(s) | 604 |
| CfoI | GCGC | 4 cut(s) | 1032, 1825, 2370, 2877 |
| Cfr10I | RCCGGY | 4 cut(s) | 320, 416, 700, 3592 |
| Cfr9I | CCCGGG | 1 cut(s) | 3182 |
| CpoI | CGGWCCG | 1 cut(s) | 128 |
| Csp6I | GTAC | 4 cut(s) | 252, 1890, 3147, 3543 |
| CspAI | ACCGGT | 2 cut(s) | 700, 3592 |
| CspI | CGGWCCG | 1 cut(s) | 128 |
| CviQI | GTAC | 4 cut(s) | 252, 1890, 3147, 3543 |
| DinI | GGCGCC | 1 cut(s) | 1031 |
| DraI | TTTAAA | 1 cut(s) | 1452 |
| DraIII | CACNNNGTG | 1 cut(s) | 3223 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 239 |
| DriI | GACNNNNNGTC | 1 cut(s) | 2899 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 239 |
| EaeI | YGGCCR | 2 cut(s) | 123, 507 |
| Eam1104I | CTCTTC | 6 cut(s) | 224, 987, 1638, 2914, 3555, 3888 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 2899 |
| EarI | CTCTTC | 6 cut(s) | 224, 987, 1638, 2914, 3555, 3888 |
| Ecl136II | GAGCTC | 2 cut(s) | 980, 2585 |
| Eco130I | CCWWGG | 3 cut(s) | 716, 1011, 3639 |
| Eco147I | AGGCCT | 2 cut(s) | 1543, 1977 |
| Eco24I | GRGCYC | 2 cut(s) | 982, 2587 |
| Eco31I | GGTCTC | 1 cut(s) | 2474 |
| Eco32I | GATATC | 3 cut(s) | 1665, 1756, 2276 |
| Eco47I | GGWCC | 9 cut(s) | 128, 367, 586, 792, 1066, 1367, 1936, 3630, 3898 |
| Eco53kI | GAGCTC | 2 cut(s) | 980, 2585 |
| Eco57I | CTGAAG | 2 cut(s) | 839, 2768 |
| Eco88I | CYCGRG | 2 cut(s) | 140, 3182 |
| Eco91I | GGTNACC | 2 cut(s) | 3134, 3595 |
| EcoICRI | GAGCTC | 2 cut(s) | 980, 2585 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 3604 |
| EcoO109I | RGGNCCY | 3 cut(s) | 367, 1936, 2043 |
| EcoO65I | GGTNACC | 2 cut(s) | 3134, 3595 |
| EcoRI | GAATTC | 1 cut(s) | 1288 |
| EcoRII | CCWGG | 7 cut(s) | 39, 554, 1615, 1651, 2038, 2172, 3825 |
| EcoRV | GATATC | 3 cut(s) | 1665, 1756, 2276 |
| EcoT14I | CCWWGG | 3 cut(s) | 716, 1011, 3639 |
| EcoT22I | ATGCAT | 3 cut(s) | 179, 1350, 1710 |
| EcoT38I | GRGCYC | 2 cut(s) | 982, 2587 |
| EgeI | GGCGCC | 1 cut(s) | 1031 |
| EheI | GGCGCC | 1 cut(s) | 1031 |
| ErhI | CCWWGG | 3 cut(s) | 716, 1011, 3639 |
| Esp3I | CGTCTC | 1 cut(s) | 294 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 3552, 3584 |
| FaqI | GGGAC | 4 cut(s) | 380, 1079, 1949, 3616 |
| FauNDI | CATATG | 2 cut(s) | 2074, 4047 |
| FbaI | TGATCA | 1 cut(s) | 2839 |
| FriOI | GRGCYC | 2 cut(s) | 982, 2587 |
| FspI | TGCGCA | 2 cut(s) | 1824, 2876 |
| GlaI | GCGC | 4 cut(s) | 1031, 1824, 2369, 2876 |
| GsuI | CTGGAG | 3 cut(s) | 542, 2563, 3226 |
| HaeII | RGCGCY | 1 cut(s) | 1033 |
| HaeIII | GGCC | 7 cut(s) | 39, 125, 462, 509, 1543, 1977, 2045 |
| HhaI | GCGC | 4 cut(s) | 1032, 1825, 2370, 2877 |
| Hin1I | GRCGYC | 1 cut(s) | 1030 |
| Hin6I | GCGC | 4 cut(s) | 1030, 1823, 2368, 2875 |
| HinP1I | GCGC | 4 cut(s) | 1030, 1823, 2368, 2875 |
| HincII | GTYRAC | 2 cut(s) | 46, 91 |
| HindII | GTYRAC | 2 cut(s) | 46, 91 |
| HindIII | AAGCTT | 4 cut(s) | 501, 1020, 1095, 1764 |
| HpaI | GTTAAC | 1 cut(s) | 46 |
| Hpy99I | CGWCG | 1 cut(s) | 305 |
| HpyAV | CCTTC | 9 cut(s) | 190, 966, 1324, 1967, 2300, 2751, 3181, 3247, 3721 |
| HpyCH4III | ACNGT | 9 cut(s) | 280, 478, 515, 566, 1070, 1843, 1864, 2779, 2883 |
| HpyCH4IV | ACGT | 4 cut(s) | 287, 580, 1108, 3663 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 330, 1175, 2365, 3255, 3749, 3881 |
| HpySE526I | ACGT | 4 cut(s) | 287, 580, 1108, 3663 |
| Hsp92I | GRCGYC | 1 cut(s) | 1030 |
| HspAI | GCGC | 4 cut(s) | 1030, 1823, 2368, 2875 |
| KasI | GGCGCC | 1 cut(s) | 1029 |
| KflI | GGGWCCC | 1 cut(s) | 1936 |
| Ksp22I | TGATCA | 1 cut(s) | 2839 |
| KspAI | GTTAAC | 1 cut(s) | 46 |
| LguI | GCTCTTC | 1 cut(s) | 987 |
| LmnI | GCTCC | 2 cut(s) | 2582, 3361 |
| MaeII | ACGT | 4 cut(s) | 287, 580, 1108, 3663 |
| MfeI | CAATTG | 1 cut(s) | 2678 |
| MflI | RGATCY | 2 cut(s) | 15, 145 |
| MhlI | GDGCHC | 4 cut(s) | 619, 982, 2500, 2587 |
| Mly113I | GGCGCC | 1 cut(s) | 1030 |
| MlyI | GAGTC | 4 cut(s) | 162, 1489, 2044, 2909 |
| MmeI | TCCRAC | 8 cut(s) | 283, 808, 2456, 2726, 2918, 2925, 3289, 3795 |
| Mph1103I | ATGCAT | 3 cut(s) | 179, 1350, 1710 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1260, 3564 |
| MslI | CAYNNNNRTG | 1 cut(s) | 4046 |
| MspA1I | CMGCKG | 4 cut(s) | 469, 1036, 1532, 2364 |
| MspCI | CTTAAG | 1 cut(s) | 2684 |
| MunI | CAATTG | 1 cut(s) | 2678 |
| MvaI | CCWGG | 7 cut(s) | 41, 556, 1617, 1653, 2040, 2174, 3827 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 330, 1175, 2365, 3255, 3749, 3881 |
| NarI | GGCGCC | 1 cut(s) | 1030 |
| NciI | CCSGG | 6 cut(s) | 132, 294, 497, 1365, 3183, 3184 |
| NcoI | CCATGG | 1 cut(s) | 3639 |
| NdeI | CATATG | 2 cut(s) | 2074, 4047 |
| NmuCI | GTSAC | 7 cut(s) | 419, 640, 2474, 2891, 3134, 3215, 3886 |
| NsbI | TGCGCA | 2 cut(s) | 1824, 2876 |
| NsiI | ATGCAT | 3 cut(s) | 179, 1350, 1710 |
| NspI | RCATGY | 3 cut(s) | 2609, 3216, 3317 |
| PaeI | GCATGC | 1 cut(s) | 2609 |
| PaeR7I | CTCGAG | 1 cut(s) | 140 |
| PagI | TCATGA | 1 cut(s) | 604 |
| PceI | AGGCCT | 2 cut(s) | 1543, 1977 |
| PciI | ACATGT | 1 cut(s) | 3313 |
| PciSI | GCTCTTC | 1 cut(s) | 987 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1260, 3564 |
| PfoI | TCCNGGA | 1 cut(s) | 495 |
| PinAI | ACCGGT | 2 cut(s) | 700, 3592 |
| PleI | GAGTC | 4 cut(s) | 161, 1489, 2043, 2908 |
| PluTI | GGCGCC | 1 cut(s) | 1033 |
| PpsI | GAGTC | 4 cut(s) | 161, 1489, 2043, 2908 |
| PpuMI | RGGWCCY | 2 cut(s) | 367, 1936 |
| PscI | ACATGT | 1 cut(s) | 3313 |
| Psp124BI | GAGCTC | 2 cut(s) | 982, 2587 |
| Psp1406I | AACGTT | 2 cut(s) | 580, 3663 |
| Psp5II | RGGWCCY | 2 cut(s) | 367, 1936 |
| Psp6I | CCWGG | 7 cut(s) | 39, 554, 1615, 1651, 2038, 2172, 3825 |
| PspEI | GGTNACC | 2 cut(s) | 3134, 3595 |
| PspGI | CCWGG | 7 cut(s) | 39, 554, 1615, 1651, 2038, 2172, 3825 |
| PspPPI | RGGWCCY | 2 cut(s) | 367, 1936 |
| PstI | CTGCAG | 1 cut(s) | 1237 |
| PsuI | RGATCY | 2 cut(s) | 15, 145 |
| PvuII | CAGCTG | 2 cut(s) | 1532, 2364 |
| RsaI | GTAC | 4 cut(s) | 253, 1891, 3148, 3544 |
| RsaNI | GTAC | 4 cut(s) | 252, 1890, 3147, 3543 |
| RseI | CAYNNNNRTG | 1 cut(s) | 4046 |
| Rsr2I | CGGWCCG | 1 cut(s) | 128 |
| RsrII | CGGWCCG | 1 cut(s) | 128 |
| SacI | GAGCTC | 2 cut(s) | 982, 2587 |
| SapI | GCTCTTC | 1 cut(s) | 987 |
| ScaI | AGTACT | 1 cut(s) | 3148 |
| SchI | GAGTC | 4 cut(s) | 162, 1489, 2044, 2909 |
| SduI | GDGCHC | 4 cut(s) | 619, 982, 2500, 2587 |
| SfcI | CTRYAG | 3 cut(s) | 1233, 1896, 3966 |
| SfoI | GGCGCC | 1 cut(s) | 1031 |
| Sfr274I | CTCGAG | 1 cut(s) | 140 |
| SinI | GGWCC | 9 cut(s) | 128, 367, 586, 792, 1066, 1367, 1936, 3630, 3898 |
| SlaI | CTCGAG | 1 cut(s) | 140 |
| SmaI | CCCGGG | 1 cut(s) | 3184 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 4046 |
| SmlI | CTYRAG | 6 cut(s) | 140, 1745, 2123, 2380, 2421, 2684 |
| SmoI | CTYRAG | 6 cut(s) | 140, 1745, 2123, 2380, 2421, 2684 |
| SphI | GCATGC | 1 cut(s) | 2609 |
| SseBI | AGGCCT | 2 cut(s) | 1543, 1977 |
| SsiI | CCGC | 6 cut(s) | 459, 469, 1036, 1319, 1436, 2723 |
| SspDI | GGCGCC | 1 cut(s) | 1029 |
| SspI | AATATT | 2 cut(s) | 2857, 3847 |
| SstI | GAGCTC | 2 cut(s) | 982, 2587 |
| StuI | AGGCCT | 2 cut(s) | 1543, 1977 |
| StyI | CCWWGG | 3 cut(s) | 716, 1011, 3639 |
| TaaI | ACNGT | 9 cut(s) | 280, 478, 515, 566, 1070, 1843, 1864, 2779, 2883 |
| TaiI | ACGT | 4 cut(s) | 290, 583, 1111, 3666 |
| TaqI | TCGA | 7 cut(s) | 74, 113, 141, 156, 273, 547, 738 |
| TatI | WGTACW | 2 cut(s) | 3146, 3542 |
| TauI | GCSGC | 1 cut(s) | 462 |
| TscAI | CASTG | 7 cut(s) | 283, 1141, 1869, 2022, 2191, 2546, 2849 |
| TseFI | GTSAC | 7 cut(s) | 419, 640, 2474, 2891, 3134, 3215, 3886 |
| Tsp45I | GTSAC | 7 cut(s) | 419, 640, 2474, 2891, 3134, 3215, 3886 |
| TspGWI | ACGGA | 4 cut(s) | 65, 615, 914, 936 |
| TspMI | CCCGGG | 1 cut(s) | 3182 |
| TspRI | CASTG | 7 cut(s) | 283, 1141, 1869, 2022, 2191, 2546, 2849 |
| Vha464I | CTTAAG | 1 cut(s) | 2684 |
| VneI | GTGCAC | 1 cut(s) | 615 |
| VpaK11BI | GGWCC | 9 cut(s) | 128, 367, 586, 792, 1066, 1367, 1936, 3630, 3898 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 3604 |
| XapI | RAATTY | 3 cut(s) | 1288, 2535, 3441 |
| XbaI | TCTAGA | 1 cut(s) | 1040 |
| XceI | RCATGY | 3 cut(s) | 2609, 3216, 3317 |
| XhoI | CTCGAG | 1 cut(s) | 140 |
| XmaI | CCCGGG | 1 cut(s) | 3182 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1260, 3564 |
| ZrmI | AGTACT | 1 cut(s) | 3148 |
| Zsp2I | ATGCAT | 3 cut(s) | 179, 1350, 1710 |