Rmu_sc0001782.1_g000035

Protein of unknown function (DUF295)

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001782.1
OG0000064
Physical Location & Seq
Forward (+)
179322 .. 181095
1774 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001782.1_g000035.1.cds

Sequence Viewer

Length: 1368 bp
ctgtcggcaaaattggaggacctttcctatcggcaactacagccaccggagattgaaggaccgcaagccaacgccgtccaccggcagcagtcgaaaaggaacatggctgctaccttccgcaaacaactattggcagactggtctagtcttcctcatgtcattctctcagagattctggataagttgttggaaccaactgaccatgttcgttttgctgccgtttgcaaggaatggcatgctctcgcaacagactataaccacacaacccagcgttgttttaaggtgcatcccatgcttatgatcccttcagaatcccaaggaaagcgaaaactatacagcatctctgagcaaaaagtctacaacaactttgagttaccacaagcttgtaatagcactaagaggtgttgtggctcgagcaatgctcctggttggttggtcgcagtagatctactaggcgaacatcaactcagtacaactcttgtgaacgtgttcaaaagagaagtgacgcccatttgtctacctccattgcatttcaatgcccagactcattggttcagggttttctccccaaaggttgtcttatcagctgatccaattgcgaatccagacaattatgtggttgtggcagtttatgatagagtttcaaggttcgctttcataaaaggaggacaaacagtctggacttaccttgaggtccgctccttctttactgatgctatattttataaaagaaaagtctatgcggtcggacaatggggacggattacctcgtttgatgttaatagcaagtcagtagaagaaaatttacttacacatggaggatatccgttttcatgttatgcgcataaggggtatcttgtggaaacaaccaaaggagacttgttgcatgttcgaagatttttgaaacagaaggatgtaccacgagatcactatttccattatgaggataatgagttctggaccgagagcttcaaggtttacaaggtggtgtttgatgagagggatgaatccattgtggagcaggttgagttaaagagtattggagatgaggctttgtttgttggtgacaatcactcgatgtgtgttttggcttcaaactttcctgggtgccagccaaattccatatactacactgacgatttgatagaacttggagaagtgcgattagttgatgatggatcaattgatatggacgacatcttcagtttagtcaaactagaggatgaaaccatctctaatggaccaagtgatatgggcatcttcaatttagaggatggaagcattacacaacattattctctaaatccttggcacaagaacatcccacctgctatctggatcatgccattgtttaatggattcggctaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295

Protein Analysis

455

Amino Acids

52.06

Weight (kDa)

5.79

Isoelectric Point (pI)

40.64

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 726
AarI CACCTGC 1 cut(s) 1336
Acc16I TGCGCA 1 cut(s) 843
Acc36I ACCTGC 2 cut(s) 1012, 1336
AccB1I GGYRCC 1 cut(s) 1107
AccBSI CCGCTC 1 cut(s) 699
AccI GTMKAC 2 cut(s) 357, 517
AciI CCGC 4 cut(s) 62, 118, 697, 743
AclWI GGATC 4 cut(s) 295, 584, 1186, 1346
AcsI RAATTY 2 cut(s) 802, 1117
AcuI CTGAAG 2 cut(s) 291, 1186
AcyI GRCGYC 1 cut(s) 506
AfaI GTAC 2 cut(s) 472, 918
AfiI CCNNNNNNNGG 2 cut(s) 81, 943
AflIII ACRYGT 1 cut(s) 486
AgsI TTSAA 8 cut(s) 56, 493, 535, 645, 904, 973, 1095, 1264
AhdI GACNNNNNGTC 1 cut(s) 674
AjnI CCWGG 2 cut(s) 424, 1102
AloI GAACNNNNNNTCC 2 cut(s) 938, 970
AluBI AGCT 3 cut(s) 383, 587, 969
AluI AGCT 3 cut(s) 383, 587, 969
Alw26I GTCTC 1 cut(s) 870
AlwI GGATC 4 cut(s) 295, 584, 1186, 1346
Ama87I CYCGRG 1 cut(s) 412
ApeKI GCWGC 3 cut(s) 85, 107, 215
ApoI RAATTY 2 cut(s) 802, 1117
Asp700I GAANNNNTTC 1 cut(s) 488
AspLEI GCGC 1 cut(s) 844
AspS9I GGNCC 5 cut(s) 19, 59, 694, 960, 1241
AsuHPI GGTGA 1 cut(s) 1076
AsuII TTCGAA 1 cut(s) 892
AvaI CYCGRG 1 cut(s) 412
AvaII GGWCC 5 cut(s) 19, 59, 694, 960, 1241
BanI GGYRCC 1 cut(s) 1107
BarI GAAGNNNNNNTAC 2 cut(s) 789, 821
BauI CACGAG 1 cut(s) 921
BbsI GAAGAC 1 cut(s) 140
BbvI GCAGC 3 cut(s) 94, 97, 202
BccI CCATC 3 cut(s) 1169, 1238, 1268
BceAI ACGGC 2 cut(s) 59, 203
BciT130I CCWGG 2 cut(s) 426, 1104
BcoDI GTCTC 1 cut(s) 870
BfaI CTAG 3 cut(s) 144, 452, 1217
BfmI CTRYAG 1 cut(s) 38
BfuAI ACCTGC 2 cut(s) 1012, 1336
BglII AGATCT 1 cut(s) 445
BisI GCNGC 3 cut(s) 86, 108, 216
BlsI GCNGC 3 cut(s) 87, 109, 217
Bme1390I CCNGG 2 cut(s) 426, 1104
Bme18I GGWCC 5 cut(s) 19, 59, 694, 960, 1241
BmeRI GACNNNNNGTC 1 cut(s) 674
BmeT110I CYCGRG 1 cut(s) 412
BmgT120I GGNCC 5 cut(s) 19, 59, 694, 960, 1241
BmiI GGNNCC 2 cut(s) 192, 1109
BmrFI CCNGG 2 cut(s) 426, 1104
BmsI GCATC 4 cut(s) 295, 348, 703, 1266
BpiI GAAGAC 1 cut(s) 140
BplI GAGNNNNNCTC 4 cut(s) 406, 438, 683, 715
Bpu14I TTCGAA 1 cut(s) 892
BpuEI CTTGAG 1 cut(s) 710
BsaHI GRCGYC 1 cut(s) 506
BsaJI CCNNGG 3 cut(s) 316, 1103, 1307
BsaWI WCCGGW 1 cut(s) 46
Bsc4I CCNNNNNNNGG 2 cut(s) 81, 943
Bse118I RCCGGY 1 cut(s) 81
Bse1I ACTGG 1 cut(s) 143
Bse3DI GCAATG 2 cut(s) 424, 524
BseBI CCWGG 2 cut(s) 426, 1104
BseDI CCNNGG 3 cut(s) 316, 1103, 1307
BseGI GGATG 6 cut(s) 286, 919, 1009, 1228, 1279, 1320
BseLI CCNNNNNNNGG 2 cut(s) 81, 943
BseMI GCAATG 2 cut(s) 424, 524
BseMII CTCAG 3 cut(s) 180, 336, 481
BseNI ACTGG 1 cut(s) 143
BseXI GCAGC 3 cut(s) 94, 97, 202
BseYI CCCAGC 1 cut(s) 267
Bsh1285I CGRYCG 1 cut(s) 747
BshNI GGYRCC 1 cut(s) 1107
BsiEI CGRYCG 1 cut(s) 747
BsiHKCI CYCGRG 1 cut(s) 412
BsiSI CCGG 2 cut(s) 47, 82
BslFI GGGAC 1 cut(s) 771
BslI CCNNNNNNNGG 2 cut(s) 81, 943
BsmAI GTCTC 1 cut(s) 870
BsmFI GGGAC 1 cut(s) 771
BsoBI CYCGRG 1 cut(s) 412
Bsp119I TTCGAA 1 cut(s) 892
Bsp143I GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
BspACI CCGC 4 cut(s) 62, 118, 697, 743
BspCNI CTCAG 3 cut(s) 179, 337, 480
BspLI GGNNCC 2 cut(s) 192, 1109
BspMI ACCTGC 2 cut(s) 1012, 1336
BspPI GGATC 4 cut(s) 295, 584, 1186, 1346
BspT104I TTCGAA 1 cut(s) 892
BspT107I GGYRCC 1 cut(s) 1107
BsrBI CCGCTC 1 cut(s) 699
BsrDI GCAATG 2 cut(s) 424, 524
BsrFI RCCGGY 1 cut(s) 81
BsrI ACTGG 1 cut(s) 143
BssAI RCCGGY 1 cut(s) 81
BssECI CCNNGG 3 cut(s) 316, 1103, 1307
BssMI GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
BssNI GRCGYC 1 cut(s) 506
BssSI CACGAG 1 cut(s) 921
BssT1I CCWWGG 2 cut(s) 316, 1307
Bst2BI CACGAG 1 cut(s) 921
Bst2UI CCWGG 2 cut(s) 426, 1104
Bst4CI ACNGT 1 cut(s) 676
BstACI GRCGYC 1 cut(s) 506
BstAPI GCANNNNNTGC 1 cut(s) 292
BstBI TTCGAA 1 cut(s) 892
BstC8I GCNNGC 3 cut(s) 66, 237, 1112
BstDEI CTNAG 4 cut(s) 166, 345, 396, 467
BstF5I GGATG 6 cut(s) 286, 919, 1009, 1228, 1279, 1320
BstHHI GCGC 1 cut(s) 844
BstKTI GATC 6 cut(s) 303, 448, 592, 928, 1181, 1341
BstMAI GTCTC 1 cut(s) 870
BstMBI GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
BstMCI CGRYCG 1 cut(s) 747
BstMWI GCNNNNNNNGC 2 cut(s) 40, 292
BstNI CCWGG 2 cut(s) 426, 1104
BstNSI RCATGY 2 cut(s) 239, 890
BstSCI CCNGG 2 cut(s) 424, 1102
BstSFI CTRYAG 1 cut(s) 38
BstV1I GCAGC 3 cut(s) 94, 97, 202
BstV2I GAAGAC 1 cut(s) 140
BstX2I RGATCY 1 cut(s) 445
BstYI RGATCY 1 cut(s) 445
BtsCI GGATG 6 cut(s) 286, 919, 1009, 1228, 1279, 1320
BtsIMutI CAGTG 1 cut(s) 1131
BveI ACCTGC 2 cut(s) 1012, 1336
Cac8I GCNNGC 3 cut(s) 66, 237, 1112
CfoI GCGC 1 cut(s) 844
Cfr10I RCCGGY 1 cut(s) 81
Cfr13I GGNCC 5 cut(s) 19, 59, 694, 960, 1241
CseI GACGC 1 cut(s) 514
Csp6I GTAC 2 cut(s) 471, 917
CviAII CATG 9 cut(s) 103, 155, 203, 236, 292, 815, 834, 887, 1342
CviQI GTAC 2 cut(s) 471, 917
DdeI CTNAG 4 cut(s) 166, 345, 396, 467
DpnI GATC 6 cut(s) 302, 447, 591, 927, 1180, 1340
DpnII GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
DriI GACNNNNNGTC 1 cut(s) 674
Eam1105I GACNNNNNGTC 1 cut(s) 674
Eco130I CCWWGG 2 cut(s) 316, 1307
Eco32I GATATC 1 cut(s) 824
Eco47I GGWCC 5 cut(s) 19, 59, 694, 960, 1241
Eco57I CTGAAG 2 cut(s) 291, 1186
Eco88I CYCGRG 1 cut(s) 412
EcoO109I RGGNCCY 1 cut(s) 19
EcoRII CCWGG 2 cut(s) 424, 1102
EcoRV GATATC 1 cut(s) 824
EcoT14I CCWWGG 2 cut(s) 316, 1307
ErhI CCWWGG 2 cut(s) 316, 1307
FaeI CATG 9 cut(s) 106, 158, 206, 239, 295, 818, 837, 890, 1345
FalI AAGNNNNNCTT 4 cut(s) 563, 595, 637, 669
FaqI GGGAC 1 cut(s) 771
FatI CATG 9 cut(s) 102, 154, 202, 235, 291, 814, 833, 886, 1341
FblI GTMKAC 2 cut(s) 357, 517
Fnu4HI GCNGC 3 cut(s) 86, 108, 216
FokI GGATG 6 cut(s) 273, 926, 1016, 1235, 1286, 1307
Fsp4HI GCNGC 3 cut(s) 86, 108, 216
FspAI RTGCGCAY 1 cut(s) 843
FspBI CTAG 3 cut(s) 144, 452, 1217
FspI TGCGCA 1 cut(s) 843
GlaI GCGC 1 cut(s) 843
GluI GCNGC 3 cut(s) 86, 108, 216
GsaI CCCAGC 1 cut(s) 271
HapII CCGG 2 cut(s) 47, 82
HgaI GACGC 1 cut(s) 514
HhaI GCGC 1 cut(s) 844
Hin1I GRCGYC 1 cut(s) 506
Hin1II CATG 9 cut(s) 106, 158, 206, 239, 295, 818, 837, 890, 1345
Hin6I GCGC 1 cut(s) 842
HinP1I GCGC 1 cut(s) 842
HindIII AAGCTT 1 cut(s) 381
HinfI GANTC 6 cut(s) 172, 311, 544, 601, 1007, 1359
HpaII CCGG 2 cut(s) 47, 82
HphI GGTGA 1 cut(s) 1076
Hpy166II GTNNAC 5 cut(s) 79, 358, 484, 518, 979
Hpy188I TCNGA 4 cut(s) 169, 310, 346, 749
Hpy188III TCNNGA 5 cut(s) 176, 605, 679, 958, 1336
Hpy8I GTNNAC 5 cut(s) 79, 358, 484, 518, 979
HpyAV CCTTC 5 cut(s) 50, 124, 315, 712, 904
HpyCH4III ACNGT 1 cut(s) 676
HpyCH4IV ACGT 1 cut(s) 486
HpyCH4V TGCA 4 cut(s) 225, 286, 529, 886
HpyF10VI GCNNNNNNNGC 2 cut(s) 40, 292
HpyF3I CTNAG 4 cut(s) 166, 345, 396, 467
HpySE526I ACGT 1 cut(s) 486
Hsp92I GRCGYC 1 cut(s) 506
Hsp92II CATG 9 cut(s) 106, 158, 206, 239, 295, 818, 837, 890, 1345
HspAI GCGC 1 cut(s) 842
Kzo9I GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
LmnI GCTCC 3 cut(s) 427, 704, 1018
Lsp1109I GCAGC 3 cut(s) 94, 97, 202
LweI GCATC 4 cut(s) 295, 348, 703, 1266
MaeI CTAG 3 cut(s) 144, 452, 1217
MaeII ACGT 1 cut(s) 486
MaeIII GTNAC 3 cut(s) 372, 502, 1064
MalI GATC 6 cut(s) 302, 447, 591, 927, 1180, 1340
MbiI CCGCTC 1 cut(s) 699
MboI GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
MboII GAAGA 5 cut(s) 140, 809, 906, 1192, 1252
MfeI CAATTG 2 cut(s) 594, 1182
MflI RGATCY 1 cut(s) 445
MluCI AATT 7 cut(s) 11, 594, 610, 802, 1117, 1182, 1264
MlyI GAGTC 1 cut(s) 538
MmeI TCCRAC 2 cut(s) 168, 727
MroXI GAANNNNTTC 1 cut(s) 488
MseI TTAA 4 cut(s) 279, 780, 1031, 1353
MslI CAYNNNNRTG 2 cut(s) 296, 534
MspA1I CMGCKG 1 cut(s) 587
MspI CCGG 2 cut(s) 47, 82
MspR9I CCNGG 2 cut(s) 426, 1104
MunI CAATTG 2 cut(s) 594, 1182
MvaI CCWGG 2 cut(s) 426, 1104
MwoI GCNNNNNNNGC 2 cut(s) 40, 292
NdeII GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
NlaIII CATG 9 cut(s) 106, 158, 206, 239, 295, 818, 837, 890, 1345
NlaIV GGNNCC 2 cut(s) 192, 1109
NmuCI GTSAC 2 cut(s) 502, 1064
NsbI TGCGCA 1 cut(s) 843
NspI RCATGY 2 cut(s) 239, 890
NspV TTCGAA 1 cut(s) 892
PaeI GCATGC 1 cut(s) 239
PaeR7I CTCGAG 1 cut(s) 412
PaqCI CACCTGC 1 cut(s) 1336
PdmI GAANNNNTTC 1 cut(s) 488
PfeI GAWTC 5 cut(s) 172, 311, 601, 1007, 1359
PkrI GCNGC 3 cut(s) 87, 109, 217
PleI GAGTC 1 cut(s) 538
PpsI GAGTC 1 cut(s) 538
PpuMI RGGWCCY 1 cut(s) 19
PsiI TTATAA 1 cut(s) 726
Psp5II RGGWCCY 1 cut(s) 19
Psp6I CCWGG 2 cut(s) 424, 1102
PspFI CCCAGC 1 cut(s) 267
PspGI CCWGG 2 cut(s) 424, 1102
PspN4I GGNNCC 2 cut(s) 192, 1109
PspPI GGNCC 5 cut(s) 19, 59, 694, 960, 1241
PspPPI RGGWCCY 1 cut(s) 19
PspXI VCTCGAGB 1 cut(s) 412
PsuI RGATCY 1 cut(s) 445
PvuII CAGCTG 1 cut(s) 587
RsaI GTAC 2 cut(s) 472, 918
RsaNI GTAC 2 cut(s) 471, 917
RseI CAYNNNNRTG 2 cut(s) 296, 534
SaqAI TTAA 4 cut(s) 279, 780, 1031, 1353
SatI GCNGC 3 cut(s) 86, 108, 216
Sau3AI GATC 6 cut(s) 300, 445, 589, 925, 1178, 1338
Sau96I GGNCC 5 cut(s) 19, 59, 694, 960, 1241
SchI GAGTC 1 cut(s) 538
ScrFI CCNGG 2 cut(s) 426, 1104
SfaNI GCATC 4 cut(s) 295, 348, 703, 1266
SfcI CTRYAG 1 cut(s) 38
Sfr274I CTCGAG 1 cut(s) 412
SfuI TTCGAA 1 cut(s) 892
SinI GGWCC 5 cut(s) 19, 59, 694, 960, 1241
SlaI CTCGAG 1 cut(s) 412
SmiMI CAYNNNNRTG 2 cut(s) 296, 534
SmlI CTYRAG 2 cut(s) 412, 689
SmoI CTYRAG 2 cut(s) 412, 689
SphI GCATGC 1 cut(s) 239
Sse9I AATT 7 cut(s) 11, 594, 610, 802, 1117, 1182, 1264
SsiI CCGC 4 cut(s) 62, 118, 697, 743
SspMI CTAG 3 cut(s) 144, 452, 1217
StyD4I CCNGG 2 cut(s) 424, 1102
StyI CCWWGG 2 cut(s) 316, 1307
TaaI ACNGT 1 cut(s) 676
TaiI ACGT 1 cut(s) 489
TaqI TCGA 4 cut(s) 92, 413, 892, 1076
TaqII GACCGA 1 cut(s) 977
TasI AATT 7 cut(s) 11, 594, 610, 802, 1117, 1182, 1264
TatI WGTACW 1 cut(s) 470
TfiI GAWTC 5 cut(s) 172, 311, 601, 1007, 1359
Tru1I TTAA 4 cut(s) 279, 780, 1031, 1353
Tru9I TTAA 4 cut(s) 279, 780, 1031, 1353
TscAI CASTG 1 cut(s) 1138
TseFI GTSAC 2 cut(s) 502, 1064
TseI GCWGC 3 cut(s) 85, 107, 215
Tsp45I GTSAC 2 cut(s) 502, 1064
TspDTI ATGAA 4 cut(s) 646, 822, 1020, 1239
TspGWI ACGGA 2 cut(s) 775, 816
TspRI CASTG 1 cut(s) 1138
VpaK11BI GGWCC 5 cut(s) 19, 59, 694, 960, 1241
XapI RAATTY 2 cut(s) 802, 1117
XceI RCATGY 2 cut(s) 239, 890
XcmI CCANNNNNNNNNTGG 1 cut(s) 1332
XhoI CTCGAG 1 cut(s) 412
XmiI GTMKAC 2 cut(s) 357, 517
XmnI GAANNNNTTC 1 cut(s) 488
XspI CTAG 3 cut(s) 144, 452, 1217
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.