FvH4_4g29670

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb4
OG0000064
Physical Location & Seq
Reverse (-)
29700884 .. 29703719
2836 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_4g29670.t2

Sequence Viewer

Length: 1362 bp
ATGGCTGTTGTTGGCAAATCTCCAGTGAAACAGGTAGGGTATCGCAATCCCTGTACCGACGTCAAAGACCGAAGCTCCATGATTGAGGTCCAGCCTGGTAATAACAAGAACAAGAGAAGTTTGGAGTGTGAAATCCCTCCGGATAGGTCAACTAAGAAGCCCCGGCGTTCAGATAAGGATTTTGCCTTGAACACTAGTTACACATCAGTATCTGAATGGGCGAGTCTTCCTATGGACATTTTCTTTCTAACGTTGGATAAGTTGTTCGAACTCATCGACCATGTTCGTTTGGCTGTCGTTTGCAAGCATTGGAACGATGTTTCGAAAGCGCATAATCGTACAACTCAACGCTGGTGTAAGGTACTTCCCATGCTCATGATCCCCTTCGGTAGCCGAACAAAGCGAATGGTTTGTAGCCTTTCTGAAGGAAAAATCTATACAAATGTTCAACTACCGGTGCCTTATGATAAGAGGTGCAGTGGCTCCAGTCATGGTTGGTTGGCCACAGCGGATGAAACTTTCGCTATAACTCTTTTGAATCCTTTCAGAAAGGCAGAGGCCATTCATTTGCCTCCCTTGGTAACCCCTTATGATCTCCCAGGCTGCCAAAGTGAGTTGCAGAAGCATCGGGATGAGTTGAAGAAGCAGTACCACTATTATGTCCGTAAGGTTATACTATCAGCTGATCCGTCTTCAAATCCGAATAACTACGTGGTTGTGGCAATCTACGACAATTGTTGCAGGTTGGCTTTCATTAGAGCAGGACAAAGAGATTGGACTTACCTCGAGGAACCATATATGTTTTCTGATGCTATTTTTCACAGAAATGAAATCTATGCAGTTGGACTAGGGGGAATAATAGCTTCAGTTGATATCAACAGTAGTGATGATCCTTCAAGCCACCCAAAGGCAATTATACGTACACCTTTAAGACCAATGGTACACCCGGTTTTCCCATACAAAGCGGATAAGGCATATCTTGTTGAATCAAGCAATGGAGACTTGCTGCATGTTCGAAAGTTCTTGAAACCAAAGGAAGGTGTTGATCAAAAGCTGGGGGTTGTCAATTTTGTGGTGTACAAGGTGTTGTTCAGTGACAAAGATGGGAGCATCGTGAAGCAGAATGTGGTGGATAGCATTGGGGATGATGCTTTGTTCTTGGGTGATAATCATTCCATGACTGTTTTGGCTTCAAACTTTCCTAGGTGCCAACCAAATTCCATTTACTTCACAAATGACATTTGGAATGGTGGTATTGGGATCTTCAGTTTAGCAAACAAAACAGTTACACAACTCTACCGGCCTCAAAATCCCATCCCACCTGCGATATGGATTGTGCCACCAAACAATGGTCTTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

454

Amino Acids

51.15

Weight (kDa)

8.94

Isoelectric Point (pI)

38.32

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Beta-prop_KIB1-4 PF03478 61 - 346 5e-53 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1330
AatII GACGTC 1 cut(s) 63
AbsI CCTCGAGG 1 cut(s) 785
Acc36I ACCTGC 2 cut(s) 732, 1330
AccB1I GGYRCC 2 cut(s) 457, 1206
AccB7I CCANNNNNTGG 1 cut(s) 1349
AccIII TCCGGA 1 cut(s) 139
AciI CCGC 2 cut(s) 509, 965
AclI AACGTT 1 cut(s) 251
AclWI GGATC 4 cut(s) 373, 680, 884, 1268
AcoI YGGCCR 1 cut(s) 501
AcsI RAATTY 1 cut(s) 1216
AcuI CTGAAG 3 cut(s) 444, 849, 1249
AcyI GRCGYC 1 cut(s) 60
AfaI GTAC 7 cut(s) 55, 340, 363, 650, 922, 942, 1079
AfiI CCNNNNNNNGG 3 cut(s) 907, 1037, 1349
AgeI ACCGGT 1 cut(s) 454
AgsI TTSAA 9 cut(s) 190, 449, 538, 640, 696, 897, 986, 1027, 1194
AhlI ACTAGT 1 cut(s) 194
AjnI CCWGG 2 cut(s) 94, 598
AloI GAACNNNNNNTCC 2 cut(s) 248, 280
AluBI AGCT 4 cut(s) 75, 683, 863, 1054
AluI AGCT 4 cut(s) 75, 683, 863, 1054
Alw26I GTCTC 1 cut(s) 993
AlwI GGATC 4 cut(s) 373, 680, 884, 1268
AlwNI CAGNNNCTG 1 cut(s) 212
Ama87I CYCGRG 1 cut(s) 785
Aor13HI TCCGGA 1 cut(s) 139
AoxI GGCC 3 cut(s) 501, 558, 1301
ApeKI GCWGC 2 cut(s) 603, 1006
ApoI RAATTY 1 cut(s) 1216
AsiGI ACCGGT 1 cut(s) 454
Asp700I GAANNNNTTC 1 cut(s) 542
AspA2I CCTAGG 1 cut(s) 1202
AspLEI GCGC 1 cut(s) 331
AspS9I GGNCC 1 cut(s) 88
AsuC2I CCSGG 2 cut(s) 163, 947
AsuHPI GGTGA 1 cut(s) 1175
AsuII TTCGAA 3 cut(s) 267, 323, 1015
AvaI CYCGRG 1 cut(s) 785
AvaII GGWCC 1 cut(s) 88
AvrII CCTAGG 1 cut(s) 1202
BaeI ACNNNNGTAYC 2 cut(s) 192, 225
BalI TGGCCA 1 cut(s) 503
BanI GGYRCC 2 cut(s) 457, 1206
BarI GAAGNNNNNNTAC 2 cut(s) 632, 664
BbsI GAAGAC 2 cut(s) 218, 684
BbvI GCAGC 2 cut(s) 590, 993
BccI CCATC 2 cut(s) 1097, 1322
BcgI CGANNNNNNTGC 2 cut(s) 608, 642
BciT130I CCWGG 2 cut(s) 96, 600
BclI TGATCA 1 cut(s) 1045
BcnI CCSGG 2 cut(s) 163, 947
BcoDI GTCTC 1 cut(s) 993
BcuI ACTAGT 1 cut(s) 194
BfaI CTAG 4 cut(s) 195, 848, 1203, 1360
BfuAI ACCTGC 2 cut(s) 732, 1330
BisI GCNGC 2 cut(s) 604, 1007
BlnI CCTAGG 1 cut(s) 1202
BlsI GCNGC 2 cut(s) 605, 1008
Bme1390I CCNGG 4 cut(s) 96, 163, 600, 947
Bme18I GGWCC 1 cut(s) 88
BmeT110I CYCGRG 1 cut(s) 785
BmgT120I GGNCC 1 cut(s) 88
BmiI GGNNCC 4 cut(s) 459, 484, 792, 1208
BmrFI CCNGG 4 cut(s) 96, 163, 600, 947
BmsI GCATC 4 cut(s) 634, 799, 1119, 1138
BpiI GAAGAC 2 cut(s) 218, 684
BpmI CTGGAG 2 cut(s) 6, 469
Bpu14I TTCGAA 3 cut(s) 267, 323, 1015
BpuMI CCSGG 2 cut(s) 163, 947
BsaAI YACGTR 2 cut(s) 712, 920
BsaHI GRCGYC 1 cut(s) 60
BsaJI CCNNGG 4 cut(s) 161, 576, 598, 1202
BsaWI WCCGGW 2 cut(s) 139, 454
BsaXI ACNNNNNCTCC 2 cut(s) 59, 89
Bsc4I CCNNNNNNNGG 3 cut(s) 907, 1037, 1349
Bse118I RCCGGY 2 cut(s) 454, 1299
Bse1I ACTGG 2 cut(s) 23, 486
Bse3DI GCAATG 1 cut(s) 1000
BseAI TCCGGA 1 cut(s) 139
BseBI CCWGG 2 cut(s) 96, 600
BseDI CCNNGG 4 cut(s) 161, 576, 598, 1202
BseGI GGATG 4 cut(s) 517, 637, 1150, 1314
BseLI CCNNNNNNNGG 3 cut(s) 907, 1037, 1349
BseMI GCAATG 1 cut(s) 1000
BseNI ACTGG 2 cut(s) 23, 486
BseXI GCAGC 2 cut(s) 590, 993
BseYI CCCAGC 1 cut(s) 1054
BsgI GTGCAG 1 cut(s) 496
BshFI GGCC 3 cut(s) 503, 560, 1303
BshNI GGYRCC 2 cut(s) 457, 1206
BshTI ACCGGT 1 cut(s) 454
BsiHKCI CYCGRG 1 cut(s) 785
BsiSI CCGG 5 cut(s) 140, 163, 455, 947, 1300
BslI CCNNNNNNNGG 3 cut(s) 907, 1037, 1349
BsmAI GTCTC 1 cut(s) 993
BsnI GGCC 3 cut(s) 503, 560, 1303
BsoBI CYCGRG 1 cut(s) 785
Bsp119I TTCGAA 3 cut(s) 267, 323, 1015
Bsp13I TCCGGA 1 cut(s) 139
Bsp1407I TGTACA 1 cut(s) 1077
Bsp143I GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
BspACI CCGC 2 cut(s) 509, 965
BspANI GGCC 3 cut(s) 503, 560, 1303
BspEI TCCGGA 1 cut(s) 139
BspHI TCATGA 1 cut(s) 375
BspLI GGNNCC 4 cut(s) 459, 484, 792, 1208
BspMI ACCTGC 2 cut(s) 732, 1330
BspPI GGATC 4 cut(s) 373, 680, 884, 1268
BspT104I TTCGAA 3 cut(s) 267, 323, 1015
BspT107I GGYRCC 2 cut(s) 457, 1206
BsrDI GCAATG 1 cut(s) 1000
BsrFI RCCGGY 2 cut(s) 454, 1299
BsrGI TGTACA 1 cut(s) 1077
BsrI ACTGG 2 cut(s) 23, 486
BssAI RCCGGY 2 cut(s) 454, 1299
BssECI CCNNGG 4 cut(s) 161, 576, 598, 1202
BssMI GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
BssNI GRCGYC 1 cut(s) 60
BssT1I CCWWGG 2 cut(s) 576, 1202
Bst2UI CCWGG 2 cut(s) 96, 600
Bst4CI ACNGT 3 cut(s) 881, 1183, 1285
BstACI GRCGYC 1 cut(s) 60
BstAUI TGTACA 1 cut(s) 1077
BstBAI YACGTR 2 cut(s) 712, 920
BstBI TTCGAA 3 cut(s) 267, 323, 1015
BstC8I GCNNGC 1 cut(s) 305
BstDEI CTNAG 1 cut(s) 153
BstEII GGTNACC 1 cut(s) 580
BstF5I GGATG 4 cut(s) 517, 637, 1150, 1314
BstHHI GCGC 1 cut(s) 331
BstKTI GATC 6 cut(s) 381, 595, 688, 892, 1048, 1263
BstMAI GTCTC 1 cut(s) 993
BstMBI GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
BstMWI GCNNNNNNNGC 1 cut(s) 971
BstNI CCWGG 2 cut(s) 96, 600
BstNSI RCATGY 1 cut(s) 1013
BstPI GGTNACC 1 cut(s) 580
BstSCI CCNGG 4 cut(s) 94, 161, 598, 945
BstSNI TACGTA 1 cut(s) 920
BstV1I GCAGC 2 cut(s) 590, 993
BstV2I GAAGAC 2 cut(s) 218, 684
BstX2I RGATCY 1 cut(s) 1260
BstYI RGATCY 1 cut(s) 1260
BsuRI GGCC 3 cut(s) 503, 560, 1303
BtsCI GGATG 4 cut(s) 517, 637, 1150, 1314
BtsI GCAGTG 1 cut(s) 484
BtsIMutI CAGTG 3 cut(s) 30, 484, 1099
BveI ACCTGC 2 cut(s) 732, 1330
Cac8I GCNNGC 1 cut(s) 305
CaiI CAGNNNCTG 1 cut(s) 212
CciI TCATGA 1 cut(s) 375
CfoI GCGC 1 cut(s) 331
Cfr10I RCCGGY 2 cut(s) 454, 1299
Cfr13I GGNCC 1 cut(s) 88
Csp6I GTAC 7 cut(s) 54, 339, 362, 649, 921, 941, 1078
CspAI ACCGGT 1 cut(s) 454
CviAII CATG 7 cut(s) 79, 281, 370, 376, 491, 1010, 1177
CviQI GTAC 7 cut(s) 54, 339, 362, 649, 921, 941, 1078
DdeI CTNAG 1 cut(s) 153
DpnI GATC 6 cut(s) 380, 594, 687, 891, 1047, 1262
DpnII GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
EaeI YGGCCR 1 cut(s) 501
Eco105I TACGTA 1 cut(s) 920
Eco130I CCWWGG 2 cut(s) 576, 1202
Eco32I GATATC 1 cut(s) 874
Eco47I GGWCC 1 cut(s) 88
Eco57I CTGAAG 3 cut(s) 444, 849, 1249
Eco88I CYCGRG 1 cut(s) 785
Eco91I GGTNACC 1 cut(s) 580
EcoO65I GGTNACC 1 cut(s) 580
EcoRII CCWGG 2 cut(s) 94, 598
EcoRV GATATC 1 cut(s) 874
EcoT14I CCWWGG 2 cut(s) 576, 1202
ErhI CCWWGG 2 cut(s) 576, 1202
FaeI CATG 7 cut(s) 82, 284, 373, 379, 494, 1013, 1180
FatI CATG 7 cut(s) 78, 280, 369, 375, 490, 1009, 1176
FbaI TGATCA 1 cut(s) 1045
Fnu4HI GCNGC 2 cut(s) 604, 1007
FokI GGATG 4 cut(s) 524, 644, 1157, 1301
Fsp4HI GCNGC 2 cut(s) 604, 1007
FspBI CTAG 4 cut(s) 195, 848, 1203, 1360
GlaI GCGC 1 cut(s) 330
GluI GCNGC 2 cut(s) 604, 1007
GsaI CCCAGC 1 cut(s) 1058
GsuI CTGGAG 2 cut(s) 6, 469
HaeIII GGCC 3 cut(s) 503, 560, 1303
HapII CCGG 5 cut(s) 140, 163, 455, 947, 1300
HhaI GCGC 1 cut(s) 331
Hin1I GRCGYC 1 cut(s) 60
Hin1II CATG 7 cut(s) 82, 284, 373, 379, 494, 1013, 1180
Hin6I GCGC 1 cut(s) 329
HinP1I GCGC 1 cut(s) 329
HincII GTYRAC 1 cut(s) 150
HindII GTYRAC 1 cut(s) 150
HinfI GANTC 3 cut(s) 223, 538, 986
HpaII CCGG 5 cut(s) 140, 163, 455, 947, 1300
HphI GGTGA 1 cut(s) 1175
Hpy166II GTNNAC 4 cut(s) 150, 923, 943, 1078
Hpy188I TCNGA 6 cut(s) 172, 214, 424, 548, 702, 808
Hpy188III TCNNGA 5 cut(s) 140, 376, 629, 1024, 1114
Hpy8I GTNNAC 4 cut(s) 150, 923, 943, 1078
Hpy99I CGWCG 1 cut(s) 62
HpyAV CCTTC 4 cut(s) 394, 419, 903, 1031
HpyCH4III ACNGT 3 cut(s) 881, 1183, 1285
HpyCH4IV ACGT 4 cut(s) 60, 251, 711, 919
HpyCH4V TGCA 6 cut(s) 303, 477, 619, 741, 839, 1009
HpyF10VI GCNNNNNNNGC 1 cut(s) 971
HpyF3I CTNAG 1 cut(s) 153
HpySE526I ACGT 4 cut(s) 60, 251, 711, 919
Hsp92I GRCGYC 1 cut(s) 60
Hsp92II CATG 7 cut(s) 82, 284, 373, 379, 494, 1013, 1180
HspAI GCGC 1 cut(s) 329
Kpn2I TCCGGA 1 cut(s) 139
Ksp22I TGATCA 1 cut(s) 1045
Kzo9I GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
LmnI GCTCC 3 cut(s) 80, 488, 1107
Lsp1109I GCAGC 2 cut(s) 590, 993
LweI GCATC 4 cut(s) 634, 799, 1119, 1138
MaeI CTAG 4 cut(s) 195, 848, 1203, 1360
MaeII ACGT 4 cut(s) 60, 251, 711, 919
MaeIII GTNAC 4 cut(s) 197, 580, 1094, 1285
MalI GATC 6 cut(s) 380, 594, 687, 891, 1047, 1262
MboI GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
MboII GAAGA 4 cut(s) 218, 652, 684, 1255
MfeI CAATTG 1 cut(s) 733
MflI RGATCY 1 cut(s) 1260
MlsI TGGCCA 1 cut(s) 503
MluCI AATT 4 cut(s) 733, 912, 1066, 1216
MluNI TGGCCA 1 cut(s) 503
MlyI GAGTC 1 cut(s) 232
MmeI TCCRAC 2 cut(s) 234, 823
MnlI CCTC 8 cut(s) 79, 147, 465, 550, 582, 781, 794, 1314
Mox20I TGGCCA 1 cut(s) 503
MroI TCCGGA 1 cut(s) 139
MroXI GAANNNNTTC 1 cut(s) 542
MscI TGGCCA 1 cut(s) 503
MseI TTAA 1 cut(s) 929
MslI CAYNNNNRTG 4 cut(s) 374, 630, 657, 825
Msp20I TGGCCA 1 cut(s) 503
MspA1I CMGCKG 2 cut(s) 509, 683
MspI CCGG 5 cut(s) 140, 163, 455, 947, 1300
MspR9I CCNGG 4 cut(s) 96, 163, 600, 947
MunI CAATTG 1 cut(s) 733
MvaI CCWGG 2 cut(s) 96, 600
MwoI GCNNNNNNNGC 1 cut(s) 971
NciI CCSGG 2 cut(s) 163, 947
NdeII GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
NlaIII CATG 7 cut(s) 82, 284, 373, 379, 494, 1013, 1180
NlaIV GGNNCC 4 cut(s) 459, 484, 792, 1208
NmuCI GTSAC 1 cut(s) 1094
NspI RCATGY 1 cut(s) 1013
NspV TTCGAA 3 cut(s) 267, 323, 1015
PaeR7I CTCGAG 1 cut(s) 785
PagI TCATGA 1 cut(s) 375
PaqCI CACCTGC 1 cut(s) 1330
PcsI WCGNNNNNNNCGW 1 cut(s) 273
PdmI GAANNNNTTC 1 cut(s) 542
PfeI GAWTC 2 cut(s) 538, 986
PflMI CCANNNNNTGG 1 cut(s) 1349
PinAI ACCGGT 1 cut(s) 454
PkrI GCNGC 2 cut(s) 605, 1008
PleI GAGTC 1 cut(s) 231
PpsI GAGTC 1 cut(s) 231
Ppu21I YACGTR 2 cut(s) 712, 920
Psp1406I AACGTT 1 cut(s) 251
Psp6I CCWGG 2 cut(s) 94, 598
PspEI GGTNACC 1 cut(s) 580
PspFI CCCAGC 1 cut(s) 1054
PspGI CCWGG 2 cut(s) 94, 598
PspN4I GGNNCC 4 cut(s) 459, 484, 792, 1208
PspPI GGNCC 1 cut(s) 88
PspXI VCTCGAGB 1 cut(s) 785
PsrI GAACNNNNNNTAC 2 cut(s) 182, 214
PstNI CAGNNNCTG 1 cut(s) 212
PsuI RGATCY 1 cut(s) 1260
PvuII CAGCTG 1 cut(s) 683
RsaI GTAC 7 cut(s) 55, 340, 363, 650, 922, 942, 1079
RsaNI GTAC 7 cut(s) 54, 339, 362, 649, 921, 941, 1078
RseI CAYNNNNRTG 4 cut(s) 374, 630, 657, 825
SaqAI TTAA 1 cut(s) 929
SatI GCNGC 2 cut(s) 604, 1007
Sau3AI GATC 6 cut(s) 378, 592, 685, 889, 1045, 1260
Sau96I GGNCC 1 cut(s) 88
SchI GAGTC 1 cut(s) 232
ScrFI CCNGG 4 cut(s) 96, 163, 600, 947
SfaNI GCATC 4 cut(s) 634, 799, 1119, 1138
Sfr274I CTCGAG 1 cut(s) 785
SfuI TTCGAA 3 cut(s) 267, 323, 1015
SinI GGWCC 1 cut(s) 88
SlaI CTCGAG 1 cut(s) 785
SmiMI CAYNNNNRTG 4 cut(s) 374, 630, 657, 825
SmlI CTYRAG 1 cut(s) 785
SmoI CTYRAG 1 cut(s) 785
SnaBI TACGTA 1 cut(s) 920
SpeI ACTAGT 1 cut(s) 194
Sse9I AATT 4 cut(s) 733, 912, 1066, 1216
SsiI CCGC 2 cut(s) 509, 965
SspMI CTAG 4 cut(s) 195, 848, 1203, 1360
StyD4I CCNGG 4 cut(s) 94, 161, 598, 945
StyI CCWWGG 2 cut(s) 576, 1202
TaaI ACNGT 3 cut(s) 881, 1183, 1285
TaiI ACGT 4 cut(s) 63, 254, 714, 922
TaqI TCGA 5 cut(s) 267, 276, 323, 786, 1015
TaqII GACCGA 1 cut(s) 84
TasI AATT 4 cut(s) 733, 912, 1066, 1216
TatI WGTACW 1 cut(s) 1077
TfiI GAWTC 2 cut(s) 538, 986
Tru1I TTAA 1 cut(s) 929
Tru9I TTAA 1 cut(s) 929
TscAI CASTG 3 cut(s) 30, 484, 1099
TseFI GTSAC 1 cut(s) 1094
TseI GCWGC 2 cut(s) 603, 1006
Tsp45I GTSAC 1 cut(s) 1094
TspDTI ATGAA 4 cut(s) 528, 554, 742, 843
TspGWI ACGGA 2 cut(s) 653, 678
TspRI CASTG 3 cut(s) 30, 484, 1099
Van91I CCANNNNNTGG 1 cut(s) 1349
VpaK11BI GGWCC 1 cut(s) 88
XapI RAATTY 1 cut(s) 1216
XceI RCATGY 1 cut(s) 1013
XcmI CCANNNNNNNNNTGG 2 cut(s) 1183, 1326
XhoI CTCGAG 1 cut(s) 785
XmaJI CCTAGG 1 cut(s) 1202
XmnI GAANNNNTTC 1 cut(s) 542
XspI CTAG 4 cut(s) 195, 848, 1203, 1360
ZraI GACGTC 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.