Rw2G053520

f-box protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000064
Physical Location & Seq
Forward (+)
81292340 .. 81294772
2433 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G053520.1

Sequence Viewer

Length: 1278 bp
ATGTTTTCAAAGAAGCTGAAAACTGAAGTAGAAGTCTCTTCAAGTGGGGAAGGGAACCCACTGGCATGTCTTCCTCCAGATGTTTCCTTTATGATTCTTGATAAGTTGTTCGAACCCACCGACCATCTTTCTTTCGCTAGGGTTTGCAAAGATTGGTGCTCTATTTCAAGAAACTATAATATTGCAACTCAACGCTGGCACAAGAAGGGCAAGTTGCTTCCCCTTTTCTTGGTAAGTACTGAATCCGAATCGACAGGAAAGACTACCAACCACGAACTCGAAGCATATAACGTTTCTAGTGGAAAAAGATGTTACGATAATATTCATTTTCCGGTCACTCATGGAAAGAGGTGTTGTGGTTCTAGCCATGGTTGGTTGGCCATATTAGATATAGAAGGCATATGTCTCTCCATAACTCTGGTGCACCCTTTCCAAAAATCAGTGGAAGCCATCAAACTCCCTCTTTTGGATTTCATGACGACCAAGTCGTTGCAGTACTATGACATTAACCACTTAAAGAACACCTACCAAGAATACATTCGAAAGGTTATCTTGTCCTCCGATCCCATCTTGAATCGGGATAATTATGTTGTTGTTGTGCTCTACGGTTATGGTGGTTCAAAGTTGGCTTTCATCAAAGGAGGACAACAAAGATGGACTTATCCCGATAGGCGTCAAAGCTGCCTTAAGGATGCCATATTTTATAGAAACCAAGTTTATGCAGTTGGCGGAGGCGATGGAAATGAAAAAATCCTCTCATTTGATGTTAATAGTTGTAATAAACCTTCAAAGCCTCCAAAAGCAAACCAGCGTACGCCTAATAATGTCCTAAAAAAATGCGCTGCTAGTTCATATCTTGTGGAATCAGTCGAGGGAGACCACCTATGGCATGTTAGAAGACTAGTTTCTTATTCAAGGAGAGCCGATAAGTACATTGAGAGGTTTATGGTTTACAAGGTGGCGTTTGAGGACAAAGATGGATCGGTTGTGGAACAAGTAGAGGTACAAAGCATCGGAGACGAGACTCTGTTTGTGGGTGCATCTCATTCAATAGCCGTCCTGGCTTCAAACTTTCCTGGGTGTAAGCCAAATTCCATATACTATGCCACAGAGGAGCCGTATTGTTTTGGAGATCCGGACCACAAAACCTATCATATATCTAGTCTAGATGATGGAACCATCACGGAATATCAGCAAAACCTACGCCGGCATCCAAGTTTACATTTAGGAATTCCATGTGGAGTTTGGATTCTACCAATGTTTAAGGGACTATTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF295 F-box F-box-like

Protein Analysis

425

Amino Acids

48.13

Weight (kDa)

8.42

Isoelectric Point (pI)

49.05

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
F-box-like PF12937 22 - 57 1.5e-06 F-box-like
Beta-prop_KIB1-4 PF03478 100 - 378 2.3e-46 KIB1-4 beta-propeller
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000064)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04090 FvH4_1g04091 FvH4_1g04110 FvH4_1g04440 FvH4_1g05330 FvH4_1g05332 FvH4_1g05560 FvH4_1g05580 FvH4_1g05590 FvH4_1g05611 FvH4_1g05892 FvH4_1g05900 FvH4_1g06763 FvH4_1g17860 FvH4_1g17860 FvH4_1g17861 FvH4_1g17880 FvH4_1g17902 FvH4_2g08142 FvH4_2g25110 FvH4_2g34380 FvH4_3g19131 FvH4_3g20501 FvH4_4g02770 FvH4_4g02771 FvH4_4g17610 FvH4_4g26951 FvH4_4g28330 FvH4_4g29110 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29670 FvH4_4g29690 FvH4_4g29691 FvH4_4g30221 FvH4_4g30230 FvH4_4g30240 FvH4_4g30602 FvH4_4g30610 FvH4_6g01351 FvH4_6g01780 FvH4_6g01890 FvH4_6g47150 FvH4_6g52260 FvH4_6g52703 FvH4_7g23210 FvH4_7g23240 FvH4_7g23350 FvH4_7g28790 FvH4_7g28820 FvH4_7g28830 FvH4_7g28840 FvH4_7g28890 FvH4_7g29040 FvH4_7g29050 FvH4_7g29990 FvH4_7g33871 FvH4_c6g00090
malus_domestica MD01G1180800.v1.1 MD01G1199400.v1.1 MD02G1310000.v1.1 MD04G1097400.v1.1 MD07G1264800.v1.1 MD07G1264900.v1.1 MD07G1270200.v1.1 MD07G1270300.v1.1 MD07G1270500.v1.1 MD10G1043600.v1.1 MD13G1047500.v1.1 MD13G1075200.v1.1
prunus_persica Prupe.1G009400_v2.0.a1 Prupe.1G076100_v2.0.a1 Prupe.1G158300_v2.0.a1 Prupe.1G208900_v2.0.a1 Prupe.1G273900_v2.0.a1 Prupe.2G253900_v2.0.a1 Prupe.2G255700_v2.0.a1 Prupe.2G256000_v2.0.a1 Prupe.2G280300_v2.0.a1 Prupe.2G290700_v2.0.a1 Prupe.3G068500_v2.0.a1 Prupe.4G112800_v2.0.a1 Prupe.5G168600_v2.0.a1 Prupe.5G168800_v2.0.a1 Prupe.5G169100_v2.0.a1 Prupe.8G049800_v2.0.a1
pyrus_communis pycom01g19330 pycom01g20930 pycom01g22010 pycom01g22020 pycom02g26090 pycom07g24330 pycom07g24720 pycom13g04150 pycom420g01320
rosa_chinensis RchiOBHm_Chr1g0324121 RchiOBHm_Chr1g0324251 RchiOBHm_Chr1g0343741 RchiOBHm_Chr1g0355031 RchiOBHm_Chr1g0359461 RchiOBHm_Chr1g0376351 RchiOBHm_Chr1g0376381 RchiOBHm_Chr2g0092531 RchiOBHm_Chr2g0108311 RchiOBHm_Chr2g0108321 RchiOBHm_Chr2g0108331 RchiOBHm_Chr2g0133991 RchiOBHm_Chr2g0156691 RchiOBHm_Chr2g0173801 RchiOBHm_Chr3g0449701 RchiOBHm_Chr3g0449861 RchiOBHm_Chr4g0417201 RchiOBHm_Chr4g0417931 RchiOBHm_Chr4g0424551 RchiOBHm_Chr4g0442921 RchiOBHm_Chr4g0442931 RchiOBHm_Chr5g0032171 RchiOBHm_Chr5g0032191 RchiOBHm_Chr5g0032221 RchiOBHm_Chr6g0258051 RchiOBHm_Chr6g0277851 RchiOBHm_Chr6g0291671 RchiOBHm_Chr6g0291691 RchiOBHm_Chr6g0312761 RchiOBHm_Chr7g0223801 RchiOBHm_Chr7g0224141
rosa_laevigata RLG00000001917 RLG00000001951 RLG00000005804 RLG00000006309 RLG00000006344 RLG00000006458 RLG00000016168 RLG00000016259 RLG00000016305 RLG00000016306 RLG00000019810 RLG00000022223 RLG00000026077 RLG00000026607 RLG00000029703 RLG00000033364 RLG00000034633 RLG00000034637
rosa_multiflora Rmu_co8010764.1_g000001 Rmu_co8262143.1_g000001 Rmu_co8346175.1_g000001 Rmu_sc0000096.1_g000016 Rmu_sc0000544.1_g000003 Rmu_sc0000591.1_g000007 Rmu_sc0000756.1_g000029 Rmu_sc0000841.1_g000017 Rmu_sc0000907.1_g000020 Rmu_sc0000954.1_g000004 Rmu_sc0001195.1_g000007 Rmu_sc0001198.1_g000008 Rmu_sc0001201.1_g000011 Rmu_sc0001201.1_g000013 Rmu_sc0001782.1_g000035 Rmu_sc0001904.1_g000004 Rmu_sc0001962.1_g000039 Rmu_sc0002113.1_g000021 Rmu_sc0002226.1_g000017 Rmu_sc0002226.1_g000020 Rmu_sc0002327.1_g000005 Rmu_sc0002372.1_g000010 Rmu_sc0002372.1_g000014 Rmu_sc0002687.1_g000005 Rmu_sc0003031.1_g000019 Rmu_sc0003076.1_g000014 Rmu_sc0004296.1_g000009 Rmu_sc0004540.1_g000009 Rmu_sc0005369.1_g000002 Rmu_sc0005375.1_g000003 Rmu_sc0005375.1_g000013 Rmu_sc0005742.1_g000008 Rmu_sc0005742.1_g000015 Rmu_sc0005742.1_g000021 Rmu_sc0007419.1_g000011 Rmu_sc0008909.1_g000008 Rmu_sc0010556.1_g000018 Rmu_sc0010999.1_g000008 Rmu_sc0017510.1_g000003 Rmu_sc0017556.1_g000001 Rmu_sc0017900.1_g000007 Rmu_sc0024249.1_g000001 Rmu_sc0032377.1_g000001 Rmu_sc0033569.1_g000001 Rmu_sc0036457.1_g000001 Rmu_sc0041304.1_g000001 Rmu_ssc0000204.1_g000011 Rmu_ssc0000438.1_g000056
rosa_roxburghii Rroxscaffold_1G00048250 Rroxscaffold_1G00048290 Rroxscaffold_2G00092800 Rroxscaffold_2G00110580 Rroxscaffold_2G00135240 Rroxscaffold_2G00135260 Rroxscaffold_2G00135300 Rroxscaffold_2G00149010 Rroxscaffold_2G00149160 Rroxscaffold_2G00149170 Rroxscaffold_2G00149630 Rroxscaffold_2G00151760 Rroxscaffold_2G00151790 Rroxscaffold_2G00152170 Rroxscaffold_3G00225510 Rroxscaffold_3G00249210 Rroxscaffold_4G00277020 Rroxscaffold_4G00281760 Rroxscaffold_4G00281770 Rroxscaffold_4G00281810 Rroxscaffold_4G00281820 Rroxscaffold_4G00282160 Rroxscaffold_4G00310340 Rroxscaffold_5G00361040 Rroxscaffold_5G00363770 Rroxscaffold_5G00366460 Rroxscaffold_5G00378270 Rroxscaffold_5G00378310 Rroxscaffold_5G00379550 Rroxscaffold_5G00379650 Rroxscaffold_6G00422110 Rroxscaffold_6G00427680 Rroxscaffold_7G00175850 Rroxscaffold_7G00175860 Rroxscaffold_7G00190720 Rroxscaffold_7G00190750 Rroxscaffold_7G00190830 Rroxscaffold_7G00196820
rosa_rugosa Rorug01G0395900 Rorug01G0444400 Rorug01G0488100 Rorug02G0001700 Rorug02G0021600 Rorug02G0025700 Rorug02G0152200 Rorug02G0271300 Rorug02G0455800 Rorug02G0572800 Rorug02G0576000 Rorug04G0146300 Rorug04G0172200 Rorug04G0172400 Rorug04G0311300 Rorug04G0312200 Rorug04G0312300 Rorug05G0129500 Rorug05G0129700 Rorug05G0250600 Rorug06G0112600 Rorug06G0220700 Rorug06G0220800 Rorug07G0114600
rosa_samantha Rh1DG066700 Rh1DG081800 Rh1DG184300 Rh1DG401900 Rh1DG402700 Rh1DG407000 Rh1DG407600 Rh2AG200800 Rh2AG201000 Rh2AG521000 Rh2BG066200 Rh2BG066300 Rh2BG073900 Rh2BG373500 Rh2BG417600 Rh2BG662600 Rh2DG066200 Rh2DG072000 Rh2DG390000 Rh2DG677700 Rh3CG020200 Rh3CG021500 Rh3CG081200 Rh4AG209600 Rh4AG362600 Rh4AG362700 Rh4AG397200 Rh4BG209800 Rh4BG209900 Rh4BG210000 Rh4CG220800 Rh4CG271300 Rh4CG388000 Rh4DG029800 Rh4DG368700 Rh4DG403900 Rh5AG035900 Rh5BG034600 Rh5BG034900 Rh5DG228700 Rh5DG228800 Rh6AG355900 Rh6CG083600 Rh6CG229000 Rh6CG229100 Rh6CG229700 Rh6CG346500 Rh6CG346600 Rh7AG362300 Rh7AG362400 Rh7AG363200 Rh7AG365100 Rh7CG380900 Rh7CG381000 Rh7CG381600 Rh7DG437600
rosa_wichuraiana Rw0G004580 Rw0G004590 Rw0G005750 Rw0G006640 Rw0G007050 Rw0G008040 Rw0G012200 Rw0G013750 Rw0G016590 Rw1G006090 Rw1G012040 Rw1G036130 Rw1G036270 Rw1G036290 Rw1G036420 Rw1G036430 Rw1G036590 Rw2G003560 Rw2G005130 Rw2G005980 Rw2G006090 Rw2G015980 Rw2G016000 Rw2G043010 Rw2G053520 Rw4G018760 Rw4G022000 Rw4G034250 Rw5G003280 Rw5G020380 Rw5G020390 Rw6G008210 Rw6G031000 Rw7G030830

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 484
AccIII TCCGGA 1 cut(s) 1135
AciI CCGC 1 cut(s) 729
AclI AACGTT 1 cut(s) 291
AclWI GGATC 3 cut(s) 557, 988, 1127
AcoI YGGCCR 1 cut(s) 378
AcsI RAATTY 2 cut(s) 1090, 1230
AcuI CTGAAG 1 cut(s) 45
AcyI GRCGYC 1 cut(s) 673
AfaI GTAC 5 cut(s) 238, 497, 814, 932, 1005
AfiI CCNNNNNNNGG 2 cut(s) 229, 466
AflII CTTAAG 1 cut(s) 686
AgsI TTSAA 9 cut(s) 9, 42, 168, 574, 621, 789, 915, 1050, 1068
AhlI ACTAGT 1 cut(s) 901
AjnI CCWGG 2 cut(s) 1059, 1075
AjuI GAANNNNNNNTTGG 2 cut(s) 522, 554
AluBI AGCT 2 cut(s) 16, 681
AluI AGCT 2 cut(s) 16, 681
Alw21I GWGCWC 3 cut(s) 161, 426, 603
Alw26I GTCTC 5 cut(s) 40, 410, 870, 1011, 1016
Alw44I GTGCAC 1 cut(s) 422
AlwI GGATC 3 cut(s) 557, 988, 1127
Aor13HI TCCGGA 1 cut(s) 1135
AoxI GGCC 1 cut(s) 378
ApaLI GTGCAC 1 cut(s) 422
ApeKI GCWGC 2 cut(s) 681, 842
ApoI RAATTY 2 cut(s) 1090, 1230
Asp700I GAANNNNTTC 1 cut(s) 537
AspLEI GCGC 1 cut(s) 842
AspS9I GGNCC 1 cut(s) 1138
AsuII TTCGAA 2 cut(s) 111, 541
AvaII GGWCC 1 cut(s) 1138
BaeGI GKGCMC 1 cut(s) 426
BalI TGGCCA 1 cut(s) 380
BarI GAAGNNNNNNTAC 2 cut(s) 769, 801
BbsI GAAGAC 2 cut(s) 62, 904
Bbv12I GWGCWC 3 cut(s) 161, 426, 603
BbvI GCAGC 2 cut(s) 668, 829
BccI CCATC 8 cut(s) 132, 458, 575, 648, 731, 971, 1166, 1187
BceAI ACGGC 2 cut(s) 1040, 1102
BciT130I CCWGG 2 cut(s) 1061, 1077
BcoDI GTCTC 5 cut(s) 40, 410, 870, 1011, 1016
BcuI ACTAGT 1 cut(s) 901
BfaI CTAG 8 cut(s) 138, 297, 363, 846, 902, 1161, 1166, 1276
BfrI CTTAAG 1 cut(s) 686
BglI GCCNNNNNGGC 1 cut(s) 1061
BisI GCNGC 2 cut(s) 682, 843
BlsI GCNGC 2 cut(s) 683, 844
BmcAI AGTACT 2 cut(s) 238, 497
Bme1390I CCNGG 2 cut(s) 1061, 1077
Bme18I GGWCC 1 cut(s) 1138
BmgT120I GGNCC 1 cut(s) 1138
BmiI GGNNCC 3 cut(s) 56, 1116, 1177
BmrFI CCNGG 2 cut(s) 1061, 1077
BmsI GCATC 4 cut(s) 682, 1020, 1049, 1219
BpiI GAAGAC 2 cut(s) 62, 904
BpmI CTGGAG 1 cut(s) 60
Bpu14I TTCGAA 2 cut(s) 111, 541
BsaHI GRCGYC 1 cut(s) 673
BsaI GGTCTC 1 cut(s) 870
BsaJI CCNNGG 2 cut(s) 367, 1076
BsaWI WCCGGW 2 cut(s) 331, 1135
Bsc4I CCNNNNNNNGG 2 cut(s) 229, 466
Bse118I RCCGGY 1 cut(s) 1206
Bse1I ACTGG 1 cut(s) 66
BseAI TCCGGA 1 cut(s) 1135
BseBI CCWGG 2 cut(s) 1061, 1077
BseDI CCNNGG 2 cut(s) 367, 1076
BseGI GGATG 2 cut(s) 697, 1210
BseLI CCNNNNNNNGG 2 cut(s) 229, 466
BseNI ACTGG 1 cut(s) 66
BseRI GAGGAG 1 cut(s) 1127
BseSI GKGCMC 1 cut(s) 426
BseXI GCAGC 2 cut(s) 668, 829
BshFI GGCC 1 cut(s) 380
BsiHKAI GWGCWC 3 cut(s) 161, 426, 603
BsiSI CCGG 3 cut(s) 332, 1136, 1207
BsiWI CGTACG 1 cut(s) 812
BslI CCNNNNNNNGG 2 cut(s) 229, 466
BsmAI GTCTC 5 cut(s) 40, 410, 870, 1011, 1016
BsmBI CGTCTC 1 cut(s) 1011
BsnI GGCC 1 cut(s) 380
Bso31I GGTCTC 1 cut(s) 870
Bsp119I TTCGAA 2 cut(s) 111, 541
Bsp1286I GDGCHC 3 cut(s) 161, 426, 603
Bsp13I TCCGGA 1 cut(s) 1135
Bsp143I GATC 3 cut(s) 562, 980, 1132
Bsp19I CCATGG 1 cut(s) 367
BspACI CCGC 1 cut(s) 729
BspANI GGCC 1 cut(s) 380
BspEI TCCGGA 1 cut(s) 1135
BspHI TCATGA 1 cut(s) 474
BspLI GGNNCC 3 cut(s) 56, 1116, 1177
BspPI GGATC 3 cut(s) 557, 988, 1127
BspT104I TTCGAA 2 cut(s) 111, 541
BspTI CTTAAG 1 cut(s) 686
BspTNI GGTCTC 1 cut(s) 870
BsrFI RCCGGY 1 cut(s) 1206
BsrI ACTGG 1 cut(s) 66
BssAI RCCGGY 1 cut(s) 1206
BssECI CCNNGG 2 cut(s) 367, 1076
BssMI GATC 3 cut(s) 562, 980, 1132
BssNI GRCGYC 1 cut(s) 673
BssT1I CCWWGG 1 cut(s) 367
Bst2UI CCWGG 2 cut(s) 1061, 1077
Bst4CI ACNGT 1 cut(s) 608
Bst6I CTCTTC 1 cut(s) 43
BstACI GRCGYC 1 cut(s) 673
BstAFI CTTAAG 1 cut(s) 686
BstBI TTCGAA 2 cut(s) 111, 541
BstC8I GCNNGC 2 cut(s) 197, 1208
BstDSI CCRYGG 1 cut(s) 367
BstF5I GGATG 2 cut(s) 697, 1210
BstHHI GCGC 1 cut(s) 842
BstKTI GATC 3 cut(s) 565, 983, 1135
BstMAI GTCTC 5 cut(s) 40, 410, 870, 1011, 1016
BstMBI GATC 3 cut(s) 562, 980, 1132
BstMWI GCNNNNNNNGC 1 cut(s) 1061
BstNI CCWGG 2 cut(s) 1061, 1077
BstNSI RCATGY 2 cut(s) 69, 893
BstSCI CCNGG 2 cut(s) 1059, 1075
BstSLI GKGCMC 1 cut(s) 426
BstV1I GCAGC 2 cut(s) 668, 829
BstV2I GAAGAC 2 cut(s) 62, 904
BstX2I RGATCY 1 cut(s) 1132
BstXI CCANNNNNNTGG 1 cut(s) 418
BstYI RGATCY 1 cut(s) 1132
BsuRI GGCC 1 cut(s) 380
BtgI CCRYGG 1 cut(s) 367
BtgZI GCGATG 1 cut(s) 750
BtsCI GGATG 2 cut(s) 697, 1210
BtsIMutI CAGTG 2 cut(s) 59, 447
Cac8I GCNNGC 2 cut(s) 197, 1208
CciI TCATGA 1 cut(s) 474
CfoI GCGC 1 cut(s) 842
Cfr10I RCCGGY 1 cut(s) 1206
Cfr13I GGNCC 1 cut(s) 1138
CseI GACGC 1 cut(s) 662
Csp6I GTAC 5 cut(s) 237, 496, 813, 931, 1004
CviAII CATG 6 cut(s) 66, 341, 368, 475, 890, 1236
CviQI GTAC 5 cut(s) 237, 496, 813, 931, 1004
DpnI GATC 3 cut(s) 564, 982, 1134
DpnII GATC 3 cut(s) 562, 980, 1132
DrdI GACNNNNNNGTC 1 cut(s) 484
DseDI GACNNNNNNGTC 1 cut(s) 484
EaeI YGGCCR 1 cut(s) 378
Eam1104I CTCTTC 1 cut(s) 43
EarI CTCTTC 1 cut(s) 43
EciI GGCGGA 1 cut(s) 744
Eco130I CCWWGG 1 cut(s) 367
Eco31I GGTCTC 1 cut(s) 870
Eco47I GGWCC 1 cut(s) 1138
Eco57I CTGAAG 1 cut(s) 45
EcoRI GAATTC 1 cut(s) 1230
EcoRII CCWGG 2 cut(s) 1059, 1075
EcoT14I CCWWGG 1 cut(s) 367
ErhI CCWWGG 1 cut(s) 367
Esp3I CGTCTC 1 cut(s) 1011
FaeI CATG 6 cut(s) 69, 344, 371, 478, 893, 1239
FalI AAGNNNNNCTT 4 cut(s) 536, 568, 643, 675
FatI CATG 6 cut(s) 65, 340, 367, 474, 889, 1235
FauNDI CATATG 1 cut(s) 401
Fnu4HI GCNGC 2 cut(s) 682, 843
FokI GGATG 2 cut(s) 704, 1197
Fsp4HI GCNGC 2 cut(s) 682, 843
FspBI CTAG 8 cut(s) 138, 297, 363, 846, 902, 1161, 1166, 1276
GlaI GCGC 1 cut(s) 841
GluI GCNGC 2 cut(s) 682, 843
GsuI CTGGAG 1 cut(s) 60
HaeIII GGCC 1 cut(s) 380
HapII CCGG 3 cut(s) 332, 1136, 1207
HgaI GACGC 1 cut(s) 662
HhaI GCGC 1 cut(s) 842
Hin1I GRCGYC 1 cut(s) 673
Hin1II CATG 6 cut(s) 69, 344, 371, 478, 893, 1239
Hin6I GCGC 1 cut(s) 840
HinP1I GCGC 1 cut(s) 840
HinfI GANTC 7 cut(s) 94, 242, 248, 574, 863, 1024, 1249
HpaII CCGG 3 cut(s) 332, 1136, 1207
Hpy166II GTNNAC 3 cut(s) 424, 952, 1220
Hpy188I TCNGA 3 cut(s) 247, 562, 1016
Hpy188III TCNNGA 9 cut(s) 77, 98, 168, 475, 571, 578, 665, 1136, 1166
Hpy8I GTNNAC 3 cut(s) 424, 952, 1220
HpyAV CCTTC 4 cut(s) 44, 199, 389, 795
HpyCH4III ACNGT 1 cut(s) 608
HpyCH4IV ACGT 1 cut(s) 291
HpyCH4V TGCA 6 cut(s) 147, 185, 424, 493, 722, 1040
HpyF10VI GCNNNNNNNGC 1 cut(s) 1061
HpySE526I ACGT 1 cut(s) 291
Hsp92I GRCGYC 1 cut(s) 673
Hsp92II CATG 6 cut(s) 69, 344, 371, 478, 893, 1239
HspAI GCGC 1 cut(s) 840
Kpn2I TCCGGA 1 cut(s) 1135
KroI GCCGGC 1 cut(s) 1206
KroNI GCCGGC 1 cut(s) 1208
Kzo9I GATC 3 cut(s) 562, 980, 1132
LmnI GCTCC 1 cut(s) 1114
Lsp1109I GCAGC 2 cut(s) 668, 829
LweI GCATC 4 cut(s) 682, 1020, 1049, 1219
MaeI CTAG 8 cut(s) 138, 297, 363, 846, 902, 1161, 1166, 1276
MaeII ACGT 1 cut(s) 291
MaeIII GTNAC 2 cut(s) 311, 334
MalI GATC 3 cut(s) 564, 982, 1134
MboI GATC 3 cut(s) 562, 980, 1132
MboII GAAGA 3 cut(s) 30, 62, 909
MflI RGATCY 1 cut(s) 1132
MhlI GDGCHC 3 cut(s) 161, 426, 603
MlsI TGGCCA 1 cut(s) 380
MluCI AATT 3 cut(s) 583, 1090, 1230
MluNI TGGCCA 1 cut(s) 380
MlyI GAGTC 1 cut(s) 1018
Mox20I TGGCCA 1 cut(s) 380
MroI TCCGGA 1 cut(s) 1135
MroNI GCCGGC 1 cut(s) 1206
MroXI GAANNNNTTC 1 cut(s) 537
MscI TGGCCA 1 cut(s) 380
MseI TTAA 5 cut(s) 507, 515, 687, 768, 1263
MslI CAYNNNNRTG 1 cut(s) 64
Msp20I TGGCCA 1 cut(s) 380
MspCI CTTAAG 1 cut(s) 686
MspI CCGG 3 cut(s) 332, 1136, 1207
MspR9I CCNGG 2 cut(s) 1061, 1077
MvaI CCWGG 2 cut(s) 1061, 1077
MwoI GCNNNNNNNGC 1 cut(s) 1061
NaeI GCCGGC 1 cut(s) 1208
NcoI CCATGG 1 cut(s) 367
NdeI CATATG 1 cut(s) 401
NdeII GATC 3 cut(s) 562, 980, 1132
NgoMIV GCCGGC 1 cut(s) 1206
NlaIII CATG 6 cut(s) 69, 344, 371, 478, 893, 1239
NlaIV GGNNCC 3 cut(s) 56, 1116, 1177
NmuCI GTSAC 1 cut(s) 334
NspI RCATGY 2 cut(s) 69, 893
NspV TTCGAA 2 cut(s) 111, 541
PagI TCATGA 1 cut(s) 474
PcsI WCGNNNNNNNCGW 2 cut(s) 117, 485
PdiI GCCGGC 1 cut(s) 1208
PdmI GAANNNNTTC 1 cut(s) 537
PfeI GAWTC 6 cut(s) 94, 242, 248, 574, 863, 1249
Pfl23II CGTACG 1 cut(s) 812
PflFI GACNNNGTC 1 cut(s) 484
PkrI GCNGC 2 cut(s) 683, 844
PleI GAGTC 1 cut(s) 1018
PpsI GAGTC 1 cut(s) 1018
Psp1406I AACGTT 1 cut(s) 291
Psp6I CCWGG 2 cut(s) 1059, 1075
PspGI CCWGG 2 cut(s) 1059, 1075
PspLI CGTACG 1 cut(s) 812
PspN4I GGNNCC 3 cut(s) 56, 1116, 1177
PspPI GGNCC 1 cut(s) 1138
PsuI RGATCY 1 cut(s) 1132
PsyI GACNNNGTC 1 cut(s) 484
RsaI GTAC 5 cut(s) 238, 497, 814, 932, 1005
RsaNI GTAC 5 cut(s) 237, 496, 813, 931, 1004
RseI CAYNNNNRTG 1 cut(s) 64
SaqAI TTAA 5 cut(s) 507, 515, 687, 768, 1263
SatI GCNGC 2 cut(s) 682, 843
Sau3AI GATC 3 cut(s) 562, 980, 1132
Sau96I GGNCC 1 cut(s) 1138
ScaI AGTACT 2 cut(s) 238, 497
SchI GAGTC 1 cut(s) 1018
ScrFI CCNGG 2 cut(s) 1061, 1077
SduI GDGCHC 3 cut(s) 161, 426, 603
SfaNI GCATC 4 cut(s) 682, 1020, 1049, 1219
SfuI TTCGAA 2 cut(s) 111, 541
SinI GGWCC 1 cut(s) 1138
SmiMI CAYNNNNRTG 1 cut(s) 64
SmlI CTYRAG 1 cut(s) 686
SmoI CTYRAG 1 cut(s) 686
SpeI ACTAGT 1 cut(s) 901
Sse9I AATT 3 cut(s) 583, 1090, 1230
SsiI CCGC 1 cut(s) 729
SspI AATATT 2 cut(s) 181, 322
SspMI CTAG 8 cut(s) 138, 297, 363, 846, 902, 1161, 1166, 1276
StyD4I CCNGG 2 cut(s) 1059, 1075
StyI CCWWGG 1 cut(s) 367
TaaI ACNGT 1 cut(s) 608
TaiI ACGT 1 cut(s) 294
TaqI TCGA 5 cut(s) 111, 251, 279, 541, 870
TasI AATT 3 cut(s) 583, 1090, 1230
TatI WGTACW 3 cut(s) 236, 495, 930
TfiI GAWTC 6 cut(s) 94, 242, 248, 574, 863, 1249
Tru1I TTAA 5 cut(s) 507, 515, 687, 768, 1263
Tru9I TTAA 5 cut(s) 507, 515, 687, 768, 1263
TscAI CASTG 2 cut(s) 66, 447
TseFI GTSAC 1 cut(s) 334
TseI GCWGC 2 cut(s) 681, 842
Tsp45I GTSAC 1 cut(s) 334
TspDTI ATGAA 5 cut(s) 314, 463, 622, 759, 840
TspGWI ACGGA 1 cut(s) 1199
TspRI CASTG 2 cut(s) 66, 447
Tth111I GACNNNGTC 1 cut(s) 484
Vha464I CTTAAG 1 cut(s) 686
VneI GTGCAC 1 cut(s) 422
VpaK11BI GGWCC 1 cut(s) 1138
XapI RAATTY 2 cut(s) 1090, 1230
XbaI TCTAGA 1 cut(s) 1165
XceI RCATGY 2 cut(s) 69, 893
XcmI CCANNNNNNNNNTGG 1 cut(s) 1242
XmnI GAANNNNTTC 1 cut(s) 537
XspI CTAG 8 cut(s) 138, 297, 363, 846, 902, 1161, 1166, 1276
ZrmI AGTACT 2 cut(s) 238, 497
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.