rRNA methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G19870 |
| fragaria_vesca | FvH4_1g06150 FvH4_1g06190 |
| malus_domestica | MD02G1065700.v1.1 MD15G1196600.v1.1 |
| prunus_persica | Prupe.7G219800_v2.0.a1 Prupe.7G219800_v2.0.a1 |
| pyrus_communis | pycom02g05180 pycom02g05220 pycom15g17570 |
| rosa_chinensis | RchiOBHm_Chr2g0091911 |
| rosa_laevigata | RLG00000016260 |
| rosa_multiflora | Rmu_sc0031557.1_g000002 Rmu_sc0031558.1_g000001 |
| rosa_roxburghii | Rroxscaffold_2G00149620 |
| rosa_rugosa | Rorug02G0021600 |
| rosa_samantha | Rh2AG067200 Rh2BG066400 Rh2CG067700 Rh2DG066300 |
| rosa_wichuraiana | Rw2G005380 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 2 cut(s) | 810, 1034 |
| AccB1I | GGYRCC | 1 cut(s) | 608 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1056 |
| AciI | CCGC | 2 cut(s) | 218, 832 |
| AclWI | GGATC | 3 cut(s) | 468, 493, 960 |
| AcoI | YGGCCR | 3 cut(s) | 196, 623, 829 |
| AcsI | RAATTY | 4 cut(s) | 681, 782, 974, 1040 |
| AcuI | CTGAAG | 2 cut(s) | 292, 1405 |
| AdeI | CACNNNGTG | 2 cut(s) | 1056, 1460 |
| AfaI | GTAC | 1 cut(s) | 1213 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 852, 1056 |
| AgsI | TTSAA | 2 cut(s) | 702, 1202 |
| AjnI | CCWGG | 1 cut(s) | 198 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 304, 336, 349, 381, 448, 480 |
| AluBI | AGCT | 9 cut(s) | 66, 669, 948, 1014, 1146, 1191, 1329, 1417, 1437 |
| AluI | AGCT | 9 cut(s) | 66, 669, 948, 1014, 1146, 1191, 1329, 1417, 1437 |
| Alw21I | GWGCWC | 1 cut(s) | 1380 |
| Alw26I | GTCTC | 1 cut(s) | 208 |
| AlwI | GGATC | 3 cut(s) | 468, 493, 960 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 857 |
| Ama87I | CYCGRG | 1 cut(s) | 1305 |
| AoxI | GGCC | 5 cut(s) | 184, 196, 623, 829, 1263 |
| ApeKI | GCWGC | 7 cut(s) | 63, 89, 657, 1014, 1329, 1332, 1434 |
| ApoI | RAATTY | 4 cut(s) | 681, 782, 974, 1040 |
| AspLEI | GCGC | 2 cut(s) | 811, 1035 |
| AspS9I | GGNCC | 4 cut(s) | 333, 645, 905, 994 |
| AsuC2I | CCSGG | 2 cut(s) | 1306, 1307 |
| AsuHPI | GGTGA | 3 cut(s) | 386, 480, 803 |
| AvaI | CYCGRG | 1 cut(s) | 1305 |
| AvaII | GGWCC | 4 cut(s) | 333, 645, 905, 994 |
| BaeGI | GKGCMC | 1 cut(s) | 1254 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 525, 558 |
| BalI | TGGCCA | 2 cut(s) | 198, 625 |
| BanI | GGYRCC | 1 cut(s) | 608 |
| BbsI | GAAGAC | 2 cut(s) | 298, 419 |
| Bbv12I | GWGCWC | 1 cut(s) | 1380 |
| BbvCI | CCTCAGC | 1 cut(s) | 1142 |
| BbvI | GCAGC | 7 cut(s) | 75, 101, 644, 1001, 1316, 1319, 1446 |
| BccI | CCATC | 4 cut(s) | 344, 767, 856, 878 |
| BceAI | ACGGC | 2 cut(s) | 38, 115 |
| BciT130I | CCWGG | 1 cut(s) | 200 |
| BcnI | CCSGG | 2 cut(s) | 1306, 1307 |
| BcoDI | GTCTC | 1 cut(s) | 208 |
| BfaI | CTAG | 5 cut(s) | 595, 613, 864, 1183, 1216 |
| BfmI | CTRYAG | 2 cut(s) | 1015, 1318 |
| BisI | GCNGC | 8 cut(s) | 64, 90, 658, 832, 1015, 1330, 1333, 1435 |
| BlpI | GCTNAGC | 1 cut(s) | 1498 |
| BlsI | GCNGC | 8 cut(s) | 65, 91, 659, 833, 1016, 1331, 1334, 1436 |
| Bme1390I | CCNGG | 3 cut(s) | 200, 1306, 1307 |
| Bme18I | GGWCC | 4 cut(s) | 333, 645, 905, 994 |
| BmeT110I | CYCGRG | 1 cut(s) | 1305 |
| BmgT120I | GGNCC | 4 cut(s) | 333, 645, 905, 994 |
| BmiI | GGNNCC | 2 cut(s) | 610, 907 |
| BmrFI | CCNGG | 3 cut(s) | 200, 1306, 1307 |
| BmrI | ACTGGG | 1 cut(s) | 1264 |
| BmsI | GCATC | 2 cut(s) | 857, 1114 |
| BmuI | ACTGGG | 1 cut(s) | 1264 |
| BpiI | GAAGAC | 2 cut(s) | 298, 419 |
| Bpu10I | CCTNAGC | 2 cut(s) | 67, 1142 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1498 |
| BpuEI | CTTGAG | 1 cut(s) | 1110 |
| BpuMI | CCSGG | 2 cut(s) | 1306, 1307 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1299 |
| BsaI | GGTCTC | 1 cut(s) | 208 |
| BsaJI | CCNNGG | 6 cut(s) | 54, 477, 626, 1304, 1305, 1357 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 852, 1056 |
| Bse1I | ACTGG | 6 cut(s) | 170, 622, 648, 1259, 1394, 1519 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1299 |
| BseBI | CCWGG | 1 cut(s) | 200 |
| BseDI | CCNNGG | 6 cut(s) | 54, 477, 626, 1304, 1305, 1357 |
| BseGI | GGATG | 4 cut(s) | 467, 778, 959, 1137 |
| BseJI | GATNNNNATC | 1 cut(s) | 1299 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 852, 1056 |
| BseMII | CTCAG | 7 cut(s) | 274, 445, 520, 529, 1044, 1156, 1512 |
| BseNI | ACTGG | 6 cut(s) | 170, 622, 648, 1259, 1394, 1519 |
| BseRI | GAGGAG | 2 cut(s) | 362, 462 |
| BseSI | GKGCMC | 1 cut(s) | 1254 |
| BseXI | GCAGC | 7 cut(s) | 75, 101, 644, 1001, 1316, 1319, 1446 |
| BsgI | GTGCAG | 2 cut(s) | 373, 1099 |
| BshFI | GGCC | 5 cut(s) | 186, 198, 625, 831, 1265 |
| BshNI | GGYRCC | 1 cut(s) | 608 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1380 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1305 |
| BsiSI | CCGG | 1 cut(s) | 1306 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 852, 1056 |
| BsmAI | GTCTC | 1 cut(s) | 208 |
| BsnI | GGCC | 5 cut(s) | 186, 198, 625, 831, 1265 |
| Bso31I | GGTCTC | 1 cut(s) | 208 |
| BsoBI | CYCGRG | 1 cut(s) | 1305 |
| Bsp1286I | GDGCHC | 2 cut(s) | 1254, 1380 |
| Bsp143I | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1498 |
| BspACI | CCGC | 2 cut(s) | 218, 832 |
| BspANI | GGCC | 5 cut(s) | 186, 198, 625, 831, 1265 |
| BspCNI | CTCAG | 7 cut(s) | 275, 444, 521, 530, 1045, 1155, 1511 |
| BspLI | GGNNCC | 2 cut(s) | 610, 907 |
| BspMAI | CTGCAG | 2 cut(s) | 1019, 1322 |
| BspPI | GGATC | 3 cut(s) | 468, 493, 960 |
| BspT107I | GGYRCC | 1 cut(s) | 608 |
| BspTNI | GGTCTC | 1 cut(s) | 208 |
| BsrI | ACTGG | 6 cut(s) | 170, 622, 648, 1259, 1394, 1519 |
| BssECI | CCNNGG | 6 cut(s) | 54, 477, 626, 1304, 1305, 1357 |
| BssMI | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| BssT1I | CCWWGG | 2 cut(s) | 477, 626 |
| Bst2UI | CCWGG | 1 cut(s) | 200 |
| Bst6I | CTCTTC | 3 cut(s) | 175, 671, 1381 |
| BstC8I | GCNNGC | 4 cut(s) | 94, 813, 1019, 1082 |
| BstDSI | CCRYGG | 2 cut(s) | 54, 1357 |
| BstF5I | GGATG | 4 cut(s) | 467, 778, 959, 1137 |
| BstHHI | GCGC | 2 cut(s) | 811, 1035 |
| BstKTI | GATC | 6 cut(s) | 476, 488, 493, 821, 968, 1281 |
| BstMAI | GTCTC | 1 cut(s) | 208 |
| BstMBI | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 72, 666, 1066, 1326 |
| BstNI | CCWGG | 1 cut(s) | 200 |
| BstSCI | CCNGG | 3 cut(s) | 198, 1304, 1305 |
| BstSFI | CTRYAG | 2 cut(s) | 1015, 1318 |
| BstSLI | GKGCMC | 1 cut(s) | 1254 |
| BstV1I | GCAGC | 7 cut(s) | 75, 101, 644, 1001, 1316, 1319, 1446 |
| BstV2I | GAAGAC | 2 cut(s) | 298, 419 |
| BstX2I | RGATCY | 1 cut(s) | 965 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 194 |
| BstYI | RGATCY | 1 cut(s) | 965 |
| BsuRI | GGCC | 5 cut(s) | 186, 198, 625, 831, 1265 |
| BtgI | CCRYGG | 2 cut(s) | 54, 1357 |
| BtsCI | GGATG | 4 cut(s) | 467, 778, 959, 1137 |
| BtsIMutI | CAGTG | 3 cut(s) | 1050, 1252, 1433 |
| Cac8I | GCNNGC | 4 cut(s) | 94, 813, 1019, 1082 |
| CaiI | CAGNNNCTG | 1 cut(s) | 857 |
| CfoI | GCGC | 2 cut(s) | 811, 1035 |
| Cfr13I | GGNCC | 4 cut(s) | 333, 645, 905, 994 |
| Cfr9I | CCCGGG | 1 cut(s) | 1305 |
| Csp6I | GTAC | 1 cut(s) | 1212 |
| CviAII | CATG | 8 cut(s) | 188, 235, 583, 816, 1121, 1282, 1371, 1488 |
| CviQI | GTAC | 1 cut(s) | 1212 |
| DpnI | GATC | 6 cut(s) | 475, 487, 492, 820, 967, 1280 |
| DpnII | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| DraIII | CACNNNGTG | 2 cut(s) | 1056, 1460 |
| EaeI | YGGCCR | 3 cut(s) | 196, 623, 829 |
| Eam1104I | CTCTTC | 3 cut(s) | 175, 671, 1381 |
| EarI | CTCTTC | 3 cut(s) | 175, 671, 1381 |
| Eco130I | CCWWGG | 2 cut(s) | 477, 626 |
| Eco147I | AGGCCT | 1 cut(s) | 1265 |
| Eco31I | GGTCTC | 1 cut(s) | 208 |
| Eco47I | GGWCC | 4 cut(s) | 333, 645, 905, 994 |
| Eco57I | CTGAAG | 2 cut(s) | 292, 1405 |
| Eco88I | CYCGRG | 1 cut(s) | 1305 |
| EcoO109I | RGGNCCY | 1 cut(s) | 994 |
| EcoRI | GAATTC | 1 cut(s) | 1040 |
| EcoRII | CCWGG | 1 cut(s) | 198 |
| EcoT14I | CCWWGG | 2 cut(s) | 477, 626 |
| ErhI | CCWWGG | 2 cut(s) | 477, 626 |
| FaeI | CATG | 8 cut(s) | 191, 238, 586, 819, 1124, 1285, 1374, 1491 |
| FatI | CATG | 8 cut(s) | 187, 234, 582, 815, 1120, 1281, 1370, 1487 |
| Fnu4HI | GCNGC | 8 cut(s) | 64, 90, 658, 832, 1015, 1330, 1333, 1435 |
| FokI | GGATG | 4 cut(s) | 474, 785, 966, 1124 |
| Fsp4HI | GCNGC | 8 cut(s) | 64, 90, 658, 832, 1015, 1330, 1333, 1435 |
| FspBI | CTAG | 5 cut(s) | 595, 613, 864, 1183, 1216 |
| FspI | TGCGCA | 2 cut(s) | 810, 1034 |
| GlaI | GCGC | 2 cut(s) | 810, 1034 |
| GluI | GCNGC | 8 cut(s) | 64, 90, 658, 832, 1015, 1330, 1333, 1435 |
| HaeIII | GGCC | 5 cut(s) | 186, 198, 625, 831, 1265 |
| HapII | CCGG | 1 cut(s) | 1306 |
| HhaI | GCGC | 2 cut(s) | 811, 1035 |
| Hin1II | CATG | 8 cut(s) | 191, 238, 586, 819, 1124, 1285, 1374, 1491 |
| Hin6I | GCGC | 2 cut(s) | 809, 1033 |
| HinP1I | GCGC | 2 cut(s) | 809, 1033 |
| HinfI | GANTC | 4 cut(s) | 132, 600, 1300, 1353 |
| HpaII | CCGG | 1 cut(s) | 1306 |
| HphI | GGTGA | 3 cut(s) | 386, 480, 803 |
| Hpy166II | GTNNAC | 2 cut(s) | 794, 1221 |
| Hpy188I | TCNGA | 5 cut(s) | 311, 341, 434, 490, 530 |
| Hpy188III | TCNNGA | 3 cut(s) | 494, 702, 864 |
| Hpy8I | GTNNAC | 2 cut(s) | 794, 1221 |
| Hpy99I | CGWCG | 1 cut(s) | 608 |
| HpyAV | CCTTC | 7 cut(s) | 306, 371, 429, 541, 699, 734, 743 |
| HpyCH4IV | ACGT | 1 cut(s) | 690 |
| HpyCH4V | TGCA | 8 cut(s) | 354, 1017, 1080, 1114, 1127, 1285, 1320, 1434 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 72, 666, 1066, 1326 |
| HpySE526I | ACGT | 1 cut(s) | 690 |
| Hsp92II | CATG | 8 cut(s) | 191, 238, 586, 819, 1124, 1285, 1374, 1491 |
| HspAI | GCGC | 2 cut(s) | 809, 1033 |
| Kzo9I | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| LmnI | GCTCC | 2 cut(s) | 86, 1011 |
| Lsp1109I | GCAGC | 7 cut(s) | 75, 101, 644, 1001, 1316, 1319, 1446 |
| LweI | GCATC | 2 cut(s) | 857, 1114 |
| MaeI | CTAG | 5 cut(s) | 595, 613, 864, 1183, 1216 |
| MaeII | ACGT | 1 cut(s) | 690 |
| MaeIII | GTNAC | 2 cut(s) | 468, 959 |
| MalI | GATC | 6 cut(s) | 475, 487, 492, 820, 967, 1280 |
| MboI | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| MfeI | CAATTG | 1 cut(s) | 1290 |
| MflI | RGATCY | 1 cut(s) | 965 |
| MhlI | GDGCHC | 2 cut(s) | 1254, 1380 |
| MlsI | TGGCCA | 2 cut(s) | 198, 625 |
| MluNI | TGGCCA | 2 cut(s) | 198, 625 |
| MlyI | GAGTC | 1 cut(s) | 141 |
| Mox20I | TGGCCA | 2 cut(s) | 198, 625 |
| MscI | TGGCCA | 2 cut(s) | 198, 625 |
| MseI | TTAA | 5 cut(s) | 823, 889, 895, 1095, 1419 |
| Msp20I | TGGCCA | 2 cut(s) | 198, 625 |
| MspA1I | CMGCKG | 4 cut(s) | 669, 834, 1146, 1437 |
| MspI | CCGG | 1 cut(s) | 1306 |
| MspR9I | CCNGG | 3 cut(s) | 200, 1306, 1307 |
| MunI | CAATTG | 1 cut(s) | 1290 |
| MvaI | CCWGG | 1 cut(s) | 200 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 72, 666, 1066, 1326 |
| NciI | CCSGG | 2 cut(s) | 1306, 1307 |
| NdeII | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| NlaIII | CATG | 8 cut(s) | 191, 238, 586, 819, 1124, 1285, 1374, 1491 |
| NlaIV | GGNNCC | 2 cut(s) | 610, 907 |
| NmuCI | GTSAC | 1 cut(s) | 468 |
| NsbI | TGCGCA | 2 cut(s) | 810, 1034 |
| PceI | AGGCCT | 1 cut(s) | 1265 |
| PfeI | GAWTC | 3 cut(s) | 600, 1300, 1353 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1056 |
| PkrI | GCNGC | 8 cut(s) | 65, 91, 659, 833, 1016, 1331, 1334, 1436 |
| PleI | GAGTC | 1 cut(s) | 140 |
| PpsI | GAGTC | 1 cut(s) | 140 |
| PpuMI | RGGWCCY | 1 cut(s) | 994 |
| Psp5II | RGGWCCY | 1 cut(s) | 994 |
| Psp6I | CCWGG | 1 cut(s) | 198 |
| PspGI | CCWGG | 1 cut(s) | 198 |
| PspN4I | GGNNCC | 2 cut(s) | 610, 907 |
| PspPI | GGNCC | 4 cut(s) | 333, 645, 905, 994 |
| PspPPI | RGGWCCY | 1 cut(s) | 994 |
| PstI | CTGCAG | 2 cut(s) | 1019, 1322 |
| PstNI | CAGNNNCTG | 1 cut(s) | 857 |
| PsuI | RGATCY | 1 cut(s) | 965 |
| PvuII | CAGCTG | 3 cut(s) | 669, 1146, 1437 |
| RsaI | GTAC | 1 cut(s) | 1213 |
| RsaNI | GTAC | 1 cut(s) | 1212 |
| SaqAI | TTAA | 5 cut(s) | 823, 889, 895, 1095, 1419 |
| SatI | GCNGC | 8 cut(s) | 64, 90, 658, 832, 1015, 1330, 1333, 1435 |
| Sau3AI | GATC | 6 cut(s) | 473, 485, 490, 818, 965, 1278 |
| Sau96I | GGNCC | 4 cut(s) | 333, 645, 905, 994 |
| SchI | GAGTC | 1 cut(s) | 141 |
| ScrFI | CCNGG | 3 cut(s) | 200, 1306, 1307 |
| SduI | GDGCHC | 2 cut(s) | 1254, 1380 |
| SfaNI | GCATC | 2 cut(s) | 857, 1114 |
| SfcI | CTRYAG | 2 cut(s) | 1015, 1318 |
| SinI | GGWCC | 4 cut(s) | 333, 645, 905, 994 |
| SmaI | CCCGGG | 1 cut(s) | 1307 |
| SmlI | CTYRAG | 1 cut(s) | 1089 |
| SmoI | CTYRAG | 1 cut(s) | 1089 |
| SseBI | AGGCCT | 1 cut(s) | 1265 |
| SsiI | CCGC | 2 cut(s) | 218, 832 |
| SspI | AATATT | 1 cut(s) | 1313 |
| SspMI | CTAG | 5 cut(s) | 595, 613, 864, 1183, 1216 |
| StuI | AGGCCT | 1 cut(s) | 1265 |
| StyD4I | CCNGG | 3 cut(s) | 198, 1304, 1305 |
| StyI | CCWWGG | 2 cut(s) | 477, 626 |
| TaiI | ACGT | 1 cut(s) | 693 |
| TaqI | TCGA | 2 cut(s) | 545, 842 |
| TauI | GCSGC | 1 cut(s) | 834 |
| TfiI | GAWTC | 3 cut(s) | 600, 1300, 1353 |
| Tru1I | TTAA | 5 cut(s) | 823, 889, 895, 1095, 1419 |
| Tru9I | TTAA | 5 cut(s) | 823, 889, 895, 1095, 1419 |
| TscAI | CASTG | 3 cut(s) | 1057, 1259, 1433 |
| TseFI | GTSAC | 1 cut(s) | 468 |
| TseI | GCWGC | 7 cut(s) | 63, 89, 657, 1014, 1329, 1332, 1434 |
| Tsp45I | GTSAC | 1 cut(s) | 468 |
| TspDTI | ATGAA | 3 cut(s) | 109, 1440, 1476 |
| TspGWI | ACGGA | 1 cut(s) | 1346 |
| TspMI | CCCGGG | 1 cut(s) | 1305 |
| TspRI | CASTG | 3 cut(s) | 1057, 1259, 1433 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1056 |
| VpaK11BI | GGWCC | 4 cut(s) | 333, 645, 905, 994 |
| XapI | RAATTY | 4 cut(s) | 681, 782, 974, 1040 |
| XbaI | TCTAGA | 1 cut(s) | 863 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 633, 1235 |
| XmaI | CCCGGG | 1 cut(s) | 1305 |
| XspI | CTAG | 5 cut(s) | 595, 613, 864, 1183, 1216 |