Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr15

Orthogroup ID

OG0008728

Physical Location & Seq

Genomic Coordinates Forward (+)

18922923 .. 18932079

Gene Structure 9157 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD15G1231200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3165 bp

ATGTTTGTCAGAAAGCTTGTGGAGAAGGCTTCCAAGAAGCCTGGAGGAAATTCTGATGGTGTTAAAGGCAGTGATATCGATCCACGTGTAGTATTCCATCATGGAATACCATCAGGCTGTAACTTGTTGGCTTATGACTCCATCCAAAAATTACTTGCAACTTCAACCAAGGATGGCAGAATCAAATTGTTTGGCAAAGATAACACTCAAGCTCTACTTGAGTCTGTCAATGCAGTTCCAAGCAAGTTCTTACAGTTTATGGAGAACCAAGGGATCCTTATAAATGTAAATATTAGAAACCACATTGAGGTTTGGGACATTGAAAAGAACCTGTTTGCTGATGTTCATCCTTTTCAAGAAGATATAACCTCGTTCACTGTTATGCAGCATAGCCCATACATGTATGTTGGAGATTCTGCTGGTAATGTTACGGTTTTGAAGCTTGAGCAAGAACATATAGTCCAAATGAAATACACTATACCCTACTCAGTTTCTCATGGGAATAATCCAACTGAAGTTGCTGGTGATACTGCTGTGATGCATATACTGCCTCAACCAACAGCTGAAAGTAAGAGGGTTCTGATAATTTTTAGAGATGGCATAATATCATTATGGGACATTCGAGAAAGCAAATCTGTATACACAGTGGGAGGAAATCCATTGCAATCACTTCATCAGGAAGGGAAAAAGGTGACCTCTGCATGCTGGGCATGTCCCTTTGGGAGTAAAGTTGTTGTTGGCTACAATAATGGAGAGATTTGCATCTGGAGTATTCCAAGAACTGAATTTCCTTCAGAGTCTAGCACGCAAAGTGCTCCAATATCCAAACTCAATCTTGGATATAAGTTGGACAAAGTGCCTATAGCATCACTGAGATGGGCTTATGCCGATGGGAAGGCAAATCGGTTATATGTTATGGGCGCGTCTGACACTGCATCTTCAAACTTGTTGCAGGTAATTCTGTTGAATGAGTATACCGAAGGTCGAACTATCAAATTAGGGCTTCAACCGCCGGAGCCTTGTGTTGACATGGGGATCATTTCAAGCTTTAGTGAGCAAAGCAAACATAGGCAAGACTGTTTTCTTTTGCTTGGTAACTCAGGACATCTTTATGCCTATGATGATCGTTCCATCGAGAAGTATCTTGTACAAAGCCAATCTAAGTCTTCGCCTTCGTTACCAAGGGATATCATGGTGAAGATACCATTTGTTGACTCAAAGATTACCATAGCAAAATTCATCACACAAAATACCCACATGCTAAGTTCTGCAGATGAGGACTACCTTCTGCTGGCGAAAAGCTTTCCATCTCTCCTTTCTTTCGAGACAAAACTGAAAGATGGGACTCAGTTAAATGCATCCCGTTTTACTGGATTTTCAAAAGTCAAAAATTTGTACATAACTGGACACAGTGATGGAGCCATAAATTTTTGGGATTTGTCATGTCCACTTTTAATACCAATTATATCATTAAAGCAACAGAGTGAGGATGATCTTTCTTTAAGCGGTATACCACTCACAGCGTTGTTTTTCGATTTGAACTCCCGGCTTCTTGTTTCTGGAGATCAGAGTGGAACAGTTCGAATCTTTAGACTCAAGCCAGAACCATATGCCAACGTGAGCAGTTTCCTGTCTCTTCAAGGAAGTACAAAGAAAGGAAACGATCACATCATCCAAAGTGTGAAACTTTTTAAGGTTAATGGTTCTGTAGTTTCTGTGAACATAAATCACAGCACAGGACATCTTGCTGTCGGGTCTAGTAAAGGATATGTTTCGGTTATTGATATAGAAGGGCCAACTCTGTTATATCAAAAGCAAATTGCAAGTGAAATATCCACCGGCATTGTCTCCCTGCATTTCCAAACCTGCAGTTTTCATGGTTTTGACAAGAACATCTTAGCGGTTGCAACAGAGGACTCATCCGTTTTGGCTCTTGATAGTGATAATGGAAACACATTGAGCACCAGTTTGGTTCATCCTAAGAAACCCACCAGAGCACTTTTCATGCAACTCTTGGATGCGCATGATACACTGGTAAACAGATCGAATATATTGAACGGTCTTGATTTGATCAAAGGGAGTAGTACAGTTGACGACACCACACAAAAGCAGTTTCTGCTACTGCTGTGTTCTGAGAAGGCTGCATATATATACTCCTTCACACATATCATGCAGGGAGTTAAGAAGGTAATCTACAAGAAGAAGTTCCAATCATCTTGCTGCTGGGCATCAACATTTCAAACCTCCAATGATTTAGGCCTTATTCTCCTTTTTACAAGTGGAAAAATTGAAATAAGGTCCTTGCCAGATTTATCCTTCATAAAGGAGACTTCAATAAGAGGCTTCACATACTCCACTCCAAAACCAAATTCATTTTCTGACAGTTCGATATGTTCTTCGTGCGAAGGAGAACTTGTTATGGTGAACGGTGATCAGGAAATATTTCTCTTCGCTCTTTTGCTCCACAACAACAGCTTCAGGCTGTTAGACTTTTTGAACTTGACTTACCAGAAAGATTTGATAGTTTCACAAGAAGAGCTTGTCGCTGGATGTGCCACTCCAAAGGAGAAGAAAAAGGGTATATTTAGCTCAGTCATTAAAGATATCGTGGGAAGCAAACCGAAGAATGTACCTGAGATAGAAACTGCAGATACTAGAGAAAGTATCGAAGAACTTTCAGCTATCTTTTCAACTGCTAACTTTCGAGTTGACGCTGAGAATACAAATCACCAGGCTGTGGATGATGATGATCTTCAGCTAGACCTAGATGACATTGACATCGACATGGACATGGACATTCCTGGAGAAAAACCGAAAGAGCAGAGTATGTTGGCAGCTCTGAACAAGGAGAAGTTGACAAGCAAATTTATGGCCTTTAAAGGTAAAGTGATGAAACAGATGAAGTCGAAAAATGAGAAGAACTCCGGTAAGCAGGAAGAGCAACAGGATGAGAAGGTTGGTCAAGTTGACGAAATTAAGAAGCGATATGGATTTTCGTCAAGTGAATCAAACGTTGCTAAAATAGCACAAAGCAAGCTGCAGGAGAATACGAGAAAGTTGCAGGGCATTAACCTAAGAGCTACAGATATGCAAGACACAGCTCAATCATTCTCATCCTTGGCGAAAGAAGTGTTGCGAACCGAACAGGATAGGCGAAACTCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0012505 GO:0016020 GO:0017016 GO:0017075 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0030141 GO:0030234 GO:0030695 GO:0031267 GO:0031410 GO:0031982 GO:0032879 GO:0032880 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045921 GO:0048518 GO:0048522 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051223 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0097708 GO:0098772 GO:0099503 GO:1903530 GO:1903532

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lgl_C

Protein Analysis

1055

Amino Acids

116.79

Weight (kDa)

6.4

Isoelectric Point (pI)

40.94

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Beta-prop_WDR36-Utp21_1st	PF25171	93 - 275	3.7e-07	WDR36/Utp21 first beta-propeller
Lgl_C	PF08596	558 - 824	1.5e-11	Lethal giant larvae(Lgl) like, C-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35560 AT4G35560
fragaria_vesca	FvH4_1g10310
malus_domestica	MD15G1231200.v1.1
prunus_persica	Prupe.7G183000_v2.0.a1
pyrus_communis	pycom15g20610
rosa_chinensis	RchiOBHm_Chr2g0097151
rosa_laevigata	RLG00000016707
rosa_multiflora	Rmu_sc0001182.1_g000007 Rmu_sc0013203.1_g000011
rosa_roxburghii	Rroxscaffold_2G00144930
rosa_rugosa	Rorug02G0064700.1 Rorug02G0064800
rosa_samantha	Rh1CG156700 Rh2AG111800 Rh2CG116100 Rh2DG115100 Rh4AG336200 Rh4DG120600 Rh4DG338700 Rh5DG319300 Rh7AG274900
rosa_wichuraiana	Rw2G008700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	281
Acc16I	TGCGCA	1 cut(s)	2022
Acc36I	ACCTGC	2 cut(s)	943, 1874
AccB7I	CCANNNNNTGG	1 cut(s)	2737
AccI	GTMKAC	3 cut(s)	639, 974, 1510
AccII	CGCG	1 cut(s)	923
AciI	CCGC	3 cut(s)	1010, 1506, 1901
AclI	AACGTT	1 cut(s)	3012
AclWI	GGATC	4 cut(s)	74, 268, 281, 1043
AcsI	RAATTY	7 cut(s)	49, 785, 1235, 1390, 1426, 2368, 2864
AcuI	CTGAAG	4 cut(s)	534, 777, 2461, 2738
AcvI	CACGTG	1 cut(s)	86
AfaI	GTAC	5 cut(s)	1149, 1397, 1648, 2086, 2631
AfiI	CCNNNNNNNGG	3 cut(s)	307, 1291, 2737
AflIII	ACRYGT	2 cut(s)	85, 399
AjnI	CCWGG	3 cut(s)	40, 2730, 2800
AjuI	GAANNNNNNNTTGG	4 cut(s)	2353, 2359, 2385, 2391
AloI	GAACNNNNNNTCC	4 cut(s)	444, 476, 772, 804
Alw21I	GWGCWC	3 cut(s)	817, 1964, 1999
Alw26I	GTCTC	4 cut(s)	1319, 1638, 1852, 2321
AlwI	GGATC	4 cut(s)	74, 268, 281, 1043
AlwNI	CAGNNNCTG	1 cut(s)	2116
AoxI	GGCC	3 cut(s)	1793, 2257, 2871
ApeKI	GCWGC	5 cut(s)	385, 2141, 2220, 2834, 3037
ApoI	RAATTY	7 cut(s)	49, 785, 1235, 1390, 1426, 2368, 2864
Asp700I	GAANNNNTTC	2 cut(s)	2204, 2442
AspLEI	GCGC	2 cut(s)	923, 2023
AspS9I	GGNCC	2 cut(s)	1793, 2298
AsuC2I	CCSGG	1 cut(s)	1546
AsuHPI	GGTGA	6 cut(s)	536, 703, 1207, 2434, 2441, 2720
AsuII	TTCGAA	1 cut(s)	1582
AvaII	GGWCC	1 cut(s)	2298
BaeI	ACNNNNGTAYC	4 cut(s)	519, 552, 2019, 2052
BamHI	GGATCC	1 cut(s)	273
BarI	GAAGNNNNNNTAC	2 cut(s)	2177, 2209
BbrPI	CACGTG	1 cut(s)	86
BbsI	GAAGAC	1 cut(s)	1158
Bbv12I	GWGCWC	3 cut(s)	817, 1964, 1999
BbvI	GCAGC	5 cut(s)	397, 2128, 2207, 2846, 3024
BcgI	CGANNNNNNTGC	4 cut(s)	58, 92, 3040, 3074
BciT130I	CCWGG	3 cut(s)	42, 2732, 2802
BclI	TGATCA	2 cut(s)	2070, 2431
BcnI	CCSGG	1 cut(s)	1546
BcoDI	GTCTC	4 cut(s)	1319, 1638, 1852, 2321
BfaI	CTAG	5 cut(s)	801, 1758, 2655, 2759, 2765
BfmI	CTRYAG	7 cut(s)	861, 1269, 1707, 1867, 2646, 3038, 3081
BfuAI	ACCTGC	2 cut(s)	943, 1874
BisI	GCNGC	5 cut(s)	386, 2142, 2221, 2835, 3038
BlsI	GCNGC	5 cut(s)	387, 2143, 2222, 2836, 3039
Bme1390I	CCNGG	4 cut(s)	42, 1546, 2732, 2802
Bme18I	GGWCC	1 cut(s)	2298
BmgT120I	GGNCC	2 cut(s)	1793, 2298
BmiI	GGNNCC	3 cut(s)	275, 1017, 1420
BmrFI	CCNGG	4 cut(s)	42, 1546, 2732, 2802
BmsI	GCATC	7 cut(s)	528, 771, 875, 944, 1367, 2008, 2237
BpiI	GAAGAC	1 cut(s)	1158
BplI	GAGNNNNNCTC	2 cut(s)	2906, 2938
BpmI	CTGGAG	4 cut(s)	63, 787, 1581, 2823
Bpu14I	TTCGAA	1 cut(s)	1582
BpuEI	CTTGAG	4 cut(s)	192, 239, 464, 1580
BpuMI	CCSGG	1 cut(s)	1546
Bsa29I	ATCGAT	1 cut(s)	78
BsaAI	YACGTR	1 cut(s)	86
BsaBI	GATNNNNATC	4 cut(s)	78, 345, 761, 2748
BsaJI	CCNNGG	4 cut(s)	168, 268, 1181, 3117
BsaWI	WCCGGW	1 cut(s)	2924
BsaXI	ACNNNNNCTCC	2 cut(s)	2400, 2430
Bsc4I	CCNNNNNNNGG	3 cut(s)	307, 1291, 2737
Bse118I	RCCGGY	1 cut(s)	1838
Bse1I	ACTGG	4 cut(s)	1375, 1408, 1965, 2037
Bse3DI	GCAATG	1 cut(s)	659
Bse8I	GATNNNNATC	4 cut(s)	78, 345, 761, 2748
BseBI	CCWGG	3 cut(s)	42, 2732, 2802
BseCI	ATCGAT	1 cut(s)	78
BseDI	CCNNGG	4 cut(s)	168, 268, 1181, 3117
BseJI	GATNNNNATC	4 cut(s)	78, 345, 761, 2748
BseLI	CCNNNNNNNGG	3 cut(s)	307, 1291, 2737
BseMI	GCAATG	1 cut(s)	659
BseMII	CTCAG	8 cut(s)	501, 863, 1113, 1361, 2124, 2604, 2625, 2706
BseNI	ACTGG	4 cut(s)	1375, 1408, 1965, 2037
BseXI	GCAGC	5 cut(s)	397, 2128, 2207, 2846, 3024
BseYI	CCCAGC	2 cut(s)	705, 2223
Bsh1236I	CGCG	1 cut(s)	923
BshFI	GGCC	3 cut(s)	1795, 2259, 2873
BshVI	ATCGAT	1 cut(s)	78
BsiHKAI	GWGCWC	3 cut(s)	817, 1964, 1999
BsiSI	CCGG	4 cut(s)	1013, 1546, 1839, 2925
BslFI	GGGAC	4 cut(s)	329, 629, 699, 1357
BslI	CCNNNNNNNGG	3 cut(s)	307, 1291, 2737
BsmAI	GTCTC	4 cut(s)	1319, 1638, 1852, 2321
BsmFI	GGGAC	4 cut(s)	329, 629, 699, 1357
BsnI	GGCC	3 cut(s)	1795, 2259, 2873
Bsp119I	TTCGAA	1 cut(s)	1582
Bsp1286I	GDGCHC	3 cut(s)	817, 1964, 1999
Bsp1407I	TGTACA	2 cut(s)	1147, 1395
BspACI	CCGC	3 cut(s)	1010, 1506, 1901
BspANI	GGCC	3 cut(s)	1795, 2259, 2873
BspCNI	CTCAG	8 cut(s)	500, 864, 1112, 1360, 2125, 2603, 2626, 2707
BspDI	ATCGAT	1 cut(s)	78
BspFNI	CGCG	1 cut(s)	923
BspHI	TCATGA	1 cut(s)	3161
BspLI	GGNNCC	3 cut(s)	275, 1017, 1420
BspMAI	CTGCAG	4 cut(s)	1273, 1871, 2650, 3042
BspMI	ACCTGC	2 cut(s)	943, 1874
BspPI	GGATC	4 cut(s)	74, 268, 281, 1043
BspQI	GCTCTTC	2 cut(s)	2529, 2931
BspT104I	TTCGAA	1 cut(s)	1582
BsrDI	GCAATG	1 cut(s)	659
BsrFI	RCCGGY	1 cut(s)	1838
BsrGI	TGTACA	2 cut(s)	1147, 1395
BsrI	ACTGG	4 cut(s)	1375, 1408, 1965, 2037
BssAI	RCCGGY	1 cut(s)	1838
BssECI	CCNNGG	4 cut(s)	168, 268, 1181, 3117
BssNAI	GTATAC	3 cut(s)	640, 975, 1511
BssT1I	CCWWGG	4 cut(s)	168, 268, 1181, 3117
Bst1107I	GTATAC	3 cut(s)	640, 975, 1511
Bst2UI	CCWGG	3 cut(s)	42, 2732, 2802
Bst6I	CTCTTC	4 cut(s)	1641, 2453, 2529, 2931
BstAPI	GCANNNNNTGC	2 cut(s)	547, 2116
BstAUI	TGTACA	2 cut(s)	1147, 1395
BstBAI	YACGTR	1 cut(s)	86
BstBI	TTCGAA	1 cut(s)	1582
BstC8I	GCNNGC	4 cut(s)	703, 806, 1293, 3035
BstEII	GGTNACC	1 cut(s)	691
BstFNI	CGCG	1 cut(s)	923
BstHHI	GCGC	2 cut(s)	923, 2023
BstMAI	GTCTC	4 cut(s)	1319, 1638, 1852, 2321
BstMWI	GCNNNNNNNGC	7 cut(s)	547, 707, 1009, 2116, 2552, 2938, 3023
BstNI	CCWGG	3 cut(s)	42, 2732, 2802
BstNSI	RCATGY	4 cut(s)	403, 705, 714, 1261
BstPI	GGTNACC	1 cut(s)	691
BstSCI	CCNGG	4 cut(s)	40, 1544, 2730, 2800
BstSFI	CTRYAG	7 cut(s)	861, 1269, 1707, 1867, 2646, 3038, 3081
BstUI	CGCG	1 cut(s)	923
BstV1I	GCAGC	5 cut(s)	397, 2128, 2207, 2846, 3024
BstV2I	GAAGAC	1 cut(s)	1158
BstX2I	RGATCY	1 cut(s)	273
BstYI	RGATCY	1 cut(s)	273
BstZ17I	GTATAC	3 cut(s)	640, 975, 1511
Bsu15I	ATCGAT	1 cut(s)	78
BsuRI	GGCC	3 cut(s)	1795, 2259, 2873
BsuTUI	ATCGAT	1 cut(s)	78
BtsI	GCAGTG	2 cut(s)	76, 930
BtsIMutI	CAGTG	7 cut(s)	76, 375, 651, 869, 930, 1417, 2030
BveI	ACCTGC	2 cut(s)	943, 1874
Cac8I	GCNNGC	4 cut(s)	703, 806, 1293, 3035
CaiI	CAGNNNCTG	1 cut(s)	2116
CciI	TCATGA	1 cut(s)	3161
CfoI	GCGC	2 cut(s)	923, 2023
Cfr10I	RCCGGY	1 cut(s)	1838
Cfr13I	GGNCC	2 cut(s)	1793, 2298
ClaI	ATCGAT	1 cut(s)	78
CseI	GACGC	2 cut(s)	912, 2720
Csp6I	GTAC	5 cut(s)	1148, 1396, 1647, 2085, 2630
CspCI	CAANNNNNGTGG	2 cut(s)	1825, 1860
CviQI	GTAC	5 cut(s)	1148, 1396, 1647, 2085, 2630
DraI	TTTAAA	1 cut(s)	2878
Eam1104I	CTCTTC	4 cut(s)	1641, 2453, 2529, 2931
EarI	CTCTTC	4 cut(s)	1641, 2453, 2529, 2931
Eco130I	CCWWGG	4 cut(s)	168, 268, 1181, 3117
Eco147I	AGGCCT	1 cut(s)	2259
Eco32I	GATATC	3 cut(s)	76, 1189, 2605
Eco47I	GGWCC	1 cut(s)	2298
Eco57I	CTGAAG	4 cut(s)	534, 777, 2461, 2738
Eco72I	CACGTG	1 cut(s)	86
Eco91I	GGTNACC	1 cut(s)	691
EcoO109I	RGGNCCY	1 cut(s)	2298
EcoO65I	GGTNACC	1 cut(s)	691
EcoRII	CCWGG	3 cut(s)	40, 2730, 2800
EcoRV	GATATC	3 cut(s)	76, 1189, 2605
EcoT14I	CCWWGG	4 cut(s)	168, 268, 1181, 3117
EcoT22I	ATGCAT	2 cut(s)	543, 1360
ErhI	CCWWGG	4 cut(s)	168, 268, 1181, 3117
FaqI	GGGAC	4 cut(s)	329, 629, 699, 1357
FauNDI	CATATG	1 cut(s)	1609
FbaI	TGATCA	2 cut(s)	2070, 2431
FblI	GTMKAC	3 cut(s)	639, 974, 1510
Fnu4HI	GCNGC	5 cut(s)	386, 2142, 2221, 2835, 3038
Fsp4HI	GCNGC	5 cut(s)	386, 2142, 2221, 2835, 3038
FspAI	RTGCGCAY	1 cut(s)	2022
FspBI	CTAG	5 cut(s)	801, 1758, 2655, 2759, 2765
FspI	TGCGCA	1 cut(s)	2022
GlaI	GCGC	2 cut(s)	922, 2022
GluI	GCNGC	5 cut(s)	386, 2142, 2221, 2835, 3038
GsaI	CCCAGC	2 cut(s)	709, 2227
GsuI	CTGGAG	4 cut(s)	63, 787, 1581, 2823
HaeIII	GGCC	3 cut(s)	1795, 2259, 2873
HapII	CCGG	4 cut(s)	1013, 1546, 1839, 2925
HgaI	GACGC	2 cut(s)	912, 2720
HhaI	GCGC	2 cut(s)	923, 2023
Hin6I	GCGC	2 cut(s)	921, 2021
HinP1I	GCGC	2 cut(s)	921, 2021
HincII	GTYRAC	6 cut(s)	1027, 1213, 2092, 2710, 2856, 2968
HindII	GTYRAC	6 cut(s)	1027, 1213, 2092, 2710, 2856, 2968
HindIII	AAGCTT	4 cut(s)	14, 440, 1045, 1300
HpaII	CCGG	4 cut(s)	1013, 1546, 1839, 2925
HphI	GGTGA	6 cut(s)	536, 703, 1207, 2434, 2441, 2720
Hpy188I	TCNGA	9 cut(s)	11, 55, 582, 796, 928, 1569, 2134, 2380, 2841
HpyCH4IV	ACGT	3 cut(s)	85, 1617, 3012
HpyF10VI	GCNNNNNNNGC	7 cut(s)	547, 707, 1009, 2116, 2552, 2938, 3023
HpySE526I	ACGT	3 cut(s)	85, 1617, 3012
HspAI	GCGC	2 cut(s)	921, 2021
Ksp22I	TGATCA	2 cut(s)	2070, 2431
LguI	GCTCTTC	2 cut(s)	2529, 2931
LmnI	GCTCC	4 cut(s)	820, 1015, 1418, 2466
Lsp1109I	GCAGC	5 cut(s)	397, 2128, 2207, 2846, 3024
LweI	GCATC	7 cut(s)	528, 771, 875, 944, 1367, 2008, 2237
MaeI	CTAG	5 cut(s)	801, 1758, 2655, 2759, 2765
MaeII	ACGT	3 cut(s)	85, 1617, 3012
MaeIII	GTNAC	5 cut(s)	119, 427, 691, 1094, 1176
MflI	RGATCY	1 cut(s)	273
MhlI	GDGCHC	3 cut(s)	817, 1964, 1999
MlyI	GAGTC	7 cut(s)	131, 230, 806, 1208, 1339, 1587, 1910
MmeI	TCCRAC	3 cut(s)	388, 533, 828
Mph1103I	ATGCAT	2 cut(s)	543, 1360
MroXI	GAANNNNTTC	2 cut(s)	2204, 2442
MslI	CAYNNNNRTG	6 cut(s)	380, 874, 1110, 1413, 2783, 2789
MspA1I	CMGCKG	1 cut(s)	563
MspI	CCGG	4 cut(s)	1013, 1546, 1839, 2925
MspR9I	CCNGG	4 cut(s)	42, 1546, 2732, 2802
MvaI	CCWGG	3 cut(s)	42, 2732, 2802
MvnI	CGCG	1 cut(s)	923
MwoI	GCNNNNNNNGC	7 cut(s)	547, 707, 1009, 2116, 2552, 2938, 3023
NciI	CCSGG	1 cut(s)	1546
NdeI	CATATG	1 cut(s)	1609
NlaIV	GGNNCC	3 cut(s)	275, 1017, 1420
NmuCI	GTSAC	1 cut(s)	691
NsbI	TGCGCA	1 cut(s)	2022
NsiI	ATGCAT	2 cut(s)	543, 1360
NspI	RCATGY	4 cut(s)	403, 705, 714, 1261
NspV	TTCGAA	1 cut(s)	1582
PaeI	GCATGC	1 cut(s)	705
PagI	TCATGA	1 cut(s)	3161
PceI	AGGCCT	1 cut(s)	2259
PciI	ACATGT	1 cut(s)	399
PciSI	GCTCTTC	2 cut(s)	2529, 2931
PdmI	GAANNNNTTC	2 cut(s)	2204, 2442
PfeI	GAWTC	4 cut(s)	180, 413, 1584, 3005
PflMI	CCANNNNNTGG	1 cut(s)	2737
PfoI	TCCNGGA	1 cut(s)	2800
PkrI	GCNGC	5 cut(s)	387, 2143, 2222, 2836, 3039
PleI	GAGTC	7 cut(s)	131, 229, 805, 1208, 1339, 1587, 1910
PmaCI	CACGTG	1 cut(s)	86
PmlI	CACGTG	1 cut(s)	86
PpsI	GAGTC	7 cut(s)	131, 229, 805, 1208, 1339, 1587, 1910
Ppu21I	YACGTR	1 cut(s)	86
PpuMI	RGGWCCY	1 cut(s)	2298
PscI	ACATGT	1 cut(s)	399
PsiI	TTATAA	1 cut(s)	281
Psp1406I	AACGTT	1 cut(s)	3012
Psp5II	RGGWCCY	1 cut(s)	2298
Psp6I	CCWGG	3 cut(s)	40, 2730, 2800
PspCI	CACGTG	1 cut(s)	86
PspEI	GGTNACC	1 cut(s)	691
PspFI	CCCAGC	2 cut(s)	705, 2223
PspGI	CCWGG	3 cut(s)	40, 2730, 2800
PspN4I	GGNNCC	3 cut(s)	275, 1017, 1420
PspPI	GGNCC	2 cut(s)	1793, 2298
PspPPI	RGGWCCY	1 cut(s)	2298
PsrI	GAACNNNNNNTAC	2 cut(s)	2489, 2521
PstI	CTGCAG	4 cut(s)	1273, 1871, 2650, 3042
PstNI	CAGNNNCTG	1 cut(s)	2116
PsuI	RGATCY	1 cut(s)	273
PvuII	CAGCTG	1 cut(s)	563
RsaI	GTAC	5 cut(s)	1149, 1397, 1648, 2086, 2631
RsaNI	GTAC	5 cut(s)	1148, 1396, 1647, 2085, 2630
RseI	CAYNNNNRTG	6 cut(s)	380, 874, 1110, 1413, 2783, 2789
SapI	GCTCTTC	2 cut(s)	2529, 2931
SatI	GCNGC	5 cut(s)	386, 2142, 2221, 2835, 3038
Sau96I	GGNCC	2 cut(s)	1793, 2298
SchI	GAGTC	7 cut(s)	131, 230, 806, 1208, 1339, 1587, 1910
ScrFI	CCNGG	4 cut(s)	42, 1546, 2732, 2802
SduI	GDGCHC	3 cut(s)	817, 1964, 1999
SfaNI	GCATC	7 cut(s)	528, 771, 875, 944, 1367, 2008, 2237
SfcI	CTRYAG	7 cut(s)	861, 1269, 1707, 1867, 2646, 3038, 3081
SfuI	TTCGAA	1 cut(s)	1582
SinI	GGWCC	1 cut(s)	2298
SmiMI	CAYNNNNRTG	6 cut(s)	380, 874, 1110, 1413, 2783, 2789
SmlI	CTYRAG	4 cut(s)	207, 218, 443, 1595
SmoI	CTYRAG	4 cut(s)	207, 218, 443, 1595
SphI	GCATGC	1 cut(s)	705
SseBI	AGGCCT	1 cut(s)	2259
SsiI	CCGC	3 cut(s)	1010, 1506, 1901
SspI	AATATT	2 cut(s)	292, 2442
SspMI	CTAG	5 cut(s)	801, 1758, 2655, 2759, 2765
StuI	AGGCCT	1 cut(s)	2259
StyD4I	CCNGG	4 cut(s)	40, 1544, 2730, 2800
StyI	CCWWGG	4 cut(s)	168, 268, 1181, 3117
TaiI	ACGT	3 cut(s)	88, 1620, 3015
TatI	WGTACW	4 cut(s)	1147, 1395, 1646, 2084
TfiI	GAWTC	4 cut(s)	180, 413, 1584, 3005
TscAI	CASTG	7 cut(s)	76, 382, 651, 876, 937, 1417, 2037
TseFI	GTSAC	1 cut(s)	691
TseI	GCWGC	5 cut(s)	385, 2141, 2220, 2834, 3037
Tsp45I	GTSAC	1 cut(s)	691
TspGWI	ACGGA	1 cut(s)	1912
TspRI	CASTG	7 cut(s)	76, 382, 651, 876, 937, 1417, 2037
Van91I	CCANNNNNTGG	1 cut(s)	2737
VpaK11BI	GGWCC	1 cut(s)	2298
XapI	RAATTY	7 cut(s)	49, 785, 1235, 1390, 1426, 2368, 2864
XceI	RCATGY	4 cut(s)	403, 705, 714, 1261
XmiI	GTMKAC	3 cut(s)	639, 974, 1510
XmnI	GAANNNNTTC	2 cut(s)	2204, 2442
XspI	CTAG	5 cut(s)	801, 1758, 2655, 2759, 2765
Zsp2I	ATGCAT	2 cut(s)	543, 1360

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.