Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0008728

Physical Location & Seq

Genomic Coordinates Forward (+)

8720398 .. 8727248

Gene Structure 6851 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G008700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3093 bp

ATGTTTGTGAGAAAGCTTGTGGAGAAGGCTTCCAAGAAGCCTGGAGGAAGTTCTGATGGTCTAAAAGGTGGTGATATAGACCCGCGTGTAGTATTCCACAATGGAGTACCATCTGGATCTAACACTTTGGCTTATGACTCCATCCAAAAAATACTTGCAGTTTCCACAAAGGATGGCCGGATCAAGTTATTTGGTAAGGATAATACTCAAGCGCTACTTGAGTCTATCAATGCAGTACCAAGCAAGTTCTTACAGTTTGTGGAGAATCAAGGTATACTTCTAAATGTAAATTCCAAGAACCACATTGAGGTTTGGGACTTGGAACAGAACCTATTGGCTCATGTACATGCTTTTCATGAAGATATTACCTCCTTCACGGTCATGCAAAAGAGTCTCTACATGTATGTTGGAGATTCTGTTGGGAATGTCTCAGTTCTGAAGCTTGAGCAAGAATCATGTCATATATTACAAATGAAATACACTATACCTTATTCAGCTTCTCATGGGAATTCAACTGAAGTTCCAGGCGACACTGCGGTGATATACATAATGCCTCAGCCAACAGCTGAAAGTAGGAGGGTTCTTGTAATATTTAGAGATGGTCTCATAGCGTTATGGGACATTAGAGAAAGTAAATCCATATTCACAGCTGGTGTAAATACATTGCTATCACTTCAGCATGAAACAAAGAAAGTCACTTCTGCATGCTGGGCATGTCCTTTTGGGAGTAAAGTTGTTGTTGGGTACAACAACGGAGAGATTTTCATCTGGAGCATTCCTTCGAACCCAAATCCATCGGAATGTAGCACGCAAAGTAGTCCAATATGTAAACTCAATCTTGGATACAAGTTGGACAAAATTCCTATAGCATCATTGAGATGGATTTATGCAGAAGGGAAGGCAAGTCGAATATATGTTATGGGCGCATCTGACATTGTTTCATCAAACTTGTTGCAGGTAATCCTGTTGAATGAGCATACTGAAGTCCGCACTATTAGATTAGGACTTCAGTTGCCTGAGCCTTGCATCGACATGGAGATTATTTCTTCAACCTTTAGCGAGCAAAGCAAACATAAACAAGAGTGCTTTCTTGTGCTTGGTAATTCAGGACATCTTTATGCCTATGATGATTGCTCAATTGAAAAGTATCTTCTACAGAGCCAATCTAAGTCACCAGCCTCGTTGCCGAAGGAAGTCATGGTGAAGATTCCATTTGTTGATTCAAGCATTACTGTATCAAAATTTATCACAGATGATACCAACATGTCAACTTCTACAGACGAGGAATACCTTCTCCTGGCCAAAAGCATTCCATCTCTCCTTTCTTTCGAGACAAAACCAAAGGATGGAAGTCACTTAAATGCAGCCCGTTTTAGTGGCTTTTCGAAAGTTAAAAATCTTTACATAACTGGACATGGTGACGGAGGCATAAATTTTTGGGATTTGTCATCGCCACTTTTAGTACCTATTTTATCATTGAAGCAGCAGAGTGAAGAAGATCTCTCTTTAAGTGGTATAGCACTCACAGCTTTGTTTTTTGATGGAAACTCTCGACTTCTTGTTTCTGGAGATCAAAGTGGAACGGTTCGGATCTTTAGATTTAAACCTGAACCGTATGCGAATTTCAGCAGTTTCTTTCAAGGAAGTACAAAGAAAGGAAACGATATTGTTCAAAGCGTTAGACTAATGAAGGTTGATGGTTCTGTACTTTCTCTGAACATAAATCACAGCTCAAGACATCTTGCTGTGGGATCTAGTAAAGGACATGTTTCAGTTATTGATATAGAAGGGCCCACTCTATTATATGAAAGCCACATTGCAAGTGAAATTTCTACCGGCATCATCTCTCTGCAGTTTGAAACCTGCAGTTTTCATGGTTTCGACAAGAATGTCTTAGCTGTTGCAACAGAGGACTCATCTGTTTTGGCTCTTGATAGTGATAATGGAAACACATTGAGCACTAGTCTGGTTCATCCCAAGAAACCCACTAGAGCACTTTTTATGCAGATCTTGGACTCCAGCAAAGGGAGTAGTGTTGAGGATGCCATGCAAAAGCAGTCTTTGCTACTGCTATGTTCCGAAAAAGCAGCATACATATATTCCTTCACACATGTCATGCAGGGAGTTAAGAAGGTAATATACAAGAAGAAATTTCAATCATCTTGTTGCTGGGCATCGACATTCTACACCTCTGATGTTGGCCTTATACTCGTTTTTACAACTGGAAAAATTGAGATAAGGTCCTTGCATGACTTATCTTTGATAAAGGAGACTTCAATAAGGGGCTTCACATACTCCACATCAAAACTAAATTCACATGCTGGCAATTCGATATGCTCTTCATCCGAAGGAGAACTTGTTATGGTGAACAGTGATCAGGAAATCTTTCTCTTCTCTCTCTCACTCCAGAAGCAAAGCTTTAGGCTTTTAGACTCTTTCAACTTGACGTACCAGAAAGATCTGATGGTTTCACAAGAAGAGCTTACATCAGGACGCATCATTCAAAAGGAAAAGAAAAAGGGTATGTTTAGTTCTGTTCTTAAAGATATTGTGGGAAGTAAAGGGAAGAATGTCCCTGAGATGGAAAATGAAGATACTAAAGAAAGTATTGAAGAACTGTCAAAAATCTTTTCAACTGCTAATTTCCAATTTGATGCTGAGAACACAGACAACCAGGCCATGGGTGAAGATGATGATCAGTTAGATATAGATGATATCGAGATTGACATTCCTGGAGAAAAACCGAAAGAGCAGAATATGTTGGCAGCTCTTAATAAGGAAAAACTGGCAAGCAAGTTTATGGCCTTTAAAGGTAAAGTACTGAAACAAATGAAGTCTAAGAATGAGAAAAATCCCCTAAAGGAAGAGCAACCGGATGAGAAGGTTGGCTCTGTTGATGAAATTAAGAGAAGATACGGATTTTCATCTGCTACAACAAATGTTGCTAAAATAGCAGAAAGTAGGCTTCAGGAGAATACAAGAAAGTTGCAGGGGATAAACTTGAGAACTACAGAGATGCAAGACACAGCTAGATCATTTTCATCCTTGGCAAAACAAGTGTTACGAACTGAACAGGATAGACGAGCCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0012505 GO:0016020 GO:0017016 GO:0017075 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0030141 GO:0030234 GO:0030695 GO:0031267 GO:0031410 GO:0031982 GO:0032879 GO:0032880 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045921 GO:0048518 GO:0048522 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051223 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0097708 GO:0098772 GO:0099503 GO:1903530 GO:1903532

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lgl_C

Protein Analysis

1030

Amino Acids

114.08

Weight (kDa)

6.31

Isoelectric Point (pI)

45.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35560 AT4G35560
fragaria_vesca	FvH4_1g10310
malus_domestica	MD15G1231200.v1.1
prunus_persica	Prupe.7G183000_v2.0.a1
pyrus_communis	pycom15g20610
rosa_chinensis	RchiOBHm_Chr2g0097151
rosa_laevigata	RLG00000016707
rosa_multiflora	Rmu_sc0001182.1_g000007 Rmu_sc0013203.1_g000011
rosa_roxburghii	Rroxscaffold_2G00144930
rosa_rugosa	Rorug02G0064700.1 Rorug02G0064800
rosa_samantha	Rh1CG156700 Rh2AG111800 Rh2CG116100 Rh2DG115100 Rh4AG336200 Rh4DG120600 Rh4DG338700 Rh5DG319300 Rh7AG274900
rosa_wichuraiana	Rw2G008700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1889
Acc36I	ACCTGC	2 cut(s)	946, 1871
AccB7I	CCANNNNNTGG	2 cut(s)	1346, 2680
AccI	GTMKAC	1 cut(s)	274
AccII	CGCG	1 cut(s)	85
AciI	CCGC	3 cut(s)	83, 536, 988
AclWI	GGATC	4 cut(s)	124, 188, 1598, 1759
AcoI	YGGCCR	2 cut(s)	175, 1299
AcsI	RAATTY	9 cut(s)	289, 508, 858, 1241, 1432, 1621, 1827, 2150, 2311
AcuI	CTGAAG	6 cut(s)	458, 537, 659, 992, 1002, 2951
AfaI	GTAC	9 cut(s)	108, 237, 345, 746, 1464, 1648, 1707, 2450, 2820
AfeI	AGCGCT	1 cut(s)	213
AfiI	CCNNNNNNNGG	6 cut(s)	307, 1297, 1346, 2025, 2581, 2680
AflIII	ACRYGT	4 cut(s)	399, 1263, 1765, 2110
AhlI	ACTAGT	1 cut(s)	1961
AjnI	CCWGG	5 cut(s)	40, 523, 1296, 2673, 2731
AleI	CACNNNNGTG	1 cut(s)	536
Alw21I	GWGCWC	2 cut(s)	1961, 1996
Alw26I	GTCTC	5 cut(s)	398, 433, 608, 1325, 2264
AlwI	GGATC	4 cut(s)	124, 188, 1598, 1759
Aor51HI	AGCGCT	1 cut(s)	213
AoxI	GGCC	6 cut(s)	175, 1299, 1790, 2200, 2676, 2802
ApaI	GGGCCC	1 cut(s)	1794
ApeKI	GCWGC	4 cut(s)	1364, 1483, 2087, 2765
ApoI	RAATTY	9 cut(s)	289, 508, 858, 1241, 1432, 1621, 1827, 2150, 2311
Asp700I	GAANNNNTTC	2 cut(s)	1290, 2385
AspLEI	GCGC	2 cut(s)	214, 926
AspS9I	GGNCC	3 cut(s)	1790, 1791, 2241
AsuHPI	GGTGA	7 cut(s)	83, 550, 1164, 1213, 1430, 2377, 2696
AsuII	TTCGAA	2 cut(s)	782, 1385
AvaII	GGWCC	1 cut(s)	2241
BaeGI	GKGCMC	1 cut(s)	1794
BalI	TGGCCA	1 cut(s)	1301
BanII	GRGCYC	1 cut(s)	1794
BarI	GAAGNNNNNNTAC	2 cut(s)	2123, 2155
Bbv12I	GWGCWC	2 cut(s)	1961, 1996
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	4 cut(s)	1376, 1495, 2099, 2777
BciT130I	CCWGG	5 cut(s)	42, 525, 1298, 2675, 2733
BciVI	GTATCC	1 cut(s)	836
BclI	TGATCA	2 cut(s)	2374, 2695
BcoDI	GTCTC	5 cut(s)	398, 433, 608, 1325, 2264
BcuI	ACTAGT	1 cut(s)	1961
BfaI	CTAG	4 cut(s)	1755, 1962, 1989, 3030
BfmI	CTRYAG	6 cut(s)	864, 1154, 1275, 1850, 1864, 3009
BfoI	RGCGCY	1 cut(s)	215
BfuAI	ACCTGC	2 cut(s)	946, 1871
BfuI	GTATCC	1 cut(s)	836
BglII	AGATCT	3 cut(s)	1498, 2007, 2458
BisI	GCNGC	4 cut(s)	1365, 1484, 2088, 2766
BlsI	GCNGC	4 cut(s)	1366, 1485, 2089, 2767
BmcAI	AGTACT	1 cut(s)	2820
Bme1390I	CCNGG	5 cut(s)	42, 525, 1298, 2675, 2733
Bme18I	GGWCC	1 cut(s)	2241
BmgT120I	GGNCC	3 cut(s)	1790, 1791, 2241
BmiI	GGNNCC	1 cut(s)	1792
BmrFI	CCNGG	5 cut(s)	42, 525, 1298, 2675, 2733
BmsI	GCATC	9 cut(s)	878, 935, 1035, 1848, 2032, 2183, 2505, 2644, 3006
BplI	GAGNNNNNCTC	2 cut(s)	588, 620
BpmI	CTGGAG	6 cut(s)	63, 790, 1587, 2002, 2390, 2754
Bpu10I	CCTNAGC	2 cut(s)	555, 1017
Bpu14I	TTCGAA	2 cut(s)	782, 1385
BpuEI	CTTGAG	5 cut(s)	192, 239, 464, 1717, 3022
BsaBI	GATNNNNATC	3 cut(s)	764, 2694, 2923
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	2 cut(s)	2679, 3045
BsaWI	WCCGGW	1 cut(s)	2872
BsaXI	ACNNNNNCTCC	4 cut(s)	402, 432, 2343, 2373
Bsc4I	CCNNNNNNNGG	6 cut(s)	307, 1297, 1346, 2025, 2581, 2680
Bse118I	RCCGGY	1 cut(s)	1835
Bse1I	ACTGG	3 cut(s)	1414, 2227, 2790
Bse3DI	GCAATG	2 cut(s)	662, 1815
Bse8I	GATNNNNATC	3 cut(s)	764, 2694, 2923
BseBI	CCWGG	5 cut(s)	42, 525, 1298, 2675, 2733
BseDI	CCNNGG	2 cut(s)	2679, 3045
BseGI	GGATG	8 cut(s)	141, 178, 1351, 1972, 2047, 2342, 2881, 3041
BseJI	GATNNNNATC	3 cut(s)	764, 2694, 2923
BseLI	CCNNNNNNNGG	6 cut(s)	307, 1297, 1346, 2025, 2581, 2680
BseMI	GCAATG	2 cut(s)	662, 1815
BseMII	CTCAG	5 cut(s)	444, 569, 1008, 2568, 2649
BseNI	ACTGG	3 cut(s)	1414, 2227, 2790
BseSI	GKGCMC	1 cut(s)	1794
BseXI	GCAGC	4 cut(s)	1376, 1495, 2099, 2777
BseYI	CCCAGC	2 cut(s)	708, 2169
Bsh1236I	CGCG	1 cut(s)	85
BshFI	GGCC	6 cut(s)	177, 1301, 1792, 2202, 2678, 2804
BsiHKAI	GWGCWC	2 cut(s)	1961, 1996
BsiSI	CCGG	3 cut(s)	178, 1836, 2873
BslFI	GGGAC	3 cut(s)	329, 632, 2558
BslI	CCNNNNNNNGG	6 cut(s)	307, 1297, 1346, 2025, 2581, 2680
BsmAI	GTCTC	5 cut(s)	398, 433, 608, 1325, 2264
BsmFI	GGGAC	3 cut(s)	329, 632, 2558
BsmI	GAATGC	2 cut(s)	774, 1308
BsnI	GGCC	6 cut(s)	177, 1301, 1792, 2202, 2678, 2804
Bso31I	GGTCTC	1 cut(s)	608
Bsp119I	TTCGAA	2 cut(s)	782, 1385
Bsp120I	GGGCCC	1 cut(s)	1790
Bsp1286I	GDGCHC	3 cut(s)	1794, 1961, 1996
Bsp1407I	TGTACA	1 cut(s)	343
Bsp19I	CCATGG	1 cut(s)	2679
BspACI	CCGC	3 cut(s)	83, 536, 988
BspANI	GGCC	6 cut(s)	177, 1301, 1792, 2202, 2678, 2804
BspCNI	CTCAG	5 cut(s)	443, 568, 1009, 2569, 2650
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	1 cut(s)	355
BspLI	GGNNCC	1 cut(s)	1792
BspMAI	CTGCAG	2 cut(s)	1854, 1868
BspMI	ACCTGC	2 cut(s)	946, 1871
BspPI	GGATC	4 cut(s)	124, 188, 1598, 1759
BspQI	GCTCTTC	3 cut(s)	2344, 2472, 2859
BspT104I	TTCGAA	2 cut(s)	782, 1385
BspTNI	GGTCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	662, 1815
BsrFI	RCCGGY	1 cut(s)	1835
BsrGI	TGTACA	1 cut(s)	343
BsrI	ACTGG	3 cut(s)	1414, 2227, 2790
BssAI	RCCGGY	1 cut(s)	1835
BssECI	CCNNGG	2 cut(s)	2679, 3045
BssNAI	GTATAC	1 cut(s)	275
BssT1I	CCWWGG	2 cut(s)	2679, 3045
Bst1107I	GTATAC	1 cut(s)	275
Bst2UI	CCWGG	5 cut(s)	42, 525, 1298, 2675, 2733
Bst4CI	ACNGT	7 cut(s)	255, 379, 1234, 1585, 1614, 2372, 2619
Bst6I	CTCTTC	4 cut(s)	2344, 2396, 2472, 2859
BstAPI	GCANNNNNTGC	1 cut(s)	2062
BstAUI	TGTACA	1 cut(s)	343
BstBI	TTCGAA	2 cut(s)	782, 1385
BstC8I	GCNNGC	5 cut(s)	706, 809, 1061, 2323, 2791
BstDEI	CTNAG	8 cut(s)	430, 555, 1017, 1167, 1894, 2577, 2658, 2838
BstDSI	CCRYGG	1 cut(s)	2679
BstF5I	GGATG	8 cut(s)	141, 178, 1351, 1972, 2047, 2342, 2881, 3041
BstFNI	CGCG	1 cut(s)	85
BstH2I	RGCGCY	1 cut(s)	215
BstHHI	GCGC	2 cut(s)	214, 926
BstMAI	GTCTC	5 cut(s)	398, 433, 608, 1325, 2264
BstMWI	GCNNNNNNNGC	5 cut(s)	710, 1065, 1526, 2062, 2951
BstNI	CCWGG	5 cut(s)	42, 525, 1298, 2675, 2733
BstNSI	RCATGY	8 cut(s)	350, 403, 708, 717, 1267, 1769, 2114, 2321
BstSCI	CCNGG	5 cut(s)	40, 523, 1296, 2673, 2731
BstSFI	CTRYAG	6 cut(s)	864, 1154, 1275, 1850, 1864, 3009
BstSLI	GKGCMC	1 cut(s)	1794
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	4 cut(s)	1376, 1495, 2099, 2777
BstX2I	RGATCY	6 cut(s)	116, 1498, 1590, 1751, 2007, 2458
BstYI	RGATCY	6 cut(s)	116, 1498, 1590, 1751, 2007, 2458
BstZ17I	GTATAC	1 cut(s)	275
BsuI	GTATCC	1 cut(s)	836
BsuRI	GGCC	6 cut(s)	177, 1301, 1792, 2202, 2678, 2804
BtgI	CCRYGG	1 cut(s)	2679
BtgZI	GCGATG	1 cut(s)	1434
BtsCI	GGATG	8 cut(s)	141, 178, 1351, 1972, 2047, 2342, 2881, 3041
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	2 cut(s)	531, 2377
BveI	ACCTGC	2 cut(s)	946, 1871
Cac8I	GCNNGC	5 cut(s)	706, 809, 1061, 2323, 2791
CciI	TCATGA	1 cut(s)	355
CfoI	GCGC	2 cut(s)	214, 926
Cfr10I	RCCGGY	1 cut(s)	1835
Cfr13I	GGNCC	3 cut(s)	1790, 1791, 2241
CseI	GACGC	1 cut(s)	2502
Csp6I	GTAC	9 cut(s)	107, 236, 344, 745, 1463, 1647, 1706, 2449, 2819
CviQI	GTAC	9 cut(s)	107, 236, 344, 745, 1463, 1647, 1706, 2449, 2819
DdeI	CTNAG	8 cut(s)	430, 555, 1017, 1167, 1894, 2577, 2658, 2838
DraI	TTTAAA	2 cut(s)	1603, 2809
DrdI	GACNNNNNNGTC	1 cut(s)	1889
DseDI	GACNNNNNNGTC	1 cut(s)	1889
EaeI	YGGCCR	2 cut(s)	175, 1299
Eam1104I	CTCTTC	4 cut(s)	2344, 2396, 2472, 2859
EarI	CTCTTC	4 cut(s)	2344, 2396, 2472, 2859
Eco130I	CCWWGG	2 cut(s)	2679, 3045
Eco24I	GRGCYC	1 cut(s)	1794
Eco31I	GGTCTC	1 cut(s)	608
Eco32I	GATATC	1 cut(s)	2716
Eco47I	GGWCC	1 cut(s)	2241
Eco47III	AGCGCT	1 cut(s)	213
Eco57I	CTGAAG	6 cut(s)	458, 537, 659, 992, 1002, 2951
EcoO109I	RGGNCCY	2 cut(s)	1790, 2241
EcoRI	GAATTC	1 cut(s)	508
EcoRII	CCWGG	5 cut(s)	40, 523, 1296, 2673, 2731
EcoRV	GATATC	1 cut(s)	2716
EcoT14I	CCWWGG	2 cut(s)	2679, 3045
EcoT38I	GRGCYC	1 cut(s)	1794
ErhI	CCWWGG	2 cut(s)	2679, 3045
FaqI	GGGAC	3 cut(s)	329, 632, 2558
FauI	CCCGC	1 cut(s)	90
FbaI	TGATCA	2 cut(s)	2374, 2695
FblI	GTMKAC	1 cut(s)	274
Fnu4HI	GCNGC	4 cut(s)	1365, 1484, 2088, 2766
FokI	GGATG	8 cut(s)	128, 185, 1358, 1959, 2054, 2329, 2888, 3028
FriOI	GRGCYC	1 cut(s)	1794
Fsp4HI	GCNGC	4 cut(s)	1365, 1484, 2088, 2766
FspBI	CTAG	4 cut(s)	1755, 1962, 1989, 3030
GlaI	GCGC	2 cut(s)	213, 925
GluI	GCNGC	4 cut(s)	1365, 1484, 2088, 2766
GsaI	CCCAGC	2 cut(s)	712, 2173
GsuI	CTGGAG	6 cut(s)	63, 790, 1587, 2002, 2390, 2754
HaeII	RGCGCY	1 cut(s)	215
HaeIII	GGCC	6 cut(s)	177, 1301, 1792, 2202, 2678, 2804
HapII	CCGG	3 cut(s)	178, 1836, 2873
HgaI	GACGC	1 cut(s)	2502
HhaI	GCGC	2 cut(s)	214, 926
Hin6I	GCGC	2 cut(s)	212, 924
HinP1I	GCGC	2 cut(s)	212, 924
HincII	GTYRAC	1 cut(s)	1269
HindII	GTYRAC	1 cut(s)	1269
HindIII	AAGCTT	3 cut(s)	14, 440, 2416
HpaII	CCGG	3 cut(s)	178, 1836, 2873
HphI	GGTGA	7 cut(s)	83, 550, 1164, 1213, 1430, 2377, 2696
Hpy166II	GTNNAC	4 cut(s)	275, 830, 1269, 2368
Hpy8I	GTNNAC	4 cut(s)	275, 830, 1269, 2368
HpyCH4III	ACNGT	7 cut(s)	255, 379, 1234, 1585, 1614, 2372, 2619
HpyCH4IV	ACGT	1 cut(s)	2447
HpyF10VI	GCNNNNNNNGC	5 cut(s)	710, 1065, 1526, 2062, 2951
HpyF3I	CTNAG	8 cut(s)	430, 555, 1017, 1167, 1894, 2577, 2658, 2838
HpySE526I	ACGT	1 cut(s)	2447
HspAI	GCGC	2 cut(s)	212, 924
Ksp22I	TGATCA	2 cut(s)	2374, 2695
LguI	GCTCTTC	3 cut(s)	2344, 2472, 2859
LmnI	GCTCC	1 cut(s)	771
Lsp1109I	GCAGC	4 cut(s)	1376, 1495, 2099, 2777
LweI	GCATC	9 cut(s)	878, 935, 1035, 1848, 2032, 2183, 2505, 2644, 3006
MaeI	CTAG	4 cut(s)	1755, 1962, 1989, 3030
MaeII	ACGT	1 cut(s)	2447
MaeIII	GTNAC	5 cut(s)	694, 1170, 1352, 1418, 3060
MfeI	CAATTG	1 cut(s)	1137
MflI	RGATCY	6 cut(s)	116, 1498, 1590, 1751, 2007, 2458
MhlI	GDGCHC	3 cut(s)	1794, 1961, 1996
MlsI	TGGCCA	1 cut(s)	1301
MluNI	TGGCCA	1 cut(s)	1301
MlyI	GAGTC	6 cut(s)	131, 230, 400, 1907, 2009, 2426
MmeI	TCCRAC	2 cut(s)	388, 831
Mox20I	TGGCCA	1 cut(s)	1301
MroXI	GAANNNNTTC	2 cut(s)	1290, 2385
MscI	TGGCCA	1 cut(s)	1301
MseI	TTAA	9 cut(s)	1358, 1392, 1508, 1602, 2127, 2541, 2772, 2808, 2904
MslI	CAYNNNNRTG	8 cut(s)	345, 380, 536, 799, 877, 1031, 1116, 1359
Msp20I	TGGCCA	1 cut(s)	1301
MspA1I	CMGCKG	2 cut(s)	566, 650
MspI	CCGG	3 cut(s)	178, 1836, 2873
MspR9I	CCNGG	5 cut(s)	42, 525, 1298, 2675, 2733
MunI	CAATTG	1 cut(s)	1137
Mva1269I	GAATGC	2 cut(s)	774, 1308
MvaI	CCWGG	5 cut(s)	42, 525, 1298, 2675, 2733
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	5 cut(s)	710, 1065, 1526, 2062, 2951
NcoI	CCATGG	1 cut(s)	2679
NlaIV	GGNNCC	1 cut(s)	1792
NmuCI	GTSAC	4 cut(s)	694, 1170, 1352, 1418
NspI	RCATGY	8 cut(s)	350, 403, 708, 717, 1267, 1769, 2114, 2321
NspV	TTCGAA	2 cut(s)	782, 1385
OliI	CACNNNNGTG	1 cut(s)	536
PaeI	GCATGC	1 cut(s)	708
PagI	TCATGA	1 cut(s)	355
PciI	ACATGT	4 cut(s)	399, 1263, 1765, 2110
PciSI	GCTCTTC	3 cut(s)	2344, 2472, 2859
PctI	GAATGC	2 cut(s)	774, 1308
PdmI	GAANNNNTTC	2 cut(s)	1290, 2385
PfeI	GAWTC	5 cut(s)	265, 413, 452, 1207, 1220
PflMI	CCANNNNNTGG	2 cut(s)	1346, 2680
PfoI	TCCNGGA	1 cut(s)	2731
PkrI	GCNGC	4 cut(s)	1366, 1485, 2089, 2767
PleI	GAGTC	6 cut(s)	131, 229, 399, 1907, 2009, 2426
PpsI	GAGTC	6 cut(s)	131, 229, 399, 1907, 2009, 2426
PpuMI	RGGWCCY	1 cut(s)	2241
PscI	ACATGT	4 cut(s)	399, 1263, 1765, 2110
Psp5II	RGGWCCY	1 cut(s)	2241
Psp6I	CCWGG	5 cut(s)	40, 523, 1296, 2673, 2731
PspFI	CCCAGC	2 cut(s)	708, 2169
PspGI	CCWGG	5 cut(s)	40, 523, 1296, 2673, 2731
PspN4I	GGNNCC	1 cut(s)	1792
PspOMI	GGGCCC	1 cut(s)	1790
PspPI	GGNCC	3 cut(s)	1790, 1791, 2241
PspPPI	RGGWCCY	1 cut(s)	2241
PsrI	GAACNNNNNNTAC	2 cut(s)	2515, 2547
PstI	CTGCAG	2 cut(s)	1854, 1868
PsuI	RGATCY	6 cut(s)	116, 1498, 1590, 1751, 2007, 2458
PvuII	CAGCTG	2 cut(s)	566, 650
RsaI	GTAC	9 cut(s)	108, 237, 345, 746, 1464, 1648, 1707, 2450, 2820
RsaNI	GTAC	9 cut(s)	107, 236, 344, 745, 1463, 1647, 1706, 2449, 2819
RseI	CAYNNNNRTG	8 cut(s)	345, 380, 536, 799, 877, 1031, 1116, 1359
SapI	GCTCTTC	3 cut(s)	2344, 2472, 2859
SaqAI	TTAA	9 cut(s)	1358, 1392, 1508, 1602, 2127, 2541, 2772, 2808, 2904
SatI	GCNGC	4 cut(s)	1365, 1484, 2088, 2766
Sau96I	GGNCC	3 cut(s)	1790, 1791, 2241
ScaI	AGTACT	1 cut(s)	2820
SchI	GAGTC	6 cut(s)	131, 230, 400, 1907, 2009, 2426
ScrFI	CCNGG	5 cut(s)	42, 525, 1298, 2675, 2733
SduI	GDGCHC	3 cut(s)	1794, 1961, 1996
SfaNI	GCATC	9 cut(s)	878, 935, 1035, 1848, 2032, 2183, 2505, 2644, 3006
SfcI	CTRYAG	6 cut(s)	864, 1154, 1275, 1850, 1864, 3009
SfuI	TTCGAA	2 cut(s)	782, 1385
SinI	GGWCC	1 cut(s)	2241
SmiMI	CAYNNNNRTG	8 cut(s)	345, 380, 536, 799, 877, 1031, 1116, 1359
SmlI	CTYRAG	5 cut(s)	207, 218, 443, 1732, 3001
SmoI	CTYRAG	5 cut(s)	207, 218, 443, 1732, 3001
SpeI	ACTAGT	1 cut(s)	1961
SphI	GCATGC	1 cut(s)	708
SsiI	CCGC	3 cut(s)	83, 536, 988
SspI	AATATT	1 cut(s)	591
SspMI	CTAG	4 cut(s)	1755, 1962, 1989, 3030
StyD4I	CCNGG	5 cut(s)	40, 523, 1296, 2673, 2731
StyI	CCWWGG	2 cut(s)	2679, 3045
TaaI	ACNGT	7 cut(s)	255, 379, 1234, 1585, 1614, 2372, 2619
TaiI	ACGT	1 cut(s)	2450
TatI	WGTACW	4 cut(s)	343, 1646, 1705, 2818
TfiI	GAWTC	5 cut(s)	265, 413, 452, 1207, 1220
Tru1I	TTAA	9 cut(s)	1358, 1392, 1508, 1602, 2127, 2541, 2772, 2808, 2904
Tru9I	TTAA	9 cut(s)	1358, 1392, 1508, 1602, 2127, 2541, 2772, 2808, 2904
TscAI	CASTG	2 cut(s)	538, 2377
TseFI	GTSAC	4 cut(s)	694, 1170, 1352, 1418
TseI	GCWGC	4 cut(s)	1364, 1483, 2087, 2765
Tsp45I	GTSAC	4 cut(s)	694, 1170, 1352, 1418
TspGWI	ACGGA	3 cut(s)	768, 1437, 2931
TspRI	CASTG	2 cut(s)	538, 2377
Van91I	CCANNNNNTGG	2 cut(s)	1346, 2680
VpaK11BI	GGWCC	1 cut(s)	2241
XapI	RAATTY	9 cut(s)	289, 508, 858, 1241, 1432, 1621, 1827, 2150, 2311
XceI	RCATGY	8 cut(s)	350, 403, 708, 717, 1267, 1769, 2114, 2321
XmiI	GTMKAC	1 cut(s)	274
XmnI	GAANNNNTTC	2 cut(s)	1290, 2385
XspI	CTAG	4 cut(s)	1755, 1962, 1989, 3030
ZrmI	AGTACT	1 cut(s)	2820

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.