WD40 repeats
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G35560 AT4G35560 |
| fragaria_vesca | FvH4_1g10310 |
| malus_domestica | MD15G1231200.v1.1 |
| prunus_persica | Prupe.7G183000_v2.0.a1 |
| pyrus_communis | pycom15g20610 |
| rosa_chinensis | RchiOBHm_Chr2g0097151 |
| rosa_laevigata | RLG00000016707 |
| rosa_multiflora | Rmu_sc0001182.1_g000007 Rmu_sc0013203.1_g000011 |
| rosa_roxburghii | Rroxscaffold_2G00144930 |
| rosa_rugosa | Rorug02G0064700.1 Rorug02G0064800 |
| rosa_samantha | Rh1CG156700 Rh2AG111800 Rh2CG116100 Rh2DG115100 Rh4AG336200 Rh4DG120600 Rh4DG338700 Rh5DG319300 Rh7AG274900 |
| rosa_wichuraiana | Rw2G008700 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 941 |
| Acc36I | ACCTGC | 1 cut(s) | 923 |
| AccB7I | CCANNNNNTGG | 3 cut(s) | 398, 1903, 1990 |
| AciI | CCGC | 1 cut(s) | 40 |
| AclWI | GGATC | 2 cut(s) | 650, 811 |
| AcoI | YGGCCR | 1 cut(s) | 351 |
| AcsI | RAATTY | 7 cut(s) | 293, 484, 673, 879, 1202, 1373, 1534 |
| AcuI | CTGAAG | 3 cut(s) | 44, 54, 2264 |
| AfaI | GTAC | 5 cut(s) | 516, 700, 759, 1673, 2130 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 349, 398, 1077, 1804, 1903, 1990 |
| AflIII | ACRYGT | 4 cut(s) | 315, 817, 1162, 1333 |
| AhlI | ACTAGT | 1 cut(s) | 1013 |
| AjnI | CCWGG | 4 cut(s) | 348, 1896, 1983, 2041 |
| AluBI | AGCT | 7 cut(s) | 581, 783, 950, 1705, 2078, 2278, 2342 |
| AluI | AGCT | 7 cut(s) | 581, 783, 950, 1705, 2078, 2278, 2342 |
| Alw21I | GWGCWC | 2 cut(s) | 1013, 1048 |
| Alw26I | GTCTC | 3 cut(s) | 377, 1487, 2237 |
| AlwI | GGATC | 2 cut(s) | 650, 811 |
| AoxI | GGCC | 7 cut(s) | 351, 842, 1252, 1423, 1899, 1986, 2112 |
| ApaI | GGGCCC | 1 cut(s) | 846 |
| ApeKI | GCWGC | 5 cut(s) | 416, 535, 1139, 1310, 2075 |
| ApoI | RAATTY | 7 cut(s) | 293, 484, 673, 879, 1202, 1373, 1534 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 342, 1608 |
| AspS9I | GGNCC | 4 cut(s) | 842, 843, 1293, 1464 |
| AsuHPI | GGTGA | 6 cut(s) | 216, 265, 482, 1600, 1919, 2006 |
| AsuII | TTCGAA | 1 cut(s) | 437 |
| AvaII | GGWCC | 2 cut(s) | 1293, 1464 |
| BaeGI | GKGCMC | 1 cut(s) | 846 |
| BalI | TGGCCA | 1 cut(s) | 353 |
| BanII | GRGCYC | 1 cut(s) | 846 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 1175, 1207, 1346, 1378 |
| Bbv12I | GWGCWC | 2 cut(s) | 1013, 1048 |
| BbvI | GCAGC | 5 cut(s) | 428, 547, 1151, 1322, 2087 |
| BccI | CCATC | 6 cut(s) | 373, 392, 587, 743, 1681, 1798 |
| BciT130I | CCWGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| BclI | TGATCA | 3 cut(s) | 1597, 1918, 2005 |
| BcoDI | GTCTC | 3 cut(s) | 377, 1487, 2237 |
| BcuI | ACTAGT | 1 cut(s) | 1013 |
| BfaI | CTAG | 4 cut(s) | 807, 1014, 1041, 2343 |
| BfmI | CTRYAG | 5 cut(s) | 206, 327, 902, 916, 2322 |
| BfuAI | ACCTGC | 1 cut(s) | 923 |
| BglII | AGATCT | 3 cut(s) | 550, 1059, 1681 |
| BisI | GCNGC | 5 cut(s) | 417, 536, 1140, 1311, 2076 |
| BlsI | GCNGC | 5 cut(s) | 418, 537, 1141, 1312, 2077 |
| BmcAI | AGTACT | 1 cut(s) | 2130 |
| Bme1390I | CCNGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| Bme18I | GGWCC | 2 cut(s) | 1293, 1464 |
| BmgT120I | GGNCC | 4 cut(s) | 842, 843, 1293, 1464 |
| BmiI | GGNNCC | 1 cut(s) | 844 |
| BmrFI | CCNGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| BmsI | GCATC | 8 cut(s) | 87, 900, 1084, 1235, 1406, 1728, 1867, 2319 |
| BpmI | CTGGAG | 4 cut(s) | 639, 1054, 1613, 2064 |
| Bpu10I | CCTNAGC | 1 cut(s) | 69 |
| Bpu14I | TTCGAA | 1 cut(s) | 437 |
| BpuEI | CTTGAG | 2 cut(s) | 769, 2335 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1917, 2004, 2233 |
| BsaJI | CCNNGG | 3 cut(s) | 1902, 1989, 2358 |
| BsaWI | WCCGGW | 1 cut(s) | 2182 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1566, 1596 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 349, 398, 1077, 1804, 1903, 1990 |
| Bse118I | RCCGGY | 1 cut(s) | 887 |
| Bse1I | ACTGG | 4 cut(s) | 466, 1279, 1450, 2100 |
| Bse3DI | GCAATG | 1 cut(s) | 867 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1917, 2004, 2233 |
| BseBI | CCWGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| BseDI | CCNNGG | 3 cut(s) | 1902, 1989, 2358 |
| BseGI | GGATG | 6 cut(s) | 403, 1024, 1099, 1565, 2191, 2354 |
| BseJI | GATNNNNATC | 3 cut(s) | 1917, 2004, 2233 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 349, 398, 1077, 1804, 1903, 1990 |
| BseMI | GCAATG | 1 cut(s) | 867 |
| BseMII | CTCAG | 4 cut(s) | 60, 1791, 1872, 2232 |
| BseNI | ACTGG | 4 cut(s) | 466, 1279, 1450, 2100 |
| BseSI | GKGCMC | 1 cut(s) | 846 |
| BseXI | GCAGC | 5 cut(s) | 428, 547, 1151, 1322, 2087 |
| BseYI | CCCAGC | 2 cut(s) | 1221, 1392 |
| BshFI | GGCC | 7 cut(s) | 353, 844, 1254, 1425, 1901, 1988, 2114 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1013, 1048 |
| BsiSI | CCGG | 2 cut(s) | 888, 2183 |
| BslFI | GGGAC | 1 cut(s) | 1781 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 349, 398, 1077, 1804, 1903, 1990 |
| BsmAI | GTCTC | 3 cut(s) | 377, 1487, 2237 |
| BsmFI | GGGAC | 1 cut(s) | 1781 |
| BsmI | GAATGC | 1 cut(s) | 360 |
| BsnI | GGCC | 7 cut(s) | 353, 844, 1254, 1425, 1901, 1988, 2114 |
| Bsp119I | TTCGAA | 1 cut(s) | 437 |
| Bsp120I | GGGCCC | 1 cut(s) | 842 |
| Bsp1286I | GDGCHC | 3 cut(s) | 846, 1013, 1048 |
| Bsp19I | CCATGG | 2 cut(s) | 1902, 1989 |
| BspACI | CCGC | 1 cut(s) | 40 |
| BspANI | GGCC | 7 cut(s) | 353, 844, 1254, 1425, 1901, 1988, 2114 |
| BspCNI | CTCAG | 4 cut(s) | 61, 1792, 1873, 2233 |
| BspLI | GGNNCC | 1 cut(s) | 844 |
| BspMAI | CTGCAG | 2 cut(s) | 906, 920 |
| BspMI | ACCTGC | 1 cut(s) | 923 |
| BspPI | GGATC | 2 cut(s) | 650, 811 |
| BspQI | GCTCTTC | 3 cut(s) | 1567, 1695, 2169 |
| BspT104I | TTCGAA | 1 cut(s) | 437 |
| BsrDI | GCAATG | 1 cut(s) | 867 |
| BsrFI | RCCGGY | 1 cut(s) | 887 |
| BsrI | ACTGG | 4 cut(s) | 466, 1279, 1450, 2100 |
| BssAI | RCCGGY | 1 cut(s) | 887 |
| BssECI | CCNNGG | 3 cut(s) | 1902, 1989, 2358 |
| BssT1I | CCWWGG | 3 cut(s) | 1902, 1989, 2358 |
| Bst2UI | CCWGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| Bst4CI | ACNGT | 4 cut(s) | 286, 637, 666, 1595 |
| Bst6I | CTCTTC | 4 cut(s) | 1567, 1619, 1695, 2169 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1114 |
| BstBI | TTCGAA | 1 cut(s) | 437 |
| BstC8I | GCNNGC | 3 cut(s) | 113, 1546, 2101 |
| BstDEI | CTNAG | 7 cut(s) | 69, 219, 946, 1800, 1881, 2148, 2241 |
| BstDSI | CCRYGG | 2 cut(s) | 1902, 1989 |
| BstF5I | GGATG | 6 cut(s) | 403, 1024, 1099, 1565, 2191, 2354 |
| BstMAI | GTCTC | 3 cut(s) | 377, 1487, 2237 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 117, 578, 1114, 2264 |
| BstNI | CCWGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| BstNSI | RCATGY | 5 cut(s) | 319, 821, 1166, 1337, 1544 |
| BstSCI | CCNGG | 4 cut(s) | 348, 1896, 1983, 2041 |
| BstSFI | CTRYAG | 5 cut(s) | 206, 327, 902, 916, 2322 |
| BstSLI | GKGCMC | 1 cut(s) | 846 |
| BstV1I | GCAGC | 5 cut(s) | 428, 547, 1151, 1322, 2087 |
| BstX2I | RGATCY | 5 cut(s) | 550, 642, 803, 1059, 1681 |
| BstYI | RGATCY | 5 cut(s) | 550, 642, 803, 1059, 1681 |
| BsuRI | GGCC | 7 cut(s) | 353, 844, 1254, 1425, 1901, 1988, 2114 |
| BtgI | CCRYGG | 2 cut(s) | 1902, 1989 |
| BtgZI | GCGATG | 1 cut(s) | 486 |
| BtsCI | GGATG | 6 cut(s) | 403, 1024, 1099, 1565, 2191, 2354 |
| BtsIMutI | CAGTG | 1 cut(s) | 1600 |
| BveI | ACCTGC | 1 cut(s) | 923 |
| Cac8I | GCNNGC | 3 cut(s) | 113, 1546, 2101 |
| Cfr10I | RCCGGY | 1 cut(s) | 887 |
| Cfr13I | GGNCC | 4 cut(s) | 842, 843, 1293, 1464 |
| CseI | GACGC | 1 cut(s) | 1725 |
| Csp6I | GTAC | 5 cut(s) | 515, 699, 758, 1672, 2129 |
| CviQI | GTAC | 5 cut(s) | 515, 699, 758, 1672, 2129 |
| DdeI | CTNAG | 7 cut(s) | 69, 219, 946, 1800, 1881, 2148, 2241 |
| DraI | TTTAAA | 2 cut(s) | 655, 2119 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 941 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 941 |
| EaeI | YGGCCR | 1 cut(s) | 351 |
| Eam1104I | CTCTTC | 4 cut(s) | 1567, 1619, 1695, 2169 |
| EarI | CTCTTC | 4 cut(s) | 1567, 1619, 1695, 2169 |
| Eco130I | CCWWGG | 3 cut(s) | 1902, 1989, 2358 |
| Eco24I | GRGCYC | 1 cut(s) | 846 |
| Eco32I | GATATC | 1 cut(s) | 2026 |
| Eco47I | GGWCC | 2 cut(s) | 1293, 1464 |
| Eco57I | CTGAAG | 3 cut(s) | 44, 54, 2264 |
| EcoO109I | RGGNCCY | 3 cut(s) | 842, 1293, 1464 |
| EcoRII | CCWGG | 4 cut(s) | 348, 1896, 1983, 2041 |
| EcoRV | GATATC | 1 cut(s) | 2026 |
| EcoT14I | CCWWGG | 3 cut(s) | 1902, 1989, 2358 |
| EcoT38I | GRGCYC | 1 cut(s) | 846 |
| ErhI | CCWWGG | 3 cut(s) | 1902, 1989, 2358 |
| FalI | AAGNNNNNCTT | 8 cut(s) | 929, 961, 1563, 1595, 1625, 1657, 1689, 1721 |
| FaqI | GGGAC | 1 cut(s) | 1781 |
| FbaI | TGATCA | 3 cut(s) | 1597, 1918, 2005 |
| Fnu4HI | GCNGC | 5 cut(s) | 417, 536, 1140, 1311, 2076 |
| FokI | GGATG | 6 cut(s) | 410, 1011, 1106, 1552, 2198, 2341 |
| FriOI | GRGCYC | 1 cut(s) | 846 |
| Fsp4HI | GCNGC | 5 cut(s) | 417, 536, 1140, 1311, 2076 |
| FspBI | CTAG | 4 cut(s) | 807, 1014, 1041, 2343 |
| GluI | GCNGC | 5 cut(s) | 417, 536, 1140, 1311, 2076 |
| GsaI | CCCAGC | 2 cut(s) | 1225, 1396 |
| GsuI | CTGGAG | 4 cut(s) | 639, 1054, 1613, 2064 |
| HaeIII | GGCC | 7 cut(s) | 353, 844, 1254, 1425, 1901, 1988, 2114 |
| HapII | CCGG | 2 cut(s) | 888, 2183 |
| HgaI | GACGC | 1 cut(s) | 1725 |
| HincII | GTYRAC | 1 cut(s) | 321 |
| HindII | GTYRAC | 1 cut(s) | 321 |
| HindIII | AAGCTT | 1 cut(s) | 2276 |
| HinfI | GANTC | 5 cut(s) | 259, 272, 965, 1067, 1655 |
| HpaII | CCGG | 2 cut(s) | 888, 2183 |
| HphI | GGTGA | 6 cut(s) | 216, 265, 482, 1600, 1919, 2006 |
| Hpy166II | GTNNAC | 2 cut(s) | 321, 1591 |
| Hpy188I | TCNGA | 7 cut(s) | 642, 768, 1132, 1246, 1417, 1570, 1686 |
| Hpy8I | GTNNAC | 2 cut(s) | 321, 1591 |
| HpyCH4III | ACNGT | 4 cut(s) | 286, 637, 666, 1595 |
| HpyCH4IV | ACGT | 1 cut(s) | 1670 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 117, 578, 1114, 2264 |
| HpyF3I | CTNAG | 7 cut(s) | 69, 219, 946, 1800, 1881, 2148, 2241 |
| HpySE526I | ACGT | 1 cut(s) | 1670 |
| Ksp22I | TGATCA | 3 cut(s) | 1597, 1918, 2005 |
| LguI | GCTCTTC | 3 cut(s) | 1567, 1695, 2169 |
| Lsp1109I | GCAGC | 5 cut(s) | 428, 547, 1151, 1322, 2087 |
| LweI | GCATC | 8 cut(s) | 87, 900, 1084, 1235, 1406, 1728, 1867, 2319 |
| MaeI | CTAG | 4 cut(s) | 807, 1014, 1041, 2343 |
| MaeII | ACGT | 1 cut(s) | 1670 |
| MaeIII | GTNAC | 4 cut(s) | 222, 404, 470, 2373 |
| MfeI | CAATTG | 1 cut(s) | 189 |
| MflI | RGATCY | 5 cut(s) | 550, 642, 803, 1059, 1681 |
| MhlI | GDGCHC | 3 cut(s) | 846, 1013, 1048 |
| MlsI | TGGCCA | 1 cut(s) | 353 |
| MluNI | TGGCCA | 1 cut(s) | 353 |
| MlyI | GAGTC | 3 cut(s) | 959, 1061, 1649 |
| MnlI | CCTC | 7 cut(s) | 241, 328, 470, 955, 1084, 1252, 1423 |
| Mox20I | TGGCCA | 1 cut(s) | 353 |
| MroXI | GAANNNNTTC | 2 cut(s) | 342, 1608 |
| MscI | TGGCCA | 1 cut(s) | 353 |
| MslI | CAYNNNNRTG | 4 cut(s) | 83, 168, 411, 1949 |
| Msp20I | TGGCCA | 1 cut(s) | 353 |
| MspI | CCGG | 2 cut(s) | 888, 2183 |
| MspR9I | CCNGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| MunI | CAATTG | 1 cut(s) | 189 |
| Mva1269I | GAATGC | 1 cut(s) | 360 |
| MvaI | CCWGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 117, 578, 1114, 2264 |
| NcoI | CCATGG | 2 cut(s) | 1902, 1989 |
| NlaIV | GGNNCC | 1 cut(s) | 844 |
| NmuCI | GTSAC | 3 cut(s) | 222, 404, 470 |
| NspI | RCATGY | 5 cut(s) | 319, 821, 1166, 1337, 1544 |
| NspV | TTCGAA | 1 cut(s) | 437 |
| PciI | ACATGT | 4 cut(s) | 315, 817, 1162, 1333 |
| PciSI | GCTCTTC | 3 cut(s) | 1567, 1695, 2169 |
| PctI | GAATGC | 1 cut(s) | 360 |
| PdmI | GAANNNNTTC | 2 cut(s) | 342, 1608 |
| PfeI | GAWTC | 2 cut(s) | 259, 272 |
| PflMI | CCANNNNNTGG | 3 cut(s) | 398, 1903, 1990 |
| PfoI | TCCNGGA | 1 cut(s) | 2041 |
| PkrI | GCNGC | 5 cut(s) | 418, 537, 1141, 1312, 2077 |
| PleI | GAGTC | 3 cut(s) | 959, 1061, 1649 |
| PpsI | GAGTC | 3 cut(s) | 959, 1061, 1649 |
| PpuMI | RGGWCCY | 2 cut(s) | 1293, 1464 |
| PscI | ACATGT | 4 cut(s) | 315, 817, 1162, 1333 |
| Psp5II | RGGWCCY | 2 cut(s) | 1293, 1464 |
| Psp6I | CCWGG | 4 cut(s) | 348, 1896, 1983, 2041 |
| PspFI | CCCAGC | 2 cut(s) | 1221, 1392 |
| PspGI | CCWGG | 4 cut(s) | 348, 1896, 1983, 2041 |
| PspN4I | GGNNCC | 1 cut(s) | 844 |
| PspOMI | GGGCCC | 1 cut(s) | 842 |
| PspPI | GGNCC | 4 cut(s) | 842, 843, 1293, 1464 |
| PspPPI | RGGWCCY | 2 cut(s) | 1293, 1464 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 1738, 1770 |
| PstI | CTGCAG | 2 cut(s) | 906, 920 |
| PsuI | RGATCY | 5 cut(s) | 550, 642, 803, 1059, 1681 |
| RsaI | GTAC | 5 cut(s) | 516, 700, 759, 1673, 2130 |
| RsaNI | GTAC | 5 cut(s) | 515, 699, 758, 1672, 2129 |
| RseI | CAYNNNNRTG | 4 cut(s) | 83, 168, 411, 1949 |
| SapI | GCTCTTC | 3 cut(s) | 1567, 1695, 2169 |
| SatI | GCNGC | 5 cut(s) | 417, 536, 1140, 1311, 2076 |
| Sau96I | GGNCC | 4 cut(s) | 842, 843, 1293, 1464 |
| ScaI | AGTACT | 1 cut(s) | 2130 |
| SchI | GAGTC | 3 cut(s) | 959, 1061, 1649 |
| ScrFI | CCNGG | 4 cut(s) | 350, 1898, 1985, 2043 |
| SduI | GDGCHC | 3 cut(s) | 846, 1013, 1048 |
| SfaNI | GCATC | 8 cut(s) | 87, 900, 1084, 1235, 1406, 1728, 1867, 2319 |
| SfcI | CTRYAG | 5 cut(s) | 206, 327, 902, 916, 2322 |
| SfuI | TTCGAA | 1 cut(s) | 437 |
| SinI | GGWCC | 2 cut(s) | 1293, 1464 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 83, 168, 411, 1949 |
| SmlI | CTYRAG | 2 cut(s) | 784, 2314 |
| SmoI | CTYRAG | 2 cut(s) | 784, 2314 |
| SpeI | ACTAGT | 1 cut(s) | 1013 |
| SsiI | CCGC | 1 cut(s) | 40 |
| SspMI | CTAG | 4 cut(s) | 807, 1014, 1041, 2343 |
| StyD4I | CCNGG | 4 cut(s) | 348, 1896, 1983, 2041 |
| StyI | CCWWGG | 3 cut(s) | 1902, 1989, 2358 |
| TaaI | ACNGT | 4 cut(s) | 286, 637, 666, 1595 |
| TaiI | ACGT | 1 cut(s) | 1673 |
| TaqI | TCGA | 7 cut(s) | 81, 381, 437, 604, 933, 1553, 2028 |
| TatI | WGTACW | 3 cut(s) | 698, 757, 2128 |
| TfiI | GAWTC | 2 cut(s) | 259, 272 |
| TscAI | CASTG | 1 cut(s) | 1600 |
| TseFI | GTSAC | 3 cut(s) | 222, 404, 470 |
| TseI | GCWGC | 5 cut(s) | 416, 535, 1139, 1310, 2075 |
| Tsp45I | GTSAC | 3 cut(s) | 222, 404, 470 |
| TspGWI | ACGGA | 2 cut(s) | 489, 2241 |
| TspRI | CASTG | 1 cut(s) | 1600 |
| Van91I | CCANNNNNTGG | 3 cut(s) | 398, 1903, 1990 |
| VpaK11BI | GGWCC | 2 cut(s) | 1293, 1464 |
| XapI | RAATTY | 7 cut(s) | 293, 484, 673, 879, 1202, 1373, 1534 |
| XceI | RCATGY | 5 cut(s) | 319, 821, 1166, 1337, 1544 |
| XmnI | GAANNNNTTC | 2 cut(s) | 342, 1608 |
| XspI | CTAG | 4 cut(s) | 807, 1014, 1041, 2343 |
| ZrmI | AGTACT | 1 cut(s) | 2130 |