Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0008728

Physical Location & Seq

Genomic Coordinates Reverse (-)

82803531 .. 82811043

Gene Structure 7513 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00144930.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3012 bp

ATGTTTGTGAGAAAGCTTGTGGAGAAGGCTTCCAAGAAGCCTGGAGGAAGTTGTGATGGTCTAAAAGGTAGTGATATAGACCCGCGTGTAGTATTCCACAATGGAGTACCATCAGGATCTAACACTTTGGCTTATGACTCCATCCAAAAAATACTTGCAGTTTCCACTAAGGATGGCCGGATTAAGTTATTTGGTAAAGATAATGCTCAAGTGCTACTTGAGTCTATCAATGCAGTACCAAGCAAGTTCTTACAGTTTGTGGAGAATCAAGGTATACTTCTAAATGTAAATTCCAAGAACCACATTGAGGTTTGGGACTTGGAACAGAACCTATTGGCTCATGTACTTGCTTTTCATGAAGATATTACCTCCTTCACGGTCATGCAACAGAGTCTCTACATGTATGTTGGAGATTCTGTTGGGAATGTTTCAGTTCTGAAGCTTGAACAAGAATCATGTCATATATTACAAATGAAATACACTATACCTTATTCAGCTTCTCATGGGAATTCAACTGAAGTTTCAGGCGACACTGCGGTGATGCACATAATGCCTCAGCCAACAGCTGAAAGTAGGAGGGTTCTTGTAATATTTAGAGATGGTCTCATAGCGTTATGGGACATTAGAGAAAGTAAATCCATATTCACAGCTGGTGTAAATACATTGCAATCACTTCAGCATGAAACAAAGAAAGTCACTTCTGCATGCTGGGCATGTCCTTTTGGGAGTAAAGTTGTTGTTGGGTACAACAACGGAGAGATTTTCATCTGGAGCATTCCTTCGAACCCAAATCCATCGGAATGTAGCACGCAAAGTAGTCCAATATGTAAACTCAATCTTGGATACAAGTTGGACAAAATTCCTATAGCATCATTGAGATGGATTTATGCAGAAGGGAAGGCAAGTCGAATATATGTTATGGGCGCATCTGACATTGTTTCATCAAACTTGTTGCAGGTAATCCTGTTGAATGAGCATACTGAAGTCCGCACTATTAGATTAGGACTTCAGTTGCCTGAGCCTTGCATCGACATGGAGATTATTTCTTCAACCTTTAGCGAGCAAAGCAAACATAAACAAGAGTGCTTTCTTGTGCTTGGTAATTCAGGACATCTTTATGCCTATGATGATTGCTCAATTGAAAAATATCTTCTACAGAGCCAATCTAAGTCACCAGCCTCGTTGCCGAAGGAAGTCATGGAATACCTTCTCCTGGCCAAAAGCATTCCATCTCTCCTTTCTTTCGAGACAAAACCAAAGGATGGAAGTCACTTAAATGCAGCCCGTTTTAGTGGCTTTTCGAAAGTTAAAAATCTTTACATAACTGGACATGGTGACGGAGGCATAAATTTTTGGGATTTGTCATCGCCACTTTTAGTACCCATTTTATCATTGAAGCAGCAGAGTGAAGAAGATCTCTCTTTAAGTGGTATAGCACTCACAGCTTTGTTTTTTGATGGAAACTCTCGACTTCTTGTTTCTGGAGATCAAAGTGGAACGGTTCGGATCTTTAGATTTAAACCTGAACCGTATGCGAATTTCAGCAATTTCTTTCAAGGAAGTACAAAGAAAGGAAACGATATTGTTCAAAGCGTTAGACTAATGAAGGTTGATGGTTCTGTACTTTCTCTGAACATAAATCACAGCTCAAGACATCTTGCTGTGGGATCTAGTAAAGGACATGTTTCAGTTATTGATATAGAAGGGCCCACTCTATTATATAAAAGCCACATTGCAAGTGAAATTTCTACCGGCATCATCTCTCTGCAGTTTGAAACCTGCAGTTTTCATGGTTTCGACAAGAATGTCTTAGCTGTTGCAACAGAGGACTCATCTGTTTTGGCTCTTGATAGTGATAATGGAAACACATTGAGCACTAGTCTGGTTCATCCCAAGAAACCCTCTAGAGCACTTTTTATGCAGATCTTGGACTCCAGCAAAGGGAGTAGTGTTGAGGATGCCATGCAAAAGCAGTCTTTGCTACTGCTATGTTCTGAAAAAGCAGCATACATATATTCCTTCACACATGTCATGCAGGGAGTTAAGAAGGTAATATACAAGAAGAAATTTCAATCATCTTGTTGCTGGGCATCGACATTCTACACCTCTGATGTTGGCCTTATACTCGTTTTTACAACTGGAAAAATTGAGATAAGGTCCTTGCATGACTTATCTTTGATAAAGGAGACTTCAATAAGGGGCTTCACATACTCCACATCAAAACTAAATTCACATGCTGGCAATTCGATATGCTCTTCATCCGAAGGAGAACTTGTTATGGTGAACAGTGATCAGGAAATCTTTCTCTTCTCTCTCTCACTCCAGAAGCAAAGCTTTAGGCTTTTAGACTCTTTCAACTTGACGTACCAGAAAGATCTGATGGTTTCACAAGAAGAGCTTACATCAGGACGCATCATTCAAAAGGAAAAGAAAAAGGGTATGTTTAGTTCTGTTCTTAAAGATATTGTGGGAAGTAAAGGGAAGAATGTCCCTGAGATGGAAAATGAAGATACTAAAGAAAGTATTGAAGAACTTTCAAAAATCTTTTCAACTGCTAATTTCCAATTTGATGCTGAGAACACAGACAACCAGGCCATGGGTGAAGATGATGATCAGTTAGATATAGATGATATCGAGATTGACATTCCTGGAGAAAAACCGAAAGAGCAGAATATGTTGGCAGCTCTTAATAAGGAAAAACTGGCAAGCAAGTTTATGGCCTTTAAAGGTAAGGTACTGAAACAAATGAAGTCTAAGAATGAGAAAAATCCCCCAAAGGAAGAGCAACCGGATGAGAAGGTTGGCTCTGTTGATGAAATTAAGAGAAGATACGGATTTTCGTCTGCTGAGACAACAAATGTTGCTAAAATAGCAGAAAGTAAGCTTCAGGAGAATACAAGAAAGTTGCAGGGGATAAACTTGAGAACTACAGAGATGCAAGACACAGCTAGATCATTTTCATCCTTGGCAAAACAAGTGTTACGAACTGAACAGGATAGACGAGCCTCATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000149 GO:0002791 GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005886 GO:0008047 GO:0008150 GO:0012505 GO:0016020 GO:0017016 GO:0017075 GO:0017137 GO:0017157 GO:0019899 GO:0019905 GO:0030141 GO:0030234 GO:0030695 GO:0031267 GO:0031410 GO:0031982 GO:0032879 GO:0032880 GO:0043085 GO:0043087 GO:0043226 GO:0043227 GO:0043229 GO:0043547 GO:0044093 GO:0044424 GO:0044444 GO:0044464 GO:0045921 GO:0048518 GO:0048522 GO:0050708 GO:0050789 GO:0050790 GO:0050794 GO:0051020 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051223 GO:0051336 GO:0051345 GO:0060589 GO:0060627 GO:0065007 GO:0065009 GO:0070201 GO:0071944 GO:0090087 GO:0097708 GO:0098772 GO:0099503 GO:1903530 GO:1903532

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lgl_C

Protein Analysis

1003

Amino Acids

111.14

Weight (kDa)

6.55

Isoelectric Point (pI)

48.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008728)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G35560 AT4G35560
fragaria_vesca	FvH4_1g10310
malus_domestica	MD15G1231200.v1.1
prunus_persica	Prupe.7G183000_v2.0.a1
pyrus_communis	pycom15g20610
rosa_chinensis	RchiOBHm_Chr2g0097151
rosa_laevigata	RLG00000016707
rosa_multiflora	Rmu_sc0001182.1_g000007 Rmu_sc0013203.1_g000011
rosa_roxburghii	Rroxscaffold_2G00144930
rosa_rugosa	Rorug02G0064700.1 Rorug02G0064800
rosa_samantha	Rh1CG156700 Rh2AG111800 Rh2CG116100 Rh2DG115100 Rh4AG336200 Rh4DG120600 Rh4DG338700 Rh5DG319300 Rh7AG274900
rosa_wichuraiana	Rw2G008700

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1805
Acc36I	ACCTGC	2 cut(s)	946, 1787
AccB7I	CCANNNNNTGG	2 cut(s)	1262, 2596
AccI	GTMKAC	1 cut(s)	274
AccII	CGCG	1 cut(s)	85
AciI	CCGC	3 cut(s)	83, 536, 988
AclWI	GGATC	3 cut(s)	124, 1514, 1675
AcoI	YGGCCR	2 cut(s)	175, 1215
AcsI	RAATTY	8 cut(s)	289, 508, 858, 1348, 1537, 1743, 2066, 2227
AcuI	CTGAAG	6 cut(s)	458, 537, 659, 992, 1002, 2870
AfaI	GTAC	9 cut(s)	108, 237, 345, 746, 1380, 1564, 1623, 2366, 2736
AfiI	CCNNNNNNNGG	6 cut(s)	307, 1213, 1262, 1941, 2497, 2596
AflIII	ACRYGT	3 cut(s)	399, 1681, 2026
AhlI	ACTAGT	1 cut(s)	1877
AjnI	CCWGG	4 cut(s)	40, 1212, 2589, 2647
AleI	CACNNNNGTG	1 cut(s)	536
Alw21I	GWGCWC	2 cut(s)	1877, 1912
Alw26I	GTCTC	5 cut(s)	398, 608, 1241, 2180, 2843
AlwI	GGATC	3 cut(s)	124, 1514, 1675
AoxI	GGCC	6 cut(s)	175, 1215, 1706, 2116, 2592, 2718
ApaI	GGGCCC	1 cut(s)	1710
ApeKI	GCWGC	4 cut(s)	1280, 1399, 2003, 2681
ApoI	RAATTY	8 cut(s)	289, 508, 858, 1348, 1537, 1743, 2066, 2227
Asp700I	GAANNNNTTC	2 cut(s)	1206, 2301
AspLEI	GCGC	1 cut(s)	926
AspS9I	GGNCC	3 cut(s)	1706, 1707, 2157
AsuHPI	GGTGA	5 cut(s)	550, 1164, 1346, 2293, 2612
AsuII	TTCGAA	2 cut(s)	782, 1301
AvaII	GGWCC	1 cut(s)	2157
BaeGI	GKGCMC	1 cut(s)	1710
BalI	TGGCCA	1 cut(s)	1217
BanII	GRGCYC	1 cut(s)	1710
BarI	GAAGNNNNNNTAC	2 cut(s)	2039, 2071
Bbv12I	GWGCWC	2 cut(s)	1877, 1912
BbvCI	CCTCAGC	1 cut(s)	555
BbvI	GCAGC	4 cut(s)	1292, 1411, 2015, 2693
BciT130I	CCWGG	4 cut(s)	42, 1214, 2591, 2649
BciVI	GTATCC	1 cut(s)	836
BclI	TGATCA	2 cut(s)	2290, 2611
BcoDI	GTCTC	5 cut(s)	398, 608, 1241, 2180, 2843
BcuI	ACTAGT	1 cut(s)	1877
BfaI	CTAG	4 cut(s)	1671, 1878, 1905, 2949
BfmI	CTRYAG	5 cut(s)	864, 1154, 1766, 1780, 2928
BfuAI	ACCTGC	2 cut(s)	946, 1787
BfuI	GTATCC	1 cut(s)	836
BglII	AGATCT	3 cut(s)	1414, 1923, 2374
BisI	GCNGC	4 cut(s)	1281, 1400, 2004, 2682
BlsI	GCNGC	4 cut(s)	1282, 1401, 2005, 2683
Bme1390I	CCNGG	4 cut(s)	42, 1214, 2591, 2649
Bme18I	GGWCC	1 cut(s)	2157
BmgT120I	GGNCC	3 cut(s)	1706, 1707, 2157
BmiI	GGNNCC	1 cut(s)	1708
BmrFI	CCNGG	4 cut(s)	42, 1214, 2591, 2649
BplI	GAGNNNNNCTC	2 cut(s)	588, 620
BpmI	CTGGAG	6 cut(s)	63, 790, 1503, 1918, 2306, 2670
Bpu10I	CCTNAGC	2 cut(s)	555, 1017
Bpu14I	TTCGAA	2 cut(s)	782, 1301
BpuEI	CTTGAG	4 cut(s)	192, 239, 1633, 2941
BsaBI	GATNNNNATC	2 cut(s)	764, 2610
BsaI	GGTCTC	1 cut(s)	608
BsaJI	CCNNGG	2 cut(s)	2595, 2964
BsaWI	WCCGGW	1 cut(s)	2788
BsaXI	ACNNNNNCTCC	4 cut(s)	402, 432, 2259, 2289
Bsc4I	CCNNNNNNNGG	6 cut(s)	307, 1213, 1262, 1941, 2497, 2596
Bse118I	RCCGGY	1 cut(s)	1751
Bse1I	ACTGG	3 cut(s)	1330, 2143, 2706
Bse3DI	GCAATG	2 cut(s)	662, 1731
Bse8I	GATNNNNATC	2 cut(s)	764, 2610
BseBI	CCWGG	4 cut(s)	42, 1214, 2591, 2649
BseDI	CCNNGG	2 cut(s)	2595, 2964
BseGI	GGATG	8 cut(s)	141, 178, 1267, 1888, 1963, 2258, 2797, 2960
BseJI	GATNNNNATC	2 cut(s)	764, 2610
BseLI	CCNNNNNNNGG	6 cut(s)	307, 1213, 1262, 1941, 2497, 2596
BseMI	GCAATG	2 cut(s)	662, 1731
BseMII	CTCAG	5 cut(s)	569, 1008, 2484, 2565, 2838
BseNI	ACTGG	3 cut(s)	1330, 2143, 2706
BseSI	GKGCMC	1 cut(s)	1710
BseXI	GCAGC	4 cut(s)	1292, 1411, 2015, 2693
BseYI	CCCAGC	2 cut(s)	708, 2085
Bsh1236I	CGCG	1 cut(s)	85
BshFI	GGCC	6 cut(s)	177, 1217, 1708, 2118, 2594, 2720
BsiHKAI	GWGCWC	2 cut(s)	1877, 1912
BsiSI	CCGG	3 cut(s)	178, 1752, 2789
BslFI	GGGAC	3 cut(s)	329, 632, 2474
BslI	CCNNNNNNNGG	6 cut(s)	307, 1213, 1262, 1941, 2497, 2596
BsmAI	GTCTC	5 cut(s)	398, 608, 1241, 2180, 2843
BsmFI	GGGAC	3 cut(s)	329, 632, 2474
BsmI	GAATGC	2 cut(s)	774, 1224
BsnI	GGCC	6 cut(s)	177, 1217, 1708, 2118, 2594, 2720
Bso31I	GGTCTC	1 cut(s)	608
Bsp119I	TTCGAA	2 cut(s)	782, 1301
Bsp120I	GGGCCC	1 cut(s)	1706
Bsp1286I	GDGCHC	3 cut(s)	1710, 1877, 1912
Bsp19I	CCATGG	1 cut(s)	2595
BspACI	CCGC	3 cut(s)	83, 536, 988
BspANI	GGCC	6 cut(s)	177, 1217, 1708, 2118, 2594, 2720
BspCNI	CTCAG	5 cut(s)	568, 1009, 2485, 2566, 2839
BspFNI	CGCG	1 cut(s)	85
BspHI	TCATGA	1 cut(s)	355
BspLI	GGNNCC	1 cut(s)	1708
BspMAI	CTGCAG	2 cut(s)	1770, 1784
BspMI	ACCTGC	2 cut(s)	946, 1787
BspPI	GGATC	3 cut(s)	124, 1514, 1675
BspQI	GCTCTTC	3 cut(s)	2260, 2388, 2775
BspT104I	TTCGAA	2 cut(s)	782, 1301
BspTNI	GGTCTC	1 cut(s)	608
BsrDI	GCAATG	2 cut(s)	662, 1731
BsrFI	RCCGGY	1 cut(s)	1751
BsrI	ACTGG	3 cut(s)	1330, 2143, 2706
BssAI	RCCGGY	1 cut(s)	1751
BssECI	CCNNGG	2 cut(s)	2595, 2964
BssNAI	GTATAC	1 cut(s)	275
BssT1I	CCWWGG	2 cut(s)	2595, 2964
Bst1107I	GTATAC	1 cut(s)	275
Bst2UI	CCWGG	4 cut(s)	42, 1214, 2591, 2649
Bst4CI	ACNGT	5 cut(s)	255, 379, 1501, 1530, 2288
Bst6I	CTCTTC	4 cut(s)	2260, 2312, 2388, 2775
BstAPI	GCANNNNNTGC	2 cut(s)	550, 1978
BstBI	TTCGAA	2 cut(s)	782, 1301
BstC8I	GCNNGC	5 cut(s)	706, 809, 1061, 2239, 2707
BstDEI	CTNAG	9 cut(s)	168, 555, 1017, 1167, 1810, 2493, 2574, 2754, 2847
BstDSI	CCRYGG	1 cut(s)	2595
BstF5I	GGATG	8 cut(s)	141, 178, 1267, 1888, 1963, 2258, 2797, 2960
BstFNI	CGCG	1 cut(s)	85
BstHHI	GCGC	1 cut(s)	926
BstMAI	GTCTC	5 cut(s)	398, 608, 1241, 2180, 2843
BstMWI	GCNNNNNNNGC	6 cut(s)	550, 710, 1065, 1442, 1978, 2870
BstNI	CCWGG	4 cut(s)	42, 1214, 2591, 2649
BstNSI	RCATGY	6 cut(s)	403, 708, 717, 1685, 2030, 2237
BstSCI	CCNGG	4 cut(s)	40, 1212, 2589, 2647
BstSFI	CTRYAG	5 cut(s)	864, 1154, 1766, 1780, 2928
BstSLI	GKGCMC	1 cut(s)	1710
BstUI	CGCG	1 cut(s)	85
BstV1I	GCAGC	4 cut(s)	1292, 1411, 2015, 2693
BstX2I	RGATCY	6 cut(s)	116, 1414, 1506, 1667, 1923, 2374
BstYI	RGATCY	6 cut(s)	116, 1414, 1506, 1667, 1923, 2374
BstZ17I	GTATAC	1 cut(s)	275
BsuI	GTATCC	1 cut(s)	836
BsuRI	GGCC	6 cut(s)	177, 1217, 1708, 2118, 2594, 2720
BtgI	CCRYGG	1 cut(s)	2595
BtgZI	GCGATG	1 cut(s)	1350
BtsCI	GGATG	8 cut(s)	141, 178, 1267, 1888, 1963, 2258, 2797, 2960
BtsI	GCAGTG	1 cut(s)	531
BtsIMutI	CAGTG	2 cut(s)	531, 2293
BveI	ACCTGC	2 cut(s)	946, 1787
Cac8I	GCNNGC	5 cut(s)	706, 809, 1061, 2239, 2707
CciI	TCATGA	1 cut(s)	355
CfoI	GCGC	1 cut(s)	926
Cfr10I	RCCGGY	1 cut(s)	1751
Cfr13I	GGNCC	3 cut(s)	1706, 1707, 2157
CseI	GACGC	1 cut(s)	2418
Csp6I	GTAC	9 cut(s)	107, 236, 344, 745, 1379, 1563, 1622, 2365, 2735
CviQI	GTAC	9 cut(s)	107, 236, 344, 745, 1379, 1563, 1622, 2365, 2735
DdeI	CTNAG	9 cut(s)	168, 555, 1017, 1167, 1810, 2493, 2574, 2754, 2847
DraI	TTTAAA	2 cut(s)	1519, 2725
DrdI	GACNNNNNNGTC	1 cut(s)	1805
DseDI	GACNNNNNNGTC	1 cut(s)	1805
EaeI	YGGCCR	2 cut(s)	175, 1215
Eam1104I	CTCTTC	4 cut(s)	2260, 2312, 2388, 2775
EarI	CTCTTC	4 cut(s)	2260, 2312, 2388, 2775
Eco130I	CCWWGG	2 cut(s)	2595, 2964
Eco24I	GRGCYC	1 cut(s)	1710
Eco31I	GGTCTC	1 cut(s)	608
Eco32I	GATATC	1 cut(s)	2632
Eco47I	GGWCC	1 cut(s)	2157
Eco57I	CTGAAG	6 cut(s)	458, 537, 659, 992, 1002, 2870
EcoO109I	RGGNCCY	2 cut(s)	1706, 2157
EcoRI	GAATTC	1 cut(s)	508
EcoRII	CCWGG	4 cut(s)	40, 1212, 2589, 2647
EcoRV	GATATC	1 cut(s)	2632
EcoT14I	CCWWGG	2 cut(s)	2595, 2964
EcoT38I	GRGCYC	1 cut(s)	1710
ErhI	CCWWGG	2 cut(s)	2595, 2964
FaqI	GGGAC	3 cut(s)	329, 632, 2474
FauI	CCCGC	1 cut(s)	90
FbaI	TGATCA	2 cut(s)	2290, 2611
FblI	GTMKAC	1 cut(s)	274
Fnu4HI	GCNGC	4 cut(s)	1281, 1400, 2004, 2682
FokI	GGATG	8 cut(s)	128, 185, 1274, 1875, 1970, 2245, 2804, 2947
FriOI	GRGCYC	1 cut(s)	1710
Fsp4HI	GCNGC	4 cut(s)	1281, 1400, 2004, 2682
FspBI	CTAG	4 cut(s)	1671, 1878, 1905, 2949
GlaI	GCGC	1 cut(s)	925
GluI	GCNGC	4 cut(s)	1281, 1400, 2004, 2682
GsaI	CCCAGC	2 cut(s)	712, 2089
GsuI	CTGGAG	6 cut(s)	63, 790, 1503, 1918, 2306, 2670
HaeIII	GGCC	6 cut(s)	177, 1217, 1708, 2118, 2594, 2720
HapII	CCGG	3 cut(s)	178, 1752, 2789
HgaI	GACGC	1 cut(s)	2418
HhaI	GCGC	1 cut(s)	926
Hin6I	GCGC	1 cut(s)	924
HinP1I	GCGC	1 cut(s)	924
HindIII	AAGCTT	4 cut(s)	14, 440, 2332, 2882
HinfI	GANTC	9 cut(s)	137, 221, 265, 391, 413, 452, 1829, 1931, 2348
HpaII	CCGG	3 cut(s)	178, 1752, 2789
HphI	GGTGA	5 cut(s)	550, 1164, 1346, 2293, 2612
Hpy166II	GTNNAC	3 cut(s)	275, 830, 2284
Hpy188I	TCNGA	9 cut(s)	438, 799, 931, 1506, 1632, 1996, 2110, 2263, 2379
Hpy8I	GTNNAC	3 cut(s)	275, 830, 2284
HpyCH4III	ACNGT	5 cut(s)	255, 379, 1501, 1530, 2288
HpyCH4IV	ACGT	1 cut(s)	2363
HpyF10VI	GCNNNNNNNGC	6 cut(s)	550, 710, 1065, 1442, 1978, 2870
HpyF3I	CTNAG	9 cut(s)	168, 555, 1017, 1167, 1810, 2493, 2574, 2754, 2847
HpySE526I	ACGT	1 cut(s)	2363
HspAI	GCGC	1 cut(s)	924
Ksp22I	TGATCA	2 cut(s)	2290, 2611
LguI	GCTCTTC	3 cut(s)	2260, 2388, 2775
LmnI	GCTCC	1 cut(s)	771
Lsp1109I	GCAGC	4 cut(s)	1292, 1411, 2015, 2693
MaeI	CTAG	4 cut(s)	1671, 1878, 1905, 2949
MaeII	ACGT	1 cut(s)	2363
MaeIII	GTNAC	5 cut(s)	694, 1170, 1268, 1334, 2979
MfeI	CAATTG	1 cut(s)	1137
MflI	RGATCY	6 cut(s)	116, 1414, 1506, 1667, 1923, 2374
MhlI	GDGCHC	3 cut(s)	1710, 1877, 1912
MlsI	TGGCCA	1 cut(s)	1217
MluNI	TGGCCA	1 cut(s)	1217
MlyI	GAGTC	6 cut(s)	131, 230, 400, 1823, 1925, 2342
MmeI	TCCRAC	2 cut(s)	388, 831
Mox20I	TGGCCA	1 cut(s)	1217
MroXI	GAANNNNTTC	2 cut(s)	1206, 2301
MscI	TGGCCA	1 cut(s)	1217
MslI	CAYNNNNRTG	7 cut(s)	380, 536, 799, 877, 1031, 1116, 1275
Msp20I	TGGCCA	1 cut(s)	1217
MspA1I	CMGCKG	2 cut(s)	566, 650
MspI	CCGG	3 cut(s)	178, 1752, 2789
MspR9I	CCNGG	4 cut(s)	42, 1214, 2591, 2649
MunI	CAATTG	1 cut(s)	1137
Mva1269I	GAATGC	2 cut(s)	774, 1224
MvaI	CCWGG	4 cut(s)	42, 1214, 2591, 2649
MvnI	CGCG	1 cut(s)	85
MwoI	GCNNNNNNNGC	6 cut(s)	550, 710, 1065, 1442, 1978, 2870
NcoI	CCATGG	1 cut(s)	2595
NlaIV	GGNNCC	1 cut(s)	1708
NmuCI	GTSAC	4 cut(s)	694, 1170, 1268, 1334
NspI	RCATGY	6 cut(s)	403, 708, 717, 1685, 2030, 2237
NspV	TTCGAA	2 cut(s)	782, 1301
OliI	CACNNNNGTG	1 cut(s)	536
PaeI	GCATGC	1 cut(s)	708
PagI	TCATGA	1 cut(s)	355
PciI	ACATGT	3 cut(s)	399, 1681, 2026
PciSI	GCTCTTC	3 cut(s)	2260, 2388, 2775
PctI	GAATGC	2 cut(s)	774, 1224
PdmI	GAANNNNTTC	2 cut(s)	1206, 2301
PfeI	GAWTC	3 cut(s)	265, 413, 452
PflMI	CCANNNNNTGG	2 cut(s)	1262, 2596
PfoI	TCCNGGA	1 cut(s)	2647
PkrI	GCNGC	4 cut(s)	1282, 1401, 2005, 2683
PleI	GAGTC	6 cut(s)	131, 229, 399, 1823, 1925, 2342
PpsI	GAGTC	6 cut(s)	131, 229, 399, 1823, 1925, 2342
PpuMI	RGGWCCY	1 cut(s)	2157
PscI	ACATGT	3 cut(s)	399, 1681, 2026
Psp5II	RGGWCCY	1 cut(s)	2157
Psp6I	CCWGG	4 cut(s)	40, 1212, 2589, 2647
PspFI	CCCAGC	2 cut(s)	708, 2085
PspGI	CCWGG	4 cut(s)	40, 1212, 2589, 2647
PspN4I	GGNNCC	1 cut(s)	1708
PspOMI	GGGCCC	1 cut(s)	1706
PspPI	GGNCC	3 cut(s)	1706, 1707, 2157
PspPPI	RGGWCCY	1 cut(s)	2157
PsrI	GAACNNNNNNTAC	2 cut(s)	2431, 2463
PstI	CTGCAG	2 cut(s)	1770, 1784
PsuI	RGATCY	6 cut(s)	116, 1414, 1506, 1667, 1923, 2374
PvuII	CAGCTG	2 cut(s)	566, 650
RsaI	GTAC	9 cut(s)	108, 237, 345, 746, 1380, 1564, 1623, 2366, 2736
RsaNI	GTAC	9 cut(s)	107, 236, 344, 745, 1379, 1563, 1622, 2365, 2735
RseI	CAYNNNNRTG	7 cut(s)	380, 536, 799, 877, 1031, 1116, 1275
SapI	GCTCTTC	3 cut(s)	2260, 2388, 2775
SatI	GCNGC	4 cut(s)	1281, 1400, 2004, 2682
Sau96I	GGNCC	3 cut(s)	1706, 1707, 2157
SchI	GAGTC	6 cut(s)	131, 230, 400, 1823, 1925, 2342
ScrFI	CCNGG	4 cut(s)	42, 1214, 2591, 2649
SduI	GDGCHC	3 cut(s)	1710, 1877, 1912
SfcI	CTRYAG	5 cut(s)	864, 1154, 1766, 1780, 2928
SfuI	TTCGAA	2 cut(s)	782, 1301
SinI	GGWCC	1 cut(s)	2157
SmiMI	CAYNNNNRTG	7 cut(s)	380, 536, 799, 877, 1031, 1116, 1275
SmlI	CTYRAG	4 cut(s)	207, 218, 1648, 2920
SmoI	CTYRAG	4 cut(s)	207, 218, 1648, 2920
SpeI	ACTAGT	1 cut(s)	1877
SphI	GCATGC	1 cut(s)	708
SsiI	CCGC	3 cut(s)	83, 536, 988
SspI	AATATT	1 cut(s)	591
SspMI	CTAG	4 cut(s)	1671, 1878, 1905, 2949
StyD4I	CCNGG	4 cut(s)	40, 1212, 2589, 2647
StyI	CCWWGG	2 cut(s)	2595, 2964
TaaI	ACNGT	5 cut(s)	255, 379, 1501, 1530, 2288
TaiI	ACGT	1 cut(s)	2366
TatI	WGTACW	3 cut(s)	343, 1562, 1621
TfiI	GAWTC	3 cut(s)	265, 413, 452
TscAI	CASTG	2 cut(s)	538, 2293
TseFI	GTSAC	4 cut(s)	694, 1170, 1268, 1334
TseI	GCWGC	4 cut(s)	1280, 1399, 2003, 2681
Tsp45I	GTSAC	4 cut(s)	694, 1170, 1268, 1334
TspGWI	ACGGA	3 cut(s)	768, 1353, 2847
TspRI	CASTG	2 cut(s)	538, 2293
Van91I	CCANNNNNTGG	2 cut(s)	1262, 2596
VpaK11BI	GGWCC	1 cut(s)	2157
XapI	RAATTY	8 cut(s)	289, 508, 858, 1348, 1537, 1743, 2066, 2227
XbaI	TCTAGA	1 cut(s)	1904
XceI	RCATGY	6 cut(s)	403, 708, 717, 1685, 2030, 2237
XmiI	GTMKAC	1 cut(s)	274
XmnI	GAANNNNTTC	2 cut(s)	1206, 2301
XspI	CTAG	4 cut(s)	1671, 1878, 1905, 2949

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.