MD15G1418600.v1.1

Belongs to the ALG6 ALG8 glucosyltransferase family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
Physical Location & Seq
Reverse (-)
52006573 .. 52010572
4000 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1418600.v1.1.491

Sequence Viewer

Length: 1566 bp
ATGGACAAGACCTCCAAAAAGAAGGGTAATTTTAGAAAGGGCAAGGATGAAAAGCTGATTGTTGAATCTGATGGTTGGTGGTGGTTGATCCACAGGGGAATCACAGCTTCATTCTTGTCCATTGCATTGTTTTCCTTGTTGGTTCGAGCCGCGGTCTCGCTGCATCCTTACTCTGGTGCTGGAAATCCTCCCAAGTTTGGGGACTTTGAAGCACAGAGGCATTGGATGGAGATCACTATCAATCTCCCAATCAACCAATGGTATCGAAACAGTACGGTCAATGATCTCGGATACTGGGGTCTTGACTACCCTCCTCTCACTGCCTATCAGAGTTATGTTCATGGCCTTTTCCTCAGACATTTCAGTCCTGAGTCAGTTGCGCTTTTCGCTTCCCGTGGCCATGAGTCCTATTTGGGAAAACTACTCATGAGGTGGACGGTGTTGTCTTCTGATGCCTTGGTGTTCTTTCCTGCTGTTTTATACTTTGTTCTTGTTTACTATGCTGGTCAAAACCCAAGTCGCCGAAGGAGTGACATAGCGTGGCATATCACCATTATTTTACTCAATCCGTGTCTCATCCTAATTGATCATGGTCATTTCCAGTATAATTGCATCAGCTTGGGTCTGACTGTGGGAGCTATTGCCTCTGTTCTTTCGGATAAAGATCTTGTAGCCTGTGTCCTATACAGTCTTGCTCTAAACCACAAACAGATGAGTGCGTATTTTGCTCCTGCATTTTTCAGTCATCTCCTGGGTAAATGCCTAAGGCGCCGGTATCCTGTTCTAGAAGTGTTAAAACTTGGCCTTGTGGTCCTGGGAACGTTTGTTGTTGTATGGTGGCCGTATGTTCATTCAACGGAAGCCTTTTTTGGGGTTCTCTCTCGTCTTGCTCCTTTTGAGAGAGGGATATTTGAGGATTATGTAGCTAACTTTTGGTGCACCACTTCGGTTCTTGTAAAATGGAAGAGATTATTTCCGACACAGTCCCTGAAGCTTATCAGCTTGGGTGCAACTGTTTCTACTTTCCTGCCTTCAATGATTCAGCAGATATGGGCTCCGAGCAAGCCGGGTTTCCTTTATGGGTTGCTGAATAGTGCTTTCTCGTTTTATCTCTTCTCATTCCAAGTGCACGAGAAGTCTATTTTACTACCTCTCCTGCCAGCAAGTCTTTTGGCAATGGAAGAACCATTTCTTTTTACCTGGATGACACTTTACGCCTTGTTCTCAATGTTCCCTCTTCTACACCGTGACAAACTGGTTCTACCCTATCTTGCACTATCTGCTCTCTTTATCCTTTTAAACCATGTGCCGAATGGAAGACGGACCACTAGGGACACAAGCGCCTTGAGATCATTTGTGATCACAGTCTCTGTCTTGTGCTCAGTCGTTCTTCATGTTGTTTATCTAAGCCTGCATCCCCCTGCCCGGTATCCTTTCCTTTTTGAAGCTTTGATAATGCTCGTTTGCTTCTCCCAGTTCGTCATTCTTACTGTTTACACCAATGCAAAACAATGGATGTTGCTTAAACACTCCAACTTGGTAGATAAAGAAAAGAAGCTCCTTTGA

Protein Analysis

522

Amino Acids

59.52

Weight (kDa)

9.47

Isoelectric Point (pI)

39.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Alg6_Alg8 PF03155 46 - 497 1.2e-134 ALG6, ALG8 glycosyltransferase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 2 cut(s) 363, 442
AccB1I GGYRCC 1 cut(s) 768
AccII CGCG 1 cut(s) 152
AciI CCGC 2 cut(s) 150, 152
AclI AACGTT 1 cut(s) 821
AclWI GGATC 1 cut(s) 82
AcoI YGGCCR 2 cut(s) 397, 839
AcuI CTGAAG 1 cut(s) 1010
AcyI GRCGYC 1 cut(s) 769
AfaI GTAC 1 cut(s) 274
AfiI CCNNNNNNNGG 5 cut(s) 173, 197, 198, 870, 1425
AgsI TTSAA 5 cut(s) 65, 209, 855, 1035, 1445
AjnI CCWGG 3 cut(s) 750, 813, 1199
AjuI GAANNNNNNNTTGG 2 cut(s) 852, 884
AluBI AGCT 9 cut(s) 55, 107, 618, 638, 926, 994, 1002, 1448, 1558
AluI AGCT 9 cut(s) 55, 107, 618, 638, 926, 994, 1002, 1448, 1558
Alw21I GWGCWC 3 cut(s) 941, 1131, 1382
Alw26I GTCTC 3 cut(s) 160, 578, 1372
Alw44I GTGCAC 2 cut(s) 937, 1127
AlwI GGATC 1 cut(s) 82
AlwNI CAGNNNCTG 2 cut(s) 988, 1370
AoxI GGCC 4 cut(s) 343, 397, 802, 839
ApaLI GTGCAC 2 cut(s) 937, 1127
ApeKI GCWGC 1 cut(s) 160
ArsI GACNNNNNNTTYG 2 cut(s) 502, 534
Asp700I GAANNNNTTC 1 cut(s) 1188
AspLEI GCGC 3 cut(s) 382, 771, 1343
AspS9I GGNCC 2 cut(s) 811, 1323
AsuC2I CCSGG 2 cut(s) 1068, 1426
AsuHPI GGTGA 1 cut(s) 541
AvaII GGWCC 2 cut(s) 811, 1323
AxyI CCTNAGG 1 cut(s) 764
BaeGI GKGCMC 2 cut(s) 941, 1131
BaeI ACNNNNGTAYC 2 cut(s) 283, 316
BalI TGGCCA 1 cut(s) 399
BanI GGYRCC 1 cut(s) 768
BanII GRGCYC 1 cut(s) 1057
BauI CACGAG 1 cut(s) 1130
BbsI GAAGAC 2 cut(s) 438, 1324
Bbv12I GWGCWC 3 cut(s) 941, 1131, 1382
BbvI GCAGC 1 cut(s) 147
BccI CCATC 2 cut(s) 65, 220
BceAI ACGGC 1 cut(s) 826
BciT130I CCWGG 3 cut(s) 752, 815, 1201
BciVI GTATCC 3 cut(s) 284, 786, 1440
BclI TGATCA 2 cut(s) 586, 1359
BcnI CCSGG 2 cut(s) 1068, 1426
BcoDI GTCTC 3 cut(s) 160, 578, 1372
BfaI CTAG 2 cut(s) 785, 1329
BfoI RGCGCY 2 cut(s) 772, 1344
BfuI GTATCC 3 cut(s) 284, 786, 1440
BglII AGATCT 1 cut(s) 664
BisI GCNGC 2 cut(s) 150, 161
BlsI GCNGC 2 cut(s) 151, 162
Bme1390I CCNGG 5 cut(s) 752, 815, 1068, 1201, 1426
Bme18I GGWCC 2 cut(s) 811, 1323
BmgT120I GGNCC 2 cut(s) 811, 1323
BmiI GGNNCC 2 cut(s) 770, 1056
BmrFI CCNGG 5 cut(s) 752, 815, 1068, 1201, 1426
BmrI ACTGGG 2 cut(s) 304, 1468
BmsI GCATC 4 cut(s) 172, 442, 621, 1423
BmuI ACTGGG 2 cut(s) 304, 1468
BpiI GAAGAC 2 cut(s) 438, 1324
BpuEI CTTGAG 1 cut(s) 1366
BpuMI CCSGG 2 cut(s) 1068, 1426
BsaBI GATNNNNATC 3 cut(s) 230, 236, 663
BsaHI GRCGYC 1 cut(s) 769
BsaI GGTCTC 1 cut(s) 160
BsaJI CCNNGG 5 cut(s) 150, 394, 456, 751, 814
BsaXI ACNNNNNCTCC 3 cut(s) 26, 1137, 1167
Bsc4I CCNNNNNNNGG 5 cut(s) 173, 197, 198, 870, 1425
Bse118I RCCGGY 1 cut(s) 771
Bse1I ACTGG 4 cut(s) 299, 601, 1260, 1474
Bse21I CCTNAGG 1 cut(s) 764
Bse3DI GCAATG 2 cut(s) 120, 1182
Bse8I GATNNNNATC 3 cut(s) 230, 236, 663
BseBI CCWGG 3 cut(s) 752, 815, 1201
BseDI CCNNGG 5 cut(s) 150, 394, 456, 751, 814
BseGI GGATG 7 cut(s) 52, 163, 231, 576, 1209, 1414, 1521
BseJI GATNNNNATC 3 cut(s) 230, 236, 663
BseLI CCNNNNNNNGG 5 cut(s) 173, 197, 198, 870, 1425
BseMI GCAATG 2 cut(s) 120, 1182
BseMII CTCAG 3 cut(s) 360, 367, 1395
BseNI ACTGG 4 cut(s) 299, 601, 1260, 1474
BseRI GAGGAG 1 cut(s) 303
BseSI GKGCMC 2 cut(s) 941, 1131
BseXI GCAGC 1 cut(s) 147
Bsh1236I CGCG 1 cut(s) 152
BshFI GGCC 4 cut(s) 345, 399, 804, 841
BshNI GGYRCC 1 cut(s) 768
BsiHKAI GWGCWC 3 cut(s) 941, 1131, 1382
BsiSI CCGG 3 cut(s) 772, 1067, 1426
BslFI GGGAC 3 cut(s) 215, 970, 1346
BslI CCNNNNNNNGG 5 cut(s) 173, 197, 198, 870, 1425
BsmAI GTCTC 3 cut(s) 160, 578, 1372
BsmFI GGGAC 3 cut(s) 215, 970, 1346
BsnI GGCC 4 cut(s) 345, 399, 804, 841
Bso31I GGTCTC 1 cut(s) 160
Bsp1286I GDGCHC 4 cut(s) 941, 1057, 1131, 1382
Bsp143I GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
BspACI CCGC 2 cut(s) 150, 152
BspANI GGCC 4 cut(s) 345, 399, 804, 841
BspCNI CTCAG 3 cut(s) 361, 366, 1394
BspFNI CGCG 1 cut(s) 152
BspHI TCATGA 1 cut(s) 426
BspLI GGNNCC 2 cut(s) 770, 1056
BspPI GGATC 1 cut(s) 82
BspT107I GGYRCC 1 cut(s) 768
BspTNI GGTCTC 1 cut(s) 160
BsrDI GCAATG 2 cut(s) 120, 1182
BsrFI RCCGGY 1 cut(s) 771
BsrI ACTGG 4 cut(s) 299, 601, 1260, 1474
BssAI RCCGGY 1 cut(s) 771
BssECI CCNNGG 5 cut(s) 150, 394, 456, 751, 814
BssMI GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
BssNI GRCGYC 1 cut(s) 769
BssSI CACGAG 1 cut(s) 1130
BssT1I CCWWGG 1 cut(s) 456
Bst2BI CACGAG 1 cut(s) 1130
Bst2UI CCWGG 3 cut(s) 752, 815, 1201
Bst6I CTCTTC 3 cut(s) 959, 1118, 1242
BstACI GRCGYC 1 cut(s) 769
BstAPI GCANNNNNTGC 1 cut(s) 1280
BstC8I GCNNGC 3 cut(s) 1064, 1161, 1412
BstDEI CTNAG 5 cut(s) 353, 369, 764, 1381, 1406
BstDSI CCRYGG 2 cut(s) 150, 394
BstF5I GGATG 7 cut(s) 52, 163, 231, 576, 1209, 1414, 1521
BstFNI CGCG 1 cut(s) 152
BstH2I RGCGCY 2 cut(s) 772, 1344
BstHHI GCGC 3 cut(s) 382, 771, 1343
BstKTI GATC 7 cut(s) 90, 234, 286, 589, 667, 1352, 1362
BstMAI GTCTC 3 cut(s) 160, 578, 1372
BstMBI GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
BstMWI GCNNNNNNNGC 4 cut(s) 386, 725, 768, 1280
BstNI CCWGG 3 cut(s) 752, 815, 1201
BstSCI CCNGG 5 cut(s) 750, 813, 1066, 1199, 1424
BstSLI GKGCMC 2 cut(s) 941, 1131
BstUI CGCG 1 cut(s) 152
BstV1I GCAGC 1 cut(s) 147
BstV2I GAAGAC 2 cut(s) 438, 1324
BstX2I RGATCY 1 cut(s) 664
BstYI RGATCY 1 cut(s) 664
Bsu36I CCTNAGG 1 cut(s) 764
BsuI GTATCC 3 cut(s) 284, 786, 1440
BsuRI GGCC 4 cut(s) 345, 399, 804, 841
BtgI CCRYGG 2 cut(s) 150, 394
BtsCI GGATG 7 cut(s) 52, 163, 231, 576, 1209, 1414, 1521
BtsI GCAGTG 1 cut(s) 318
BtsIMutI CAGTG 1 cut(s) 318
Cac8I GCNNGC 3 cut(s) 1064, 1161, 1412
CaiI CAGNNNCTG 2 cut(s) 988, 1370
CciI TCATGA 1 cut(s) 426
CfoI GCGC 3 cut(s) 382, 771, 1343
Cfr10I RCCGGY 1 cut(s) 771
Cfr13I GGNCC 2 cut(s) 811, 1323
Cfr42I CCGCGG 1 cut(s) 153
Csp6I GTAC 1 cut(s) 273
CviAII CATG 6 cut(s) 341, 401, 427, 590, 1304, 1394
CviQI GTAC 1 cut(s) 273
DdeI CTNAG 5 cut(s) 353, 369, 764, 1381, 1406
DinI GGCGCC 1 cut(s) 770
DpnI GATC 7 cut(s) 89, 233, 285, 588, 666, 1351, 1361
DpnII GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
DraI TTTAAA 1 cut(s) 1299
DrdI GACNNNNNNGTC 2 cut(s) 363, 442
DseDI GACNNNNNNGTC 2 cut(s) 363, 442
EaeI YGGCCR 2 cut(s) 397, 839
Eam1104I CTCTTC 3 cut(s) 959, 1118, 1242
EarI CTCTTC 3 cut(s) 959, 1118, 1242
Eco130I CCWWGG 1 cut(s) 456
Eco24I GRGCYC 1 cut(s) 1057
Eco31I GGTCTC 1 cut(s) 160
Eco47I GGWCC 2 cut(s) 811, 1323
Eco57I CTGAAG 1 cut(s) 1010
Eco81I CCTNAGG 1 cut(s) 764
EcoRII CCWGG 3 cut(s) 750, 813, 1199
EcoT14I CCWWGG 1 cut(s) 456
EcoT38I GRGCYC 1 cut(s) 1057
EgeI GGCGCC 1 cut(s) 770
EheI GGCGCC 1 cut(s) 770
ErhI CCWWGG 1 cut(s) 456
FaeI CATG 6 cut(s) 344, 404, 430, 593, 1307, 1397
FaqI GGGAC 3 cut(s) 215, 970, 1346
FatI CATG 6 cut(s) 340, 400, 426, 589, 1303, 1393
FbaI TGATCA 2 cut(s) 586, 1359
Fnu4HI GCNGC 2 cut(s) 150, 161
FokI GGATG 7 cut(s) 59, 150, 238, 563, 1216, 1401, 1528
FriOI GRGCYC 1 cut(s) 1057
Fsp4HI GCNGC 2 cut(s) 150, 161
FspBI CTAG 2 cut(s) 785, 1329
GlaI GCGC 3 cut(s) 381, 770, 1342
GluI GCNGC 2 cut(s) 150, 161
HaeII RGCGCY 2 cut(s) 772, 1344
HaeIII GGCC 4 cut(s) 345, 399, 804, 841
HapII CCGG 3 cut(s) 772, 1067, 1426
HhaI GCGC 3 cut(s) 382, 771, 1343
Hin1I GRCGYC 1 cut(s) 769
Hin1II CATG 6 cut(s) 344, 404, 430, 593, 1307, 1397
Hin6I GCGC 3 cut(s) 380, 769, 1341
HinP1I GCGC 3 cut(s) 380, 769, 1341
HindIII AAGCTT 2 cut(s) 992, 1446
HinfI GANTC 5 cut(s) 65, 99, 371, 404, 1039
HpaII CCGG 3 cut(s) 772, 1067, 1426
HphI GGTGA 1 cut(s) 541
Hpy166II GTNNAC 5 cut(s) 435, 496, 939, 1129, 1495
Hpy188I TCNGA 9 cut(s) 70, 290, 330, 356, 451, 627, 658, 978, 1059
Hpy188III TCNNGA 4 cut(s) 302, 368, 427, 785
Hpy8I GTNNAC 5 cut(s) 435, 496, 939, 1129, 1495
HpyAV CCTTC 3 cut(s) 16, 519, 1041
HpyCH4IV ACGT 1 cut(s) 821
HpyF10VI GCNNNNNNNGC 4 cut(s) 386, 725, 768, 1280
HpyF3I CTNAG 5 cut(s) 353, 369, 764, 1381, 1406
HpySE526I ACGT 1 cut(s) 821
Hsp92I GRCGYC 1 cut(s) 769
Hsp92II CATG 6 cut(s) 344, 404, 430, 593, 1307, 1397
HspAI GCGC 3 cut(s) 380, 769, 1341
KasI GGCGCC 1 cut(s) 768
Ksp22I TGATCA 2 cut(s) 586, 1359
KspI CCGCGG 1 cut(s) 153
Kzo9I GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
LmnI GCTCC 5 cut(s) 635, 733, 895, 1060, 1563
Lsp1109I GCAGC 1 cut(s) 147
LweI GCATC 4 cut(s) 172, 442, 621, 1423
MaeI CTAG 2 cut(s) 785, 1329
MaeII ACGT 1 cut(s) 821
MaeIII GTNAC 2 cut(s) 530, 1247
MalI GATC 7 cut(s) 89, 233, 285, 588, 666, 1351, 1361
MboI GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
MboII GAAGA 7 cut(s) 438, 976, 1105, 1193, 1229, 1329, 1382
MflI RGATCY 1 cut(s) 664
MhlI GDGCHC 4 cut(s) 941, 1057, 1131, 1382
MlsI TGGCCA 1 cut(s) 399
MluCI AATT 3 cut(s) 28, 582, 607
MluNI TGGCCA 1 cut(s) 399
Mly113I GGCGCC 1 cut(s) 769
MlyI GAGTC 2 cut(s) 380, 413
MmeI TCCRAC 2 cut(s) 1001, 1557
Mox20I TGGCCA 1 cut(s) 399
MroXI GAANNNNTTC 1 cut(s) 1188
MscI TGGCCA 1 cut(s) 399
MseI TTAA 3 cut(s) 794, 1298, 1524
Msp20I TGGCCA 1 cut(s) 399
MspA1I CMGCKG 1 cut(s) 152
MspI CCGG 3 cut(s) 772, 1067, 1426
MspR9I CCNGG 5 cut(s) 752, 815, 1068, 1201, 1426
MvaI CCWGG 3 cut(s) 752, 815, 1201
MvnI CGCG 1 cut(s) 152
MwoI GCNNNNNNNGC 4 cut(s) 386, 725, 768, 1280
NarI GGCGCC 1 cut(s) 769
NciI CCSGG 2 cut(s) 1068, 1426
NdeII GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
NlaIII CATG 6 cut(s) 344, 404, 430, 593, 1307, 1397
NlaIV GGNNCC 2 cut(s) 770, 1056
NmuCI GTSAC 2 cut(s) 530, 1247
PagI TCATGA 1 cut(s) 426
PdmI GAANNNNTTC 1 cut(s) 1188
PfeI GAWTC 3 cut(s) 65, 99, 1039
PflFI GACNNNGTC 1 cut(s) 982
PkrI GCNGC 2 cut(s) 151, 162
PleI GAGTC 2 cut(s) 379, 412
PluTI GGCGCC 1 cut(s) 772
PpsI GAGTC 2 cut(s) 379, 412
Psp1406I AACGTT 1 cut(s) 821
Psp6I CCWGG 3 cut(s) 750, 813, 1199
PspGI CCWGG 3 cut(s) 750, 813, 1199
PspN4I GGNNCC 2 cut(s) 770, 1056
PspPI GGNCC 2 cut(s) 811, 1323
PstNI CAGNNNCTG 2 cut(s) 988, 1370
PsuI RGATCY 1 cut(s) 664
PsyI GACNNNGTC 1 cut(s) 982
RsaI GTAC 1 cut(s) 274
RsaNI GTAC 1 cut(s) 273
SacII CCGCGG 1 cut(s) 153
SaqAI TTAA 3 cut(s) 794, 1298, 1524
SatI GCNGC 2 cut(s) 150, 161
Sau3AI GATC 7 cut(s) 87, 231, 283, 586, 664, 1349, 1359
Sau96I GGNCC 2 cut(s) 811, 1323
SchI GAGTC 2 cut(s) 380, 413
ScrFI CCNGG 5 cut(s) 752, 815, 1068, 1201, 1426
SduI GDGCHC 4 cut(s) 941, 1057, 1131, 1382
SfaNI GCATC 4 cut(s) 172, 442, 621, 1423
SfoI GGCGCC 1 cut(s) 770
Sfr303I CCGCGG 1 cut(s) 153
SgrBI CCGCGG 1 cut(s) 153
SinI GGWCC 2 cut(s) 811, 1323
SmlI CTYRAG 1 cut(s) 1345
SmoI CTYRAG 1 cut(s) 1345
Sse9I AATT 3 cut(s) 28, 582, 607
SsiI CCGC 2 cut(s) 150, 152
SspDI GGCGCC 1 cut(s) 768
SspMI CTAG 2 cut(s) 785, 1329
StyD4I CCNGG 5 cut(s) 750, 813, 1066, 1199, 1424
StyI CCWWGG 1 cut(s) 456
TaiI ACGT 1 cut(s) 824
TaqI TCGA 2 cut(s) 145, 265
TasI AATT 3 cut(s) 28, 582, 607
TauI GCSGC 1 cut(s) 152
TfiI GAWTC 3 cut(s) 65, 99, 1039
Tru1I TTAA 3 cut(s) 794, 1298, 1524
Tru9I TTAA 3 cut(s) 794, 1298, 1524
TscAI CASTG 1 cut(s) 325
TseFI GTSAC 2 cut(s) 530, 1247
TseI GCWGC 1 cut(s) 160
Tsp45I GTSAC 2 cut(s) 530, 1247
TspDTI ATGAA 5 cut(s) 63, 99, 329, 839, 1382
TspGWI ACGGA 3 cut(s) 558, 872, 1336
TspRI CASTG 1 cut(s) 325
Tth111I GACNNNGTC 1 cut(s) 982
VneI GTGCAC 2 cut(s) 937, 1127
VpaK11BI GGWCC 2 cut(s) 811, 1323
XbaI TCTAGA 1 cut(s) 784
XcmI CCANNNNNNNNNTGG 2 cut(s) 255, 1310
XmnI GAANNNNTTC 1 cut(s) 1188
XspI CTAG 2 cut(s) 785, 1329
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.