Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0006191

Physical Location & Seq

Genomic Coordinates Reverse (-)

21577995 .. 21584529

Gene Structure 6535 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00234880.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1659 bp

ATGGTGGATTGGCGGATCGGATTGCTTTTAGGCGGATCGATTTGGTTTCATACGGATGCGGGTTTGCTTGATCGGTCGTCCCCGAGTCTGTCAAGGCGGCTTGTGGCGCTTCATCAAGGACCGACGATGGTGCGGCAGTGGTGGGGTGGCTACGGGGATGGTGGCTACGGGGATGGTCGATGCTTTGGTGATCAACCAGGCTTCCGCTTCTCTCCTCTCCTCTTGTTCAATTTCGCCTTCCAGAGGAGTCATCTTATTGGGGGGCTTGACAAGCCTCAGCTTCAGATCGCCGTTGAGCTTCAGCGGAAGACTCACTCTCGGACAAAAATGGCGAAGAGCTCAAAAAAGAGCAAAGAAGAAGAGGAGATTGTTGATTCTGGCGATGATGCTTGGTGGTGGTTGGTGCACAAGGGAATTACACCTTCATTCTTTTGCATTGCATTGTTTTCCCTTTTGGTTCGAGTCGCTGTCTCACTCCATCCTTACTCCGGTGCTGCAACTCCTCCCAAGTTCGGCGACTTTGAAGCCCAGCGGCATTGGATGGAAATCACCCTTAATCTCCCACTCAACGAATGGTATCGAAACACTACCCTCAATGATCTCAGCTACTGGGGTCTCGACTACCCTCCTCTCACTGCTTATCAGAGTTATGCCCATGGTCTTTTCATCAGATTCTTTAGTCCTGAATCAGTTGCTCTTTTCACTTCCCGCGGCCACGAGTCCTATTTGGGGAAACTTCTTATGAGGTGGACTGTGTTATCGTCTGATGCCTTGGTGTTCTTTCCTGCTGTTTTTTATTTTATTGTTGTTTACTATAGTGGGCGTAATCAAAGGGGCCGTATGGGTGGCATAGCATGGCACATTGCAATAATTTTACTCAATCCGTGCCTGATCTTAATTGATCACGGTCATTTCCAGTACAATTGCATCAGCTTGGGTCTGACTGTGGGAGCTATTGCTGCTATTCTTTCTGACAAAGATCTTCTAGCCTGTGTCTTATACAGCCTTGCTCTCAACCACAAACAGGAAGACTTGGGGAGCTGGCCAAATTATGGGATGTGGAGTAGGAAATTGGCCAATGAAATATTCAGGCCTGCCTGTAGAAGGGAACGTAGGGCGGTAAGTTTCTGGGATCCTGCAGGTGGAGAAAGTGAACAGGAGGATGTGTCAACTTGTGTCTTTCCTATGAGTGCGTATTTTGCTCCTGCATTTTTCAGCCATCTTCTGGGTAAATGTATAAGGCGCCGGTATCCAATTTTCGAAGTGTTTAAACTTGGCCTGGTGGTCTCAGGAACGTTTCTTGTTGTCTGGTGGCCATATATTCACTCAGTTGAAGCCTTTTTTGAGGTTCTCTCTCGTCTTGCTCCTTTTGAGAGAGGGATATATGAGGATTATGTGGCTAACTTTTGGTGCACCACTTCGGTTCTTGTAAAATGGAAGAGATTGTTTCCAACACATCAACTGAAGGTTCTCAGCCTTGGTGCAACTATTTCTACTTTTCTGCCTTCAATGATTCAGCAGATATGGGCTCCAAGTAAAAAAGGTTTCCTGTATGGGTTGCTGAATAGTGCTTTCTCATTTTATCTGTTCTCATTCCAAGGCAATGCACGAGAAGTCTATTTTGCTGCCTCTCCTACCAGCAAGTCTTTTGGCAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005789 GO:0006464 GO:0006486 GO:0006487 GO:0006490 GO:0006629 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009100 GO:0009101 GO:0009987 GO:0012505 GO:0016020 GO:0016740 GO:0016757 GO:0016758 GO:0019538 GO:0031984 GO:0034645 GO:0036211 GO:0042175 GO:0042281 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043413 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0046527 GO:0070085 GO:0071704 GO:0098827 GO:1901135 GO:1901137 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00510 ko01100 map00510 map01100

Pfam Domains

Protein Families

Alg6_Alg8

Protein Analysis

552

Amino Acids

62.85

Weight (kDa)

9.1

Isoelectric Point (pI)

43.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Alg6_Alg8	PF03155	151 - 343	6.2e-64	ALG6, ALG8 glycosyltransferase family
Alg6_Alg8	PF03155	396 - 533	3.1e-35	ALG6, ALG8 glycosyltransferase family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006191)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G38460 AT5G38460
fragaria_vesca	FvH4_5g30090
malus_domestica	MD15G1418600.v1.1
prunus_persica	Prupe.1G562700_v2.0.a1 Prupe.1G562700_v2.0.a1 Prupe.1G562700_v2.0.a1 Prupe.1G562700_v2.0.a1 Prupe.1G562700_v2.0.a1
pyrus_communis	pycom08g19630 pycom15g37160
rosa_chinensis	RchiOBHm_Chr7g0224281
rosa_laevigata	RLG00000001906
rosa_multiflora	Rmu_sc0017917.1_g000001 Rmu_sc0031737.1_g000001
rosa_roxburghii	Rroxscaffold_3G00234880
rosa_rugosa	Rorug07G0222200 Rorug07G0222300 Rorug07G0222400
rosa_samantha	Rh7AG367300 Rh7AG381200 Rh7BG358200 Rh7CG385600 Rh7CG400600 Rh7DG361200 Rh7DG367400
rosa_wichuraiana	Rw7G031090

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1130
Acc36I	ACCTGC	1 cut(s)	1130
AccB1I	GGYRCC	1 cut(s)	1242
AccB7I	CCANNNNNTGG	2 cut(s)	1052, 1225
AccII	CGCG	1 cut(s)	711
AclI	AACGTT	1 cut(s)	1295
AclWI	GGATC	4 cut(s)	23, 43, 1127, 1140
AcoI	YGGCCR	4 cut(s)	712, 1043, 1074, 1313
AcuI	CTGAAG	3 cut(s)	266, 284, 1484
AcyI	GRCGYC	1 cut(s)	1243
AfaI	GTAC	1 cut(s)	920
AfiI	CCNNNNNNNGG	9 cut(s)	243, 488, 512, 729, 1024, 1052, 1104, 1142, 1225
AgsI	TTSAA	4 cut(s)	229, 524, 1334, 1509
AjnI	CCWGG	2 cut(s)	196, 1278
AjuI	GAANNNNNNNTTGG	2 cut(s)	1070, 1102
AluBI	AGCT	7 cut(s)	280, 298, 339, 606, 933, 953, 1041
AluI	AGCT	7 cut(s)	280, 298, 339, 606, 933, 953, 1041
Alw21I	GWGCWC	3 cut(s)	341, 408, 1415
Alw26I	GTCTC	3 cut(s)	475, 620, 1291
Alw44I	GTGCAC	2 cut(s)	404, 1411
AlwI	GGATC	4 cut(s)	23, 43, 1127, 1140
AlwNI	CAGNNNCTG	1 cut(s)	609
Ama87I	CYCGRG	1 cut(s)	82
AoxI	GGCC	7 cut(s)	712, 835, 1043, 1074, 1091, 1276, 1313
ApaLI	GTGCAC	2 cut(s)	404, 1411
ApeKI	GCWGC	3 cut(s)	494, 959, 1625
AspLEI	GCGC	2 cut(s)	109, 1245
AspS9I	GGNCC	2 cut(s)	119, 835
AsuHPI	GGTGA	2 cut(s)	200, 541
AsuII	TTCGAA	1 cut(s)	1260
AvaI	CYCGRG	1 cut(s)	82
AvaII	GGWCC	1 cut(s)	119
BaeGI	GKGCMC	2 cut(s)	408, 1415
BalI	TGGCCA	3 cut(s)	1045, 1076, 1315
BamHI	GGATCC	1 cut(s)	1132
BanI	GGYRCC	1 cut(s)	1242
BanII	GRGCYC	2 cut(s)	341, 1531
BauI	CACGAG	2 cut(s)	716, 1608
BbsI	GAAGAC	2 cut(s)	314, 1035
Bbv12I	GWGCWC	3 cut(s)	341, 408, 1415
BbvCI	CCTCAGC	1 cut(s)	276
BbvI	GCAGC	3 cut(s)	481, 946, 1612
BccI	CCATC	6 cut(s)	121, 152, 167, 486, 535, 1227
BceAI	ACGGC	2 cut(s)	275, 822
BcgI	CGANNNNNNTGC	2 cut(s)	112, 146
BciT130I	CCWGG	2 cut(s)	198, 1280
BciVI	GTATCC	1 cut(s)	1260
BclI	TGATCA	2 cut(s)	190, 901
BcoDI	GTCTC	3 cut(s)	475, 620, 1291
BfaI	CTAG	1 cut(s)	986
BfmI	CTRYAG	3 cut(s)	814, 1099, 1137
BfoI	RGCGCY	2 cut(s)	110, 1246
BfuAI	ACCTGC	1 cut(s)	1130
BfuI	GTATCC	1 cut(s)	1260
BglII	AGATCT	1 cut(s)	979
BisI	GCNGC	7 cut(s)	98, 134, 495, 533, 712, 960, 1626
BlsI	GCNGC	7 cut(s)	99, 135, 496, 534, 713, 961, 1627
Bme1390I	CCNGG	2 cut(s)	198, 1280
Bme18I	GGWCC	1 cut(s)	119
BmeT110I	CYCGRG	1 cut(s)	82
BmgT120I	GGNCC	2 cut(s)	119, 835
BmiI	GGNNCC	4 cut(s)	836, 1134, 1244, 1530
BmrFI	CCNGG	2 cut(s)	198, 1280
BmrI	ACTGGG	1 cut(s)	619
BmsI	GCATC	5 cut(s)	46, 170, 376, 757, 936
BmuI	ACTGGG	1 cut(s)	619
BpiI	GAAGAC	2 cut(s)	314, 1035
BplI	GAGNNNNNCTC	2 cut(s)	1337, 1369
Bpu10I	CCTNAGC	1 cut(s)	276
Bpu14I	TTCGAA	1 cut(s)	1260
Bsa29I	ATCGAT	1 cut(s)	38
BsaBI	GATNNNNATC	1 cut(s)	545
BsaHI	GRCGYC	1 cut(s)	1243
BsaI	GGTCTC	2 cut(s)	620, 1291
BsaJI	CCNNGG	5 cut(s)	655, 709, 771, 1477, 1597
BsaWI	WCCGGW	1 cut(s)	488
BsaXI	ACNNNNNCTCC	2 cut(s)	1151, 1181
Bsc4I	CCNNNNNNNGG	9 cut(s)	243, 488, 512, 729, 1024, 1052, 1104, 1142, 1225
Bse118I	RCCGGY	1 cut(s)	1245
Bse1I	ACTGG	2 cut(s)	614, 916
Bse3DI	GCAATG	3 cut(s)	435, 861, 1609
Bse8I	GATNNNNATC	1 cut(s)	545
BseBI	CCWGG	2 cut(s)	198, 1280
BseCI	ATCGAT	1 cut(s)	38
BseDI	CCNNGG	5 cut(s)	655, 709, 771, 1477, 1597
BseGI	GGATG	7 cut(s)	61, 163, 178, 478, 546, 1062, 1168
BseJI	GATNNNNATC	1 cut(s)	545
BseLI	CCNNNNNNNGG	9 cut(s)	243, 488, 512, 729, 1024, 1052, 1104, 1142, 1225
BseMI	GCAATG	3 cut(s)	435, 861, 1609
BseMII	CTCAG	5 cut(s)	290, 616, 1302, 1341, 1486
BseNI	ACTGG	2 cut(s)	614, 916
BseRI	GAGGAG	6 cut(s)	204, 209, 259, 377, 492, 618
BseSI	GKGCMC	2 cut(s)	408, 1415
BseXI	GCAGC	3 cut(s)	481, 946, 1612
BseYI	CCCAGC	1 cut(s)	528
Bsh1236I	CGCG	1 cut(s)	711
Bsh1285I	CGRYCG	1 cut(s)	77
BshFI	GGCC	7 cut(s)	714, 837, 1045, 1076, 1093, 1278, 1315
BshNI	GGYRCC	1 cut(s)	1242
BshVI	ATCGAT	1 cut(s)	38
BsiEI	CGRYCG	1 cut(s)	77
BsiHKAI	GWGCWC	3 cut(s)	341, 408, 1415
BsiHKCI	CYCGRG	1 cut(s)	82
BsiSI	CCGG	2 cut(s)	489, 1246
BslFI	GGGAC	1 cut(s)	64
BslI	CCNNNNNNNGG	9 cut(s)	243, 488, 512, 729, 1024, 1052, 1104, 1142, 1225
BsmAI	GTCTC	3 cut(s)	475, 620, 1291
BsmFI	GGGAC	1 cut(s)	64
BsnI	GGCC	7 cut(s)	714, 837, 1045, 1076, 1093, 1278, 1315
Bso31I	GGTCTC	2 cut(s)	620, 1291
BsoBI	CYCGRG	1 cut(s)	82
Bsp119I	TTCGAA	1 cut(s)	1260
Bsp1286I	GDGCHC	4 cut(s)	341, 408, 1415, 1531
Bsp19I	CCATGG	1 cut(s)	655
BspANI	GGCC	7 cut(s)	714, 837, 1045, 1076, 1093, 1278, 1315
BspCNI	CTCAG	5 cut(s)	289, 615, 1301, 1340, 1485
BspDI	ATCGAT	1 cut(s)	38
BspFNI	CGCG	1 cut(s)	711
BspLI	GGNNCC	4 cut(s)	836, 1134, 1244, 1530
BspMAI	CTGCAG	1 cut(s)	1141
BspMI	ACCTGC	1 cut(s)	1130
BspPI	GGATC	4 cut(s)	23, 43, 1127, 1140
BspQI	GCTCTTC	1 cut(s)	329
BspT104I	TTCGAA	1 cut(s)	1260
BspT107I	GGYRCC	1 cut(s)	1242
BspTNI	GGTCTC	2 cut(s)	620, 1291
BsrDI	GCAATG	3 cut(s)	435, 861, 1609
BsrFI	RCCGGY	1 cut(s)	1245
BsrI	ACTGG	2 cut(s)	614, 916
BssAI	RCCGGY	1 cut(s)	1245
BssECI	CCNNGG	5 cut(s)	655, 709, 771, 1477, 1597
BssNI	GRCGYC	1 cut(s)	1243
BssSI	CACGAG	2 cut(s)	716, 1608
BssT1I	CCWWGG	4 cut(s)	655, 771, 1477, 1597
Bst2BI	CACGAG	2 cut(s)	716, 1608
Bst2UI	CCWGG	2 cut(s)	198, 1280
Bst4CI	ACNGT	3 cut(s)	754, 908, 946
Bst6I	CTCTTC	3 cut(s)	329, 354, 1433
BstACI	GRCGYC	1 cut(s)	1243
BstBI	TTCGAA	1 cut(s)	1260
BstC8I	GCNNGC	2 cut(s)	1043, 1095
BstDEI	CTNAG	5 cut(s)	276, 602, 1288, 1327, 1472
BstDSI	CCRYGG	2 cut(s)	655, 709
BstENI	CCTNNNNNAGG	2 cut(s)	241, 1102
BstF5I	GGATG	7 cut(s)	61, 163, 178, 478, 546, 1062, 1168
BstFNI	CGCG	1 cut(s)	711
BstH2I	RGCGCY	2 cut(s)	110, 1246
BstHHI	GCGC	2 cut(s)	109, 1245
BstMAI	GTCTC	3 cut(s)	475, 620, 1291
BstMCI	CGRYCG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	4 cut(s)	106, 271, 959, 1199
BstNI	CCWGG	2 cut(s)	198, 1280
BstSCI	CCNGG	2 cut(s)	196, 1278
BstSFI	CTRYAG	3 cut(s)	814, 1099, 1137
BstSLI	GKGCMC	2 cut(s)	408, 1415
BstUI	CGCG	1 cut(s)	711
BstV1I	GCAGC	3 cut(s)	481, 946, 1612
BstV2I	GAAGAC	2 cut(s)	314, 1035
BstX2I	RGATCY	2 cut(s)	979, 1132
BstYI	RGATCY	2 cut(s)	979, 1132
Bsu15I	ATCGAT	1 cut(s)	38
BsuI	GTATCC	1 cut(s)	1260
BsuRI	GGCC	7 cut(s)	714, 837, 1045, 1076, 1093, 1278, 1315
BsuTUI	ATCGAT	1 cut(s)	38
BtgI	CCRYGG	2 cut(s)	655, 709
BtgZI	GCGATG	1 cut(s)	396
BtsCI	GGATG	7 cut(s)	61, 163, 178, 478, 546, 1062, 1168
BtsI	GCAGTG	2 cut(s)	143, 633
BtsIMutI	CAGTG	2 cut(s)	143, 633
BveI	ACCTGC	1 cut(s)	1130
Cac8I	GCNNGC	2 cut(s)	1043, 1095
CaiI	CAGNNNCTG	1 cut(s)	609
CfoI	GCGC	2 cut(s)	109, 1245
Cfr10I	RCCGGY	1 cut(s)	1245
Cfr13I	GGNCC	2 cut(s)	119, 835
Cfr42I	CCGCGG	1 cut(s)	712
ClaI	ATCGAT	1 cut(s)	38
Csp6I	GTAC	1 cut(s)	919
CviAII	CATG	2 cut(s)	656, 855
CviQI	GTAC	1 cut(s)	919
DdeI	CTNAG	5 cut(s)	276, 602, 1288, 1327, 1472
DinI	GGCGCC	1 cut(s)	1244
DraI	TTTAAA	1 cut(s)	1270
EaeI	YGGCCR	4 cut(s)	712, 1043, 1074, 1313
Eam1104I	CTCTTC	3 cut(s)	329, 354, 1433
EarI	CTCTTC	3 cut(s)	329, 354, 1433
EciI	GGCGGA	2 cut(s)	28, 48
Ecl136II	GAGCTC	1 cut(s)	339
Eco130I	CCWWGG	4 cut(s)	655, 771, 1477, 1597
Eco147I	AGGCCT	1 cut(s)	1093
Eco24I	GRGCYC	2 cut(s)	341, 1531
Eco31I	GGTCTC	2 cut(s)	620, 1291
Eco47I	GGWCC	1 cut(s)	119
Eco53kI	GAGCTC	1 cut(s)	339
Eco57I	CTGAAG	3 cut(s)	266, 284, 1484
Eco88I	CYCGRG	1 cut(s)	82
EcoICRI	GAGCTC	1 cut(s)	339
EcoNI	CCTNNNNNAGG	2 cut(s)	241, 1102
EcoRII	CCWGG	2 cut(s)	196, 1278
EcoT14I	CCWWGG	4 cut(s)	655, 771, 1477, 1597
EcoT38I	GRGCYC	2 cut(s)	341, 1531
EgeI	GGCGCC	1 cut(s)	1244
EheI	GGCGCC	1 cut(s)	1244
ErhI	CCWWGG	4 cut(s)	655, 771, 1477, 1597
FaeI	CATG	2 cut(s)	659, 858
FaqI	GGGAC	1 cut(s)	64
FatI	CATG	2 cut(s)	655, 854
FauI	CCCGC	2 cut(s)	52, 716
FbaI	TGATCA	2 cut(s)	190, 901
Fnu4HI	GCNGC	7 cut(s)	98, 134, 495, 533, 712, 960, 1626
FokI	GGATG	7 cut(s)	68, 170, 185, 465, 553, 1069, 1175
FriOI	GRGCYC	2 cut(s)	341, 1531
Fsp4HI	GCNGC	7 cut(s)	98, 134, 495, 533, 712, 960, 1626
FspBI	CTAG	1 cut(s)	986
GlaI	GCGC	2 cut(s)	108, 1244
GluI	GCNGC	7 cut(s)	98, 134, 495, 533, 712, 960, 1626
GsaI	CCCAGC	1 cut(s)	532
HaeII	RGCGCY	2 cut(s)	110, 1246
HaeIII	GGCC	7 cut(s)	714, 837, 1045, 1076, 1093, 1278, 1315
HapII	CCGG	2 cut(s)	489, 1246
HhaI	GCGC	2 cut(s)	109, 1245
Hin1I	GRCGYC	1 cut(s)	1243
Hin1II	CATG	2 cut(s)	659, 858
Hin6I	GCGC	2 cut(s)	107, 1243
HinP1I	GCGC	2 cut(s)	107, 1243
HincII	GTYRAC	1 cut(s)	1170
HindII	GTYRAC	1 cut(s)	1170
HinfI	GANTC	9 cut(s)	85, 247, 310, 374, 462, 672, 686, 719, 1513
HpaII	CCGG	2 cut(s)	489, 1246
HphI	GGTGA	2 cut(s)	200, 541
Hpy166II	GTNNAC	6 cut(s)	406, 750, 811, 1154, 1170, 1413
Hpy188I	TCNGA	8 cut(s)	20, 285, 321, 645, 671, 766, 942, 973
Hpy188III	TCNNGA	4 cut(s)	241, 617, 683, 1290
Hpy8I	GTNNAC	6 cut(s)	406, 750, 811, 1154, 1170, 1413
Hpy99I	CGWCG	1 cut(s)	127
HpyAV	CCTTC	5 cut(s)	247, 432, 1098, 1459, 1515
HpyCH4III	ACNGT	3 cut(s)	754, 908, 946
HpyCH4IV	ACGT	2 cut(s)	1111, 1295
HpyF10VI	GCNNNNNNNGC	4 cut(s)	106, 271, 959, 1199
HpyF3I	CTNAG	5 cut(s)	276, 602, 1288, 1327, 1472
HpySE526I	ACGT	2 cut(s)	1111, 1295
Hsp92I	GRCGYC	1 cut(s)	1243
Hsp92II	CATG	2 cut(s)	659, 858
HspAI	GCGC	2 cut(s)	107, 1243
KasI	GGCGCC	1 cut(s)	1242
Ksp22I	TGATCA	2 cut(s)	190, 901
KspI	CCGCGG	1 cut(s)	712
LguI	GCTCTTC	1 cut(s)	329
LmnI	GCTCC	5 cut(s)	950, 1038, 1207, 1369, 1534
Lsp1109I	GCAGC	3 cut(s)	481, 946, 1612
LweI	GCATC	5 cut(s)	46, 170, 376, 757, 936
MaeI	CTAG	1 cut(s)	986
MaeII	ACGT	2 cut(s)	1111, 1295
MboII	GAAGA	8 cut(s)	319, 346, 368, 371, 974, 1040, 1214, 1450
MfeI	CAATTG	1 cut(s)	922
MflI	RGATCY	2 cut(s)	979, 1132
MhlI	GDGCHC	4 cut(s)	341, 408, 1415, 1531
MlsI	TGGCCA	3 cut(s)	1045, 1076, 1315
MluCI	AATT	8 cut(s)	229, 414, 870, 897, 922, 1048, 1070, 1254
MluNI	TGGCCA	3 cut(s)	1045, 1076, 1315
Mly113I	GGCGCC	1 cut(s)	1243
MlyI	GAGTC	5 cut(s)	94, 256, 304, 471, 728
MmeI	TCCRAC	1 cut(s)	1475
Mox20I	TGGCCA	3 cut(s)	1045, 1076, 1315
MscI	TGGCCA	3 cut(s)	1045, 1076, 1315
MseI	TTAA	3 cut(s)	555, 896, 1269
MslI	CAYNNNNRTG	1 cut(s)	54
Msp20I	TGGCCA	3 cut(s)	1045, 1076, 1315
MspA1I	CMGCKG	3 cut(s)	304, 532, 711
MspI	CCGG	2 cut(s)	489, 1246
MspR9I	CCNGG	2 cut(s)	198, 1280
MssI	GTTTAAAC	1 cut(s)	1270
MunI	CAATTG	1 cut(s)	922
MvaI	CCWGG	2 cut(s)	198, 1280
MvnI	CGCG	1 cut(s)	711
MwoI	GCNNNNNNNGC	4 cut(s)	106, 271, 959, 1199
NarI	GGCGCC	1 cut(s)	1243
NcoI	CCATGG	1 cut(s)	655
NlaIII	CATG	2 cut(s)	659, 858
NlaIV	GGNNCC	4 cut(s)	836, 1134, 1244, 1530
NspV	TTCGAA	1 cut(s)	1260
PaqCI	CACCTGC	1 cut(s)	1130
PceI	AGGCCT	1 cut(s)	1093
PciSI	GCTCTTC	1 cut(s)	329
PfeI	GAWTC	4 cut(s)	374, 672, 686, 1513
PflMI	CCANNNNNTGG	2 cut(s)	1052, 1225
PkrI	GCNGC	7 cut(s)	99, 135, 496, 534, 713, 961, 1627
PleI	GAGTC	5 cut(s)	93, 255, 304, 470, 727
PluTI	GGCGCC	1 cut(s)	1246
PmeI	GTTTAAAC	1 cut(s)	1270
PpsI	GAGTC	5 cut(s)	93, 255, 304, 470, 727
Psp124BI	GAGCTC	1 cut(s)	341
Psp1406I	AACGTT	1 cut(s)	1295
Psp6I	CCWGG	2 cut(s)	196, 1278
PspFI	CCCAGC	1 cut(s)	528
PspGI	CCWGG	2 cut(s)	196, 1278
PspN4I	GGNNCC	4 cut(s)	836, 1134, 1244, 1530
PspPI	GGNCC	2 cut(s)	119, 835
PstI	CTGCAG	1 cut(s)	1141
PstNI	CAGNNNCTG	1 cut(s)	609
PsuI	RGATCY	2 cut(s)	979, 1132
RsaI	GTAC	1 cut(s)	920
RsaNI	GTAC	1 cut(s)	919
RseI	CAYNNNNRTG	1 cut(s)	54
SacI	GAGCTC	1 cut(s)	341
SacII	CCGCGG	1 cut(s)	712
SapI	GCTCTTC	1 cut(s)	329
SaqAI	TTAA	3 cut(s)	555, 896, 1269
SatI	GCNGC	7 cut(s)	98, 134, 495, 533, 712, 960, 1626
Sau96I	GGNCC	2 cut(s)	119, 835
SbfI	CCTGCAGG	1 cut(s)	1141
SchI	GAGTC	5 cut(s)	94, 256, 304, 471, 728
ScrFI	CCNGG	2 cut(s)	198, 1280
SdaI	CCTGCAGG	1 cut(s)	1141
SduI	GDGCHC	4 cut(s)	341, 408, 1415, 1531
SfaNI	GCATC	5 cut(s)	46, 170, 376, 757, 936
SfcI	CTRYAG	3 cut(s)	814, 1099, 1137
SfoI	GGCGCC	1 cut(s)	1244
Sfr303I	CCGCGG	1 cut(s)	712
SfuI	TTCGAA	1 cut(s)	1260
SgrBI	CCGCGG	1 cut(s)	712
SinI	GGWCC	1 cut(s)	119
SmiMI	CAYNNNNRTG	1 cut(s)	54
Sse8387I	CCTGCAGG	1 cut(s)	1141
Sse9I	AATT	8 cut(s)	229, 414, 870, 897, 922, 1048, 1070, 1254
SseBI	AGGCCT	1 cut(s)	1093
SspDI	GGCGCC	1 cut(s)	1242
SspI	AATATT	1 cut(s)	1086
SspMI	CTAG	1 cut(s)	986
SstI	GAGCTC	1 cut(s)	341
StuI	AGGCCT	1 cut(s)	1093
StyD4I	CCNGG	2 cut(s)	196, 1278
StyI	CCWWGG	4 cut(s)	655, 771, 1477, 1597
TaaI	ACNGT	3 cut(s)	754, 908, 946
TaiI	ACGT	2 cut(s)	1114, 1298
TaqI	TCGA	6 cut(s)	38, 178, 460, 580, 618, 1260
TaqII	GACCGA	2 cut(s)	63, 136
TasI	AATT	8 cut(s)	229, 414, 870, 897, 922, 1048, 1070, 1254
TatI	WGTACW	1 cut(s)	918
TauI	GCSGC	4 cut(s)	100, 136, 535, 714
TfiI	GAWTC	4 cut(s)	374, 672, 686, 1513
Tru1I	TTAA	3 cut(s)	555, 896, 1269
Tru9I	TTAA	3 cut(s)	555, 896, 1269
TscAI	CASTG	2 cut(s)	143, 640
TseI	GCWGC	3 cut(s)	494, 959, 1625
TspDTI	ATGAA	5 cut(s)	38, 101, 414, 655, 1095
TspGWI	ACGGA	2 cut(s)	68, 873
TspRI	CASTG	2 cut(s)	143, 640
Van91I	CCANNNNNTGG	2 cut(s)	1052, 1225
VneI	GTGCAC	2 cut(s)	404, 1411
VpaK11BI	GGWCC	1 cut(s)	119
XagI	CCTNNNNNAGG	2 cut(s)	241, 1102
XcmI	CCANNNNNNNNNTGG	1 cut(s)	570
XspI	CTAG	1 cut(s)	986

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.