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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G04530 |
| fragaria_vesca | FvH4_4g04670 FvH4_4g04670 FvH4_4g04670 |
| malus_domestica | MD13G1221900.v1.1 MD16G1226800.v1.1 |
| prunus_persica | Prupe.1G049000_v2.0.a1 Prupe.1G049000_v2.0.a1 |
| pyrus_communis | pycom16g18990 |
| rosa_chinensis | RchiOBHm_Chr4g0395481 |
| rosa_laevigata | RLG00000009619 |
| rosa_multiflora | Rmu_sc0001951.1_g000004 Rmu_sc0003334.1_g000007 Rmu_sc0011701.1_g000033 |
| rosa_roxburghii | Rroxscaffold_5G00340420 |
| rosa_rugosa | Rorug03G0355800 Rorug03G0355900 |
| rosa_samantha | Rh4AG060500 Rh4AG062000 Rh4BG059400 Rh4CG065100 Rh4DG055400 |
| rosa_wichuraiana | Rw4G005060 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 675 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 32 |
| AccBSI | CCGCTC | 1 cut(s) | 654 |
| AciI | CCGC | 3 cut(s) | 575, 654, 1243 |
| AclWI | GGATC | 3 cut(s) | 508, 521, 1253 |
| AcsI | RAATTY | 2 cut(s) | 265, 1034 |
| AcuI | CTGAAG | 3 cut(s) | 786, 927, 1437 |
| AfaI | GTAC | 2 cut(s) | 543, 1467 |
| AfeI | AGCGCT | 1 cut(s) | 1486 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 32, 806 |
| AjnI | CCWGG | 2 cut(s) | 963, 1261 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 118, 150, 271, 303, 737, 769 |
| Alw21I | GWGCWC | 1 cut(s) | 76 |
| Alw26I | GTCTC | 1 cut(s) | 1206 |
| AlwI | GGATC | 3 cut(s) | 508, 521, 1253 |
| Ama87I | CYCGRG | 1 cut(s) | 349 |
| Aor51HI | AGCGCT | 1 cut(s) | 1486 |
| AoxI | GGCC | 4 cut(s) | 181, 396, 1245, 1444 |
| ApeKI | GCWGC | 8 cut(s) | 4, 572, 593, 844, 890, 1058, 1061, 1388 |
| ApoI | RAATTY | 2 cut(s) | 265, 1034 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 434, 466 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 258, 286 |
| AspLEI | GCGC | 2 cut(s) | 1285, 1487 |
| AspS9I | GGNCC | 2 cut(s) | 396, 1245 |
| AsuHPI | GGTGA | 4 cut(s) | 439, 500, 821, 1124 |
| AsuII | TTCGAA | 1 cut(s) | 262 |
| AvaI | CYCGRG | 1 cut(s) | 349 |
| AxyI | CCTNAGG | 1 cut(s) | 1368 |
| BamHI | GGATCC | 1 cut(s) | 513 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 525, 557 |
| BbsI | GAAGAC | 3 cut(s) | 279, 915, 1425 |
| Bbv12I | GWGCWC | 1 cut(s) | 76 |
| BbvCI | CCTCAGC | 1 cut(s) | 1122 |
| BbvI | GCAGC | 7 cut(s) | 580, 584, 856, 902, 1070, 1073, 1400 |
| BccI | CCATC | 7 cut(s) | 206, 424, 503, 676, 800, 858, 1051 |
| BceAI | ACGGC | 2 cut(s) | 900, 1337 |
| BciT130I | CCWGG | 2 cut(s) | 965, 1263 |
| BcoDI | GTCTC | 1 cut(s) | 1206 |
| BfaI | CTAG | 2 cut(s) | 791, 936 |
| BfoI | RGCGCY | 1 cut(s) | 1488 |
| BisI | GCNGC | 9 cut(s) | 5, 573, 594, 655, 845, 891, 1059, 1062, 1389 |
| BlpI | GCTNAGC | 1 cut(s) | 831 |
| BlsI | GCNGC | 9 cut(s) | 6, 574, 595, 656, 846, 892, 1060, 1063, 1390 |
| Bme1390I | CCNGG | 2 cut(s) | 965, 1263 |
| BmeT110I | CYCGRG | 1 cut(s) | 349 |
| BmgT120I | GGNCC | 2 cut(s) | 396, 1245 |
| BmiI | GGNNCC | 3 cut(s) | 515, 1102, 1477 |
| BmrFI | CCNGG | 2 cut(s) | 965, 1263 |
| BmrI | ACTGGG | 1 cut(s) | 20 |
| BmsI | GCATC | 1 cut(s) | 601 |
| BmuI | ACTGGG | 1 cut(s) | 20 |
| BpiI | GAAGAC | 3 cut(s) | 279, 915, 1425 |
| BpmI | CTGGAG | 2 cut(s) | 410, 1087 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1122 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 831 |
| Bpu14I | TTCGAA | 1 cut(s) | 262 |
| BpuEI | CTTGAG | 5 cut(s) | 714, 786, 842, 879, 892 |
| Bsa29I | ATCGAT | 1 cut(s) | 645 |
| BsaBI | GATNNNNATC | 1 cut(s) | 693 |
| BsaI | GGTCTC | 1 cut(s) | 1206 |
| BsaJI | CCNNGG | 4 cut(s) | 744, 757, 1206, 1262 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 32, 806 |
| Bse1I | ACTGG | 3 cut(s) | 26, 393, 1302 |
| Bse21I | CCTNAGG | 1 cut(s) | 1368 |
| Bse3DI | GCAATG | 2 cut(s) | 664, 1053 |
| Bse8I | GATNNNNATC | 1 cut(s) | 693 |
| BseBI | CCWGG | 2 cut(s) | 965, 1263 |
| BseCI | ATCGAT | 1 cut(s) | 645 |
| BseDI | CCNNGG | 4 cut(s) | 744, 757, 1206, 1262 |
| BseGI | GGATG | 7 cut(s) | 47, 514, 616, 625, 687, 964, 1043 |
| BseJI | GATNNNNATC | 1 cut(s) | 693 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 32, 806 |
| BseMI | GCAATG | 2 cut(s) | 664, 1053 |
| BseMII | CTCAG | 5 cut(s) | 22, 69, 1113, 1202, 1359 |
| BseNI | ACTGG | 3 cut(s) | 26, 393, 1302 |
| BseRI | GAGGAG | 4 cut(s) | 32, 494, 680, 1139 |
| BseXI | GCAGC | 7 cut(s) | 580, 584, 856, 902, 1070, 1073, 1400 |
| BsgI | GTGCAG | 1 cut(s) | 909 |
| BshFI | GGCC | 4 cut(s) | 183, 398, 1247, 1446 |
| BshVI | ATCGAT | 1 cut(s) | 645 |
| BsiHKAI | GWGCWC | 1 cut(s) | 76 |
| BsiHKCI | CYCGRG | 1 cut(s) | 349 |
| BslFI | GGGAC | 3 cut(s) | 48, 455, 1280 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 32, 806 |
| BsmAI | GTCTC | 1 cut(s) | 1206 |
| BsmFI | GGGAC | 3 cut(s) | 48, 455, 1280 |
| BsmI | GAATGC | 1 cut(s) | 1498 |
| BsnI | GGCC | 4 cut(s) | 183, 398, 1247, 1446 |
| Bso31I | GGTCTC | 1 cut(s) | 1206 |
| BsoBI | CYCGRG | 1 cut(s) | 349 |
| Bsp119I | TTCGAA | 1 cut(s) | 262 |
| Bsp1286I | GDGCHC | 1 cut(s) | 76 |
| Bsp143I | GATC | 3 cut(s) | 376, 513, 1258 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 831 |
| Bsp19I | CCATGG | 1 cut(s) | 757 |
| BspACI | CCGC | 3 cut(s) | 575, 654, 1243 |
| BspANI | GGCC | 4 cut(s) | 183, 398, 1247, 1446 |
| BspCNI | CTCAG | 5 cut(s) | 21, 68, 1114, 1201, 1360 |
| BspDI | ATCGAT | 1 cut(s) | 645 |
| BspHI | TCATGA | 2 cut(s) | 853, 1315 |
| BspLI | GGNNCC | 3 cut(s) | 515, 1102, 1477 |
| BspPI | GGATC | 3 cut(s) | 508, 521, 1253 |
| BspT104I | TTCGAA | 1 cut(s) | 262 |
| BspTNI | GGTCTC | 1 cut(s) | 1206 |
| BsrBI | CCGCTC | 1 cut(s) | 654 |
| BsrDI | GCAATG | 2 cut(s) | 664, 1053 |
| BsrI | ACTGG | 3 cut(s) | 26, 393, 1302 |
| BssECI | CCNNGG | 4 cut(s) | 744, 757, 1206, 1262 |
| BssMI | GATC | 3 cut(s) | 376, 513, 1258 |
| BssT1I | CCWWGG | 3 cut(s) | 744, 757, 1206 |
| Bst2UI | CCWGG | 2 cut(s) | 965, 1263 |
| Bst4CI | ACNGT | 4 cut(s) | 62, 1271, 1322, 1435 |
| Bst6I | CTCTTC | 6 cut(s) | 121, 249, 455, 486, 1102, 1143 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1394 |
| BstBI | TTCGAA | 1 cut(s) | 262 |
| BstC8I | GCNNGC | 5 cut(s) | 201, 783, 1099, 1245, 1254 |
| BstDEI | CTNAG | 8 cut(s) | 8, 55, 716, 831, 1122, 1175, 1188, 1368 |
| BstDSI | CCRYGG | 1 cut(s) | 757 |
| BstF5I | GGATG | 7 cut(s) | 47, 514, 616, 625, 687, 964, 1043 |
| BstH2I | RGCGCY | 1 cut(s) | 1488 |
| BstHHI | GCGC | 2 cut(s) | 1285, 1487 |
| BstKTI | GATC | 3 cut(s) | 379, 516, 1261 |
| BstMAI | GTCTC | 1 cut(s) | 1206 |
| BstMBI | GATC | 3 cut(s) | 376, 513, 1258 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 791, 841, 896, 1249, 1253, 1289, 1358, 1394, 1493 |
| BstNI | CCWGG | 2 cut(s) | 965, 1263 |
| BstNSI | RCATGY | 1 cut(s) | 1081 |
| BstSCI | CCNGG | 2 cut(s) | 963, 1261 |
| BstV1I | GCAGC | 7 cut(s) | 580, 584, 856, 902, 1070, 1073, 1400 |
| BstV2I | GAAGAC | 3 cut(s) | 279, 915, 1425 |
| BstX2I | RGATCY | 1 cut(s) | 513 |
| BstYI | RGATCY | 1 cut(s) | 513 |
| Bsu15I | ATCGAT | 1 cut(s) | 645 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1368 |
| BsuRI | GGCC | 4 cut(s) | 183, 398, 1247, 1446 |
| BsuTUI | ATCGAT | 1 cut(s) | 645 |
| BtgI | CCRYGG | 1 cut(s) | 757 |
| BtgZI | GCGATG | 1 cut(s) | 65 |
| BtsCI | GGATG | 7 cut(s) | 47, 514, 616, 625, 687, 964, 1043 |
| BtsIMutI | CAGTG | 3 cut(s) | 386, 1276, 1327 |
| Cac8I | GCNNGC | 5 cut(s) | 201, 783, 1099, 1245, 1254 |
| CciI | TCATGA | 2 cut(s) | 853, 1315 |
| CfoI | GCGC | 2 cut(s) | 1285, 1487 |
| Cfr13I | GGNCC | 2 cut(s) | 396, 1245 |
| ClaI | ATCGAT | 1 cut(s) | 645 |
| Csp6I | GTAC | 2 cut(s) | 542, 1466 |
| CviQI | GTAC | 2 cut(s) | 542, 1466 |
| DdeI | CTNAG | 8 cut(s) | 8, 55, 716, 831, 1122, 1175, 1188, 1368 |
| DpnI | GATC | 3 cut(s) | 378, 515, 1260 |
| DpnII | GATC | 3 cut(s) | 376, 513, 1258 |
| Eam1104I | CTCTTC | 6 cut(s) | 121, 249, 455, 486, 1102, 1143 |
| EarI | CTCTTC | 6 cut(s) | 121, 249, 455, 486, 1102, 1143 |
| Eco130I | CCWWGG | 3 cut(s) | 744, 757, 1206 |
| Eco147I | AGGCCT | 1 cut(s) | 183 |
| Eco31I | GGTCTC | 1 cut(s) | 1206 |
| Eco47III | AGCGCT | 1 cut(s) | 1486 |
| Eco57I | CTGAAG | 3 cut(s) | 786, 927, 1437 |
| Eco81I | CCTNAGG | 1 cut(s) | 1368 |
| Eco88I | CYCGRG | 1 cut(s) | 349 |
| EcoRII | CCWGG | 2 cut(s) | 963, 1261 |
| EcoT14I | CCWWGG | 3 cut(s) | 744, 757, 1206 |
| ErhI | CCWWGG | 3 cut(s) | 744, 757, 1206 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 271, 303 |
| FaqI | GGGAC | 3 cut(s) | 48, 455, 1280 |
| FauI | CCCGC | 2 cut(s) | 568, 1236 |
| FauNDI | CATATG | 2 cut(s) | 931, 1393 |
| Fnu4HI | GCNGC | 9 cut(s) | 5, 573, 594, 655, 845, 891, 1059, 1062, 1389 |
| FokI | GGATG | 7 cut(s) | 34, 521, 623, 632, 694, 971, 1030 |
| Fsp4HI | GCNGC | 9 cut(s) | 5, 573, 594, 655, 845, 891, 1059, 1062, 1389 |
| FspBI | CTAG | 2 cut(s) | 791, 936 |
| GlaI | GCGC | 2 cut(s) | 1284, 1486 |
| GluI | GCNGC | 9 cut(s) | 5, 573, 594, 655, 845, 891, 1059, 1062, 1389 |
| GsuI | CTGGAG | 2 cut(s) | 410, 1087 |
| HaeII | RGCGCY | 1 cut(s) | 1488 |
| HaeIII | GGCC | 4 cut(s) | 183, 398, 1247, 1446 |
| HhaI | GCGC | 2 cut(s) | 1285, 1487 |
| Hin6I | GCGC | 2 cut(s) | 1283, 1485 |
| HinP1I | GCGC | 2 cut(s) | 1283, 1485 |
| HincII | GTYRAC | 1 cut(s) | 361 |
| HindII | GTYRAC | 1 cut(s) | 361 |
| HindIII | AAGCTT | 1 cut(s) | 732 |
| HinfI | GANTC | 6 cut(s) | 167, 193, 422, 796, 812, 1153 |
| HphI | GGTGA | 4 cut(s) | 439, 500, 821, 1124 |
| Hpy166II | GTNNAC | 1 cut(s) | 361 |
| Hpy188I | TCNGA | 5 cut(s) | 11, 58, 211, 376, 1347 |
| Hpy8I | GTNNAC | 1 cut(s) | 361 |
| HpyAV | CCTTC | 6 cut(s) | 61, 218, 478, 494, 1226, 1321 |
| HpyCH4III | ACNGT | 4 cut(s) | 62, 1271, 1322, 1435 |
| HpyCH4IV | ACGT | 3 cut(s) | 284, 544, 886 |
| HpyCH4V | TGCA | 9 cut(s) | 111, 275, 551, 572, 890, 1058, 1252, 1388, 1441 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 791, 841, 896, 1249, 1253, 1289, 1358, 1394, 1493 |
| HpyF3I | CTNAG | 8 cut(s) | 8, 55, 716, 831, 1122, 1175, 1188, 1368 |
| HpySE526I | ACGT | 3 cut(s) | 284, 544, 886 |
| HspAI | GCGC | 2 cut(s) | 1283, 1485 |
| Kzo9I | GATC | 3 cut(s) | 376, 513, 1258 |
| LmnI | GCTCC | 5 cut(s) | 331, 761, 852, 1106, 1223 |
| Lsp1109I | GCAGC | 7 cut(s) | 580, 584, 856, 902, 1070, 1073, 1400 |
| LweI | GCATC | 1 cut(s) | 601 |
| MaeI | CTAG | 2 cut(s) | 791, 936 |
| MaeII | ACGT | 3 cut(s) | 284, 544, 886 |
| MaeIII | GTNAC | 2 cut(s) | 245, 875 |
| MalI | GATC | 3 cut(s) | 378, 515, 1260 |
| MbiI | CCGCTC | 1 cut(s) | 654 |
| MboI | GATC | 3 cut(s) | 376, 513, 1258 |
| MflI | RGATCY | 1 cut(s) | 513 |
| MhlI | GDGCHC | 1 cut(s) | 76 |
| MluCI | AATT | 8 cut(s) | 265, 307, 626, 721, 1012, 1034, 1129, 1180 |
| MlyI | GAGTC | 1 cut(s) | 821 |
| MroXI | GAANNNNTTC | 2 cut(s) | 258, 286 |
| MseI | TTAA | 1 cut(s) | 234 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1320, 1454 |
| MspA1I | CMGCKG | 1 cut(s) | 575 |
| MspR9I | CCNGG | 2 cut(s) | 965, 1263 |
| Mva1269I | GAATGC | 1 cut(s) | 1498 |
| MvaI | CCWGG | 2 cut(s) | 965, 1263 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 791, 841, 896, 1249, 1253, 1289, 1358, 1394, 1493 |
| NcoI | CCATGG | 1 cut(s) | 757 |
| NdeI | CATATG | 2 cut(s) | 931, 1393 |
| NdeII | GATC | 3 cut(s) | 376, 513, 1258 |
| NlaIV | GGNNCC | 3 cut(s) | 515, 1102, 1477 |
| NmuCI | GTSAC | 1 cut(s) | 245 |
| NspI | RCATGY | 1 cut(s) | 1081 |
| NspV | TTCGAA | 1 cut(s) | 262 |
| PagI | TCATGA | 2 cut(s) | 853, 1315 |
| PceI | AGGCCT | 1 cut(s) | 183 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1089 |
| PctI | GAATGC | 1 cut(s) | 1498 |
| PdmI | GAANNNNTTC | 2 cut(s) | 258, 286 |
| PfeI | GAWTC | 5 cut(s) | 167, 193, 422, 796, 1153 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 32 |
| PkrI | GCNGC | 9 cut(s) | 6, 574, 595, 656, 846, 892, 1060, 1063, 1390 |
| PleI | GAGTC | 1 cut(s) | 820 |
| PpsI | GAGTC | 1 cut(s) | 820 |
| PsiI | TTATAA | 1 cut(s) | 675 |
| Psp6I | CCWGG | 2 cut(s) | 963, 1261 |
| PspGI | CCWGG | 2 cut(s) | 963, 1261 |
| PspN4I | GGNNCC | 3 cut(s) | 515, 1102, 1477 |
| PspPI | GGNCC | 2 cut(s) | 396, 1245 |
| PsuI | RGATCY | 1 cut(s) | 513 |
| RsaI | GTAC | 2 cut(s) | 543, 1467 |
| RsaNI | GTAC | 2 cut(s) | 542, 1466 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1320, 1454 |
| SaqAI | TTAA | 1 cut(s) | 234 |
| SatI | GCNGC | 9 cut(s) | 5, 573, 594, 655, 845, 891, 1059, 1062, 1389 |
| Sau3AI | GATC | 3 cut(s) | 376, 513, 1258 |
| Sau96I | GGNCC | 2 cut(s) | 396, 1245 |
| SchI | GAGTC | 1 cut(s) | 821 |
| ScrFI | CCNGG | 2 cut(s) | 965, 1263 |
| SduI | GDGCHC | 1 cut(s) | 76 |
| SfaNI | GCATC | 1 cut(s) | 601 |
| SfuI | TTCGAA | 1 cut(s) | 262 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1320, 1454 |
| SmlI | CTYRAG | 5 cut(s) | 729, 801, 821, 871, 894 |
| SmoI | CTYRAG | 5 cut(s) | 729, 801, 821, 871, 894 |
| Sse9I | AATT | 8 cut(s) | 265, 307, 626, 721, 1012, 1034, 1129, 1180 |
| SseBI | AGGCCT | 1 cut(s) | 183 |
| SsiI | CCGC | 3 cut(s) | 575, 654, 1243 |
| SspMI | CTAG | 2 cut(s) | 791, 936 |
| StuI | AGGCCT | 1 cut(s) | 183 |
| StyD4I | CCNGG | 2 cut(s) | 963, 1261 |
| StyI | CCWWGG | 3 cut(s) | 744, 757, 1206 |
| TaaI | ACNGT | 4 cut(s) | 62, 1271, 1322, 1435 |
| TaiI | ACGT | 3 cut(s) | 287, 547, 889 |
| TaqI | TCGA | 4 cut(s) | 262, 338, 645, 1083 |
| TasI | AATT | 8 cut(s) | 265, 307, 626, 721, 1012, 1034, 1129, 1180 |
| TauI | GCSGC | 1 cut(s) | 657 |
| TfiI | GAWTC | 5 cut(s) | 167, 193, 422, 796, 1153 |
| Tru1I | TTAA | 1 cut(s) | 234 |
| Tru9I | TTAA | 1 cut(s) | 234 |
| TscAI | CASTG | 3 cut(s) | 393, 1276, 1327 |
| TseFI | GTSAC | 1 cut(s) | 245 |
| TseI | GCWGC | 8 cut(s) | 4, 572, 593, 844, 890, 1058, 1061, 1388 |
| Tsp45I | GTSAC | 1 cut(s) | 245 |
| TspDTI | ATGAA | 6 cut(s) | 96, 139, 639, 705, 1007, 1011 |
| TspGWI | ACGGA | 1 cut(s) | 318 |
| TspRI | CASTG | 3 cut(s) | 393, 1276, 1327 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 32 |
| XapI | RAATTY | 2 cut(s) | 265, 1034 |
| XceI | RCATGY | 1 cut(s) | 1081 |
| XmnI | GAANNNNTTC | 2 cut(s) | 258, 286 |
| XspI | CTAG | 2 cut(s) | 791, 936 |