Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g06190 |
| malus_domestica | MD13G1234500.v1.1 MD16G1239300.v1.1 |
| prunus_persica | Prupe.1G065300_v2.0.a1 Prupe.1G065300_v2.0.a1 |
| pyrus_communis | pycom13g20640 pycom16g20020 |
| rosa_chinensis | RchiOBHm_Chr4g0397771 |
| rosa_laevigata | RLG00000009414 |
| rosa_multiflora | Rmu_sc0004527.1_g000004 |
| rosa_roxburghii | Rroxscaffold_5G00342570 |
| rosa_rugosa | Rorug04G0004100 Rorug04G0004100 Rorug04G0004200 |
| rosa_samantha | Rh4AG080600 Rh4BG078200 Rh4DG073600 |
| rosa_wichuraiana | Rw4G006600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 523 |
| Acc36I | ACCTGC | 3 cut(s) | 523, 1024, 1725 |
| AccB1I | GGYRCC | 4 cut(s) | 20, 457, 2086, 2215 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2498 |
| AccBSI | CCGCTC | 1 cut(s) | 1382 |
| AccI | GTMKAC | 1 cut(s) | 156 |
| AccII | CGCG | 1 cut(s) | 14 |
| AclWI | GGATC | 6 cut(s) | 1244, 1257, 1392, 1525, 2828, 3307 |
| AcoI | YGGCCR | 3 cut(s) | 36, 2806, 2844 |
| AcsI | RAATTY | 5 cut(s) | 851, 1303, 1579, 2353, 2577 |
| AcuI | CTGAAG | 9 cut(s) | 308, 723, 960, 1123, 1649, 1898, 2529, 2637, 2877 |
| AcvI | CACGTG | 1 cut(s) | 151 |
| AcyI | GRCGYC | 1 cut(s) | 21 |
| AfaI | GTAC | 3 cut(s) | 875, 962, 970 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 17, 140, 295, 1226, 1999, 2498, 3280 |
| AflII | CTTAAG | 1 cut(s) | 2525 |
| AjiI | CACGTC | 1 cut(s) | 707 |
| AjnI | CCWGG | 8 cut(s) | 533, 1162, 1254, 1264, 1351, 1571, 1998, 2042 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2142, 2174 |
| AleI | CACNNNNGTG | 1 cut(s) | 3089 |
| Alw26I | GTCTC | 4 cut(s) | 263, 1450, 1857, 3348 |
| AlwI | GGATC | 6 cut(s) | 1244, 1257, 1392, 1525, 2828, 3307 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 1627, 1717, 1750, 2128 |
| AoxI | GGCC | 8 cut(s) | 36, 116, 1412, 2045, 2659, 2806, 2844, 3040 |
| ApoI | RAATTY | 5 cut(s) | 851, 1303, 1579, 2353, 2577 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1813, 1845 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2516 |
| AspLEI | GCGC | 3 cut(s) | 23, 113, 1026 |
| AspS9I | GGNCC | 8 cut(s) | 44, 116, 144, 286, 1412, 2002, 3041, 3202 |
| AsuC2I | CCSGG | 3 cut(s) | 92, 115, 2230 |
| AsuHPI | GGTGA | 7 cut(s) | 136, 265, 1241, 1565, 2237, 2349, 3161 |
| AsuNHI | GCTAGC | 1 cut(s) | 2558 |
| AvaII | GGWCC | 5 cut(s) | 44, 144, 286, 2002, 3202 |
| BaeGI | GKGCMC | 1 cut(s) | 2855 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 952, 985 |
| BalI | TGGCCA | 2 cut(s) | 2808, 2846 |
| BamHI | GGATCC | 1 cut(s) | 1249 |
| BanI | GGYRCC | 4 cut(s) | 20, 457, 2086, 2215 |
| BanII | GRGCYC | 2 cut(s) | 2413, 3052 |
| BbrPI | CACGTG | 1 cut(s) | 151 |
| BbvCI | CCTCAGC | 2 cut(s) | 1464, 2178 |
| BceAI | ACGGC | 2 cut(s) | 34, 3356 |
| BcgI | CGANNNNNNTGC | 6 cut(s) | 167, 201, 290, 324, 2076, 2110 |
| BciT130I | CCWGG | 8 cut(s) | 535, 1164, 1256, 1266, 1353, 1573, 2000, 2044 |
| BciVI | GTATCC | 2 cut(s) | 1670, 2811 |
| BclI | TGATCA | 2 cut(s) | 1483, 1864 |
| BcnI | CCSGG | 3 cut(s) | 92, 115, 2230 |
| BcoDI | GTCTC | 4 cut(s) | 263, 1450, 1857, 3348 |
| BfaI | CTAG | 6 cut(s) | 776, 834, 1680, 2472, 2559, 3260 |
| BfmI | CTRYAG | 5 cut(s) | 783, 1718, 2274, 3108, 3120 |
| BfoI | RGCGCY | 1 cut(s) | 24 |
| BfrI | CTTAAG | 1 cut(s) | 2525 |
| BfuAI | ACCTGC | 3 cut(s) | 523, 1024, 1725 |
| BfuI | GTATCC | 2 cut(s) | 1670, 2811 |
| BglII | AGATCT | 3 cut(s) | 367, 3116, 3163 |
| BlpI | GCTNAGC | 1 cut(s) | 2934 |
| BmcAI | AGTACT | 1 cut(s) | 875 |
| Bme18I | GGWCC | 5 cut(s) | 44, 144, 286, 2002, 3202 |
| BmgBI | CACGTC | 1 cut(s) | 707 |
| BmgT120I | GGNCC | 8 cut(s) | 44, 116, 144, 286, 1412, 2002, 3041, 3202 |
| BmrI | ACTGGG | 1 cut(s) | 2959 |
| BmtI | GCTAGC | 1 cut(s) | 2562 |
| BmuI | ACTGGG | 1 cut(s) | 2959 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1643 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 1169, 1201, 1447, 1479 |
| BpmI | CTGGAG | 5 cut(s) | 1398, 1588, 1982, 2026, 3036 |
| Bpu10I | CCTNAGC | 2 cut(s) | 1464, 2178 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 2934 |
| BpuEI | CTTGAG | 4 cut(s) | 150, 362, 504, 2485 |
| BpuMI | CCSGG | 3 cut(s) | 92, 115, 2230 |
| BsaAI | YACGTR | 1 cut(s) | 151 |
| BsaHI | GRCGYC | 1 cut(s) | 21 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 60, 90, 243, 273 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 17, 140, 295, 1226, 1999, 2498, 3280 |
| Bse118I | RCCGGY | 1 cut(s) | 136 |
| Bse1I | ACTGG | 5 cut(s) | 840, 1282, 2742, 2965, 3043 |
| Bse3DI | GCAATG | 2 cut(s) | 2293, 2553 |
| BseBI | CCWGG | 8 cut(s) | 535, 1164, 1256, 1266, 1353, 1573, 2000, 2044 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 17, 140, 295, 1226, 1999, 2498, 3280 |
| BseMI | GCAATG | 2 cut(s) | 2293, 2553 |
| BseNI | ACTGG | 5 cut(s) | 840, 1282, 2742, 2965, 3043 |
| BseRI | GAGGAG | 2 cut(s) | 480, 3296 |
| BseSI | GKGCMC | 1 cut(s) | 2855 |
| BseYI | CCCAGC | 3 cut(s) | 140, 1058, 1620 |
| BsgI | GTGCAG | 3 cut(s) | 489, 2325, 2628 |
| Bsh1236I | CGCG | 1 cut(s) | 14 |
| BshFI | GGCC | 8 cut(s) | 38, 118, 1414, 2047, 2661, 2808, 2846, 3042 |
| BshNI | GGYRCC | 4 cut(s) | 20, 457, 2086, 2215 |
| BsiSI | CCGG | 5 cut(s) | 24, 92, 114, 137, 2229 |
| BslFI | GGGAC | 6 cut(s) | 157, 1110, 2014, 2253, 3204, 3304 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 17, 140, 295, 1226, 1999, 2498, 3280 |
| BsmAI | GTCTC | 4 cut(s) | 263, 1450, 1857, 3348 |
| BsmFI | GGGAC | 6 cut(s) | 157, 1110, 2014, 2253, 3204, 3304 |
| BsmI | GAATGC | 4 cut(s) | 1173, 1342, 2990, 3418 |
| BsnI | GGCC | 8 cut(s) | 38, 118, 1414, 2047, 2661, 2808, 2846, 3042 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2413, 2855, 3052 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 2934 |
| Bsp19I | CCATGG | 1 cut(s) | 3044 |
| BspANI | GGCC | 8 cut(s) | 38, 118, 1414, 2047, 2661, 2808, 2846, 3042 |
| BspFNI | CGCG | 1 cut(s) | 14 |
| BspHI | TCATGA | 1 cut(s) | 3241 |
| BspMAI | CTGCAG | 2 cut(s) | 787, 1722 |
| BspMI | ACCTGC | 3 cut(s) | 523, 1024, 1725 |
| BspOI | GCTAGC | 1 cut(s) | 2562 |
| BspPI | GGATC | 6 cut(s) | 1244, 1257, 1392, 1525, 2828, 3307 |
| BspT107I | GGYRCC | 4 cut(s) | 20, 457, 2086, 2215 |
| BspTI | CTTAAG | 1 cut(s) | 2525 |
| BsrBI | CCGCTC | 1 cut(s) | 1382 |
| BsrDI | GCAATG | 2 cut(s) | 2293, 2553 |
| BsrFI | RCCGGY | 1 cut(s) | 136 |
| BsrI | ACTGG | 5 cut(s) | 840, 1282, 2742, 2965, 3043 |
| BssAI | RCCGGY | 1 cut(s) | 136 |
| BssNI | GRCGYC | 1 cut(s) | 21 |
| BssT1I | CCWWGG | 5 cut(s) | 1220, 2847, 3044, 3087, 3275 |
| Bst2UI | CCWGG | 8 cut(s) | 535, 1164, 1256, 1266, 1353, 1573, 2000, 2044 |
| Bst6I | CTCTTC | 4 cut(s) | 629, 936, 2647, 2896 |
| BstACI | GRCGYC | 1 cut(s) | 21 |
| BstAFI | CTTAAG | 1 cut(s) | 2525 |
| BstAPI | GCANNNNNTGC | 4 cut(s) | 791, 1750, 2074, 2930 |
| BstBAI | YACGTR | 1 cut(s) | 151 |
| BstDSI | CCRYGG | 1 cut(s) | 3044 |
| BstFNI | CGCG | 1 cut(s) | 14 |
| BstH2I | RGCGCY | 1 cut(s) | 24 |
| BstHHI | GCGC | 3 cut(s) | 23, 113, 1026 |
| BstMAI | GTCTC | 4 cut(s) | 263, 1450, 1857, 3348 |
| BstNI | CCWGG | 8 cut(s) | 535, 1164, 1256, 1266, 1353, 1573, 2000, 2044 |
| BstNSI | RCATGY | 4 cut(s) | 284, 1297, 1342, 1408 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1643 |
| BstSFI | CTRYAG | 5 cut(s) | 783, 1718, 2274, 3108, 3120 |
| BstSLI | GKGCMC | 1 cut(s) | 2855 |
| BstUI | CGCG | 1 cut(s) | 14 |
| BstX2I | RGATCY | 6 cut(s) | 367, 1249, 1384, 3116, 3163, 3312 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2972 |
| BstYI | RGATCY | 6 cut(s) | 367, 1249, 1384, 3116, 3163, 3312 |
| BsuI | GTATCC | 2 cut(s) | 1670, 2811 |
| BsuRI | GGCC | 8 cut(s) | 38, 118, 1414, 2047, 2661, 2808, 2846, 3042 |
| BtgI | CCRYGG | 1 cut(s) | 3044 |
| BtrI | CACGTC | 1 cut(s) | 707 |
| BtsIMutI | CAGTG | 5 cut(s) | 825, 1289, 2553, 2611, 3036 |
| BveI | ACCTGC | 3 cut(s) | 523, 1024, 1725 |
| CaiI | CAGNNNCTG | 4 cut(s) | 1627, 1717, 1750, 2128 |
| CciI | TCATGA | 1 cut(s) | 3241 |
| CfoI | GCGC | 3 cut(s) | 23, 113, 1026 |
| Cfr10I | RCCGGY | 1 cut(s) | 136 |
| Cfr13I | GGNCC | 8 cut(s) | 44, 116, 144, 286, 1412, 2002, 3041, 3202 |
| CseI | GACGC | 1 cut(s) | 1139 |
| CsiI | ACCWGGT | 1 cut(s) | 1264 |
| Csp6I | GTAC | 3 cut(s) | 874, 961, 969 |
| CviQI | GTAC | 3 cut(s) | 874, 961, 969 |
| DinI | GGCGCC | 1 cut(s) | 22 |
| EaeI | YGGCCR | 3 cut(s) | 36, 2806, 2844 |
| Eam1104I | CTCTTC | 4 cut(s) | 629, 936, 2647, 2896 |
| EarI | CTCTTC | 4 cut(s) | 629, 936, 2647, 2896 |
| EciI | GGCGGA | 1 cut(s) | 554 |
| Eco130I | CCWWGG | 5 cut(s) | 1220, 2847, 3044, 3087, 3275 |
| Eco147I | AGGCCT | 2 cut(s) | 2047, 2661 |
| Eco24I | GRGCYC | 2 cut(s) | 2413, 3052 |
| Eco47I | GGWCC | 5 cut(s) | 44, 144, 286, 2002, 3202 |
| Eco57I | CTGAAG | 9 cut(s) | 308, 723, 960, 1123, 1649, 1898, 2529, 2637, 2877 |
| Eco72I | CACGTG | 1 cut(s) | 151 |
| EcoO109I | RGGNCCY | 2 cut(s) | 144, 1412 |
| EcoRI | GAATTC | 1 cut(s) | 2577 |
| EcoRII | CCWGG | 8 cut(s) | 533, 1162, 1254, 1264, 1351, 1571, 1998, 2042 |
| EcoT14I | CCWWGG | 5 cut(s) | 1220, 2847, 3044, 3087, 3275 |
| EcoT22I | ATGCAT | 2 cut(s) | 355, 1344 |
| EcoT38I | GRGCYC | 2 cut(s) | 2413, 3052 |
| EgeI | GGCGCC | 1 cut(s) | 22 |
| EheI | GGCGCC | 1 cut(s) | 22 |
| ErhI | CCWWGG | 5 cut(s) | 1220, 2847, 3044, 3087, 3275 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2565, 2597 |
| FaqI | GGGAC | 6 cut(s) | 157, 1110, 2014, 2253, 3204, 3304 |
| FauI | CCCGC | 3 cut(s) | 19, 1306, 1819 |
| FauNDI | CATATG | 2 cut(s) | 2235, 2788 |
| FbaI | TGATCA | 2 cut(s) | 1483, 1864 |
| FblI | GTMKAC | 1 cut(s) | 156 |
| FriOI | GRGCYC | 2 cut(s) | 2413, 3052 |
| FspBI | CTAG | 6 cut(s) | 776, 834, 1680, 2472, 2559, 3260 |
| GlaI | GCGC | 3 cut(s) | 22, 112, 1025 |
| GsaI | CCCAGC | 3 cut(s) | 144, 1062, 1624 |
| GsuI | CTGGAG | 5 cut(s) | 1398, 1588, 1982, 2026, 3036 |
| HaeII | RGCGCY | 1 cut(s) | 24 |
| HaeIII | GGCC | 8 cut(s) | 38, 118, 1414, 2047, 2661, 2808, 2846, 3042 |
| HapII | CCGG | 5 cut(s) | 24, 92, 114, 137, 2229 |
| HgaI | GACGC | 1 cut(s) | 1139 |
| HhaI | GCGC | 3 cut(s) | 23, 113, 1026 |
| Hin1I | GRCGYC | 1 cut(s) | 21 |
| Hin6I | GCGC | 3 cut(s) | 21, 111, 1024 |
| HinP1I | GCGC | 3 cut(s) | 21, 111, 1024 |
| HincII | GTYRAC | 1 cut(s) | 1053 |
| HindII | GTYRAC | 1 cut(s) | 1053 |
| HindIII | AAGCTT | 3 cut(s) | 1928, 2189, 3387 |
| HpaII | CCGG | 5 cut(s) | 24, 92, 114, 137, 2229 |
| HphI | GGTGA | 7 cut(s) | 136, 265, 1241, 1565, 2237, 2349, 3161 |
| Hpy166II | GTNNAC | 5 cut(s) | 127, 157, 1053, 2551, 3292 |
| Hpy8I | GTNNAC | 5 cut(s) | 127, 157, 1053, 2551, 3292 |
| Hpy99I | CGWCG | 2 cut(s) | 468, 2432 |
| HpyAV | CCTTC | 8 cut(s) | 56, 272, 823, 951, 1240, 1673, 2553, 2744 |
| HpyCH4IV | ACGT | 3 cut(s) | 150, 706, 3100 |
| HpySE526I | ACGT | 3 cut(s) | 150, 706, 3100 |
| Hsp92I | GRCGYC | 1 cut(s) | 21 |
| HspAI | GCGC | 3 cut(s) | 21, 111, 1024 |
| KasI | GGCGCC | 1 cut(s) | 20 |
| KflI | GGGWCCC | 1 cut(s) | 144 |
| KroI | GCCGGC | 1 cut(s) | 136 |
| KroNI | GCCGGC | 1 cut(s) | 138 |
| Ksp22I | TGATCA | 2 cut(s) | 1483, 1864 |
| LmnI | GCTCC | 8 cut(s) | 26, 94, 615, 1114, 1379, 2309, 3055, 3104 |
| MabI | ACCWGGT | 1 cut(s) | 1264 |
| MaeI | CTAG | 6 cut(s) | 776, 834, 1680, 2472, 2559, 3260 |
| MaeII | ACGT | 3 cut(s) | 150, 706, 3100 |
| MaeIII | GTNAC | 7 cut(s) | 170, 271, 428, 1102, 1316, 1920, 2501 |
| MbiI | CCGCTC | 1 cut(s) | 1382 |
| MfeI | CAATTG | 2 cut(s) | 2810, 3000 |
| MflI | RGATCY | 6 cut(s) | 367, 1249, 1384, 3116, 3163, 3312 |
| MhlI | GDGCHC | 3 cut(s) | 2413, 2855, 3052 |
| MlsI | TGGCCA | 2 cut(s) | 2808, 2846 |
| MluNI | TGGCCA | 2 cut(s) | 2808, 2846 |
| Mly113I | GGCGCC | 1 cut(s) | 21 |
| MlyI | GAGTC | 5 cut(s) | 953, 1058, 2047, 2476, 2999 |
| MmeI | TCCRAC | 3 cut(s) | 1558, 2017, 3244 |
| Mox20I | TGGCCA | 2 cut(s) | 2808, 2846 |
| Mph1103I | ATGCAT | 2 cut(s) | 355, 1344 |
| MroNI | GCCGGC | 1 cut(s) | 136 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2516 |
| MscI | TGGCCA | 2 cut(s) | 2808, 2846 |
| MseI | TTAA | 6 cut(s) | 1206, 1587, 2384, 2526, 2538, 3156 |
| MslI | CAYNNNNRTG | 3 cut(s) | 2063, 3089, 3246 |
| Msp20I | TGGCCA | 2 cut(s) | 2808, 2846 |
| MspA1I | CMGCKG | 6 cut(s) | 121, 1750, 1918, 2128, 2279, 2612 |
| MspCI | CTTAAG | 1 cut(s) | 2525 |
| MspI | CCGG | 5 cut(s) | 24, 92, 114, 137, 2229 |
| MunI | CAATTG | 2 cut(s) | 2810, 3000 |
| Mva1269I | GAATGC | 4 cut(s) | 1173, 1342, 2990, 3418 |
| MvaI | CCWGG | 8 cut(s) | 535, 1164, 1256, 1266, 1353, 1573, 2000, 2044 |
| MvnI | CGCG | 1 cut(s) | 14 |
| NaeI | GCCGGC | 1 cut(s) | 138 |
| NarI | GGCGCC | 1 cut(s) | 21 |
| NciI | CCSGG | 3 cut(s) | 92, 115, 2230 |
| NcoI | CCATGG | 1 cut(s) | 3044 |
| NdeI | CATATG | 2 cut(s) | 2235, 2788 |
| NgoMIV | GCCGGC | 1 cut(s) | 136 |
| NheI | GCTAGC | 1 cut(s) | 2558 |
| NmeAIII | GCCGAG | 2 cut(s) | 1135, 1372 |
| NmuCI | GTSAC | 3 cut(s) | 170, 271, 428 |
| NsiI | ATGCAT | 2 cut(s) | 355, 1344 |
| NspI | RCATGY | 4 cut(s) | 284, 1297, 1342, 1408 |
| OliI | CACNNNNGTG | 1 cut(s) | 3089 |
| PaeI | GCATGC | 1 cut(s) | 284 |
| PagI | TCATGA | 1 cut(s) | 3241 |
| PaqCI | CACCTGC | 1 cut(s) | 523 |
| PceI | AGGCCT | 2 cut(s) | 2047, 2661 |
| PctI | GAATGC | 4 cut(s) | 1173, 1342, 2990, 3418 |
| PdiI | GCCGGC | 1 cut(s) | 138 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2516 |
| PfeI | GAWTC | 6 cut(s) | 235, 653, 772, 995, 1181, 2827 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2498 |
| PfoI | TCCNGGA | 1 cut(s) | 1998 |
| PleI | GAGTC | 5 cut(s) | 952, 1057, 2047, 2475, 2999 |
| PluTI | GGCGCC | 1 cut(s) | 24 |
| PmaCI | CACGTG | 1 cut(s) | 151 |
| PmlI | CACGTG | 1 cut(s) | 151 |
| PpsI | GAGTC | 5 cut(s) | 952, 1057, 2047, 2475, 2999 |
| Ppu21I | YACGTR | 1 cut(s) | 151 |
| PpuMI | RGGWCCY | 1 cut(s) | 144 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1643 |
| Psp5II | RGGWCCY | 1 cut(s) | 144 |
| Psp6I | CCWGG | 8 cut(s) | 533, 1162, 1254, 1264, 1351, 1571, 1998, 2042 |
| PspCI | CACGTG | 1 cut(s) | 151 |
| PspFI | CCCAGC | 3 cut(s) | 140, 1058, 1620 |
| PspGI | CCWGG | 8 cut(s) | 533, 1162, 1254, 1264, 1351, 1571, 1998, 2042 |
| PspPI | GGNCC | 8 cut(s) | 44, 116, 144, 286, 1412, 2002, 3041, 3202 |
| PspPPI | RGGWCCY | 1 cut(s) | 144 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3282, 3314 |
| PstI | CTGCAG | 2 cut(s) | 787, 1722 |
| PstNI | CAGNNNCTG | 4 cut(s) | 1627, 1717, 1750, 2128 |
| PsuI | RGATCY | 6 cut(s) | 367, 1249, 1384, 3116, 3163, 3312 |
| PvuII | CAGCTG | 5 cut(s) | 1750, 1918, 2128, 2279, 2612 |
| RsaI | GTAC | 3 cut(s) | 875, 962, 970 |
| RsaNI | GTAC | 3 cut(s) | 874, 961, 969 |
| RseI | CAYNNNNRTG | 3 cut(s) | 2063, 3089, 3246 |
| SaqAI | TTAA | 6 cut(s) | 1206, 1587, 2384, 2526, 2538, 3156 |
| Sau96I | GGNCC | 8 cut(s) | 44, 116, 144, 286, 1412, 2002, 3041, 3202 |
| ScaI | AGTACT | 1 cut(s) | 875 |
| SchI | GAGTC | 5 cut(s) | 953, 1058, 2047, 2476, 2999 |
| SduI | GDGCHC | 3 cut(s) | 2413, 2855, 3052 |
| SexAI | ACCWGGT | 1 cut(s) | 1264 |
| SfcI | CTRYAG | 5 cut(s) | 783, 1718, 2274, 3108, 3120 |
| SfoI | GGCGCC | 1 cut(s) | 22 |
| SinI | GGWCC | 5 cut(s) | 44, 144, 286, 2002, 3202 |
| SmiMI | CAYNNNNRTG | 3 cut(s) | 2063, 3089, 3246 |
| SmlI | CTYRAG | 5 cut(s) | 165, 377, 519, 2464, 2525 |
| SmoI | CTYRAG | 5 cut(s) | 165, 377, 519, 2464, 2525 |
| SphI | GCATGC | 1 cut(s) | 284 |
| SseBI | AGGCCT | 2 cut(s) | 2047, 2661 |
| SspDI | GGCGCC | 1 cut(s) | 20 |
| SspMI | CTAG | 6 cut(s) | 776, 834, 1680, 2472, 2559, 3260 |
| StuI | AGGCCT | 2 cut(s) | 2047, 2661 |
| StyI | CCWWGG | 5 cut(s) | 1220, 2847, 3044, 3087, 3275 |
| TaiI | ACGT | 3 cut(s) | 153, 709, 3103 |
| TaqI | TCGA | 3 cut(s) | 495, 2416, 2495 |
| TaqII | GACCGA | 1 cut(s) | 3219 |
| TatI | WGTACW | 1 cut(s) | 873 |
| TauI | GCSGC | 8 cut(s) | 10, 38, 121, 136, 191, 782, 800, 3027 |
| TfiI | GAWTC | 6 cut(s) | 235, 653, 772, 995, 1181, 2827 |
| Tru1I | TTAA | 6 cut(s) | 1206, 1587, 2384, 2526, 2538, 3156 |
| Tru9I | TTAA | 6 cut(s) | 1206, 1587, 2384, 2526, 2538, 3156 |
| TscAI | CASTG | 5 cut(s) | 825, 1289, 2553, 2611, 3043 |
| TseFI | GTSAC | 3 cut(s) | 170, 271, 428 |
| Tsp45I | GTSAC | 3 cut(s) | 170, 271, 428 |
| TspGWI | ACGGA | 1 cut(s) | 311 |
| TspRI | CASTG | 5 cut(s) | 825, 1289, 2553, 2611, 3043 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2498 |
| Vha464I | CTTAAG | 1 cut(s) | 2525 |
| VpaK11BI | GGWCC | 5 cut(s) | 44, 144, 286, 2002, 3202 |
| XapI | RAATTY | 5 cut(s) | 851, 1303, 1579, 2353, 2577 |
| XceI | RCATGY | 4 cut(s) | 284, 1297, 1342, 1408 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 575, 1262, 2854 |
| XmiI | GTMKAC | 1 cut(s) | 156 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2516 |
| XspI | CTAG | 6 cut(s) | 776, 834, 1680, 2472, 2559, 3260 |
| ZrmI | AGTACT | 1 cut(s) | 875 |
| Zsp2I | ATGCAT | 2 cut(s) | 355, 1344 |