ZINC FINGER protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57660 |
| fragaria_vesca | FvH4_4g08980 FvH4_4g08980 |
| malus_domestica | MD00G1017500.v1.1 MD07G1300100.v1.1 MD13G1263800.v1.1 MD16G1265000.v1.1 |
| prunus_persica | Prupe.1G093900_v2.0.a1 |
| pyrus_communis | pycom13g23870 pycom16g23480 |
| rosa_chinensis | RchiOBHm_Chr4g0403841 |
| rosa_laevigata | RLG00000008947 |
| rosa_multiflora | Rmu_sc0005134.1_g000019 |
| rosa_roxburghii | Rroxscaffold_5G00348440 |
| rosa_rugosa | Rorug03G0265600 Rorug04G0045800 Rorug05G0458600 |
| rosa_samantha | Rh4AG121100 Rh4BG114300 Rh4CG129600 Rh4DG114200 |
| rosa_wichuraiana | Rw4G009870 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 134 |
| AccB1I | GGYRCC | 1 cut(s) | 407 |
| AccBSI | CCGCTC | 1 cut(s) | 1103 |
| AccI | GTMKAC | 2 cut(s) | 378, 452 |
| AccIII | TCCGGA | 1 cut(s) | 508 |
| AclI | AACGTT | 1 cut(s) | 858 |
| AclWI | GGATC | 4 cut(s) | 133, 577, 860, 873 |
| AcoI | YGGCCR | 4 cut(s) | 159, 333, 838, 906 |
| AcsI | RAATTY | 2 cut(s) | 475, 704 |
| AcuI | CTGAAG | 1 cut(s) | 718 |
| AcvI | CACGTG | 2 cut(s) | 222, 255 |
| AcyI | GRCGYC | 6 cut(s) | 132, 234, 261, 408, 449, 1134 |
| AfaI | GTAC | 4 cut(s) | 610, 953, 998, 1016 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 21, 304, 310, 547, 1107 |
| AgsI | TTSAA | 3 cut(s) | 475, 481, 632 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 448 |
| AjnI | CCWGG | 1 cut(s) | 455 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 461, 493 |
| AluBI | AGCT | 5 cut(s) | 157, 490, 721, 738, 916 |
| AluI | AGCT | 5 cut(s) | 157, 490, 721, 738, 916 |
| Alw26I | GTCTC | 4 cut(s) | 423, 679, 886, 1118 |
| AlwI | GGATC | 4 cut(s) | 133, 577, 860, 873 |
| Ama87I | CYCGRG | 2 cut(s) | 1030, 1121 |
| Aor13HI | TCCGGA | 1 cut(s) | 508 |
| AoxI | GGCC | 9 cut(s) | 40, 159, 228, 333, 838, 906, 1042, 1077, 1110 |
| ApeKI | GCWGC | 1 cut(s) | 146 |
| ApoI | RAATTY | 2 cut(s) | 475, 704 |
| AspLEI | GCGC | 4 cut(s) | 168, 177, 410, 875 |
| AspS9I | GGNCC | 2 cut(s) | 307, 1110 |
| AsuC2I | CCSGG | 2 cut(s) | 305, 311 |
| AvaI | CYCGRG | 2 cut(s) | 1030, 1121 |
| AvaII | GGWCC | 1 cut(s) | 307 |
| BalI | TGGCCA | 2 cut(s) | 161, 908 |
| BamHI | GGATCC | 1 cut(s) | 865 |
| BanI | GGYRCC | 1 cut(s) | 407 |
| BauI | CACGAG | 2 cut(s) | 64, 170 |
| BbrPI | CACGTG | 2 cut(s) | 222, 255 |
| BbsI | GAAGAC | 1 cut(s) | 992 |
| BbvI | GCAGC | 1 cut(s) | 158 |
| BccI | CCATC | 2 cut(s) | 490, 998 |
| BceAI | ACGGC | 7 cut(s) | 40, 304, 395, 421, 1064, 1111, 1147 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 864, 898 |
| BciT130I | CCWGG | 1 cut(s) | 457 |
| BciVI | GTATCC | 1 cut(s) | 840 |
| BcnI | CCSGG | 2 cut(s) | 305, 311 |
| BcoDI | GTCTC | 4 cut(s) | 423, 679, 886, 1118 |
| BfaI | CTAG | 2 cut(s) | 44, 939 |
| BfoI | RGCGCY | 1 cut(s) | 411 |
| BfuAI | ACCTGC | 1 cut(s) | 134 |
| BfuI | GTATCC | 1 cut(s) | 840 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 107 |
| BisI | GCNGC | 9 cut(s) | 40, 81, 147, 237, 240, 295, 360, 363, 447 |
| BlpI | GCTNAGC | 2 cut(s) | 755, 917 |
| BlsI | GCNGC | 9 cut(s) | 41, 82, 148, 238, 241, 296, 361, 364, 448 |
| Bme1390I | CCNGG | 3 cut(s) | 305, 311, 457 |
| Bme18I | GGWCC | 1 cut(s) | 307 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 448 |
| BmeT110I | CYCGRG | 2 cut(s) | 1030, 1121 |
| BmgT120I | GGNCC | 2 cut(s) | 307, 1110 |
| BmiI | GGNNCC | 7 cut(s) | 207, 308, 309, 409, 867, 1099, 1111 |
| BmrFI | CCNGG | 3 cut(s) | 305, 311, 457 |
| BpiI | GAAGAC | 1 cut(s) | 992 |
| BpmI | CTGGAG | 2 cut(s) | 476, 581 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1104 |
| Bpu1102I | GCTNAGC | 2 cut(s) | 755, 917 |
| BpuMI | CCSGG | 2 cut(s) | 305, 311 |
| BsaAI | YACGTR | 2 cut(s) | 222, 255 |
| BsaHI | GRCGYC | 6 cut(s) | 132, 234, 261, 408, 449, 1134 |
| BsaI | GGTCTC | 1 cut(s) | 886 |
| BsaJI | CCNNGG | 2 cut(s) | 81, 780 |
| BsaWI | WCCGGW | 2 cut(s) | 508, 625 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 272, 302, 794, 824 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 21, 304, 310, 547, 1107 |
| Bse118I | RCCGGY | 2 cut(s) | 14, 1044 |
| BseAI | TCCGGA | 1 cut(s) | 508 |
| BseBI | CCWGG | 1 cut(s) | 457 |
| BseDI | CCNNGG | 2 cut(s) | 81, 780 |
| BseGI | GGATG | 1 cut(s) | 189 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 21, 304, 310, 547, 1107 |
| BseMII | CTCAG | 4 cut(s) | 761, 769, 931, 1118 |
| BseRI | GAGGAG | 2 cut(s) | 358, 361 |
| BseX3I | CGGCCG | 2 cut(s) | 333, 838 |
| BseXI | GCAGC | 1 cut(s) | 158 |
| BseYI | CCCAGC | 1 cut(s) | 869 |
| Bsh1285I | CGRYCG | 3 cut(s) | 315, 336, 841 |
| BshFI | GGCC | 9 cut(s) | 42, 161, 230, 335, 840, 908, 1044, 1079, 1112 |
| BshNI | GGYRCC | 1 cut(s) | 407 |
| BsiEI | CGRYCG | 3 cut(s) | 315, 336, 841 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1030, 1121 |
| BsiSI | CCGG | 6 cut(s) | 15, 304, 311, 509, 626, 1045 |
| BsiWI | CGTACG | 1 cut(s) | 1014 |
| BslFI | GGGAC | 1 cut(s) | 293 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 21, 304, 310, 547, 1107 |
| BsmAI | GTCTC | 4 cut(s) | 423, 679, 886, 1118 |
| BsmBI | CGTCTC | 2 cut(s) | 423, 679 |
| BsmFI | GGGAC | 1 cut(s) | 293 |
| BsnI | GGCC | 9 cut(s) | 42, 161, 230, 335, 840, 908, 1044, 1079, 1112 |
| Bso31I | GGTCTC | 1 cut(s) | 886 |
| BsoBI | CYCGRG | 2 cut(s) | 1030, 1121 |
| Bsp13I | TCCGGA | 1 cut(s) | 508 |
| Bsp143I | GATC | 3 cut(s) | 138, 582, 865 |
| Bsp1720I | GCTNAGC | 2 cut(s) | 755, 917 |
| Bsp68I | TCGCGA | 2 cut(s) | 50, 1052 |
| BspANI | GGCC | 9 cut(s) | 42, 161, 230, 335, 840, 908, 1044, 1079, 1112 |
| BspCNI | CTCAG | 4 cut(s) | 760, 768, 930, 1117 |
| BspEI | TCCGGA | 1 cut(s) | 508 |
| BspLI | GGNNCC | 7 cut(s) | 207, 308, 309, 409, 867, 1099, 1111 |
| BspMI | ACCTGC | 1 cut(s) | 134 |
| BspPI | GGATC | 4 cut(s) | 133, 577, 860, 873 |
| BspT107I | GGYRCC | 1 cut(s) | 407 |
| BspTNI | GGTCTC | 1 cut(s) | 886 |
| BsrBI | CCGCTC | 1 cut(s) | 1103 |
| BsrFI | RCCGGY | 2 cut(s) | 14, 1044 |
| BssAI | RCCGGY | 2 cut(s) | 14, 1044 |
| BssECI | CCNNGG | 2 cut(s) | 81, 780 |
| BssMI | GATC | 3 cut(s) | 138, 582, 865 |
| BssNI | GRCGYC | 6 cut(s) | 132, 234, 261, 408, 449, 1134 |
| BssSI | CACGAG | 2 cut(s) | 64, 170 |
| Bst2BI | CACGAG | 2 cut(s) | 64, 170 |
| Bst2UI | CCWGG | 1 cut(s) | 457 |
| Bst4CI | ACNGT | 1 cut(s) | 617 |
| Bst6I | CTCTTC | 1 cut(s) | 956 |
| BstACI | GRCGYC | 6 cut(s) | 132, 234, 261, 408, 449, 1134 |
| BstBAI | YACGTR | 2 cut(s) | 222, 255 |
| BstC8I | GCNNGC | 5 cut(s) | 37, 159, 200, 204, 719 |
| BstDEI | CTNAG | 4 cut(s) | 747, 755, 917, 1104 |
| BstDSI | CCRYGG | 2 cut(s) | 81, 780 |
| BstF5I | GGATG | 1 cut(s) | 189 |
| BstH2I | RGCGCY | 1 cut(s) | 411 |
| BstHHI | GCGC | 4 cut(s) | 168, 177, 410, 875 |
| BstKTI | GATC | 3 cut(s) | 141, 585, 868 |
| BstMAI | GTCTC | 4 cut(s) | 423, 679, 886, 1118 |
| BstMBI | GATC | 3 cut(s) | 138, 582, 865 |
| BstMCI | CGRYCG | 3 cut(s) | 315, 336, 841 |
| BstNI | CCWGG | 1 cut(s) | 457 |
| BstSCI | CCNGG | 3 cut(s) | 303, 309, 455 |
| BstV1I | GCAGC | 1 cut(s) | 158 |
| BstV2I | GAAGAC | 1 cut(s) | 992 |
| BstX2I | RGATCY | 2 cut(s) | 138, 865 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 17, 157 |
| BstYI | RGATCY | 2 cut(s) | 138, 865 |
| BstZI | CGGCCG | 2 cut(s) | 333, 838 |
| BsuI | GTATCC | 1 cut(s) | 840 |
| BsuRI | GGCC | 9 cut(s) | 42, 161, 230, 335, 840, 908, 1044, 1079, 1112 |
| BtgI | CCRYGG | 2 cut(s) | 81, 780 |
| BtsCI | GGATG | 1 cut(s) | 189 |
| BtsIMutI | CAGTG | 1 cut(s) | 622 |
| BtuMI | TCGCGA | 2 cut(s) | 50, 1052 |
| BveI | ACCTGC | 1 cut(s) | 134 |
| Cac8I | GCNNGC | 5 cut(s) | 37, 159, 200, 204, 719 |
| CfoI | GCGC | 4 cut(s) | 168, 177, 410, 875 |
| Cfr10I | RCCGGY | 2 cut(s) | 14, 1044 |
| Cfr13I | GGNCC | 2 cut(s) | 307, 1110 |
| Cfr42I | CCGCGG | 1 cut(s) | 84 |
| Csp6I | GTAC | 4 cut(s) | 609, 952, 997, 1015 |
| CviAII | CATG | 2 cut(s) | 299, 814 |
| CviQI | GTAC | 4 cut(s) | 609, 952, 997, 1015 |
| DdeI | CTNAG | 4 cut(s) | 747, 755, 917, 1104 |
| DinI | GGCGCC | 1 cut(s) | 409 |
| DpnI | GATC | 3 cut(s) | 140, 584, 867 |
| DpnII | GATC | 3 cut(s) | 138, 582, 865 |
| DriI | GACNNNNNGTC | 1 cut(s) | 448 |
| EaeI | YGGCCR | 4 cut(s) | 159, 333, 838, 906 |
| EagI | CGGCCG | 2 cut(s) | 333, 838 |
| Eam1104I | CTCTTC | 1 cut(s) | 956 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 448 |
| EarI | CTCTTC | 1 cut(s) | 956 |
| EciI | GGCGGA | 3 cut(s) | 67, 265, 346 |
| EclXI | CGGCCG | 2 cut(s) | 333, 838 |
| Eco31I | GGTCTC | 1 cut(s) | 886 |
| Eco32I | GATATC | 2 cut(s) | 268, 514 |
| Eco47I | GGWCC | 1 cut(s) | 307 |
| Eco52I | CGGCCG | 2 cut(s) | 333, 838 |
| Eco57I | CTGAAG | 1 cut(s) | 718 |
| Eco72I | CACGTG | 2 cut(s) | 222, 255 |
| Eco88I | CYCGRG | 2 cut(s) | 1030, 1121 |
| EcoO109I | RGGNCCY | 2 cut(s) | 307, 1110 |
| EcoRII | CCWGG | 1 cut(s) | 455 |
| EcoRV | GATATC | 2 cut(s) | 268, 514 |
| EgeI | GGCGCC | 1 cut(s) | 409 |
| EheI | GGCGCC | 1 cut(s) | 409 |
| Esp3I | CGTCTC | 2 cut(s) | 423, 679 |
| FaeI | CATG | 2 cut(s) | 302, 817 |
| FaiI | YATR | 5 cut(s) | 300, 815, 824, 855, 1129 |
| FaqI | GGGAC | 1 cut(s) | 293 |
| FatI | CATG | 2 cut(s) | 298, 813 |
| FauI | CCCGC | 2 cut(s) | 299, 648 |
| FblI | GTMKAC | 2 cut(s) | 378, 452 |
| Fnu4HI | GCNGC | 9 cut(s) | 40, 81, 147, 237, 240, 295, 360, 363, 447 |
| FokI | GGATG | 1 cut(s) | 196 |
| Fsp4HI | GCNGC | 9 cut(s) | 40, 81, 147, 237, 240, 295, 360, 363, 447 |
| FspBI | CTAG | 2 cut(s) | 44, 939 |
| GlaI | GCGC | 4 cut(s) | 167, 176, 409, 874 |
| GluI | GCNGC | 9 cut(s) | 40, 81, 147, 237, 240, 295, 360, 363, 447 |
| GsaI | CCCAGC | 1 cut(s) | 873 |
| GsuI | CTGGAG | 2 cut(s) | 476, 581 |
| HaeII | RGCGCY | 1 cut(s) | 411 |
| HaeIII | GGCC | 9 cut(s) | 42, 161, 230, 335, 840, 908, 1044, 1079, 1112 |
| HapII | CCGG | 6 cut(s) | 15, 304, 311, 509, 626, 1045 |
| HhaI | GCGC | 4 cut(s) | 168, 177, 410, 875 |
| Hin1I | GRCGYC | 6 cut(s) | 132, 234, 261, 408, 449, 1134 |
| Hin1II | CATG | 2 cut(s) | 302, 817 |
| Hin6I | GCGC | 4 cut(s) | 166, 175, 408, 873 |
| HinP1I | GCGC | 4 cut(s) | 166, 175, 408, 873 |
| HincII | GTYRAC | 2 cut(s) | 379, 453 |
| HindII | GTYRAC | 2 cut(s) | 379, 453 |
| HindIII | AAGCTT | 1 cut(s) | 719 |
| HinfI | GANTC | 9 cut(s) | 6, 62, 104, 329, 338, 380, 551, 924, 1035 |
| HpaII | CCGG | 6 cut(s) | 15, 304, 311, 509, 626, 1045 |
| Hpy166II | GTNNAC | 2 cut(s) | 379, 453 |
| Hpy188I | TCNGA | 5 cut(s) | 529, 820, 865, 1143, 1151 |
| Hpy188III | TCNNGA | 8 cut(s) | 49, 181, 493, 509, 800, 982, 1051, 1121 |
| Hpy8I | GTNNAC | 2 cut(s) | 379, 453 |
| Hpy99I | CGWCG | 8 cut(s) | 134, 236, 263, 446, 454, 778, 1139, 1147 |
| HpyAV | CCTTC | 2 cut(s) | 663, 742 |
| HpyCH4III | ACNGT | 1 cut(s) | 617 |
| HpyCH4IV | ACGT | 4 cut(s) | 221, 254, 858, 1145 |
| HpyCH4V | TGCA | 2 cut(s) | 69, 225 |
| HpyF3I | CTNAG | 4 cut(s) | 747, 755, 917, 1104 |
| HpySE526I | ACGT | 4 cut(s) | 221, 254, 858, 1145 |
| Hsp92I | GRCGYC | 6 cut(s) | 132, 234, 261, 408, 449, 1134 |
| Hsp92II | CATG | 2 cut(s) | 302, 817 |
| HspAI | GCGC | 4 cut(s) | 166, 175, 408, 873 |
| KasI | GGCGCC | 1 cut(s) | 407 |
| KflI | GGGWCCC | 1 cut(s) | 307 |
| Kpn2I | TCCGGA | 1 cut(s) | 508 |
| KspI | CCGCGG | 1 cut(s) | 84 |
| Kzo9I | GATC | 3 cut(s) | 138, 582, 865 |
| LmnI | GCTCC | 4 cut(s) | 211, 495, 511, 1103 |
| Lsp1109I | GCAGC | 1 cut(s) | 158 |
| MaeI | CTAG | 2 cut(s) | 44, 939 |
| MaeII | ACGT | 4 cut(s) | 221, 254, 858, 1145 |
| MaeIII | GTNAC | 2 cut(s) | 217, 250 |
| MalI | GATC | 3 cut(s) | 140, 584, 867 |
| MbiI | CCGCTC | 1 cut(s) | 1103 |
| MboI | GATC | 3 cut(s) | 138, 582, 865 |
| MboII | GAAGA | 7 cut(s) | 316, 529, 717, 720, 973, 979, 997 |
| MflI | RGATCY | 2 cut(s) | 138, 865 |
| MlsI | TGGCCA | 2 cut(s) | 161, 908 |
| MluCI | AATT | 4 cut(s) | 388, 475, 688, 704 |
| MluNI | TGGCCA | 2 cut(s) | 161, 908 |
| Mly113I | GGCGCC | 1 cut(s) | 408 |
| MlyI | GAGTC | 7 cut(s) | 56, 98, 323, 347, 374, 545, 918 |
| MmeI | TCCRAC | 2 cut(s) | 767, 769 |
| Mox20I | TGGCCA | 2 cut(s) | 161, 908 |
| MroI | TCCGGA | 1 cut(s) | 508 |
| MscI | TGGCCA | 2 cut(s) | 161, 908 |
| Msp20I | TGGCCA | 2 cut(s) | 161, 908 |
| MspA1I | CMGCKG | 2 cut(s) | 83, 921 |
| MspI | CCGG | 6 cut(s) | 15, 304, 311, 509, 626, 1045 |
| MspR9I | CCNGG | 3 cut(s) | 305, 311, 457 |
| MvaI | CCWGG | 1 cut(s) | 457 |
| NarI | GGCGCC | 1 cut(s) | 408 |
| NciI | CCSGG | 2 cut(s) | 305, 311 |
| NdeII | GATC | 3 cut(s) | 138, 582, 865 |
| NlaIII | CATG | 2 cut(s) | 302, 817 |
| NlaIV | GGNNCC | 7 cut(s) | 207, 308, 309, 409, 867, 1099, 1111 |
| NmeAIII | GCCGAG | 6 cut(s) | 86, 122, 311, 361, 706, 863 |
| NmuCI | GTSAC | 2 cut(s) | 217, 250 |
| NruI | TCGCGA | 2 cut(s) | 50, 1052 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 333, 438, 1010 |
| PfeI | GAWTC | 2 cut(s) | 6, 1035 |
| Pfl23II | CGTACG | 1 cut(s) | 1014 |
| PflFI | GACNNNGTC | 1 cut(s) | 305 |
| PkrI | GCNGC | 9 cut(s) | 41, 82, 148, 238, 241, 296, 361, 364, 448 |
| PleI | GAGTC | 7 cut(s) | 56, 98, 323, 346, 374, 545, 918 |
| PluTI | GGCGCC | 1 cut(s) | 411 |
| PmaCI | CACGTG | 2 cut(s) | 222, 255 |
| PmlI | CACGTG | 2 cut(s) | 222, 255 |
| PpsI | GAGTC | 7 cut(s) | 56, 98, 323, 346, 374, 545, 918 |
| Ppu21I | YACGTR | 2 cut(s) | 222, 255 |
| PpuMI | RGGWCCY | 1 cut(s) | 307 |
| Psp1406I | AACGTT | 1 cut(s) | 858 |
| Psp5II | RGGWCCY | 1 cut(s) | 307 |
| Psp6I | CCWGG | 1 cut(s) | 455 |
| PspCI | CACGTG | 2 cut(s) | 222, 255 |
| PspFI | CCCAGC | 1 cut(s) | 869 |
| PspGI | CCWGG | 1 cut(s) | 455 |
| PspLI | CGTACG | 1 cut(s) | 1014 |
| PspN4I | GGNNCC | 7 cut(s) | 207, 308, 309, 409, 867, 1099, 1111 |
| PspPI | GGNCC | 2 cut(s) | 307, 1110 |
| PspPPI | RGGWCCY | 1 cut(s) | 307 |
| PsuI | RGATCY | 2 cut(s) | 138, 865 |
| PsyI | GACNNNGTC | 1 cut(s) | 305 |
| RruI | TCGCGA | 2 cut(s) | 50, 1052 |
| RsaI | GTAC | 4 cut(s) | 610, 953, 998, 1016 |
| RsaNI | GTAC | 4 cut(s) | 609, 952, 997, 1015 |
| SacII | CCGCGG | 1 cut(s) | 84 |
| SalI | GTCGAC | 2 cut(s) | 377, 451 |
| SatI | GCNGC | 9 cut(s) | 40, 81, 147, 237, 240, 295, 360, 363, 447 |
| Sau3AI | GATC | 3 cut(s) | 138, 582, 865 |
| Sau96I | GGNCC | 2 cut(s) | 307, 1110 |
| SchI | GAGTC | 7 cut(s) | 56, 98, 323, 347, 374, 545, 918 |
| ScrFI | CCNGG | 3 cut(s) | 305, 311, 457 |
| SfoI | GGCGCC | 1 cut(s) | 409 |
| Sfr303I | CCGCGG | 1 cut(s) | 84 |
| SgrBI | CCGCGG | 1 cut(s) | 84 |
| SinI | GGWCC | 1 cut(s) | 307 |
| Sse9I | AATT | 4 cut(s) | 388, 475, 688, 704 |
| SspDI | GGCGCC | 1 cut(s) | 407 |
| SspMI | CTAG | 2 cut(s) | 44, 939 |
| StyD4I | CCNGG | 3 cut(s) | 303, 309, 455 |
| TaaI | ACNGT | 1 cut(s) | 617 |
| TaiI | ACGT | 4 cut(s) | 224, 257, 861, 1148 |
| TasI | AATT | 4 cut(s) | 388, 475, 688, 704 |
| TauI | GCSGC | 8 cut(s) | 42, 83, 239, 242, 297, 362, 365, 449 |
| TfiI | GAWTC | 2 cut(s) | 6, 1035 |
| TscAI | CASTG | 1 cut(s) | 622 |
| TseFI | GTSAC | 2 cut(s) | 217, 250 |
| TseI | GCWGC | 1 cut(s) | 146 |
| Tsp45I | GTSAC | 2 cut(s) | 217, 250 |
| TspDTI | ATGAA | 1 cut(s) | 450 |
| TspGWI | ACGGA | 4 cut(s) | 405, 626, 769, 819 |
| TspRI | CASTG | 1 cut(s) | 622 |
| Tth111I | GACNNNGTC | 1 cut(s) | 305 |
| VpaK11BI | GGWCC | 1 cut(s) | 307 |
| XapI | RAATTY | 2 cut(s) | 475, 704 |
| XmiI | GTMKAC | 2 cut(s) | 378, 452 |
| XspI | CTAG | 2 cut(s) | 44, 939 |