Prupe.1G093900_v2.0.a1

ZINC FINGER protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
7237624 .. 7239570
1947 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G093900.1

Sequence Viewer

Length: 1152 bp
ATGGGAATCCAAGCCGGTGGTTGGAGGACAATGGCTGGCGGCCTAGTCGCGAAGCCGTGCGACTCGTGCAAGAACTCCGCCGCGGTGCTGTTCTGCCGAGCCGACTCGGCTTTCCTCTGCTTGACCTGCGACGCCAAGATCCACGCAGCCAACAAGCTGGCCACGCGCCACGAGCGCGTCTGGATGTGCGAGGTCTGCGAGCAGGCTCCTGCGTCAGTCACGTGCAAGGCCGACGCCGCCGCCCTCTGCGTCACGTGCGACGCCGATATCCACTCCGCCAACCCCCTCTCCCGCCGCCATGACCGGGTCCCGGTCGAGCCGTTCTTCGACTCGGCCGAGTCTATCATCGTCAAGTCCGCCGCCGCCTCCTCCTCTGTCGACTCCCTCAATTTCCTACTCCCAAACGGCGCCGTTCCGTCTCACACTAAAGACGATGAAAACGACGCGGCGTCGACCTGGCTTATCCCCAACTTGAATTTCAACTCGAAGCTCCAGATGGATATTGCTCCGGATATCATCAAGTCCTCCGAGTTGTTCTTCCCCGAAATGGACTCGTTGCTGGAGTTCGATTACCCGAACCCGATCCACCACGATATTTCGGGTTCAGGTACGGACAGTGTTGTTCCGGTTCAACCCGACCCGCTACCACCCCCTTCACTCAACATCAACCGCGTCTCTGCCGAGCAAAATTGCTTCGACCTCGAATTTTGTAGAAGCAAGCTTTCTTCTTCCTTCAGCTATCCAACTCAGTCGCTCAGCCAAAGCGTTTCCTCGTCGTCCGTGGAGGTTGGAGTTGTTCCTGACGGAAACTCCATGTCCGATATATCGTATCCTTTCGGCCGAAACGCGAACCATAACGTTTCGGATCCCAGCGCACAGGTCTCGGCGACCACCGCGAACCAAGTGGCCACACAGCTCAGCGGACTCGACAGGGAGGCTAGGGTTTTGAGGTACAGAGAGAAGAGGAAGAACCGAAAGTTCCAGAAGACCATCAGGTACGCTTCGCGGAAAGCGTACGCCGAAACTCGCCCGAGAATCAAAGGCCGGTTCGCGAAACGCACCGAAACCGAAATCGAGGCCGTTGATAACATCTACGGCTCCGCTCAGGGGGCCTTTATTCCCGAGACATACGGCGTCGTTCCGACGTTCTGA

Protein Analysis

384

Amino Acids

41.69

Weight (kDa)

5.94

Isoelectric Point (pI)

47.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 134
AccB1I GGYRCC 1 cut(s) 407
AccBSI CCGCTC 1 cut(s) 1103
AccI GTMKAC 2 cut(s) 378, 452
AccIII TCCGGA 1 cut(s) 508
AclI AACGTT 1 cut(s) 858
AclWI GGATC 4 cut(s) 133, 577, 860, 873
AcoI YGGCCR 4 cut(s) 159, 333, 838, 906
AcsI RAATTY 2 cut(s) 475, 704
AcuI CTGAAG 1 cut(s) 718
AcvI CACGTG 2 cut(s) 222, 255
AcyI GRCGYC 6 cut(s) 132, 234, 261, 408, 449, 1134
AfaI GTAC 4 cut(s) 610, 953, 998, 1016
AfiI CCNNNNNNNGG 5 cut(s) 21, 304, 310, 547, 1107
AgsI TTSAA 3 cut(s) 475, 481, 632
AhdI GACNNNNNGTC 1 cut(s) 448
AjnI CCWGG 1 cut(s) 455
AjuI GAANNNNNNNTTGG 2 cut(s) 461, 493
AluBI AGCT 5 cut(s) 157, 490, 721, 738, 916
AluI AGCT 5 cut(s) 157, 490, 721, 738, 916
Alw26I GTCTC 4 cut(s) 423, 679, 886, 1118
AlwI GGATC 4 cut(s) 133, 577, 860, 873
Ama87I CYCGRG 2 cut(s) 1030, 1121
Aor13HI TCCGGA 1 cut(s) 508
AoxI GGCC 9 cut(s) 40, 159, 228, 333, 838, 906, 1042, 1077, 1110
ApeKI GCWGC 1 cut(s) 146
ApoI RAATTY 2 cut(s) 475, 704
AspLEI GCGC 4 cut(s) 168, 177, 410, 875
AspS9I GGNCC 2 cut(s) 307, 1110
AsuC2I CCSGG 2 cut(s) 305, 311
AvaI CYCGRG 2 cut(s) 1030, 1121
AvaII GGWCC 1 cut(s) 307
BalI TGGCCA 2 cut(s) 161, 908
BamHI GGATCC 1 cut(s) 865
BanI GGYRCC 1 cut(s) 407
BauI CACGAG 2 cut(s) 64, 170
BbrPI CACGTG 2 cut(s) 222, 255
BbsI GAAGAC 1 cut(s) 992
BbvI GCAGC 1 cut(s) 158
BccI CCATC 2 cut(s) 490, 998
BceAI ACGGC 7 cut(s) 40, 304, 395, 421, 1064, 1111, 1147
BcgI CGANNNNNNTGC 2 cut(s) 864, 898
BciT130I CCWGG 1 cut(s) 457
BciVI GTATCC 1 cut(s) 840
BcnI CCSGG 2 cut(s) 305, 311
BcoDI GTCTC 4 cut(s) 423, 679, 886, 1118
BfaI CTAG 2 cut(s) 44, 939
BfoI RGCGCY 1 cut(s) 411
BfuAI ACCTGC 1 cut(s) 134
BfuI GTATCC 1 cut(s) 840
BglI GCCNNNNNGGC 1 cut(s) 107
BisI GCNGC 9 cut(s) 40, 81, 147, 237, 240, 295, 360, 363, 447
BlpI GCTNAGC 2 cut(s) 755, 917
BlsI GCNGC 9 cut(s) 41, 82, 148, 238, 241, 296, 361, 364, 448
Bme1390I CCNGG 3 cut(s) 305, 311, 457
Bme18I GGWCC 1 cut(s) 307
BmeRI GACNNNNNGTC 1 cut(s) 448
BmeT110I CYCGRG 2 cut(s) 1030, 1121
BmgT120I GGNCC 2 cut(s) 307, 1110
BmiI GGNNCC 7 cut(s) 207, 308, 309, 409, 867, 1099, 1111
BmrFI CCNGG 3 cut(s) 305, 311, 457
BpiI GAAGAC 1 cut(s) 992
BpmI CTGGAG 2 cut(s) 476, 581
Bpu10I CCTNAGC 1 cut(s) 1104
Bpu1102I GCTNAGC 2 cut(s) 755, 917
BpuMI CCSGG 2 cut(s) 305, 311
BsaAI YACGTR 2 cut(s) 222, 255
BsaHI GRCGYC 6 cut(s) 132, 234, 261, 408, 449, 1134
BsaI GGTCTC 1 cut(s) 886
BsaJI CCNNGG 2 cut(s) 81, 780
BsaWI WCCGGW 2 cut(s) 508, 625
BsaXI ACNNNNNCTCC 4 cut(s) 272, 302, 794, 824
Bsc4I CCNNNNNNNGG 5 cut(s) 21, 304, 310, 547, 1107
Bse118I RCCGGY 2 cut(s) 14, 1044
BseAI TCCGGA 1 cut(s) 508
BseBI CCWGG 1 cut(s) 457
BseDI CCNNGG 2 cut(s) 81, 780
BseGI GGATG 1 cut(s) 189
BseLI CCNNNNNNNGG 5 cut(s) 21, 304, 310, 547, 1107
BseMII CTCAG 4 cut(s) 761, 769, 931, 1118
BseRI GAGGAG 2 cut(s) 358, 361
BseX3I CGGCCG 2 cut(s) 333, 838
BseXI GCAGC 1 cut(s) 158
BseYI CCCAGC 1 cut(s) 869
Bsh1285I CGRYCG 3 cut(s) 315, 336, 841
BshFI GGCC 9 cut(s) 42, 161, 230, 335, 840, 908, 1044, 1079, 1112
BshNI GGYRCC 1 cut(s) 407
BsiEI CGRYCG 3 cut(s) 315, 336, 841
BsiHKCI CYCGRG 2 cut(s) 1030, 1121
BsiSI CCGG 6 cut(s) 15, 304, 311, 509, 626, 1045
BsiWI CGTACG 1 cut(s) 1014
BslFI GGGAC 1 cut(s) 293
BslI CCNNNNNNNGG 5 cut(s) 21, 304, 310, 547, 1107
BsmAI GTCTC 4 cut(s) 423, 679, 886, 1118
BsmBI CGTCTC 2 cut(s) 423, 679
BsmFI GGGAC 1 cut(s) 293
BsnI GGCC 9 cut(s) 42, 161, 230, 335, 840, 908, 1044, 1079, 1112
Bso31I GGTCTC 1 cut(s) 886
BsoBI CYCGRG 2 cut(s) 1030, 1121
Bsp13I TCCGGA 1 cut(s) 508
Bsp143I GATC 3 cut(s) 138, 582, 865
Bsp1720I GCTNAGC 2 cut(s) 755, 917
Bsp68I TCGCGA 2 cut(s) 50, 1052
BspANI GGCC 9 cut(s) 42, 161, 230, 335, 840, 908, 1044, 1079, 1112
BspCNI CTCAG 4 cut(s) 760, 768, 930, 1117
BspEI TCCGGA 1 cut(s) 508
BspLI GGNNCC 7 cut(s) 207, 308, 309, 409, 867, 1099, 1111
BspMI ACCTGC 1 cut(s) 134
BspPI GGATC 4 cut(s) 133, 577, 860, 873
BspT107I GGYRCC 1 cut(s) 407
BspTNI GGTCTC 1 cut(s) 886
BsrBI CCGCTC 1 cut(s) 1103
BsrFI RCCGGY 2 cut(s) 14, 1044
BssAI RCCGGY 2 cut(s) 14, 1044
BssECI CCNNGG 2 cut(s) 81, 780
BssMI GATC 3 cut(s) 138, 582, 865
BssNI GRCGYC 6 cut(s) 132, 234, 261, 408, 449, 1134
BssSI CACGAG 2 cut(s) 64, 170
Bst2BI CACGAG 2 cut(s) 64, 170
Bst2UI CCWGG 1 cut(s) 457
Bst4CI ACNGT 1 cut(s) 617
Bst6I CTCTTC 1 cut(s) 956
BstACI GRCGYC 6 cut(s) 132, 234, 261, 408, 449, 1134
BstBAI YACGTR 2 cut(s) 222, 255
BstC8I GCNNGC 5 cut(s) 37, 159, 200, 204, 719
BstDEI CTNAG 4 cut(s) 747, 755, 917, 1104
BstDSI CCRYGG 2 cut(s) 81, 780
BstF5I GGATG 1 cut(s) 189
BstH2I RGCGCY 1 cut(s) 411
BstHHI GCGC 4 cut(s) 168, 177, 410, 875
BstKTI GATC 3 cut(s) 141, 585, 868
BstMAI GTCTC 4 cut(s) 423, 679, 886, 1118
BstMBI GATC 3 cut(s) 138, 582, 865
BstMCI CGRYCG 3 cut(s) 315, 336, 841
BstNI CCWGG 1 cut(s) 457
BstSCI CCNGG 3 cut(s) 303, 309, 455
BstV1I GCAGC 1 cut(s) 158
BstV2I GAAGAC 1 cut(s) 992
BstX2I RGATCY 2 cut(s) 138, 865
BstXI CCANNNNNNTGG 2 cut(s) 17, 157
BstYI RGATCY 2 cut(s) 138, 865
BstZI CGGCCG 2 cut(s) 333, 838
BsuI GTATCC 1 cut(s) 840
BsuRI GGCC 9 cut(s) 42, 161, 230, 335, 840, 908, 1044, 1079, 1112
BtgI CCRYGG 2 cut(s) 81, 780
BtsCI GGATG 1 cut(s) 189
BtsIMutI CAGTG 1 cut(s) 622
BtuMI TCGCGA 2 cut(s) 50, 1052
BveI ACCTGC 1 cut(s) 134
Cac8I GCNNGC 5 cut(s) 37, 159, 200, 204, 719
CfoI GCGC 4 cut(s) 168, 177, 410, 875
Cfr10I RCCGGY 2 cut(s) 14, 1044
Cfr13I GGNCC 2 cut(s) 307, 1110
Cfr42I CCGCGG 1 cut(s) 84
Csp6I GTAC 4 cut(s) 609, 952, 997, 1015
CviAII CATG 2 cut(s) 299, 814
CviQI GTAC 4 cut(s) 609, 952, 997, 1015
DdeI CTNAG 4 cut(s) 747, 755, 917, 1104
DinI GGCGCC 1 cut(s) 409
DpnI GATC 3 cut(s) 140, 584, 867
DpnII GATC 3 cut(s) 138, 582, 865
DriI GACNNNNNGTC 1 cut(s) 448
EaeI YGGCCR 4 cut(s) 159, 333, 838, 906
EagI CGGCCG 2 cut(s) 333, 838
Eam1104I CTCTTC 1 cut(s) 956
Eam1105I GACNNNNNGTC 1 cut(s) 448
EarI CTCTTC 1 cut(s) 956
EciI GGCGGA 3 cut(s) 67, 265, 346
EclXI CGGCCG 2 cut(s) 333, 838
Eco31I GGTCTC 1 cut(s) 886
Eco32I GATATC 2 cut(s) 268, 514
Eco47I GGWCC 1 cut(s) 307
Eco52I CGGCCG 2 cut(s) 333, 838
Eco57I CTGAAG 1 cut(s) 718
Eco72I CACGTG 2 cut(s) 222, 255
Eco88I CYCGRG 2 cut(s) 1030, 1121
EcoO109I RGGNCCY 2 cut(s) 307, 1110
EcoRII CCWGG 1 cut(s) 455
EcoRV GATATC 2 cut(s) 268, 514
EgeI GGCGCC 1 cut(s) 409
EheI GGCGCC 1 cut(s) 409
Esp3I CGTCTC 2 cut(s) 423, 679
FaeI CATG 2 cut(s) 302, 817
FaiI YATR 5 cut(s) 300, 815, 824, 855, 1129
FaqI GGGAC 1 cut(s) 293
FatI CATG 2 cut(s) 298, 813
FauI CCCGC 2 cut(s) 299, 648
FblI GTMKAC 2 cut(s) 378, 452
Fnu4HI GCNGC 9 cut(s) 40, 81, 147, 237, 240, 295, 360, 363, 447
FokI GGATG 1 cut(s) 196
Fsp4HI GCNGC 9 cut(s) 40, 81, 147, 237, 240, 295, 360, 363, 447
FspBI CTAG 2 cut(s) 44, 939
GlaI GCGC 4 cut(s) 167, 176, 409, 874
GluI GCNGC 9 cut(s) 40, 81, 147, 237, 240, 295, 360, 363, 447
GsaI CCCAGC 1 cut(s) 873
GsuI CTGGAG 2 cut(s) 476, 581
HaeII RGCGCY 1 cut(s) 411
HaeIII GGCC 9 cut(s) 42, 161, 230, 335, 840, 908, 1044, 1079, 1112
HapII CCGG 6 cut(s) 15, 304, 311, 509, 626, 1045
HhaI GCGC 4 cut(s) 168, 177, 410, 875
Hin1I GRCGYC 6 cut(s) 132, 234, 261, 408, 449, 1134
Hin1II CATG 2 cut(s) 302, 817
Hin6I GCGC 4 cut(s) 166, 175, 408, 873
HinP1I GCGC 4 cut(s) 166, 175, 408, 873
HincII GTYRAC 2 cut(s) 379, 453
HindII GTYRAC 2 cut(s) 379, 453
HindIII AAGCTT 1 cut(s) 719
HinfI GANTC 9 cut(s) 6, 62, 104, 329, 338, 380, 551, 924, 1035
HpaII CCGG 6 cut(s) 15, 304, 311, 509, 626, 1045
Hpy166II GTNNAC 2 cut(s) 379, 453
Hpy188I TCNGA 5 cut(s) 529, 820, 865, 1143, 1151
Hpy188III TCNNGA 8 cut(s) 49, 181, 493, 509, 800, 982, 1051, 1121
Hpy8I GTNNAC 2 cut(s) 379, 453
Hpy99I CGWCG 8 cut(s) 134, 236, 263, 446, 454, 778, 1139, 1147
HpyAV CCTTC 2 cut(s) 663, 742
HpyCH4III ACNGT 1 cut(s) 617
HpyCH4IV ACGT 4 cut(s) 221, 254, 858, 1145
HpyCH4V TGCA 2 cut(s) 69, 225
HpyF3I CTNAG 4 cut(s) 747, 755, 917, 1104
HpySE526I ACGT 4 cut(s) 221, 254, 858, 1145
Hsp92I GRCGYC 6 cut(s) 132, 234, 261, 408, 449, 1134
Hsp92II CATG 2 cut(s) 302, 817
HspAI GCGC 4 cut(s) 166, 175, 408, 873
KasI GGCGCC 1 cut(s) 407
KflI GGGWCCC 1 cut(s) 307
Kpn2I TCCGGA 1 cut(s) 508
KspI CCGCGG 1 cut(s) 84
Kzo9I GATC 3 cut(s) 138, 582, 865
LmnI GCTCC 4 cut(s) 211, 495, 511, 1103
Lsp1109I GCAGC 1 cut(s) 158
MaeI CTAG 2 cut(s) 44, 939
MaeII ACGT 4 cut(s) 221, 254, 858, 1145
MaeIII GTNAC 2 cut(s) 217, 250
MalI GATC 3 cut(s) 140, 584, 867
MbiI CCGCTC 1 cut(s) 1103
MboI GATC 3 cut(s) 138, 582, 865
MboII GAAGA 7 cut(s) 316, 529, 717, 720, 973, 979, 997
MflI RGATCY 2 cut(s) 138, 865
MlsI TGGCCA 2 cut(s) 161, 908
MluCI AATT 4 cut(s) 388, 475, 688, 704
MluNI TGGCCA 2 cut(s) 161, 908
Mly113I GGCGCC 1 cut(s) 408
MlyI GAGTC 7 cut(s) 56, 98, 323, 347, 374, 545, 918
MmeI TCCRAC 2 cut(s) 767, 769
Mox20I TGGCCA 2 cut(s) 161, 908
MroI TCCGGA 1 cut(s) 508
MscI TGGCCA 2 cut(s) 161, 908
Msp20I TGGCCA 2 cut(s) 161, 908
MspA1I CMGCKG 2 cut(s) 83, 921
MspI CCGG 6 cut(s) 15, 304, 311, 509, 626, 1045
MspR9I CCNGG 3 cut(s) 305, 311, 457
MvaI CCWGG 1 cut(s) 457
NarI GGCGCC 1 cut(s) 408
NciI CCSGG 2 cut(s) 305, 311
NdeII GATC 3 cut(s) 138, 582, 865
NlaIII CATG 2 cut(s) 302, 817
NlaIV GGNNCC 7 cut(s) 207, 308, 309, 409, 867, 1099, 1111
NmeAIII GCCGAG 6 cut(s) 86, 122, 311, 361, 706, 863
NmuCI GTSAC 2 cut(s) 217, 250
NruI TCGCGA 2 cut(s) 50, 1052
PcsI WCGNNNNNNNCGW 3 cut(s) 333, 438, 1010
PfeI GAWTC 2 cut(s) 6, 1035
Pfl23II CGTACG 1 cut(s) 1014
PflFI GACNNNGTC 1 cut(s) 305
PkrI GCNGC 9 cut(s) 41, 82, 148, 238, 241, 296, 361, 364, 448
PleI GAGTC 7 cut(s) 56, 98, 323, 346, 374, 545, 918
PluTI GGCGCC 1 cut(s) 411
PmaCI CACGTG 2 cut(s) 222, 255
PmlI CACGTG 2 cut(s) 222, 255
PpsI GAGTC 7 cut(s) 56, 98, 323, 346, 374, 545, 918
Ppu21I YACGTR 2 cut(s) 222, 255
PpuMI RGGWCCY 1 cut(s) 307
Psp1406I AACGTT 1 cut(s) 858
Psp5II RGGWCCY 1 cut(s) 307
Psp6I CCWGG 1 cut(s) 455
PspCI CACGTG 2 cut(s) 222, 255
PspFI CCCAGC 1 cut(s) 869
PspGI CCWGG 1 cut(s) 455
PspLI CGTACG 1 cut(s) 1014
PspN4I GGNNCC 7 cut(s) 207, 308, 309, 409, 867, 1099, 1111
PspPI GGNCC 2 cut(s) 307, 1110
PspPPI RGGWCCY 1 cut(s) 307
PsuI RGATCY 2 cut(s) 138, 865
PsyI GACNNNGTC 1 cut(s) 305
RruI TCGCGA 2 cut(s) 50, 1052
RsaI GTAC 4 cut(s) 610, 953, 998, 1016
RsaNI GTAC 4 cut(s) 609, 952, 997, 1015
SacII CCGCGG 1 cut(s) 84
SalI GTCGAC 2 cut(s) 377, 451
SatI GCNGC 9 cut(s) 40, 81, 147, 237, 240, 295, 360, 363, 447
Sau3AI GATC 3 cut(s) 138, 582, 865
Sau96I GGNCC 2 cut(s) 307, 1110
SchI GAGTC 7 cut(s) 56, 98, 323, 347, 374, 545, 918
ScrFI CCNGG 3 cut(s) 305, 311, 457
SfoI GGCGCC 1 cut(s) 409
Sfr303I CCGCGG 1 cut(s) 84
SgrBI CCGCGG 1 cut(s) 84
SinI GGWCC 1 cut(s) 307
Sse9I AATT 4 cut(s) 388, 475, 688, 704
SspDI GGCGCC 1 cut(s) 407
SspMI CTAG 2 cut(s) 44, 939
StyD4I CCNGG 3 cut(s) 303, 309, 455
TaaI ACNGT 1 cut(s) 617
TaiI ACGT 4 cut(s) 224, 257, 861, 1148
TasI AATT 4 cut(s) 388, 475, 688, 704
TauI GCSGC 8 cut(s) 42, 83, 239, 242, 297, 362, 365, 449
TfiI GAWTC 2 cut(s) 6, 1035
TscAI CASTG 1 cut(s) 622
TseFI GTSAC 2 cut(s) 217, 250
TseI GCWGC 1 cut(s) 146
Tsp45I GTSAC 2 cut(s) 217, 250
TspDTI ATGAA 1 cut(s) 450
TspGWI ACGGA 4 cut(s) 405, 626, 769, 819
TspRI CASTG 1 cut(s) 622
Tth111I GACNNNGTC 1 cut(s) 305
VpaK11BI GGWCC 1 cut(s) 307
XapI RAATTY 2 cut(s) 475, 704
XmiI GTMKAC 2 cut(s) 378, 452
XspI CTAG 2 cut(s) 44, 939
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.