Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0009638

Physical Location & Seq

Genomic Coordinates Forward (+)

20618054 .. 20619745

Gene Structure 1692 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00348440.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1074 bp

ATGGGACTTCAAGCCGGTTGGACCCTGCCGGGGCTCACCCCCAAGCCCTGCGACACCTGCAAGTCGTCGCCGTCGGCCGTCTTCTGCCGCGCCGACTCGGCCTACCTCTGCCTGACCTGCGACTCCAAGATCCACTGCGCCAACAAGGTCGCGTCGCGCCACCAGCGCGTGTGGATGTGCGAGGTCTGCGAGCAAGCTCCGGCGGCCGTCACGTGCAAGGCCGACGCCGCAGCCCTCTGCGTCACGTGCGACGCCGACATCCACTCCGCCAATCCACTCGCGCGTCGTCACGAGCGCGTCCCCGTGGAGCCGTTCCTAGACTCGGCCGAGTCCATCGTCAAATCCACCTCGGTTGCTGGCCTCAACGACGCCGTTTCGTCTCTTAAAAGCGAAGACGCCGATTCTCTGCTGATTCCCAACCTGAATTTCAGCTCCAAGTTCATTGATGCTCTCGACATCAAGCCCGGGGATATGTTCTTCCCGGAAATGGAATCGTTATTCGAACTCGAGTACCCGAACCCGATCCAAAACTCCAGTTCGGGTATGGATAGCGTGGTTCCGGTTCAACCCGACCCGATTCCACCTCCTCCTGTCGTCCACCAACCCCACCCTCATGAAAATTGCTTCGACATTGACTTCTGCCGAAACAAGCTCTCTTCCTCCTTCAGTTATCCAGCTCAATCAATCAGCCAAAGCGTCTCGTCGTCCTCCTTAGAGGTGGGAGTTGTTCCCGACGGAAATTCATTGTCCGACATTTCATATCCGTTCATCCGAAACGTGAACCACAACGGCGTGGAATCCGGCGTAGCGGCGGCTCCGGCTCCGGCGACTCAGCTGAGCGGAGTGGATCGCGAGGCGAGAGTGATGAGGTACAGAGAGAAGAGGAAGAACCGCAAGTTCCAGAAGACAATCCGATACGCCTCCCGGAAAGCCTATGCCGAGACCCGGCCGAGAATCAAAGGCCGGTTCGCGAAACGCACCGAGACCGAAACGGAGGTGATGGATCGGATCTTTAACTCGGCGCCGGGGAGTTATATTGCGGACGCACAATACGGCGTCGTCCCGACGTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009889 GO:0009909 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0031323 GO:0031326 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048580 GO:0048831 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051171 GO:0051239 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0140110 GO:1903506 GO:2000026 GO:2000112 GO:2000241 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

CCT zf-B_box

Protein Analysis

357

Amino Acids

39.02

Weight (kDa)

6.26

Isoelectric Point (pI)

47.71

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-B_box	PF00643	56 - 102	1.4e-06	B-box zinc finger
CCT	PF06203	284 - 326	4.8e-18	CCT motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009638)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G57660
fragaria_vesca	FvH4_4g08980 FvH4_4g08980
malus_domestica	MD00G1017500.v1.1 MD07G1300100.v1.1 MD13G1263800.v1.1 MD16G1265000.v1.1
prunus_persica	Prupe.1G093900_v2.0.a1
pyrus_communis	pycom13g23870 pycom16g23480
rosa_chinensis	RchiOBHm_Chr4g0403841
rosa_laevigata	RLG00000008947
rosa_multiflora	Rmu_sc0005134.1_g000019
rosa_roxburghii	Rroxscaffold_5G00348440
rosa_rugosa	Rorug03G0265600 Rorug04G0045800 Rorug05G0458600
rosa_samantha	Rh4AG121100 Rh4BG114300 Rh4CG129600 Rh4DG114200
rosa_wichuraiana	Rw4G009870

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	65
Acc36I	ACCTGC	2 cut(s)	65, 125
AccB1I	GGYRCC	1 cut(s)	1021
AccBSI	CCGCTC	1 cut(s)	840
AccII	CGCG	9 cut(s)	90, 152, 157, 168, 281, 283, 297, 852, 971
AciI	CCGC	9 cut(s)	88, 203, 228, 267, 809, 812, 840, 892, 1040
AclWI	GGATC	5 cut(s)	124, 517, 855, 1011, 1016
AcoI	YGGCCR	4 cut(s)	75, 204, 324, 947
AcsI	RAATTY	2 cut(s)	424, 739
AcuI	CTGAAG	1 cut(s)	649
AcvI	CACGTG	2 cut(s)	213, 246
AcyI	GRCGYC	6 cut(s)	225, 252, 369, 396, 1022, 1056
AfaI	GTAC	2 cut(s)	512, 872
AfiI	CCNNNNNNNGG	4 cut(s)	30, 322, 487, 945
AgsI	TTSAA	2 cut(s)	11, 566
AjuI	GAANNNNNNNTTGG	2 cut(s)	410, 442
AluBI	AGCT	5 cut(s)	197, 432, 652, 677, 835
AluI	AGCT	5 cut(s)	197, 432, 652, 677, 835
Alw26I	GTCTC	4 cut(s)	384, 703, 935, 977
AlwI	GGATC	5 cut(s)	124, 517, 855, 1011, 1016
Ama87I	CYCGRG	2 cut(s)	464, 506
AoxI	GGCC	8 cut(s)	75, 99, 204, 219, 324, 358, 947, 961
ApeKI	GCWGC	1 cut(s)	230
ApoI	RAATTY	2 cut(s)	424, 739
AspLEI	GCGC	7 cut(s)	92, 140, 159, 168, 283, 297, 1024
AspS9I	GGNCC	1 cut(s)	21
AsuC2I	CCSGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
AsuHPI	GGTGA	2 cut(s)	28, 1009
AsuII	TTCGAA	1 cut(s)	501
AvaI	CYCGRG	2 cut(s)	464, 506
AvaII	GGWCC	1 cut(s)	21
BaeI	ACNNNNGTAYC	2 cut(s)	494, 527
BanI	GGYRCC	1 cut(s)	1021
BanII	GRGCYC	1 cut(s)	36
BauI	CACGAG	1 cut(s)	290
BbrPI	CACGTG	2 cut(s)	213, 246
BbsI	GAAGAC	3 cut(s)	73, 399, 911
BbvI	GCAGC	1 cut(s)	242
BccI	CCATC	2 cut(s)	341, 994
BceAI	ACGGC	7 cut(s)	55, 62, 191, 295, 356, 805, 1069
BcnI	CCSGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
BcoDI	GTCTC	4 cut(s)	384, 703, 935, 977
BfaI	CTAG	1 cut(s)	317
BfoI	RGCGCY	1 cut(s)	1025
BfuAI	ACCTGC	2 cut(s)	65, 125
BglI	GCCNNNNNGGC	1 cut(s)	98
BisI	GCNGC	6 cut(s)	88, 204, 228, 231, 810, 813
BlpI	GCTNAGC	1 cut(s)	836
BlsI	GCNGC	6 cut(s)	89, 205, 229, 232, 811, 814
Bme1390I	CCNGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
Bme18I	GGWCC	1 cut(s)	21
BmeT110I	CYCGRG	2 cut(s)	464, 506
BmgT120I	GGNCC	1 cut(s)	21
BmiI	GGNNCC	6 cut(s)	23, 309, 558, 816, 822, 1023
BmrFI	CCNGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
BmsI	GCATC	1 cut(s)	436
BpiI	GAAGAC	3 cut(s)	73, 399, 911
BpmI	CTGGAG	1 cut(s)	517
Bpu1102I	GCTNAGC	1 cut(s)	836
Bpu14I	TTCGAA	1 cut(s)	501
BpuMI	CCSGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
BsaAI	YACGTR	2 cut(s)	213, 246
BsaHI	GRCGYC	6 cut(s)	225, 252, 369, 396, 1022, 1056
BsaI	GGTCTC	2 cut(s)	935, 977
BsaJI	CCNNGG	6 cut(s)	29, 303, 348, 464, 465, 1025
BsaWI	WCCGGW	1 cut(s)	559
BsaXI	ACNNNNNCTCC	2 cut(s)	248, 278
Bsc4I	CCNNNNNNNGG	4 cut(s)	30, 322, 487, 945
Bse118I	RCCGGY	2 cut(s)	14, 963
Bse1I	ACTGG	1 cut(s)	534
BseDI	CCNNGG	6 cut(s)	29, 303, 348, 464, 465, 1025
BseGI	GGATG	3 cut(s)	180, 258, 768
BseLI	CCNNNNNNNGG	4 cut(s)	30, 322, 487, 945
BseMII	CTCAG	2 cut(s)	827, 845
BseNI	ACTGG	1 cut(s)	534
BseRI	GAGGAG	1 cut(s)	576
BseX3I	CGGCCG	4 cut(s)	75, 204, 324, 947
BseXI	GCAGC	1 cut(s)	242
Bsh1236I	CGCG	9 cut(s)	90, 152, 157, 168, 281, 283, 297, 852, 971
Bsh1285I	CGRYCG	4 cut(s)	78, 207, 327, 950
BshFI	GGCC	8 cut(s)	77, 101, 206, 221, 326, 360, 949, 963
BshNI	GGYRCC	1 cut(s)	1021
BsiEI	CGRYCG	4 cut(s)	78, 207, 327, 950
BsiHKCI	CYCGRG	2 cut(s)	464, 506
BslFI	GGGAC	3 cut(s)	18, 284, 1046
BslI	CCNNNNNNNGG	4 cut(s)	30, 322, 487, 945
BsmAI	GTCTC	4 cut(s)	384, 703, 935, 977
BsmBI	CGTCTC	2 cut(s)	384, 703
BsmFI	GGGAC	3 cut(s)	18, 284, 1046
BsnI	GGCC	8 cut(s)	77, 101, 206, 221, 326, 360, 949, 963
Bso31I	GGTCTC	2 cut(s)	935, 977
BsoBI	CYCGRG	2 cut(s)	464, 506
Bsp119I	TTCGAA	1 cut(s)	501
Bsp1286I	GDGCHC	1 cut(s)	36
Bsp143I	GATC	5 cut(s)	129, 522, 847, 1003, 1008
Bsp1720I	GCTNAGC	1 cut(s)	836
Bsp68I	TCGCGA	2 cut(s)	852, 971
BspACI	CCGC	9 cut(s)	88, 203, 228, 267, 809, 812, 840, 892, 1040
BspANI	GGCC	8 cut(s)	77, 101, 206, 221, 326, 360, 949, 963
BspCNI	CTCAG	2 cut(s)	828, 844
BspFNI	CGCG	9 cut(s)	90, 152, 157, 168, 281, 283, 297, 852, 971
BspHI	TCATGA	1 cut(s)	613
BspLI	GGNNCC	6 cut(s)	23, 309, 558, 816, 822, 1023
BspMI	ACCTGC	2 cut(s)	65, 125
BspPI	GGATC	5 cut(s)	124, 517, 855, 1011, 1016
BspT104I	TTCGAA	1 cut(s)	501
BspT107I	GGYRCC	1 cut(s)	1021
BspTNI	GGTCTC	2 cut(s)	935, 977
BsrBI	CCGCTC	1 cut(s)	840
BsrFI	RCCGGY	2 cut(s)	14, 963
BsrI	ACTGG	1 cut(s)	534
BssAI	RCCGGY	2 cut(s)	14, 963
BssECI	CCNNGG	6 cut(s)	29, 303, 348, 464, 465, 1025
BssMI	GATC	5 cut(s)	129, 522, 847, 1003, 1008
BssNI	GRCGYC	6 cut(s)	225, 252, 369, 396, 1022, 1056
BssSI	CACGAG	1 cut(s)	290
Bst2BI	CACGAG	1 cut(s)	290
Bst6I	CTCTTC	2 cut(s)	661, 875
BstACI	GRCGYC	6 cut(s)	225, 252, 369, 396, 1022, 1056
BstBAI	YACGTR	2 cut(s)	213, 246
BstBI	TTCGAA	1 cut(s)	501
BstC8I	GCNNGC	3 cut(s)	191, 195, 358
BstDEI	CTNAG	3 cut(s)	712, 831, 836
BstDSI	CCRYGG	1 cut(s)	303
BstF5I	GGATG	3 cut(s)	180, 258, 768
BstFNI	CGCG	9 cut(s)	90, 152, 157, 168, 281, 283, 297, 852, 971
BstH2I	RGCGCY	1 cut(s)	1025
BstHHI	GCGC	7 cut(s)	92, 140, 159, 168, 283, 297, 1024
BstKTI	GATC	5 cut(s)	132, 525, 850, 1006, 1011
BstMAI	GTCTC	4 cut(s)	384, 703, 935, 977
BstMBI	GATC	5 cut(s)	129, 522, 847, 1003, 1008
BstMCI	CGRYCG	4 cut(s)	78, 207, 327, 950
BstSCI	CCNGG	7 cut(s)	28, 463, 464, 480, 923, 944, 1024
BstUI	CGCG	9 cut(s)	90, 152, 157, 168, 281, 283, 297, 852, 971
BstV1I	GCAGC	1 cut(s)	242
BstV2I	GAAGAC	3 cut(s)	73, 399, 911
BstX2I	RGATCY	2 cut(s)	129, 1008
BstYI	RGATCY	2 cut(s)	129, 1008
BstZI	CGGCCG	4 cut(s)	75, 204, 324, 947
BsuRI	GGCC	8 cut(s)	77, 101, 206, 221, 326, 360, 949, 963
BtgI	CCRYGG	1 cut(s)	303
BtsCI	GGATG	3 cut(s)	180, 258, 768
BtsI	GCAGTG	1 cut(s)	133
BtsIMutI	CAGTG	1 cut(s)	133
BtuMI	TCGCGA	2 cut(s)	852, 971
BveI	ACCTGC	2 cut(s)	65, 125
Cac8I	GCNNGC	3 cut(s)	191, 195, 358
CciI	TCATGA	1 cut(s)	613
CfoI	GCGC	7 cut(s)	92, 140, 159, 168, 283, 297, 1024
Cfr10I	RCCGGY	2 cut(s)	14, 963
Cfr13I	GGNCC	1 cut(s)	21
Cfr9I	CCCGGG	1 cut(s)	464
Csp6I	GTAC	2 cut(s)	511, 871
CspCI	CAANNNNNGTGG	2 cut(s)	334, 369
CviAII	CATG	1 cut(s)	614
CviQI	GTAC	2 cut(s)	511, 871
DdeI	CTNAG	3 cut(s)	712, 831, 836
DinI	GGCGCC	1 cut(s)	1023
DpnI	GATC	5 cut(s)	131, 524, 849, 1005, 1010
DpnII	GATC	5 cut(s)	129, 522, 847, 1003, 1008
EaeI	YGGCCR	4 cut(s)	75, 204, 324, 947
EagI	CGGCCG	4 cut(s)	75, 204, 324, 947
Eam1104I	CTCTTC	2 cut(s)	661, 875
EarI	CTCTTC	2 cut(s)	661, 875
EciI	GGCGGA	1 cut(s)	256
EclXI	CGGCCG	4 cut(s)	75, 204, 324, 947
Eco24I	GRGCYC	1 cut(s)	36
Eco31I	GGTCTC	2 cut(s)	935, 977
Eco47I	GGWCC	1 cut(s)	21
Eco52I	CGGCCG	4 cut(s)	75, 204, 324, 947
Eco57I	CTGAAG	1 cut(s)	649
Eco72I	CACGTG	2 cut(s)	213, 246
Eco88I	CYCGRG	2 cut(s)	464, 506
EcoT38I	GRGCYC	1 cut(s)	36
EgeI	GGCGCC	1 cut(s)	1023
EheI	GGCGCC	1 cut(s)	1023
Esp3I	CGTCTC	2 cut(s)	384, 703
FaeI	CATG	1 cut(s)	617
FaiI	YATR	6 cut(s)	473, 545, 615, 760, 936, 1035
FaqI	GGGAC	3 cut(s)	18, 284, 1046
FatI	CATG	1 cut(s)	613
Fnu4HI	GCNGC	6 cut(s)	88, 204, 228, 231, 810, 813
FokI	GGATG	3 cut(s)	187, 245, 755
FriOI	GRGCYC	1 cut(s)	36
Fsp4HI	GCNGC	6 cut(s)	88, 204, 228, 231, 810, 813
FspBI	CTAG	1 cut(s)	317
GlaI	GCGC	7 cut(s)	91, 139, 158, 167, 282, 296, 1023
GluI	GCNGC	6 cut(s)	88, 204, 228, 231, 810, 813
GsuI	CTGGAG	1 cut(s)	517
HaeII	RGCGCY	1 cut(s)	1025
HaeIII	GGCC	8 cut(s)	77, 101, 206, 221, 326, 360, 949, 963
HhaI	GCGC	7 cut(s)	92, 140, 159, 168, 283, 297, 1024
Hin1I	GRCGYC	6 cut(s)	225, 252, 369, 396, 1022, 1056
Hin1II	CATG	1 cut(s)	617
Hin6I	GCGC	7 cut(s)	90, 138, 157, 166, 281, 295, 1022
HinP1I	GCGC	7 cut(s)	90, 138, 157, 166, 281, 295, 1022
HphI	GGTGA	2 cut(s)	28, 1009
Hpy166II	GTNNAC	2 cut(s)	598, 781
Hpy188I	TCNGA	4 cut(s)	751, 773, 914, 1008
Hpy188III	TCNNGA	8 cut(s)	290, 452, 614, 731, 851, 901, 970, 1063
Hpy8I	GTNNAC	2 cut(s)	598, 781
HpyAV	CCTTC	1 cut(s)	673
HpyCH4IV	ACGT	4 cut(s)	212, 245, 777, 1067
HpyCH4V	TGCA	2 cut(s)	60, 216
HpyF3I	CTNAG	3 cut(s)	712, 831, 836
HpySE526I	ACGT	4 cut(s)	212, 245, 777, 1067
Hsp92I	GRCGYC	6 cut(s)	225, 252, 369, 396, 1022, 1056
Hsp92II	CATG	1 cut(s)	617
HspAI	GCGC	7 cut(s)	90, 138, 157, 166, 281, 295, 1022
KasI	GGCGCC	1 cut(s)	1021
Kzo9I	GATC	5 cut(s)	129, 522, 847, 1003, 1008
LmnI	GCTCC	5 cut(s)	202, 307, 437, 820, 826
Lsp1109I	GCAGC	1 cut(s)	242
LweI	GCATC	1 cut(s)	436
MaeI	CTAG	1 cut(s)	317
MaeII	ACGT	4 cut(s)	212, 245, 777, 1067
MaeIII	GTNAC	3 cut(s)	208, 241, 287
MalI	GATC	5 cut(s)	131, 524, 849, 1005, 1010
MbiI	CCGCTC	1 cut(s)	840
MboI	GATC	5 cut(s)	129, 522, 847, 1003, 1008
MboII	GAAGA	7 cut(s)	73, 404, 469, 648, 892, 898, 916
MflI	RGATCY	2 cut(s)	129, 1008
MhlI	GDGCHC	1 cut(s)	36
MluCI	AATT	3 cut(s)	424, 619, 739
Mly113I	GGCGCC	1 cut(s)	1022
MlyI	GAGTC	5 cut(s)	89, 116, 314, 338, 823
MmeI	TCCRAC	1 cut(s)	774
MseI	TTAA	2 cut(s)	384, 1014
MslI	CAYNNNNRTG	1 cut(s)	612
MspA1I	CMGCKG	1 cut(s)	835
MspR9I	CCNGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
MvnI	CGCG	9 cut(s)	90, 152, 157, 168, 281, 283, 297, 852, 971
NarI	GGCGCC	1 cut(s)	1022
NciI	CCSGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
NdeII	GATC	5 cut(s)	129, 522, 847, 1003, 1008
NlaIII	CATG	1 cut(s)	617
NlaIV	GGNNCC	6 cut(s)	23, 309, 558, 816, 822, 1023
NmeAIII	GCCGAG	6 cut(s)	77, 302, 352, 964, 975, 998
NmuCI	GTSAC	3 cut(s)	208, 241, 287
NruI	TCGCGA	2 cut(s)	852, 971
NspV	TTCGAA	1 cut(s)	501
PaeR7I	CTCGAG	1 cut(s)	506
PagI	TCATGA	1 cut(s)	613
PaqCI	CACCTGC	1 cut(s)	65
PfeI	GAWTC	6 cut(s)	401, 412, 491, 577, 797, 954
PfoI	TCCNGGA	2 cut(s)	480, 923
PkrI	GCNGC	6 cut(s)	89, 205, 229, 232, 811, 814
PleI	GAGTC	5 cut(s)	89, 116, 314, 337, 823
PluTI	GGCGCC	1 cut(s)	1025
PmaCI	CACGTG	2 cut(s)	213, 246
PmlI	CACGTG	2 cut(s)	213, 246
PpsI	GAGTC	5 cut(s)	89, 116, 314, 337, 823
Ppu21I	YACGTR	2 cut(s)	213, 246
PspCI	CACGTG	2 cut(s)	213, 246
PspN4I	GGNNCC	6 cut(s)	23, 309, 558, 816, 822, 1023
PspPI	GGNCC	1 cut(s)	21
PspXI	VCTCGAGB	1 cut(s)	506
PsuI	RGATCY	2 cut(s)	129, 1008
PvuII	CAGCTG	1 cut(s)	835
RruI	TCGCGA	2 cut(s)	852, 971
RsaI	GTAC	2 cut(s)	512, 872
RsaNI	GTAC	2 cut(s)	511, 871
RseI	CAYNNNNRTG	1 cut(s)	612
SaqAI	TTAA	2 cut(s)	384, 1014
SatI	GCNGC	6 cut(s)	88, 204, 228, 231, 810, 813
Sau3AI	GATC	5 cut(s)	129, 522, 847, 1003, 1008
Sau96I	GGNCC	1 cut(s)	21
SchI	GAGTC	5 cut(s)	89, 116, 314, 338, 823
ScrFI	CCNGG	7 cut(s)	30, 465, 466, 482, 925, 946, 1026
SduI	GDGCHC	1 cut(s)	36
SfaNI	GCATC	1 cut(s)	436
SfoI	GGCGCC	1 cut(s)	1023
Sfr274I	CTCGAG	1 cut(s)	506
SfuI	TTCGAA	1 cut(s)	501
SinI	GGWCC	1 cut(s)	21
SlaI	CTCGAG	1 cut(s)	506
SmaI	CCCGGG	1 cut(s)	466
SmiMI	CAYNNNNRTG	1 cut(s)	612
SmlI	CTYRAG	1 cut(s)	506
SmoI	CTYRAG	1 cut(s)	506
Sse9I	AATT	3 cut(s)	424, 619, 739
SsiI	CCGC	9 cut(s)	88, 203, 228, 267, 809, 812, 840, 892, 1040
SspDI	GGCGCC	1 cut(s)	1021
SspMI	CTAG	1 cut(s)	317
StyD4I	CCNGG	7 cut(s)	28, 463, 464, 480, 923, 944, 1024
TaiI	ACGT	4 cut(s)	215, 248, 780, 1070
TaqI	TCGA	4 cut(s)	453, 501, 507, 627
TaqII	GACCGA	1 cut(s)	1001
TasI	AATT	3 cut(s)	424, 619, 739
TauI	GCSGC	5 cut(s)	90, 206, 230, 812, 815
TfiI	GAWTC	6 cut(s)	401, 412, 491, 577, 797, 954
Tru1I	TTAA	2 cut(s)	384, 1014
Tru9I	TTAA	2 cut(s)	384, 1014
TscAI	CASTG	1 cut(s)	140
TseFI	GTSAC	3 cut(s)	208, 241, 287
TseI	GCWGC	1 cut(s)	230
Tsp45I	GTSAC	3 cut(s)	208, 241, 287
TspDTI	ATGAA	5 cut(s)	430, 630, 732, 747, 757
TspGWI	ACGGA	3 cut(s)	750, 753, 1007
TspMI	CCCGGG	1 cut(s)	464
TspRI	CASTG	1 cut(s)	140
VpaK11BI	GGWCC	1 cut(s)	21
XapI	RAATTY	2 cut(s)	424, 739
XcmI	CCANNNNNNNNNTGG	1 cut(s)	541
XhoI	CTCGAG	1 cut(s)	506
XmaI	CCCGGG	1 cut(s)	464
XspI	CTAG	1 cut(s)	317

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.