translocase of chloroplast 159
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g18070 |
| malus_domestica | MD16G1168600.v1.1 |
| prunus_persica | Prupe.1G136400_v2.0.a1 |
| pyrus_communis | pycom16g14200 |
| rosa_chinensis | RchiOBHm_Chr4g0422301 |
| rosa_laevigata | RLG00000007622 |
| rosa_multiflora | Rmu_sc0013245.1_g000017 Rmu_sc0019605.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00364390 |
| rosa_rugosa | Rorug04G0179100 |
| rosa_samantha | Rh4AG238400 Rh4BG241500 Rh4CG253400 Rh4DG237100 Rh4DG237200 |
| rosa_wichuraiana | Rw4G020630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 2 cut(s) | 74, 622 |
| AciI | CCGC | 1 cut(s) | 1207 |
| AclWI | GGATC | 1 cut(s) | 1770 |
| AcsI | RAATTY | 7 cut(s) | 143, 892, 935, 1040, 1524, 1681, 2057 |
| AcyI | GRCGYC | 1 cut(s) | 254 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 286, 343, 1291, 2126 |
| AjnI | CCWGG | 2 cut(s) | 46, 1159 |
| AleI | CACNNNNGTG | 1 cut(s) | 1391 |
| Alw21I | GWGCWC | 4 cut(s) | 71, 106, 1813, 2071 |
| Alw26I | GTCTC | 4 cut(s) | 731, 1086, 1865, 1917 |
| Alw44I | GTGCAC | 1 cut(s) | 2067 |
| AlwI | GGATC | 1 cut(s) | 1770 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 1493 |
| AoxI | GGCC | 7 cut(s) | 222, 263, 345, 862, 1196, 1282, 1383 |
| ApaLI | GTGCAC | 1 cut(s) | 2067 |
| ApeKI | GCWGC | 5 cut(s) | 1204, 1334, 1337, 1703, 2093 |
| ApoI | RAATTY | 7 cut(s) | 143, 892, 935, 1040, 1524, 1681, 2057 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 877, 909 |
| AseI | ATTAAT | 1 cut(s) | 771 |
| AspLEI | GCGC | 1 cut(s) | 526 |
| AspS9I | GGNCC | 2 cut(s) | 1196, 1891 |
| AsuHPI | GGTGA | 4 cut(s) | 509, 713, 1735, 1838 |
| AvaII | GGWCC | 1 cut(s) | 1891 |
| BaeGI | GKGCMC | 1 cut(s) | 2071 |
| BanII | GRGCYC | 3 cut(s) | 71, 106, 1813 |
| Bbv12I | GWGCWC | 4 cut(s) | 71, 106, 1813, 2071 |
| BbvCI | CCTCAGC | 1 cut(s) | 756 |
| BbvI | GCAGC | 5 cut(s) | 1191, 1321, 1324, 1690, 2105 |
| BccI | CCATC | 1 cut(s) | 1688 |
| BceAI | ACGGC | 1 cut(s) | 267 |
| BciT130I | CCWGG | 2 cut(s) | 48, 1161 |
| BclI | TGATCA | 2 cut(s) | 694, 1620 |
| BcoDI | GTCTC | 4 cut(s) | 731, 1086, 1865, 1917 |
| BfaI | CTAG | 3 cut(s) | 1449, 1707, 2121 |
| BfmI | CTRYAG | 3 cut(s) | 1104, 1338, 1814 |
| BfuAI | ACCTGC | 2 cut(s) | 74, 622 |
| BisI | GCNGC | 5 cut(s) | 1205, 1335, 1338, 1704, 2094 |
| BlsI | GCNGC | 5 cut(s) | 1206, 1336, 1339, 1705, 2095 |
| Bme1390I | CCNGG | 2 cut(s) | 48, 1161 |
| Bme18I | GGWCC | 1 cut(s) | 1891 |
| BmgT120I | GGNCC | 2 cut(s) | 1196, 1891 |
| BmiI | GGNNCC | 2 cut(s) | 1066, 1843 |
| BmrFI | CCNGG | 2 cut(s) | 48, 1161 |
| BmrI | ACTGGG | 2 cut(s) | 243, 421 |
| BmsI | GCATC | 1 cut(s) | 385 |
| BmuI | ACTGGG | 2 cut(s) | 243, 421 |
| BpmI | CTGGAG | 3 cut(s) | 1182, 1584, 1827 |
| Bpu10I | CCTNAGC | 1 cut(s) | 756 |
| BpuEI | CTTGAG | 4 cut(s) | 887, 1070, 1736, 1847 |
| BsaAI | YACGTR | 1 cut(s) | 1389 |
| BsaBI | GATNNNNATC | 2 cut(s) | 693, 1326 |
| BsaHI | GRCGYC | 1 cut(s) | 254 |
| BsaWI | WCCGGW | 1 cut(s) | 1745 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 1056, 1086, 1155, 1185 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 286, 343, 1291, 2126 |
| Bse1I | ACTGG | 5 cut(s) | 238, 427, 1199, 1473, 1903 |
| Bse3DI | GCAATG | 2 cut(s) | 420, 826 |
| Bse8I | GATNNNNATC | 2 cut(s) | 693, 1326 |
| BseBI | CCWGG | 2 cut(s) | 48, 1161 |
| BseGI | GGATG | 3 cut(s) | 397, 934, 1102 |
| BseJI | GATNNNNATC | 2 cut(s) | 693, 1326 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 286, 343, 1291, 2126 |
| BseMI | GCAATG | 2 cut(s) | 420, 826 |
| BseMII | CTCAG | 5 cut(s) | 204, 210, 534, 747, 906 |
| BseNI | ACTGG | 5 cut(s) | 238, 427, 1199, 1473, 1903 |
| BseRI | GAGGAG | 4 cut(s) | 96, 254, 773, 803 |
| BseSI | GKGCMC | 1 cut(s) | 2071 |
| BseXI | GCAGC | 5 cut(s) | 1191, 1321, 1324, 1690, 2105 |
| BshFI | GGCC | 7 cut(s) | 224, 265, 347, 864, 1198, 1284, 1385 |
| BsiHKAI | GWGCWC | 4 cut(s) | 71, 106, 1813, 2071 |
| BsiSI | CCGG | 1 cut(s) | 1746 |
| BslFI | GGGAC | 3 cut(s) | 55, 1085, 1448 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 286, 343, 1291, 2126 |
| BsmAI | GTCTC | 4 cut(s) | 731, 1086, 1865, 1917 |
| BsmBI | CGTCTC | 1 cut(s) | 1865 |
| BsmFI | GGGAC | 3 cut(s) | 55, 1085, 1448 |
| BsmI | GAATGC | 1 cut(s) | 1483 |
| BsnI | GGCC | 7 cut(s) | 224, 265, 347, 864, 1198, 1284, 1385 |
| Bsp1286I | GDGCHC | 4 cut(s) | 71, 106, 1813, 2071 |
| Bsp143I | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| BspACI | CCGC | 1 cut(s) | 1207 |
| BspANI | GGCC | 7 cut(s) | 224, 265, 347, 864, 1198, 1284, 1385 |
| BspCNI | CTCAG | 5 cut(s) | 205, 211, 535, 748, 907 |
| BspHI | TCATGA | 1 cut(s) | 154 |
| BspLI | GGNNCC | 2 cut(s) | 1066, 1843 |
| BspMAI | CTGCAG | 3 cut(s) | 1108, 1342, 1818 |
| BspMI | ACCTGC | 2 cut(s) | 74, 622 |
| BspPI | GGATC | 1 cut(s) | 1770 |
| BspQI | GCTCTTC | 1 cut(s) | 579 |
| BsrDI | GCAATG | 2 cut(s) | 420, 826 |
| BsrI | ACTGG | 5 cut(s) | 238, 427, 1199, 1473, 1903 |
| BssMI | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| BssNI | GRCGYC | 1 cut(s) | 254 |
| Bst2UI | CCWGG | 2 cut(s) | 48, 1161 |
| Bst4CI | ACNGT | 7 cut(s) | 152, 951, 1233, 1259, 1439, 1599, 1717 |
| Bst6I | CTCTTC | 5 cut(s) | 96, 465, 579, 780, 807 |
| BstACI | GRCGYC | 1 cut(s) | 254 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1025 |
| BstBAI | YACGTR | 1 cut(s) | 1389 |
| BstC8I | GCNNGC | 1 cut(s) | 57 |
| BstDEI | CTNAG | 6 cut(s) | 213, 219, 543, 756, 915, 924 |
| BstEII | GGTNACC | 1 cut(s) | 1741 |
| BstF5I | GGATG | 3 cut(s) | 397, 934, 1102 |
| BstHHI | GCGC | 1 cut(s) | 526 |
| BstKTI | GATC | 5 cut(s) | 697, 1330, 1347, 1623, 1765 |
| BstMAI | GTCTC | 4 cut(s) | 731, 1086, 1865, 1917 |
| BstMBI | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 837, 1025, 1204, 1802, 1841 |
| BstNI | CCWGG | 2 cut(s) | 48, 1161 |
| BstPI | GGTNACC | 1 cut(s) | 1741 |
| BstSCI | CCNGG | 2 cut(s) | 46, 1159 |
| BstSFI | CTRYAG | 3 cut(s) | 1104, 1338, 1814 |
| BstSLI | GKGCMC | 1 cut(s) | 2071 |
| BstV1I | GCAGC | 5 cut(s) | 1191, 1321, 1324, 1690, 2105 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 805, 1393 |
| BsuRI | GGCC | 7 cut(s) | 224, 265, 347, 864, 1198, 1284, 1385 |
| BtsCI | GGATG | 3 cut(s) | 397, 934, 1102 |
| BtsI | GCAGTG | 1 cut(s) | 579 |
| BtsIMutI | CAGTG | 5 cut(s) | 579, 947, 1206, 1466, 1595 |
| BveI | ACCTGC | 2 cut(s) | 74, 622 |
| Cac8I | GCNNGC | 1 cut(s) | 57 |
| CaiI | CAGNNNCTG | 1 cut(s) | 1493 |
| CciI | TCATGA | 1 cut(s) | 154 |
| CfoI | GCGC | 1 cut(s) | 526 |
| Cfr13I | GGNCC | 2 cut(s) | 1196, 1891 |
| CseI | GACGC | 2 cut(s) | 243, 1847 |
| CsiI | ACCWGGT | 1 cut(s) | 46 |
| CviAII | CATG | 5 cut(s) | 17, 155, 435, 1838, 1997 |
| DdeI | CTNAG | 6 cut(s) | 213, 219, 543, 756, 915, 924 |
| DpnI | GATC | 5 cut(s) | 696, 1329, 1346, 1622, 1764 |
| DpnII | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| DraI | TTTAAA | 1 cut(s) | 1279 |
| Eam1104I | CTCTTC | 5 cut(s) | 96, 465, 579, 780, 807 |
| EarI | CTCTTC | 5 cut(s) | 96, 465, 579, 780, 807 |
| Ecl136II | GAGCTC | 3 cut(s) | 69, 104, 1811 |
| Eco147I | AGGCCT | 2 cut(s) | 224, 864 |
| Eco24I | GRGCYC | 3 cut(s) | 71, 106, 1813 |
| Eco47I | GGWCC | 1 cut(s) | 1891 |
| Eco53kI | GAGCTC | 3 cut(s) | 69, 104, 1811 |
| Eco91I | GGTNACC | 1 cut(s) | 1741 |
| EcoICRI | GAGCTC | 3 cut(s) | 69, 104, 1811 |
| EcoO65I | GGTNACC | 1 cut(s) | 1741 |
| EcoRI | GAATTC | 1 cut(s) | 143 |
| EcoRII | CCWGG | 2 cut(s) | 46, 1159 |
| EcoT22I | ATGCAT | 1 cut(s) | 1485 |
| EcoT38I | GRGCYC | 3 cut(s) | 71, 106, 1813 |
| Esp3I | CGTCTC | 1 cut(s) | 1865 |
| FaeI | CATG | 5 cut(s) | 20, 158, 438, 1841, 2000 |
| FaqI | GGGAC | 3 cut(s) | 55, 1085, 1448 |
| FatI | CATG | 5 cut(s) | 16, 154, 434, 1837, 1996 |
| FbaI | TGATCA | 2 cut(s) | 694, 1620 |
| Fnu4HI | GCNGC | 5 cut(s) | 1205, 1335, 1338, 1704, 2094 |
| FokI | GGATG | 3 cut(s) | 404, 941, 1109 |
| FriOI | GRGCYC | 3 cut(s) | 71, 106, 1813 |
| Fsp4HI | GCNGC | 5 cut(s) | 1205, 1335, 1338, 1704, 2094 |
| FspBI | CTAG | 3 cut(s) | 1449, 1707, 2121 |
| GlaI | GCGC | 1 cut(s) | 525 |
| GluI | GCNGC | 5 cut(s) | 1205, 1335, 1338, 1704, 2094 |
| GsuI | CTGGAG | 3 cut(s) | 1182, 1584, 1827 |
| HaeIII | GGCC | 7 cut(s) | 224, 265, 347, 864, 1198, 1284, 1385 |
| HapII | CCGG | 1 cut(s) | 1746 |
| HgaI | GACGC | 2 cut(s) | 243, 1847 |
| HhaI | GCGC | 1 cut(s) | 526 |
| Hin1I | GRCGYC | 1 cut(s) | 254 |
| Hin1II | CATG | 5 cut(s) | 20, 158, 438, 1841, 2000 |
| Hin6I | GCGC | 1 cut(s) | 524 |
| HinP1I | GCGC | 1 cut(s) | 524 |
| HpaII | CCGG | 1 cut(s) | 1746 |
| HphI | GGTGA | 4 cut(s) | 509, 713, 1735, 1838 |
| Hpy166II | GTNNAC | 1 cut(s) | 2069 |
| Hpy188III | TCNNGA | 8 cut(s) | 116, 155, 296, 1488, 1529, 1563, 1753, 1864 |
| Hpy8I | GTNNAC | 1 cut(s) | 2069 |
| Hpy99I | CGWCG | 1 cut(s) | 259 |
| HpyCH4III | ACNGT | 7 cut(s) | 152, 951, 1233, 1259, 1439, 1599, 1717 |
| HpyCH4IV | ACGT | 1 cut(s) | 1388 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 837, 1025, 1204, 1802, 1841 |
| HpyF3I | CTNAG | 6 cut(s) | 213, 219, 543, 756, 915, 924 |
| HpySE526I | ACGT | 1 cut(s) | 1388 |
| Hsp92I | GRCGYC | 1 cut(s) | 254 |
| Hsp92II | CATG | 5 cut(s) | 20, 158, 438, 1841, 2000 |
| HspAI | GCGC | 1 cut(s) | 524 |
| Ksp22I | TGATCA | 2 cut(s) | 694, 1620 |
| Kzo9I | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| LguI | GCTCTTC | 1 cut(s) | 579 |
| LmnI | GCTCC | 6 cut(s) | 109, 873, 1064, 1565, 1808, 1841 |
| Lsp1109I | GCAGC | 5 cut(s) | 1191, 1321, 1324, 1690, 2105 |
| LweI | GCATC | 1 cut(s) | 385 |
| MabI | ACCWGGT | 1 cut(s) | 46 |
| MaeI | CTAG | 3 cut(s) | 1449, 1707, 2121 |
| MaeII | ACGT | 1 cut(s) | 1388 |
| MaeIII | GTNAC | 7 cut(s) | 229, 305, 973, 994, 1639, 1717, 1741 |
| MalI | GATC | 5 cut(s) | 696, 1329, 1346, 1622, 1764 |
| MboI | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| MhlI | GDGCHC | 4 cut(s) | 71, 106, 1813, 2071 |
| MlyI | GAGTC | 6 cut(s) | 125, 224, 302, 824, 1223, 1743 |
| MmeI | TCCRAC | 2 cut(s) | 237, 1954 |
| Mph1103I | ATGCAT | 1 cut(s) | 1485 |
| MseI | TTAA | 8 cut(s) | 534, 771, 966, 1227, 1278, 1359, 1614, 1712 |
| MslI | CAYNNNNRTG | 2 cut(s) | 1391, 1728 |
| MspA1I | CMGCKG | 1 cut(s) | 1703 |
| MspI | CCGG | 1 cut(s) | 1746 |
| MspR9I | CCNGG | 2 cut(s) | 48, 1161 |
| Mva1269I | GAATGC | 1 cut(s) | 1483 |
| MvaI | CCWGG | 2 cut(s) | 48, 1161 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 837, 1025, 1204, 1802, 1841 |
| NdeII | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| NlaIII | CATG | 5 cut(s) | 20, 158, 438, 1841, 2000 |
| NlaIV | GGNNCC | 2 cut(s) | 1066, 1843 |
| NmeAIII | GCCGAG | 1 cut(s) | 552 |
| NmuCI | GTSAC | 5 cut(s) | 229, 305, 973, 1639, 1741 |
| NsiI | ATGCAT | 1 cut(s) | 1485 |
| OliI | CACNNNNGTG | 1 cut(s) | 1391 |
| PagI | TCATGA | 1 cut(s) | 154 |
| PceI | AGGCCT | 2 cut(s) | 224, 864 |
| PciSI | GCTCTTC | 1 cut(s) | 579 |
| PctI | GAATGC | 1 cut(s) | 1483 |
| PfeI | GAWTC | 7 cut(s) | 5, 119, 125, 137, 689, 1295, 1403 |
| PkrI | GCNGC | 5 cut(s) | 1206, 1336, 1339, 1705, 2095 |
| PleI | GAGTC | 6 cut(s) | 125, 223, 302, 823, 1222, 1743 |
| PpsI | GAGTC | 6 cut(s) | 125, 223, 302, 823, 1222, 1743 |
| Ppu21I | YACGTR | 1 cut(s) | 1389 |
| PshBI | ATTAAT | 1 cut(s) | 771 |
| Psp124BI | GAGCTC | 3 cut(s) | 71, 106, 1813 |
| Psp6I | CCWGG | 2 cut(s) | 46, 1159 |
| PspEI | GGTNACC | 1 cut(s) | 1741 |
| PspGI | CCWGG | 2 cut(s) | 46, 1159 |
| PspN4I | GGNNCC | 2 cut(s) | 1066, 1843 |
| PspPI | GGNCC | 2 cut(s) | 1196, 1891 |
| PstI | CTGCAG | 3 cut(s) | 1108, 1342, 1818 |
| PstNI | CAGNNNCTG | 1 cut(s) | 1493 |
| PvuII | CAGCTG | 1 cut(s) | 1703 |
| RseI | CAYNNNNRTG | 2 cut(s) | 1391, 1728 |
| SacI | GAGCTC | 3 cut(s) | 71, 106, 1813 |
| SapI | GCTCTTC | 1 cut(s) | 579 |
| SaqAI | TTAA | 8 cut(s) | 534, 771, 966, 1227, 1278, 1359, 1614, 1712 |
| SatI | GCNGC | 5 cut(s) | 1205, 1335, 1338, 1704, 2094 |
| Sau3AI | GATC | 5 cut(s) | 694, 1327, 1344, 1620, 1762 |
| Sau96I | GGNCC | 2 cut(s) | 1196, 1891 |
| SchI | GAGTC | 6 cut(s) | 125, 224, 302, 824, 1223, 1743 |
| ScrFI | CCNGG | 2 cut(s) | 48, 1161 |
| SduI | GDGCHC | 4 cut(s) | 71, 106, 1813, 2071 |
| SexAI | ACCWGGT | 1 cut(s) | 46 |
| SfaNI | GCATC | 1 cut(s) | 385 |
| SfcI | CTRYAG | 3 cut(s) | 1104, 1338, 1814 |
| SinI | GGWCC | 1 cut(s) | 1891 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 1391, 1728 |
| SmlI | CTYRAG | 4 cut(s) | 866, 1085, 1751, 1862 |
| SmoI | CTYRAG | 4 cut(s) | 866, 1085, 1751, 1862 |
| SseBI | AGGCCT | 2 cut(s) | 224, 864 |
| SsiI | CCGC | 1 cut(s) | 1207 |
| SspI | AATATT | 2 cut(s) | 184, 1147 |
| SspMI | CTAG | 3 cut(s) | 1449, 1707, 2121 |
| SstI | GAGCTC | 3 cut(s) | 71, 106, 1813 |
| StuI | AGGCCT | 2 cut(s) | 224, 864 |
| StyD4I | CCNGG | 2 cut(s) | 46, 1159 |
| TaaI | ACNGT | 7 cut(s) | 152, 951, 1233, 1259, 1439, 1599, 1717 |
| TaiI | ACGT | 1 cut(s) | 1391 |
| TaqI | TCGA | 2 cut(s) | 375, 2141 |
| TfiI | GAWTC | 7 cut(s) | 5, 119, 125, 137, 689, 1295, 1403 |
| Tru1I | TTAA | 8 cut(s) | 534, 771, 966, 1227, 1278, 1359, 1614, 1712 |
| Tru9I | TTAA | 8 cut(s) | 534, 771, 966, 1227, 1278, 1359, 1614, 1712 |
| TscAI | CASTG | 5 cut(s) | 579, 954, 1206, 1473, 1602 |
| TseFI | GTSAC | 5 cut(s) | 229, 305, 973, 1639, 1741 |
| TseI | GCWGC | 5 cut(s) | 1204, 1334, 1337, 1703, 2093 |
| Tsp45I | GTSAC | 5 cut(s) | 229, 305, 973, 1639, 1741 |
| TspDTI | ATGAA | 5 cut(s) | 759, 1530, 1934, 1985, 2076 |
| TspGWI | ACGGA | 1 cut(s) | 2105 |
| TspRI | CASTG | 5 cut(s) | 579, 954, 1206, 1473, 1602 |
| VneI | GTGCAC | 1 cut(s) | 2067 |
| VpaK11BI | GGWCC | 1 cut(s) | 1891 |
| VspI | ATTAAT | 1 cut(s) | 771 |
| XapI | RAATTY | 7 cut(s) | 143, 892, 935, 1040, 1524, 1681, 2057 |
| XspI | CTAG | 3 cut(s) | 1449, 1707, 2121 |
| Zsp2I | ATGCAT | 1 cut(s) | 1485 |