Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0015598

Physical Location & Seq

Genomic Coordinates Reverse (-)

45625689 .. 45627866

Gene Structure 2178 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00364390.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2178 bp

ATGGACTCGTCAAAGCCTTATGTTCGACTCTCTGCAGCACAAGACAACTCAGGAGCTTGGAACCCACAACAGAAGCTTGCGGTTTCTAGTTCATCTTCACTTTCAGGTTCTCTTCCTATCCGAGCTCGTCTTACTCTAGATTCTGATTCTGACTCTGAAATCAACGGTGGTCATGAATTGGGTTATATTACTAGTAGTAGTAACATTAGTGTTGGTTCCGAGAGTGGGTTTGTGAGTGGGGAAGAGTTTGAAACGGCGTCAGAGAGGCCCTTTGTGGCGGTGGAGTCGGGTGAGGAAGCCCTTGAAGAGAGTGGCTCGGTTGAAAGATATGAGGTTTTTTGGCCTTCTGTGTCTGACCCAGATGAATATGATGAAGCTGTTGTGGGTAAAGTTATGGTGGGTGGTCCGAATCCGGAGGAGGTTAGGCCCATTGCAAATTTGTCATGGGAGAGTGATGGGAGTGAGGTAGTGGGTGAGGAGATTGAAGAAGAAGTGAGTGAAGATGAAGGTGATGGGTTGTTGGGTCATGTTAAGGCTCTGGTTTATGGGTTTGTGGAGCAGGTTGGTATTCCACCTAGAGTTAAGGTTTCTGAGGTTGAGGAAGGAGAAGAAGATGAGTCCTTGGATGTTAAAGAATCAAGTGTTGTTGAAGGTGGAAATGGAGATTCTGTTCAAGTGGAATGCGGTGAGGATTGTAGTTTTGATACTGCTGAGTCCAGTGAAACGAACTCTGTTGAGTTGAATTTGAATGTATTGGAAGGTGGAGAGAAAGATAAGCATGTTGAAGAAGAGTTCTTTGTGCATGAAAGTTCCGTGAAATTGGATGAATTGGATGTTGAGGGTAACGAGAATCTGAGTATGGGAAATAGTCATATATCTGAAGCTGAGGAAGATAAAGTTGAATATAGTGATTCCTTTAACTCAATCACACCAAGGTCTGTCTTAGGTGAGAATGTGGCCACTGAACTCGAGATTGAGGATCCGATTGCTAATGGGAAGGACTTGGTTTTTACTGGAGATGCTGGTGTGAAATTTGAAGGCAGTGAAGCCAAAGTGGAAGTCCCTCTCAAGGAGAAGAAGGGTTACATTATGGAACAGCACCCAACCAGCTTGGGTCTGTTTGTGGATAGTGTTGCATATGGGTTTCAGGTTTATGAGGTTGAAAAAGAAATAGAAGAAGAATACAAGTTAGTGATGGGGAAAGGCTCCTCCGATTCCTTCATGAAGCAGTCTGAGCCGGCCACAGAATTAAAGGGTGTTCAGAATTCAGACTTGAAAGCCATTGTTAAAAGTCAAACTGGGGAATCCATTCAAGCTGAATGGACTGAAGATAATGGTCTCGGTGGTGTGGAAACCAAGGAACCAGATATTTTGGAGAAAGCCAAGAGTATGGCAGAAGAGTCTATAATGCCTTCCCCAAAAAGCAAAACGAGTGATGTTGATATTAGCGAAAGTAATGGGGCATTGGACAGAGGAGTCCATTCAGAATGTGATTTTGATGTTGAGGGGAGTGGAAATCAGATAACGGACTCCAATTCATATTCACAGCCAAATCCAATTCTGAAGATCTTATATGTGAGTAAGCGCAATTTGTCTGAAGCTGCTGGGGGTGATGGATATGTACTGTGTTCTGATTTCCTTGAATCAATCACACCAAGTTCCAGTGTGACCCATGATCACATTTTTGGTGGTGAAACTAGGGTAAAAAATTGTAAAATAGGCAGAAGATTCGCTGGAGTAACCGTAACTCACTTGGGTGAGGATGCCACCACCGGACTCAAGATTGAGGATCAGATTGCTATTGGGAAGGGCTTGGTGATGGCTGGAAGTGCTGGAGCTGTGCAATGCCAAGGTGATATAGCATGTGGAGCCAAACTGGAATTGTGTCTCAAGAGGAAGAATTTCCCTATAAAGCAGGACCAAACTAGCTTGGGTCTGTCTTTGATGAAGTGGGGTGGTGGTCTTCTTGTAACAACCGATATACTGTCTCGGTTCTCTGTTGGAAGTTCTAAAATAGCTGTTCATGTTGTATTGGACAACAAGCAGAGGGGAAAGATTGCTATAAGAACCAGCAACTCCGATAAAATCCCAAGTGCAGGGATTATTGGGATTCTCTCAATTGCAGTTTCAGTCTTCGGGTTCTTCAGTTCAAGATTCGGTGTTCAGAACTCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

725

Amino Acids

77.75

Weight (kDa)

4.4

Isoelectric Point (pI)

43.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOC159_MAD	PF11886	561 - 711	7.7e-39	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0015598)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g18070
malus_domestica	MD16G1168600.v1.1
prunus_persica	Prupe.1G136400_v2.0.a1
pyrus_communis	pycom16g14200
rosa_chinensis	RchiOBHm_Chr4g0422301
rosa_laevigata	RLG00000007622
rosa_multiflora	Rmu_sc0013245.1_g000017 Rmu_sc0019605.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364390
rosa_rugosa	Rorug04G0179100
rosa_samantha	Rh4AG238400 Rh4BG241500 Rh4CG253400 Rh4DG237100 Rh4DG237200
rosa_wichuraiana	Rw4G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1475
Acc36I	ACCTGC	1 cut(s)	550
AccIII	TCCGGA	1 cut(s)	412
AciI	CCGC	3 cut(s)	80, 278, 684
AclWI	GGATC	3 cut(s)	974, 987, 1797
AcoI	YGGCCR	2 cut(s)	957, 1239
AcsI	RAATTY	5 cut(s)	436, 742, 1031, 1264, 1900
AcuI	CTGAAG	5 cut(s)	900, 1347, 1583, 1617, 2128
AcyI	GRCGYC	1 cut(s)	257
AfaI	GTAC	1 cut(s)	1623
AfiI	CCNNNNNNNGG	3 cut(s)	225, 1069, 2096
AhlI	ACTAGT	1 cut(s)	191
AleI	CACNNNNGTG	1 cut(s)	1755
AloI	GAACNNNNNNTCC	2 cut(s)	654, 686
Alw21I	GWGCWC	1 cut(s)	127
Alw26I	GTCTC	3 cut(s)	1343, 1892, 1992
AlwI	GGATC	3 cut(s)	974, 987, 1797
Ama87I	CYCGRG	1 cut(s)	968
Aor13HI	TCCGGA	1 cut(s)	412
AoxI	GGCC	5 cut(s)	266, 341, 425, 957, 1239
ApeKI	GCWGC	2 cut(s)	35, 1601
ApoI	RAATTY	5 cut(s)	436, 742, 1031, 1264, 1900
ArsI	GACNNNNNNTTYG	2 cut(s)	1044, 1076
Asp700I	GAANNNNTTC	2 cut(s)	1308, 1901
AspLEI	GCGC	1 cut(s)	1587
AspS9I	GGNCC	4 cut(s)	267, 404, 426, 1918
AvaI	CYCGRG	1 cut(s)	968
AvaII	GGWCC	2 cut(s)	404, 1918
BalI	TGGCCA	1 cut(s)	959
BamHI	GGATCC	1 cut(s)	979
BanII	GRGCYC	1 cut(s)	127
BarI	GAAGNNNNNNTAC	2 cut(s)	1067, 1099
BbsI	GAAGAC	2 cut(s)	1955, 2125
Bbv12I	GWGCWC	1 cut(s)	127
BbvCI	CCTCAGC	1 cut(s)	885
BbvI	GCAGC	2 cut(s)	47, 1588
BccI	CCATC	5 cut(s)	449, 506, 1189, 1607, 1813
BceAI	ACGGC	1 cut(s)	270
BcgI	CGANNNNNNTGC	2 cut(s)	1711, 1745
BclI	TGATCA	1 cut(s)	1675
BcoDI	GTCTC	3 cut(s)	1343, 1892, 1992
BcuI	ACTAGT	1 cut(s)	191
BfaI	CTAG	6 cut(s)	87, 137, 192, 576, 1698, 1926
BfmI	CTRYAG	1 cut(s)	33
BfuAI	ACCTGC	1 cut(s)	550
BglII	AGATCT	1 cut(s)	1566
BisI	GCNGC	2 cut(s)	36, 1602
BlsI	GCNGC	2 cut(s)	37, 1603
Bme18I	GGWCC	2 cut(s)	404, 1918
BmeT110I	CYCGRG	1 cut(s)	968
BmgT120I	GGNCC	4 cut(s)	267, 404, 426, 1918
BmiI	GGNNCC	6 cut(s)	62, 217, 981, 1207, 1362, 1870
BmrI	ACTGGG	1 cut(s)	1308
BmsI	GCATC	2 cut(s)	1009, 1753
BmuI	ACTGGG	1 cut(s)	1308
BpiI	GAAGAC	2 cut(s)	1955, 2125
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	3 cut(s)	1035, 1755, 1854
Bpu10I	CCTNAGC	1 cut(s)	885
BpuEI	CTTGAG	4 cut(s)	1052, 1763, 1874, 2155
BsaHI	GRCGYC	1 cut(s)	257
BsaI	GGTCTC	1 cut(s)	1343
BsaJI	CCNNGG	4 cut(s)	621, 932, 1356, 1849
BsaWI	WCCGGW	2 cut(s)	412, 1772
BsaXI	ACNNNNNCTCC	4 cut(s)	654, 684, 1728, 1758
Bsc4I	CCNNNNNNNGG	3 cut(s)	225, 1069, 2096
Bse118I	RCCGGY	1 cut(s)	1237
Bse1I	ACTGG	5 cut(s)	717, 1018, 1303, 1662, 1881
Bse3DI	GCAATG	2 cut(s)	429, 1850
BseAI	TCCGGA	1 cut(s)	412
BseDI	CCNNGG	4 cut(s)	621, 932, 1356, 1849
BseGI	GGATG	4 cut(s)	631, 829, 838, 1768
BseLI	CCNNNNNNNGG	3 cut(s)	225, 1069, 2096
BseMI	GCAATG	2 cut(s)	429, 1850
BseMII	CTCAG	6 cut(s)	63, 582, 702, 845, 876, 1224
BseNI	ACTGG	5 cut(s)	717, 1018, 1303, 1662, 1881
BseRI	GAGGAG	4 cut(s)	431, 491, 1198, 1488
BseXI	GCAGC	2 cut(s)	47, 1588
BseYI	CCCAGC	1 cut(s)	1604
BsgI	GTGCAG	1 cut(s)	2115
BshFI	GGCC	5 cut(s)	268, 343, 427, 959, 1241
BsiHKAI	GWGCWC	1 cut(s)	127
BsiHKCI	CYCGRG	1 cut(s)	968
BsiSI	CCGG	3 cut(s)	413, 1238, 1773
BslFI	GGGAC	1 cut(s)	1046
BslI	CCNNNNNNNGG	3 cut(s)	225, 1069, 2096
BsmAI	GTCTC	3 cut(s)	1343, 1892, 1992
BsmFI	GGGAC	1 cut(s)	1046
BsmI	GAATGC	1 cut(s)	686
BsnI	GGCC	5 cut(s)	268, 343, 427, 959, 1241
Bso31I	GGTCTC	1 cut(s)	1343
BsoBI	CYCGRG	1 cut(s)	968
Bsp1286I	GDGCHC	1 cut(s)	127
Bsp13I	TCCGGA	1 cut(s)	412
Bsp143I	GATC	4 cut(s)	979, 1566, 1675, 1789
BspACI	CCGC	3 cut(s)	80, 278, 684
BspANI	GGCC	5 cut(s)	268, 343, 427, 959, 1241
BspCNI	CTCAG	6 cut(s)	62, 583, 703, 846, 877, 1225
BspEI	TCCGGA	1 cut(s)	412
BspHI	TCATGA	2 cut(s)	172, 1221
BspLI	GGNNCC	6 cut(s)	62, 217, 981, 1207, 1362, 1870
BspMAI	CTGCAG	1 cut(s)	37
BspMI	ACCTGC	1 cut(s)	550
BspPI	GGATC	3 cut(s)	974, 987, 1797
BspTNI	GGTCTC	1 cut(s)	1343
BsrDI	GCAATG	2 cut(s)	429, 1850
BsrFI	RCCGGY	1 cut(s)	1237
BsrI	ACTGG	5 cut(s)	717, 1018, 1303, 1662, 1881
BssAI	RCCGGY	1 cut(s)	1237
BssECI	CCNNGG	4 cut(s)	621, 932, 1356, 1849
BssMI	GATC	4 cut(s)	979, 1566, 1675, 1789
BssNI	GRCGYC	1 cut(s)	257
BssT1I	CCWWGG	4 cut(s)	621, 932, 1356, 1849
Bst4CI	ACNGT	4 cut(s)	167, 1626, 1744, 1986
Bst6I	CTCTTC	5 cut(s)	117, 237, 300, 783, 1392
BstACI	GRCGYC	1 cut(s)	257
BstC8I	GCNNGC	2 cut(s)	78, 1239
BstDEI	CTNAG	7 cut(s)	49, 591, 711, 854, 885, 943, 1233
BstF5I	GGATG	4 cut(s)	631, 829, 838, 1768
BstHHI	GCGC	1 cut(s)	1587
BstKTI	GATC	4 cut(s)	982, 1569, 1678, 1792
BstMAI	GTCTC	3 cut(s)	1343, 1892, 1992
BstMBI	GATC	4 cut(s)	979, 1566, 1675, 1789
BstMWI	GCNNNNNNNGC	3 cut(s)	1234, 1829, 1868
BstNSI	RCATGY	2 cut(s)	782, 1866
BstSFI	CTRYAG	1 cut(s)	33
BstV1I	GCAGC	2 cut(s)	47, 1588
BstV2I	GAAGAC	2 cut(s)	1955, 2125
BstX2I	RGATCY	2 cut(s)	979, 1566
BstXI	CCANNNNNNTGG	1 cut(s)	1390
BstYI	RGATCY	2 cut(s)	979, 1566
BsuRI	GGCC	5 cut(s)	268, 343, 427, 959, 1241
BtsCI	GGATG	4 cut(s)	631, 829, 838, 1768
BtsI	GCAGTG	1 cut(s)	1048
BtsIMutI	CAGTG	4 cut(s)	724, 960, 1048, 1669
BveI	ACCTGC	1 cut(s)	550
Cac8I	GCNNGC	2 cut(s)	78, 1239
CciI	TCATGA	2 cut(s)	172, 1221
CfoI	GCGC	1 cut(s)	1587
Cfr10I	RCCGGY	1 cut(s)	1237
Cfr13I	GGNCC	4 cut(s)	267, 404, 426, 1918
CseI	GACGC	1 cut(s)	246
Csp6I	GTAC	1 cut(s)	1622
CviAII	CATG	9 cut(s)	173, 444, 527, 779, 803, 1222, 1673, 1863, 2024
CviQI	GTAC	1 cut(s)	1622
DdeI	CTNAG	7 cut(s)	49, 591, 711, 854, 885, 943, 1233
DpnI	GATC	4 cut(s)	981, 1568, 1677, 1791
DpnII	GATC	4 cut(s)	979, 1566, 1675, 1789
DrdI	GACNNNNNNGTC	1 cut(s)	1475
DseDI	GACNNNNNNGTC	1 cut(s)	1475
EaeI	YGGCCR	2 cut(s)	957, 1239
Eam1104I	CTCTTC	5 cut(s)	117, 237, 300, 783, 1392
EarI	CTCTTC	5 cut(s)	117, 237, 300, 783, 1392
Ecl136II	GAGCTC	1 cut(s)	125
Eco130I	CCWWGG	4 cut(s)	621, 932, 1356, 1849
Eco24I	GRGCYC	1 cut(s)	127
Eco31I	GGTCTC	1 cut(s)	1343
Eco47I	GGWCC	2 cut(s)	404, 1918
Eco53kI	GAGCTC	1 cut(s)	125
Eco57I	CTGAAG	5 cut(s)	900, 1347, 1583, 1617, 2128
Eco88I	CYCGRG	1 cut(s)	968
EcoICRI	GAGCTC	1 cut(s)	125
EcoO109I	RGGNCCY	1 cut(s)	267
EcoRI	GAATTC	1 cut(s)	1264
EcoT14I	CCWWGG	4 cut(s)	621, 932, 1356, 1849
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	4 cut(s)	621, 932, 1356, 1849
FaeI	CATG	9 cut(s)	176, 447, 530, 782, 806, 1225, 1676, 1866, 2027
FaqI	GGGAC	1 cut(s)	1046
FatI	CATG	9 cut(s)	172, 443, 526, 778, 802, 1221, 1672, 1862, 2023
FauNDI	CATATG	1 cut(s)	1138
FbaI	TGATCA	1 cut(s)	1675
Fnu4HI	GCNGC	2 cut(s)	36, 1602
FokI	GGATG	4 cut(s)	638, 836, 845, 1775
FriOI	GRGCYC	1 cut(s)	127
Fsp4HI	GCNGC	2 cut(s)	36, 1602
FspBI	CTAG	6 cut(s)	87, 137, 192, 576, 1698, 1926
GlaI	GCGC	1 cut(s)	1586
GluI	GCNGC	2 cut(s)	36, 1602
GsaI	CCCAGC	1 cut(s)	1608
GsuI	CTGGAG	3 cut(s)	1035, 1755, 1854
HaeIII	GGCC	5 cut(s)	268, 343, 427, 959, 1241
HapII	CCGG	3 cut(s)	413, 1238, 1773
HgaI	GACGC	1 cut(s)	246
HhaI	GCGC	1 cut(s)	1587
Hin1I	GRCGYC	1 cut(s)	257
Hin1II	CATG	9 cut(s)	176, 447, 530, 782, 806, 1225, 1676, 1866, 2027
Hin6I	GCGC	1 cut(s)	1585
HinP1I	GCGC	1 cut(s)	1585
HindIII	AAGCTT	1 cut(s)	74
HpaII	CCGG	3 cut(s)	413, 1238, 1773
HpyCH4III	ACNGT	4 cut(s)	167, 1626, 1744, 1986
HpyCH4V	TGCA	7 cut(s)	35, 434, 802, 1136, 1843, 2096, 2123
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1234, 1829, 1868
HpyF3I	CTNAG	7 cut(s)	49, 591, 711, 854, 885, 943, 1233
Hsp92I	GRCGYC	1 cut(s)	257
Hsp92II	CATG	9 cut(s)	176, 447, 530, 782, 806, 1225, 1676, 1866, 2027
HspAI	GCGC	1 cut(s)	1585
Kpn2I	TCCGGA	1 cut(s)	412
KroI	GCCGGC	1 cut(s)	1237
KroNI	GCCGGC	1 cut(s)	1239
Ksp22I	TGATCA	1 cut(s)	1675
Kzo9I	GATC	4 cut(s)	979, 1566, 1675, 1789
LmnI	GCTCC	5 cut(s)	53, 556, 1211, 1835, 1868
Lsp1109I	GCAGC	2 cut(s)	47, 1588
LweI	GCATC	2 cut(s)	1009, 1753
MaeI	CTAG	6 cut(s)	87, 137, 192, 576, 1698, 1926
MaeIII	GTNAC	7 cut(s)	200, 842, 1082, 1666, 1738, 1744, 1969
MalI	GATC	4 cut(s)	981, 1568, 1677, 1791
MboI	GATC	4 cut(s)	979, 1566, 1675, 1789
MfeI	CAATTG	1 cut(s)	2118
MflI	RGATCY	2 cut(s)	979, 1566
MhlI	GDGCHC	1 cut(s)	127
MlsI	TGGCCA	1 cut(s)	959
MluNI	TGGCCA	1 cut(s)	959
MlyI	GAGTC	9 cut(s)	21, 146, 293, 626, 722, 1409, 1485, 1523, 1770
MmeI	TCCRAC	1 cut(s)	1981
Mox20I	TGGCCA	1 cut(s)	959
MroI	TCCGGA	1 cut(s)	412
MroNI	GCCGGC	1 cut(s)	1237
MroXI	GAANNNNTTC	2 cut(s)	1308, 1901
MscI	TGGCCA	1 cut(s)	959
MseI	TTAA	6 cut(s)	531, 582, 630, 918, 1250, 1287
MslI	CAYNNNNRTG	1 cut(s)	1755
Msp20I	TGGCCA	1 cut(s)	959
MspI	CCGG	3 cut(s)	413, 1238, 1773
MunI	CAATTG	1 cut(s)	2118
Mva1269I	GAATGC	1 cut(s)	686
MwoI	GCNNNNNNNGC	3 cut(s)	1234, 1829, 1868
NaeI	GCCGGC	1 cut(s)	1239
NdeI	CATATG	1 cut(s)	1138
NdeII	GATC	4 cut(s)	979, 1566, 1675, 1789
NgoMIV	GCCGGC	1 cut(s)	1237
NlaIII	CATG	9 cut(s)	176, 447, 530, 782, 806, 1225, 1676, 1866, 2027
NlaIV	GGNNCC	6 cut(s)	62, 217, 981, 1207, 1362, 1870
NmuCI	GTSAC	1 cut(s)	1666
NspI	RCATGY	2 cut(s)	782, 1866
OliI	CACNNNNGTG	1 cut(s)	1755
PaeR7I	CTCGAG	1 cut(s)	968
PagI	TCATGA	2 cut(s)	172, 1221
PctI	GAATGC	1 cut(s)	686
PdiI	GCCGGC	1 cut(s)	1239
PdmI	GAANNNNTTC	2 cut(s)	1308, 1901
PkrI	GCNGC	2 cut(s)	37, 1603
PleI	GAGTC	9 cut(s)	21, 146, 292, 625, 721, 1408, 1484, 1523, 1770
PpsI	GAGTC	9 cut(s)	21, 146, 292, 625, 721, 1408, 1484, 1523, 1770
Psp124BI	GAGCTC	1 cut(s)	127
PspFI	CCCAGC	1 cut(s)	1604
PspN4I	GGNNCC	6 cut(s)	62, 217, 981, 1207, 1362, 1870
PspPI	GGNCC	4 cut(s)	267, 404, 426, 1918
PstI	CTGCAG	1 cut(s)	37
PsuI	RGATCY	2 cut(s)	979, 1566
RsaI	GTAC	1 cut(s)	1623
RsaNI	GTAC	1 cut(s)	1622
RseI	CAYNNNNRTG	1 cut(s)	1755
SacI	GAGCTC	1 cut(s)	127
SaqAI	TTAA	6 cut(s)	531, 582, 630, 918, 1250, 1287
SatI	GCNGC	2 cut(s)	36, 1602
Sau3AI	GATC	4 cut(s)	979, 1566, 1675, 1789
Sau96I	GGNCC	4 cut(s)	267, 404, 426, 1918
SchI	GAGTC	9 cut(s)	21, 146, 293, 626, 722, 1409, 1485, 1523, 1770
SduI	GDGCHC	1 cut(s)	127
SfaNI	GCATC	2 cut(s)	1009, 1753
SfcI	CTRYAG	1 cut(s)	33
Sfr274I	CTCGAG	1 cut(s)	968
SinI	GGWCC	2 cut(s)	404, 1918
SlaI	CTCGAG	1 cut(s)	968
SmiMI	CAYNNNNRTG	1 cut(s)	1755
SmlI	CTYRAG	5 cut(s)	968, 1067, 1778, 1889, 2170
SmoI	CTYRAG	5 cut(s)	968, 1067, 1778, 1889, 2170
SpeI	ACTAGT	1 cut(s)	191
SsiI	CCGC	3 cut(s)	80, 278, 684
SspMI	CTAG	6 cut(s)	87, 137, 192, 576, 1698, 1926
SstI	GAGCTC	1 cut(s)	127
StyI	CCWWGG	4 cut(s)	621, 932, 1356, 1849
TaaI	ACNGT	4 cut(s)	167, 1626, 1744, 1986
TaqI	TCGA	2 cut(s)	25, 969
TatI	WGTACW	1 cut(s)	1621
Tru1I	TTAA	6 cut(s)	531, 582, 630, 918, 1250, 1287
Tru9I	TTAA	6 cut(s)	531, 582, 630, 918, 1250, 1287
TscAI	CASTG	4 cut(s)	724, 967, 1048, 1669
TseFI	GTSAC	1 cut(s)	1666
TseI	GCWGC	2 cut(s)	35, 1601
Tsp45I	GTSAC	1 cut(s)	1666
TspGWI	ACGGA	2 cut(s)	802, 1541
TspRI	CASTG	4 cut(s)	724, 967, 1048, 1669
VpaK11BI	GGWCC	2 cut(s)	404, 1918
XapI	RAATTY	5 cut(s)	436, 742, 1031, 1264, 1900
XbaI	TCTAGA	1 cut(s)	136
XceI	RCATGY	2 cut(s)	782, 1866
XhoI	CTCGAG	1 cut(s)	968
XmnI	GAANNNNTTC	2 cut(s)	1308, 1901
XspI	CTAG	6 cut(s)	87, 137, 192, 576, 1698, 1926

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.