Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0015598

Physical Location & Seq

Genomic Coordinates Reverse (-)

40816840 .. 40819727

Gene Structure 2888 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG241500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGACTCGTCAAAGCCTTATGTTCGACTCTCTGCAGCACAAGACAACTCAGGAGCTTGGAACCCACAACAGAAGCTTGCAGTTTCTAGTTCATCTTCACTTTCAGGTTCTCTTCCTATCCGAGCTCGTCTTACTCTAGATTCTGATTCTGACTCTGAAATCAACGGTGGTCATGAATTGGGTTATATTACTAGCAGTAGTAATATTAGTGTTGGTTCCGAGAGTGGGTTTGTGAGTGGGGAAGAGTTTGAAACGGCGTCAGAGAGGCCCTTCGTGGCGGTGGAGTCGGGTGAGGAAGCCCTTGAAGAGAGTGGCTCTGTTGAAAGATATGAGGTTTTTTGGCCTTCTGTGTCTGACCCAGATGAATATGAAGAAGCTGTTGTGGGTAAAGTTATGGTGGGTGGTCCGATTTCGGAGGAGGTTAGGCCCATTGCAAATTTGTCATGGGAGAGTGATGGGAGTGATGCAGTGAGTGAGGAGACTGAAGAAGTGAGTGAAGATGAAGGTGGTGGATTGTTGGGTCATGTTAAGGCTCTGGTTTATGGGTTTGTGGAGCAGGTTGGTATTCCACCTAGAGTTAAGGTTTCTGAGGTTGAGGAAGGAGAAGAAGATGAGTCCTTGGTTGTTAAAGAATCAAGTTTTGTTGAAGGTGGAAATGGAGATTCTGTTCAAGTGGAATGCGGTGAGGATTGTAGTTTTGATACTGCCGAGTCCAGTGAAACGAACTCTGTTCAGTTGAATTTGAATGTATTGGAAGGTGGAGAGAAAGATAAGTATGTTGAAGAAGAGTTCTTTGTGCATGAAAGTTCCGTGAAATTGGATGAATTGGATGTTGAGGGTAACGAGAATCTGAGTATGGGAAATAGTCATATATCTGAAGCTGAGGAAGATAAAGTTGAATATAGTGATTCCTTTAACTCAATCACACCAAGGTCTGTCTTAGGTGAGAATGTGGCCACTGAACTCGAGATTGAGGATCCGATTGCTAATGGGAAGGACTTGGTTTTTACTGGAGATGCTGGTGTGAAATTTCAAGGCAGTGAAGCCAAAGTGGAAGTCCCTCTCAAGGAGAAGGGTTACACTATGGAACAGCACCCAACCAGCTTGGGTCTGTTTGTGGATAGTGTTGCACATGGGTTTCAGGTTTATGAGGTTGAAAAAGAAGTAGAAGAAGAGCACAAGTTAGTGATGGGGAAAGGCTCCTCCGATTCCTTCATGAAGCAGTCTGAGCCGGCCACAGAATTAAAGGGTGTTCAGAATTCAGACTTGAAAGCCATTGTTAAAGGTCAAACTGGGGAATCCATTCAAGCTGAATGGACTGAAGATAATGGTCTTGGTGGTGTGGAAACCAAGGAACCAGATATTTTGGAGAAAGCCAAGAGTATGGCAGAAGAGTCTATAATGCCTTCCCCAAAAAGCAAAACGAGTGATGTTGATATTAGCGAAAGTTTTGGGGCATTGGATAGAGGAGTCCATTCAGAATGTGATTCTGATGTTGAGGGGAGTGGAAATCAGATAACGGACTCCAATTCATATTCACAGCCAAATCCAATTCTGAAGATCGTATATGTGAGTAAGCGCAATTTGTCTGAAGCTGCTGGGGGTGATGGATATGTACTGTGTTCTGATTTCCTTGAATCAATCACACCAAGTTCCAGTGTGACCCATGAACACATTTTTGGTGGTGAAACTAAGGTAAAAAATTGTAAAATAGGCAGAAGATTCGCTGGAGTAACCGTAACTCACTTGGGTGAGGATGCCACCACCGGACTCAAGATTGAGGATCAGATTGCTATTGGGAAGGGCTTGGTGATGGCTGGAAGTGCTGGAGCTGTGCAATGCCAAGGTGATACAGCATGTGGAGCCAAACTGGAATTGTGCCTCAAGAAGAAGAATTTCCCTATAAAGCAGGACCAAACTAGCTTGGGTCTGTCTTTGATGAAGTGGGGTGGTGGTCTTCTAGTAACAACCGATATACTGTCTCGGTTCTCTGTTGGAAGTTCTAAAATAGCTGTTCATGTTGTATTGGACAACAAGCAGAGGGGAAAGATTGCTATAAGAACCAGCAACTCCGATAAAATCCCAAGCGCAGGGATTATTGGGATTCTCTCAATTGCAGTTTCAGTCTTCGGGTTCTTCCGTTCAAGATTCGGTGTTCAGAACTCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

723

Amino Acids

77.33

Weight (kDa)

4.46

Isoelectric Point (pI)

41.05

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOC159_MAD	PF11886	559 - 709	3.1e-39	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0015598)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g18070
malus_domestica	MD16G1168600.v1.1
prunus_persica	Prupe.1G136400_v2.0.a1
pyrus_communis	pycom16g14200
rosa_chinensis	RchiOBHm_Chr4g0422301
rosa_laevigata	RLG00000007622
rosa_multiflora	Rmu_sc0013245.1_g000017 Rmu_sc0019605.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364390
rosa_rugosa	Rorug04G0179100
rosa_samantha	Rh4AG238400 Rh4BG241500 Rh4CG253400 Rh4DG237100 Rh4DG237200
rosa_wichuraiana	Rw4G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	547
AciI	CCGC	2 cut(s)	278, 681
AclWI	GGATC	3 cut(s)	971, 984, 1791
AcoI	YGGCCR	2 cut(s)	954, 1233
AcsI	RAATTY	5 cut(s)	436, 739, 1028, 1258, 1894
AcuI	CTGAAG	5 cut(s)	504, 897, 1341, 1577, 1611
AcyI	GRCGYC	1 cut(s)	257
AfaI	GTAC	1 cut(s)	1617
AfiI	CCNNNNNNNGG	3 cut(s)	225, 1066, 2090
AjuI	GAANNNNNNNTTGG	2 cut(s)	1662, 1694
AleI	CACNNNNGTG	1 cut(s)	1749
AloI	GAACNNNNNNTCC	2 cut(s)	651, 683
Alw21I	GWGCWC	2 cut(s)	127, 1179
Alw26I	GTCTC	2 cut(s)	473, 1986
AlwI	GGATC	3 cut(s)	971, 984, 1791
Ama87I	CYCGRG	1 cut(s)	965
AoxI	GGCC	5 cut(s)	266, 341, 425, 954, 1233
ApeKI	GCWGC	2 cut(s)	35, 1595
ApoI	RAATTY	5 cut(s)	436, 739, 1028, 1258, 1894
ArsI	GACNNNNNNTTYG	2 cut(s)	1041, 1073
Asp700I	GAANNNNTTC	2 cut(s)	1302, 1895
AspLEI	GCGC	2 cut(s)	1581, 2090
AspS9I	GGNCC	4 cut(s)	267, 404, 426, 1912
AsuHPI	GGTGA	8 cut(s)	302, 695, 956, 1616, 1697, 1763, 1822, 1859
AvaI	CYCGRG	1 cut(s)	965
AvaII	GGWCC	2 cut(s)	404, 1912
BalI	TGGCCA	1 cut(s)	956
BamHI	GGATCC	1 cut(s)	976
BanII	GRGCYC	1 cut(s)	127
BbsI	GAAGAC	2 cut(s)	1949, 2119
Bbv12I	GWGCWC	2 cut(s)	127, 1179
BbvCI	CCTCAGC	1 cut(s)	882
BbvI	GCAGC	2 cut(s)	47, 1582
BccI	CCATC	4 cut(s)	449, 1183, 1601, 1807
BceAI	ACGGC	1 cut(s)	270
BcgI	CGANNNNNNTGC	2 cut(s)	1705, 1739
BcoDI	GTCTC	2 cut(s)	473, 1986
BfaI	CTAG	6 cut(s)	87, 137, 192, 573, 1920, 1961
BfmI	CTRYAG	1 cut(s)	33
BfuAI	ACCTGC	1 cut(s)	547
BisI	GCNGC	2 cut(s)	36, 1596
BlsI	GCNGC	2 cut(s)	37, 1597
Bme18I	GGWCC	2 cut(s)	404, 1912
BmeT110I	CYCGRG	1 cut(s)	965
BmgT120I	GGNCC	4 cut(s)	267, 404, 426, 1912
BmiI	GGNNCC	6 cut(s)	62, 217, 978, 1201, 1356, 1864
BmrI	ACTGGG	1 cut(s)	1302
BmsI	GCATC	3 cut(s)	454, 1006, 1747
BmuI	ACTGGG	1 cut(s)	1302
BpiI	GAAGAC	2 cut(s)	1949, 2119
BplI	GAGNNNNNCTC	2 cut(s)	299, 331
BpmI	CTGGAG	3 cut(s)	1032, 1749, 1848
Bpu10I	CCTNAGC	1 cut(s)	882
BpuEI	CTTGAG	4 cut(s)	1049, 1757, 1868, 2149
BsaHI	GRCGYC	1 cut(s)	257
BsaJI	CCNNGG	4 cut(s)	618, 929, 1350, 1843
BsaWI	WCCGGW	1 cut(s)	1766
BsaXI	ACNNNNNCTCC	4 cut(s)	651, 681, 1722, 1752
Bsc4I	CCNNNNNNNGG	3 cut(s)	225, 1066, 2090
Bse118I	RCCGGY	1 cut(s)	1231
Bse1I	ACTGG	5 cut(s)	714, 1015, 1297, 1656, 1875
Bse3DI	GCAATG	2 cut(s)	429, 1844
BseDI	CCNNGG	4 cut(s)	618, 929, 1350, 1843
BseGI	GGATG	3 cut(s)	826, 835, 1762
BseLI	CCNNNNNNNGG	3 cut(s)	225, 1066, 2090
BseMI	GCAATG	2 cut(s)	429, 1844
BseMII	CTCAG	5 cut(s)	63, 579, 842, 873, 1218
BseNI	ACTGG	5 cut(s)	714, 1015, 1297, 1656, 1875
BseRI	GAGGAG	4 cut(s)	431, 491, 1192, 1482
BseXI	GCAGC	2 cut(s)	47, 1582
BseYI	CCCAGC	1 cut(s)	1598
BshFI	GGCC	5 cut(s)	268, 343, 427, 956, 1235
BsiHKAI	GWGCWC	2 cut(s)	127, 1179
BsiHKCI	CYCGRG	1 cut(s)	965
BsiSI	CCGG	2 cut(s)	1232, 1767
BslFI	GGGAC	1 cut(s)	1043
BslI	CCNNNNNNNGG	3 cut(s)	225, 1066, 2090
BsmAI	GTCTC	2 cut(s)	473, 1986
BsmFI	GGGAC	1 cut(s)	1043
BsmI	GAATGC	1 cut(s)	683
BsnI	GGCC	5 cut(s)	268, 343, 427, 956, 1235
BsoBI	CYCGRG	1 cut(s)	965
Bsp1286I	GDGCHC	2 cut(s)	127, 1179
Bsp143I	GATC	3 cut(s)	976, 1560, 1783
BspACI	CCGC	2 cut(s)	278, 681
BspANI	GGCC	5 cut(s)	268, 343, 427, 956, 1235
BspCNI	CTCAG	5 cut(s)	62, 580, 843, 874, 1219
BspHI	TCATGA	2 cut(s)	172, 1215
BspLI	GGNNCC	6 cut(s)	62, 217, 978, 1201, 1356, 1864
BspMAI	CTGCAG	1 cut(s)	37
BspMI	ACCTGC	1 cut(s)	547
BspPI	GGATC	3 cut(s)	971, 984, 1791
BspQI	GCTCTTC	1 cut(s)	1167
BsrDI	GCAATG	2 cut(s)	429, 1844
BsrFI	RCCGGY	1 cut(s)	1231
BsrI	ACTGG	5 cut(s)	714, 1015, 1297, 1656, 1875
BssAI	RCCGGY	1 cut(s)	1231
BssECI	CCNNGG	4 cut(s)	618, 929, 1350, 1843
BssMI	GATC	3 cut(s)	976, 1560, 1783
BssNI	GRCGYC	1 cut(s)	257
BssT1I	CCWWGG	4 cut(s)	618, 929, 1350, 1843
Bst4CI	ACNGT	4 cut(s)	167, 1620, 1738, 1980
Bst6I	CTCTTC	6 cut(s)	117, 237, 300, 780, 1167, 1386
BstACI	GRCGYC	1 cut(s)	257
BstC8I	GCNNGC	2 cut(s)	78, 1233
BstDEI	CTNAG	7 cut(s)	49, 588, 851, 882, 940, 1227, 1692
BstF5I	GGATG	3 cut(s)	826, 835, 1762
BstHHI	GCGC	2 cut(s)	1581, 2090
BstKTI	GATC	3 cut(s)	979, 1563, 1786
BstMAI	GTCTC	2 cut(s)	473, 1986
BstMBI	GATC	3 cut(s)	976, 1560, 1783
BstMWI	GCNNNNNNNGC	3 cut(s)	1228, 1823, 1862
BstNSI	RCATGY	1 cut(s)	1860
BstSFI	CTRYAG	1 cut(s)	33
BstV1I	GCAGC	2 cut(s)	47, 1582
BstV2I	GAAGAC	2 cut(s)	1949, 2119
BstX2I	RGATCY	1 cut(s)	976
BstXI	CCANNNNNNTGG	1 cut(s)	1384
BstYI	RGATCY	1 cut(s)	976
BsuRI	GGCC	5 cut(s)	268, 343, 427, 956, 1235
BtsCI	GGATG	3 cut(s)	826, 835, 1762
BtsI	GCAGTG	2 cut(s)	474, 1045
BtsIMutI	CAGTG	5 cut(s)	474, 721, 957, 1045, 1663
BveI	ACCTGC	1 cut(s)	547
Cac8I	GCNNGC	2 cut(s)	78, 1233
CciI	TCATGA	2 cut(s)	172, 1215
CfoI	GCGC	2 cut(s)	1581, 2090
Cfr10I	RCCGGY	1 cut(s)	1231
Cfr13I	GGNCC	4 cut(s)	267, 404, 426, 1912
CseI	GACGC	1 cut(s)	246
Csp6I	GTAC	1 cut(s)	1616
CviAII	CATG	9 cut(s)	173, 444, 524, 800, 1133, 1216, 1667, 1857, 2018
CviQI	GTAC	1 cut(s)	1616
DdeI	CTNAG	7 cut(s)	49, 588, 851, 882, 940, 1227, 1692
DpnI	GATC	3 cut(s)	978, 1562, 1785
DpnII	GATC	3 cut(s)	976, 1560, 1783
EaeI	YGGCCR	2 cut(s)	954, 1233
Eam1104I	CTCTTC	6 cut(s)	117, 237, 300, 780, 1167, 1386
EarI	CTCTTC	6 cut(s)	117, 237, 300, 780, 1167, 1386
Ecl136II	GAGCTC	1 cut(s)	125
Eco130I	CCWWGG	4 cut(s)	618, 929, 1350, 1843
Eco24I	GRGCYC	1 cut(s)	127
Eco47I	GGWCC	2 cut(s)	404, 1912
Eco53kI	GAGCTC	1 cut(s)	125
Eco57I	CTGAAG	5 cut(s)	504, 897, 1341, 1577, 1611
Eco88I	CYCGRG	1 cut(s)	965
EcoICRI	GAGCTC	1 cut(s)	125
EcoO109I	RGGNCCY	1 cut(s)	267
EcoRI	GAATTC	1 cut(s)	1258
EcoT14I	CCWWGG	4 cut(s)	618, 929, 1350, 1843
EcoT38I	GRGCYC	1 cut(s)	127
ErhI	CCWWGG	4 cut(s)	618, 929, 1350, 1843
FaeI	CATG	9 cut(s)	176, 447, 527, 803, 1136, 1219, 1670, 1860, 2021
FaqI	GGGAC	1 cut(s)	1043
FatI	CATG	9 cut(s)	172, 443, 523, 799, 1132, 1215, 1666, 1856, 2017
Fnu4HI	GCNGC	2 cut(s)	36, 1596
FokI	GGATG	3 cut(s)	833, 842, 1769
FriOI	GRGCYC	1 cut(s)	127
Fsp4HI	GCNGC	2 cut(s)	36, 1596
FspBI	CTAG	6 cut(s)	87, 137, 192, 573, 1920, 1961
GlaI	GCGC	2 cut(s)	1580, 2089
GluI	GCNGC	2 cut(s)	36, 1596
GsaI	CCCAGC	1 cut(s)	1602
GsuI	CTGGAG	3 cut(s)	1032, 1749, 1848
HaeIII	GGCC	5 cut(s)	268, 343, 427, 956, 1235
HapII	CCGG	2 cut(s)	1232, 1767
HgaI	GACGC	1 cut(s)	246
HhaI	GCGC	2 cut(s)	1581, 2090
Hin1I	GRCGYC	1 cut(s)	257
Hin1II	CATG	9 cut(s)	176, 447, 527, 803, 1136, 1219, 1670, 1860, 2021
Hin6I	GCGC	2 cut(s)	1579, 2088
HinP1I	GCGC	2 cut(s)	1579, 2088
HindIII	AAGCTT	1 cut(s)	74
HpaII	CCGG	2 cut(s)	1232, 1767
HphI	GGTGA	8 cut(s)	302, 695, 956, 1616, 1697, 1763, 1822, 1859
Hpy188III	TCNNGA	9 cut(s)	51, 137, 173, 967, 1216, 1774, 1885, 2145, 2166
HpyCH4III	ACNGT	4 cut(s)	167, 1620, 1738, 1980
HpyCH4V	TGCA	8 cut(s)	35, 80, 434, 467, 799, 1130, 1837, 2117
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1228, 1823, 1862
HpyF3I	CTNAG	7 cut(s)	49, 588, 851, 882, 940, 1227, 1692
Hsp92I	GRCGYC	1 cut(s)	257
Hsp92II	CATG	9 cut(s)	176, 447, 527, 803, 1136, 1219, 1670, 1860, 2021
HspAI	GCGC	2 cut(s)	1579, 2088
KroI	GCCGGC	1 cut(s)	1231
KroNI	GCCGGC	1 cut(s)	1233
Kzo9I	GATC	3 cut(s)	976, 1560, 1783
LguI	GCTCTTC	1 cut(s)	1167
LmnI	GCTCC	5 cut(s)	53, 553, 1205, 1829, 1862
Lsp1109I	GCAGC	2 cut(s)	47, 1582
LweI	GCATC	3 cut(s)	454, 1006, 1747
MaeI	CTAG	6 cut(s)	87, 137, 192, 573, 1920, 1961
MaeIII	GTNAC	6 cut(s)	839, 1076, 1660, 1732, 1738, 1963
MalI	GATC	3 cut(s)	978, 1562, 1785
MboI	GATC	3 cut(s)	976, 1560, 1783
MfeI	CAATTG	1 cut(s)	2112
MflI	RGATCY	1 cut(s)	976
MhlI	GDGCHC	2 cut(s)	127, 1179
MlsI	TGGCCA	1 cut(s)	956
MluNI	TGGCCA	1 cut(s)	956
MlyI	GAGTC	9 cut(s)	21, 146, 293, 623, 719, 1403, 1479, 1517, 1764
MmeI	TCCRAC	1 cut(s)	1975
Mox20I	TGGCCA	1 cut(s)	956
MroNI	GCCGGC	1 cut(s)	1231
MroXI	GAANNNNTTC	2 cut(s)	1302, 1895
MscI	TGGCCA	1 cut(s)	956
MseI	TTAA	6 cut(s)	528, 579, 627, 915, 1244, 1281
MslI	CAYNNNNRTG	1 cut(s)	1749
Msp20I	TGGCCA	1 cut(s)	956
MspI	CCGG	2 cut(s)	1232, 1767
MunI	CAATTG	1 cut(s)	2112
Mva1269I	GAATGC	1 cut(s)	683
MwoI	GCNNNNNNNGC	3 cut(s)	1228, 1823, 1862
NaeI	GCCGGC	1 cut(s)	1233
NdeII	GATC	3 cut(s)	976, 1560, 1783
NgoMIV	GCCGGC	1 cut(s)	1231
NlaIII	CATG	9 cut(s)	176, 447, 527, 803, 1136, 1219, 1670, 1860, 2021
NlaIV	GGNNCC	6 cut(s)	62, 217, 978, 1201, 1356, 1864
NmeAIII	GCCGAG	1 cut(s)	733
NmuCI	GTSAC	1 cut(s)	1660
NspI	RCATGY	1 cut(s)	1860
OliI	CACNNNNGTG	1 cut(s)	1749
PaeR7I	CTCGAG	1 cut(s)	965
PagI	TCATGA	2 cut(s)	172, 1215
PciSI	GCTCTTC	1 cut(s)	1167
PctI	GAATGC	1 cut(s)	683
PdiI	GCCGGC	1 cut(s)	1233
PdmI	GAANNNNTTC	2 cut(s)	1302, 1895
PkrI	GCNGC	2 cut(s)	37, 1597
PleI	GAGTC	9 cut(s)	21, 146, 292, 622, 718, 1402, 1478, 1517, 1764
PpsI	GAGTC	9 cut(s)	21, 146, 292, 622, 718, 1402, 1478, 1517, 1764
Psp124BI	GAGCTC	1 cut(s)	127
PspFI	CCCAGC	1 cut(s)	1598
PspN4I	GGNNCC	6 cut(s)	62, 217, 978, 1201, 1356, 1864
PspPI	GGNCC	4 cut(s)	267, 404, 426, 1912
PstI	CTGCAG	1 cut(s)	37
PsuI	RGATCY	1 cut(s)	976
RsaI	GTAC	1 cut(s)	1617
RsaNI	GTAC	1 cut(s)	1616
RseI	CAYNNNNRTG	1 cut(s)	1749
SacI	GAGCTC	1 cut(s)	127
SapI	GCTCTTC	1 cut(s)	1167
SaqAI	TTAA	6 cut(s)	528, 579, 627, 915, 1244, 1281
SatI	GCNGC	2 cut(s)	36, 1596
Sau3AI	GATC	3 cut(s)	976, 1560, 1783
Sau96I	GGNCC	4 cut(s)	267, 404, 426, 1912
SchI	GAGTC	9 cut(s)	21, 146, 293, 623, 719, 1403, 1479, 1517, 1764
SduI	GDGCHC	2 cut(s)	127, 1179
SfaNI	GCATC	3 cut(s)	454, 1006, 1747
SfcI	CTRYAG	1 cut(s)	33
Sfr274I	CTCGAG	1 cut(s)	965
SinI	GGWCC	2 cut(s)	404, 1912
SlaI	CTCGAG	1 cut(s)	965
SmiMI	CAYNNNNRTG	1 cut(s)	1749
SmlI	CTYRAG	5 cut(s)	965, 1064, 1772, 1883, 2164
SmoI	CTYRAG	5 cut(s)	965, 1064, 1772, 1883, 2164
SsiI	CCGC	2 cut(s)	278, 681
SspI	AATATT	1 cut(s)	205
SspMI	CTAG	6 cut(s)	87, 137, 192, 573, 1920, 1961
SstI	GAGCTC	1 cut(s)	127
StyI	CCWWGG	4 cut(s)	618, 929, 1350, 1843
TaaI	ACNGT	4 cut(s)	167, 1620, 1738, 1980
TaqI	TCGA	2 cut(s)	25, 966
TatI	WGTACW	1 cut(s)	1615
Tru1I	TTAA	6 cut(s)	528, 579, 627, 915, 1244, 1281
Tru9I	TTAA	6 cut(s)	528, 579, 627, 915, 1244, 1281
TscAI	CASTG	5 cut(s)	474, 721, 964, 1045, 1663
TseFI	GTSAC	1 cut(s)	1660
TseI	GCWGC	2 cut(s)	35, 1595
Tsp45I	GTSAC	1 cut(s)	1660
TspGWI	ACGGA	3 cut(s)	799, 1535, 2129
TspRI	CASTG	5 cut(s)	474, 721, 964, 1045, 1663
VpaK11BI	GGWCC	2 cut(s)	404, 1912
XapI	RAATTY	5 cut(s)	436, 739, 1028, 1258, 1894
XbaI	TCTAGA	1 cut(s)	136
XceI	RCATGY	1 cut(s)	1860
XhoI	CTCGAG	1 cut(s)	965
XmnI	GAANNNNTTC	2 cut(s)	1302, 1895
XspI	CTAG	6 cut(s)	87, 137, 192, 573, 1920, 1961

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.