Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr16

Orthogroup ID

OG0015598

Physical Location & Seq

Genomic Coordinates Forward (+)

10226020 .. 10228206

Gene Structure 2187 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom16g14200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2187 bp

ATGGACTCCTCAAAGCCTTCTGTCCGTCTTTCTGCAGCACAAGGGACTCTGGTATCCGCCCAATCCAGCAACCCGCCGCCGCACAAGCTTGCTCTTTCCCACACCTCTTCACTCTCAGGTTCGCTCTCTATCCGAGCTCCTCCTACCCCTGATTCCGATTCCGATTACGATTCCCAGTTCCAAGAATTGGGTTATAGCTCTAGTGGTAATATTAGTAGTAGTGAATCTGATTCCGAGGCCTTCGTGACTGGGGAGGAGTTCGAAACGGCATCGGAGAGGCCGCTGTTGGCCGACCCAGATGAGGAATTTCTCGGTCCTGTCGAAAGATACGAGCTTTCCTGGCCTTTAGTGGCTGACCCGGATGATGGGTTCGAGCCTGTTGTTGAGAAAGTTATGGTGGGTGACTCGGGGAGGGTTATGCCCGTTGCTCAGTTGTCATGGGAGAGTGATGATGATGGTGTGGTGGGTAGTGATGGGGTTTTGAGTGAAGTGGAAGACGGGGAGTTTTCGGTTCGGGTTAAGGTTCCGGGTAATGGGGTTGTGGAGAAGCGTAGTGTTGCGCCGAGGGTCAAGGTTTTCGAGGTTGAAGAAGGAGAAGAAGAAGATGAGTTAGTGAAGTCGAAAGAGTCTTTGGTGGTTGAACAAGCTGAACCTGTTGCAAATTTAAAGGGATTTAAAGCTGATGAGGGTTCGGATTTGAATAATTTTTTCGAAGCCAAAAGTGGGATTGAAAATAATGGTGTTGCTGCTGCTGAGATTGAAGATAACCGTCGAAATTCTGCGGAATTGAGCGTTAGTGTATCAGAAAAAGGGGAGAAAGGCAAGTATGTGGCAGAAGAATGCTTTGTGCATTGCCCAAATAGCGACAGGAGTAATGGTGTTGATTTGGGTGTTGAGGGGAATGAAAATCAGAATGTGGACTTGACAACCAATTCGCACCCGAATCTAGTTCCCGAGAGTTTGTATTTGGAAAATTGTAATTTATCTGAACTTACTAAGGATGATGAATTTGAAAATGCACTGTGTAGTGATTTACTTAAATCAATCACACTGAGTTCGCTATCTGTACCTCTCTTATGCAACAATGGGGCGGAAGATGTTGGTGCTGTGCAATTTCAAGGTGAAACAGCAGCATATGGAGCCAAAGTGGAAGTGCTTTTCAAGGAGAAGGAATTCCCTACAGAGAAAGAACAAACCAGTTTCGGTCTGTTTGGGGAGAAGATTATTATCACATCTAGAGTTTCAGTTCTTGAAGGAGAAGAATCGGGGCCGGTGCTGTCGAAAGAGTCCTCGGTCATTGAACGGTCTATTCAAGCGCAAAGGATTGAAGAAAATGGTCTTCCTGCTACTGAGATCAACAAGGGACTTGAAAGAGGACCAGAGAAAGGCAAGTATACGGCAGATGAATCAGTCGTGCATTGCACTAATGGCAAAAGGAGTGGTGTTGATTCTAATGGAAGTTCTGAGGCACCCGAAAGAGGAAAGCATTCAAGAACTGATTTTGGTGTTGAGGGGAATAAAGATCAAATTGGAGACTCGACGACATATTCAGAGCCAAATCCAGTTCAGGAGATTGTATGTTTGGGTAATGGCGATTTGTCTGAAGCTACTAAGTGTGATAGATTTGAATATGCACTGTGTAGGGATTTCCTTAAATTGGTCACGCCAAGTTCCTCCGCGACACGCAATCACATCTTTAGGGATGAGACCAAAGTCGAAAGTTTCAGCATAAACGGAACAGCAGCTGAGGTAACTGTAACTCTTTCAGATGAAAATATGGTCACCGGACTCAAGTTTGAGGACCAGTTGGCTATTGGGGAGCAATTGGTTTTGGCCGGAAGTGCTGGAGCGTTGCAATTTGAAGGTGATACAGCACATGGAGCCAAATTGGAGGTGCGTCTCAACGACAAGGATTTCCCTAGAAGGCAGGACCCAACCAGCTTGGGTTTGTCTCTGATGAAGTGGGGAGGTGGTCTTGTTCTAACAGCCGACATACTGTCTCTGTTCTCTGTCCGCAATTCTCAAATGGCTGTTCATGTTGTACTGGACAGCAAGCAAAGGGGCAAAATTGCTATAAAGACGGGCAGTTCAAACCAACTCCAAGTTGCACTTGTTGGGATTCTTTCAGTTGCGGCTTCAATCTTTGGGATTTTTCGCCCGAGATTCGGTGTTCAAAACTCAAGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003924 GO:0004888 GO:0004930 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0006605 GO:0006810 GO:0006886 GO:0007154 GO:0007165 GO:0007186 GO:0008104 GO:0008150 GO:0009507 GO:0009526 GO:0009527 GO:0009536 GO:0009707 GO:0009941 GO:0009987 GO:0015031 GO:0015833 GO:0016020 GO:0016462 GO:0016787 GO:0016817 GO:0016818 GO:0017038 GO:0017111 GO:0019867 GO:0023052 GO:0031090 GO:0031967 GO:0031968 GO:0031969 GO:0031975 GO:0032991 GO:0033036 GO:0033365 GO:0034613 GO:0038023 GO:0042170 GO:0042886 GO:0043021 GO:0043024 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0045036 GO:0045037 GO:0045184 GO:0046907 GO:0050789 GO:0050794 GO:0050896 GO:0051087 GO:0051179 GO:0051234 GO:0051641 GO:0051649 GO:0051716 GO:0055085 GO:0060089 GO:0061927 GO:0065002 GO:0065007 GO:0070727 GO:0071702 GO:0071705 GO:0071806 GO:0072594 GO:0072596 GO:0072598 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

AIG1 TOC159_MAD

Protein Analysis

729

Amino Acids

78.33

Weight (kDa)

4.53

Isoelectric Point (pI)

38.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOC159_MAD	PF11886	565 - 715	1.2e-40	Translocase of chloroplast 159/132, membrane anchor domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015598)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_4g18070
malus_domestica	MD16G1168600.v1.1
prunus_persica	Prupe.1G136400_v2.0.a1
pyrus_communis	pycom16g14200
rosa_chinensis	RchiOBHm_Chr4g0422301
rosa_laevigata	RLG00000007622
rosa_multiflora	Rmu_sc0013245.1_g000017 Rmu_sc0019605.1_g000001
rosa_roxburghii	Rroxscaffold_5G00364390
rosa_rugosa	Rorug04G0179100
rosa_samantha	Rh4AG238400 Rh4BG241500 Rh4CG253400 Rh4DG237100 Rh4DG237200
rosa_wichuraiana	Rw4G020630

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1468
AccB7I	CCANNNNNTGG	1 cut(s)	187
AccI	GTMKAC	1 cut(s)	1394
AccII	CGCG	1 cut(s)	1679
AcoI	YGGCCR	2 cut(s)	288, 1833
AcsI	RAATTY	5 cut(s)	305, 661, 775, 1007, 1172
AcuI	CTGAAG	1 cut(s)	1623
AfaI	GTAC	2 cut(s)	1068, 2043
AfiI	CCNNNNNNNGG	9 cut(s)	187, 301, 365, 533, 723, 1385, 1478, 1657, 2165
AhdI	GACNNNNNGTC	1 cut(s)	1996
AjnI	CCWGG	1 cut(s)	338
AjuI	GAANNNNNNNTTGG	2 cut(s)	614, 646
AloI	GAACNNNNNNTCC	2 cut(s)	353, 385
AluBI	AGCT	9 cut(s)	88, 137, 198, 334, 647, 680, 1607, 1745, 1941
AluI	AGCT	9 cut(s)	88, 137, 198, 334, 647, 680, 1607, 1745, 1941
Alw21I	GWGCWC	1 cut(s)	139
Alw26I	GTCTC	5 cut(s)	1527, 1700, 1904, 1956, 2004
AlwNI	CAGNNNCTG	1 cut(s)	1745
Ama87I	CYCGRG	3 cut(s)	406, 953, 2158
AoxI	GGCC	6 cut(s)	237, 278, 288, 341, 1268, 1833
ApeKI	GCWGC	5 cut(s)	35, 746, 749, 1130, 1742
ApoI	RAATTY	5 cut(s)	305, 661, 775, 1007, 1172
ArsI	GACNNNNNNTTYG	2 cut(s)	916, 948
Asp700I	GAANNNNTTC	2 cut(s)	1172, 1486
AspLEI	GCGC	2 cut(s)	562, 1318
AspS9I	GGNCC	5 cut(s)	314, 1268, 1376, 1801, 1930
AsuC2I	CCSGG	2 cut(s)	359, 528
AsuHPI	GGTGA	4 cut(s)	413, 1133, 1774, 1877
AsuII	TTCGAA	2 cut(s)	261, 711
AvaI	CYCGRG	3 cut(s)	406, 953, 2158
AvaII	GGWCC	4 cut(s)	314, 1376, 1801, 1930
BaeI	ACNNNNGTAYC	2 cut(s)	36, 69
BanI	GGYRCC	1 cut(s)	1468
BanII	GRGCYC	1 cut(s)	139
BbsI	GAAGAC	2 cut(s)	501, 1331
Bbv12I	GWGCWC	1 cut(s)	139
BbvCI	CCTCAGC	1 cut(s)	1746
BbvI	GCAGC	5 cut(s)	47, 733, 736, 1142, 1754
BccI	CCATC	3 cut(s)	359, 449, 467
BceAI	ACGGC	2 cut(s)	282, 1413
BciT130I	CCWGG	1 cut(s)	340
BciVI	GTATCC	1 cut(s)	64
BcnI	CCSGG	2 cut(s)	359, 528
BcoDI	GTCTC	5 cut(s)	1527, 1700, 1904, 1956, 2004
BfaI	CTAG	4 cut(s)	201, 947, 1236, 1920
BfmI	CTRYAG	2 cut(s)	33, 1179
BfuI	GTATCC	1 cut(s)	64
BisI	GCNGC	9 cut(s)	36, 77, 80, 281, 747, 750, 1131, 1743, 2133
BlsI	GCNGC	9 cut(s)	37, 78, 81, 282, 748, 751, 1132, 1744, 2134
Bme1390I	CCNGG	3 cut(s)	340, 359, 528
Bme18I	GGWCC	4 cut(s)	314, 1376, 1801, 1930
BmeRI	GACNNNNNGTC	1 cut(s)	1996
BmeT110I	CYCGRG	3 cut(s)	406, 953, 2158
BmgT120I	GGNCC	5 cut(s)	314, 1268, 1376, 1801, 1930
BmiI	GGNNCC	6 cut(s)	525, 1141, 1269, 1470, 1882, 1932
BmrFI	CCNGG	3 cut(s)	340, 359, 528
BmrI	ACTGGG	2 cut(s)	169, 258
BmsI	GCATC	1 cut(s)	278
BmuI	ACTGGG	2 cut(s)	169, 258
BoxI	GACNNNNGTC	1 cut(s)	1712
BpiI	GAAGAC	2 cut(s)	501, 1331
BpmI	CTGGAG	1 cut(s)	1866
Bpu10I	CCTNAGC	1 cut(s)	1746
Bpu14I	TTCGAA	2 cut(s)	261, 711
BpuEI	CTTGAG	2 cut(s)	1775, 2164
BpuMI	CCSGG	2 cut(s)	359, 528
BsaBI	GATNNNNATC	1 cut(s)	1226
BsaI	GGTCTC	1 cut(s)	1700
BsaJI	CCNNGG	3 cut(s)	234, 563, 1290
BsaWI	WCCGGW	1 cut(s)	1784
BsaXI	ACNNNNNCTCC	4 cut(s)	862, 892, 1131, 1161
Bsc4I	CCNNNNNNNGG	9 cut(s)	187, 301, 365, 533, 723, 1385, 1478, 1657, 2165
Bse118I	RCCGGY	1 cut(s)	1270
Bse1I	ACTGG	6 cut(s)	175, 253, 1197, 1562, 1804, 2049
Bse3DI	GCAATG	2 cut(s)	850, 1417
Bse8I	GATNNNNATC	1 cut(s)	1226
BseBI	CCWGG	1 cut(s)	340
BseDI	CCNNGG	3 cut(s)	234, 563, 1290
BseGI	GGATG	3 cut(s)	367, 1006, 1708
BseJI	GATNNNNATC	1 cut(s)	1226
BseLI	CCNNNNNNNGG	9 cut(s)	187, 301, 365, 533, 723, 1385, 1478, 1657, 2165
BseMI	GCAATG	2 cut(s)	850, 1417
BseMII	CTCAG	7 cut(s)	129, 443, 744, 1043, 1341, 1455, 1737
BseNI	ACTGG	6 cut(s)	175, 253, 1197, 1562, 1804, 2049
BseRI	GAGGAG	2 cut(s)	129, 269
BseXI	GCAGC	5 cut(s)	47, 733, 736, 1142, 1754
Bsh1236I	CGCG	1 cut(s)	1679
BshFI	GGCC	6 cut(s)	239, 280, 290, 343, 1270, 1835
BshNI	GGYRCC	1 cut(s)	1468
BsiHKAI	GWGCWC	1 cut(s)	139
BsiHKCI	CYCGRG	3 cut(s)	406, 953, 2158
BsiSI	CCGG	5 cut(s)	359, 527, 1271, 1785, 1836
BslFI	GGGAC	2 cut(s)	58, 1377
BslI	CCNNNNNNNGG	9 cut(s)	187, 301, 365, 533, 723, 1385, 1478, 1657, 2165
BsmAI	GTCTC	5 cut(s)	1527, 1700, 1904, 1956, 2004
BsmBI	CGTCTC	1 cut(s)	1904
BsmFI	GGGAC	2 cut(s)	58, 1377
BsmI	GAATGC	2 cut(s)	845, 1486
BsnI	GGCC	6 cut(s)	239, 280, 290, 343, 1270, 1835
Bso31I	GGTCTC	1 cut(s)	1700
BsoBI	CYCGRG	3 cut(s)	406, 953, 2158
Bsp119I	TTCGAA	2 cut(s)	261, 711
Bsp1286I	GDGCHC	1 cut(s)	139
Bsp143I	GATC	2 cut(s)	1353, 1522
BspANI	GGCC	6 cut(s)	239, 280, 290, 343, 1270, 1835
BspCNI	CTCAG	7 cut(s)	128, 442, 745, 1044, 1342, 1456, 1738
BspFNI	CGCG	1 cut(s)	1679
BspLI	GGNNCC	6 cut(s)	525, 1141, 1269, 1470, 1882, 1932
BspMAI	CTGCAG	1 cut(s)	37
BspT104I	TTCGAA	2 cut(s)	261, 711
BspT107I	GGYRCC	1 cut(s)	1468
BspTNI	GGTCTC	1 cut(s)	1700
BsrDI	GCAATG	2 cut(s)	850, 1417
BsrFI	RCCGGY	1 cut(s)	1270
BsrI	ACTGG	6 cut(s)	175, 253, 1197, 1562, 1804, 2049
BssAI	RCCGGY	1 cut(s)	1270
BssECI	CCNNGG	3 cut(s)	234, 563, 1290
BssMI	GATC	2 cut(s)	1353, 1522
BssNAI	GTATAC	1 cut(s)	1395
Bst1107I	GTATAC	1 cut(s)	1395
Bst2UI	CCWGG	1 cut(s)	340
Bst4CI	ACNGT	6 cut(s)	770, 1023, 1305, 1638, 1756, 1998
Bst6I	CTCTTC	1 cut(s)	112
BstBI	TTCGAA	2 cut(s)	261, 711
BstC8I	GCNNGC	2 cut(s)	90, 2054
BstDEI	CTNAG	9 cut(s)	115, 429, 753, 996, 1052, 1350, 1464, 1611, 1746
BstEII	GGTNACC	1 cut(s)	1780
BstF5I	GGATG	3 cut(s)	367, 1006, 1708
BstFNI	CGCG	1 cut(s)	1679
BstHHI	GCGC	2 cut(s)	562, 1318
BstKTI	GATC	2 cut(s)	1356, 1525
BstMAI	GTCTC	5 cut(s)	1527, 1700, 1904, 1956, 2004
BstMBI	GATC	2 cut(s)	1353, 1522
BstMWI	GCNNNNNNNGC	7 cut(s)	85, 340, 861, 1139, 1428, 1841, 1880
BstNI	CCWGG	1 cut(s)	340
BstPAI	GACNNNNGTC	1 cut(s)	1712
BstPI	GGTNACC	1 cut(s)	1780
BstSCI	CCNGG	3 cut(s)	338, 357, 526
BstSFI	CTRYAG	2 cut(s)	33, 1179
BstUI	CGCG	1 cut(s)	1679
BstV1I	GCAGC	5 cut(s)	47, 733, 736, 1142, 1754
BstV2I	GAAGAC	2 cut(s)	501, 1331
BstZ17I	GTATAC	1 cut(s)	1395
BsuI	GTATCC	1 cut(s)	64
BsuRI	GGCC	6 cut(s)	239, 280, 290, 343, 1270, 1835
BtsCI	GGATG	3 cut(s)	367, 1006, 1708
BtsIMutI	CAGTG	3 cut(s)	1019, 1049, 1634
Cac8I	GCNNGC	2 cut(s)	90, 2054
CaiI	CAGNNNCTG	1 cut(s)	1745
CfoI	GCGC	2 cut(s)	562, 1318
Cfr10I	RCCGGY	1 cut(s)	1270
Cfr13I	GGNCC	5 cut(s)	314, 1268, 1376, 1801, 1930
CseI	GACGC	1 cut(s)	1886
Csp6I	GTAC	2 cut(s)	1067, 2042
CspCI	CAANNNNNGTGG	2 cut(s)	1420, 1455
CviAII	CATG	3 cut(s)	438, 1877, 2036
CviQI	GTAC	2 cut(s)	1067, 2042
DdeI	CTNAG	9 cut(s)	115, 429, 753, 996, 1052, 1350, 1464, 1611, 1746
DpnI	GATC	2 cut(s)	1355, 1524
DpnII	GATC	2 cut(s)	1353, 1522
DraI	TTTAAA	2 cut(s)	666, 676
DriI	GACNNNNNGTC	1 cut(s)	1996
EaeI	YGGCCR	2 cut(s)	288, 1833
Eam1104I	CTCTTC	1 cut(s)	112
Eam1105I	GACNNNNNGTC	1 cut(s)	1996
EarI	CTCTTC	1 cut(s)	112
EciI	GGCGGA	2 cut(s)	46, 1106
Ecl136II	GAGCTC	1 cut(s)	137
Eco147I	AGGCCT	1 cut(s)	239
Eco24I	GRGCYC	1 cut(s)	139
Eco31I	GGTCTC	1 cut(s)	1700
Eco47I	GGWCC	4 cut(s)	314, 1376, 1801, 1930
Eco53kI	GAGCTC	1 cut(s)	137
Eco57I	CTGAAG	1 cut(s)	1623
Eco88I	CYCGRG	3 cut(s)	406, 953, 2158
Eco91I	GGTNACC	1 cut(s)	1780
EcoICRI	GAGCTC	1 cut(s)	137
EcoO109I	RGGNCCY	1 cut(s)	1930
EcoO65I	GGTNACC	1 cut(s)	1780
EcoRI	GAATTC	1 cut(s)	1172
EcoRII	CCWGG	1 cut(s)	338
EcoT38I	GRGCYC	1 cut(s)	139
Esp3I	CGTCTC	1 cut(s)	1904
FaeI	CATG	3 cut(s)	441, 1880, 2039
FalI	AAGNNNNNCTT	2 cut(s)	2094, 2126
FaqI	GGGAC	2 cut(s)	58, 1377
FatI	CATG	3 cut(s)	437, 1876, 2035
FauI	CCCGC	1 cut(s)	81
FauNDI	CATATG	1 cut(s)	1135
FblI	GTMKAC	1 cut(s)	1394
Fnu4HI	GCNGC	9 cut(s)	36, 77, 80, 281, 747, 750, 1131, 1743, 2133
FokI	GGATG	3 cut(s)	374, 1013, 1715
FriOI	GRGCYC	1 cut(s)	139
Fsp4HI	GCNGC	9 cut(s)	36, 77, 80, 281, 747, 750, 1131, 1743, 2133
FspBI	CTAG	4 cut(s)	201, 947, 1236, 1920
GlaI	GCGC	2 cut(s)	561, 1317
GluI	GCNGC	9 cut(s)	36, 77, 80, 281, 747, 750, 1131, 1743, 2133
GsuI	CTGGAG	1 cut(s)	1866
HaeIII	GGCC	6 cut(s)	239, 280, 290, 343, 1270, 1835
HapII	CCGG	5 cut(s)	359, 527, 1271, 1785, 1836
HgaI	GACGC	1 cut(s)	1886
HhaI	GCGC	2 cut(s)	562, 1318
Hin1II	CATG	3 cut(s)	441, 1880, 2039
Hin6I	GCGC	2 cut(s)	560, 1316
HinP1I	GCGC	2 cut(s)	560, 1316
HindIII	AAGCTT	1 cut(s)	86
HpaII	CCGG	5 cut(s)	359, 527, 1271, 1785, 1836
HphI	GGTGA	4 cut(s)	413, 1133, 1774, 1877
Hpy166II	GTNNAC	2 cut(s)	919, 1395
Hpy188III	TCNNGA	7 cut(s)	244, 953, 1236, 1250, 1491, 1568, 2181
Hpy8I	GTNNAC	2 cut(s)	919, 1395
Hpy99I	CGWCG	2 cut(s)	774, 1543
HpyAV	CCTTC	7 cut(s)	27, 250, 584, 1162, 1247, 1856, 1917
HpyCH4III	ACNGT	6 cut(s)	770, 1023, 1305, 1638, 1756, 1998
HpyF10VI	GCNNNNNNNGC	7 cut(s)	85, 340, 861, 1139, 1428, 1841, 1880
HpyF3I	CTNAG	9 cut(s)	115, 429, 753, 996, 1052, 1350, 1464, 1611, 1746
Hsp92II	CATG	3 cut(s)	441, 1880, 2039
HspAI	GCGC	2 cut(s)	560, 1316
Kzo9I	GATC	2 cut(s)	1353, 1522
LmnI	GCTCC	5 cut(s)	142, 1139, 1819, 1847, 1880
Lsp1109I	GCAGC	5 cut(s)	47, 733, 736, 1142, 1754
LweI	GCATC	1 cut(s)	278
MaeI	CTAG	4 cut(s)	201, 947, 1236, 1920
MaeIII	GTNAC	6 cut(s)	244, 401, 1660, 1750, 1756, 1780
MalI	GATC	2 cut(s)	1355, 1524
MboI	GATC	2 cut(s)	1353, 1522
MfeI	CAATTG	1 cut(s)	1823
MhlI	GDGCHC	1 cut(s)	139
MlyI	GAGTC	6 cut(s)	40, 398, 635, 1295, 1529, 1782
MroXI	GAANNNNTTC	2 cut(s)	1172, 1486
MseI	TTAA	5 cut(s)	519, 665, 675, 1038, 1653
MspA1I	CMGCKG	2 cut(s)	283, 1745
MspI	CCGG	5 cut(s)	359, 527, 1271, 1785, 1836
MspR9I	CCNGG	3 cut(s)	340, 359, 528
MunI	CAATTG	1 cut(s)	1823
Mva1269I	GAATGC	2 cut(s)	845, 1486
MvaI	CCWGG	1 cut(s)	340
MvnI	CGCG	1 cut(s)	1679
MwoI	GCNNNNNNNGC	7 cut(s)	85, 340, 861, 1139, 1428, 1841, 1880
NciI	CCSGG	2 cut(s)	359, 528
NdeI	CATATG	1 cut(s)	1135
NdeII	GATC	2 cut(s)	1353, 1522
NlaIII	CATG	3 cut(s)	441, 1880, 2039
NlaIV	GGNNCC	6 cut(s)	525, 1141, 1269, 1470, 1882, 1932
NmeAIII	GCCGAG	1 cut(s)	588
NmuCI	GTSAC	4 cut(s)	244, 401, 1660, 1780
NspV	TTCGAA	2 cut(s)	261, 711
PceI	AGGCCT	1 cut(s)	239
PcsI	WCGNNNNNNNCGW	2 cut(s)	318, 327
PctI	GAATGC	2 cut(s)	845, 1486
PdmI	GAANNNNTTC	2 cut(s)	1172, 1486
PflMI	CCANNNNNTGG	1 cut(s)	187
PkrI	GCNGC	9 cut(s)	37, 78, 81, 282, 748, 751, 1132, 1744, 2134
PleI	GAGTC	6 cut(s)	40, 398, 634, 1294, 1529, 1782
PpsI	GAGTC	6 cut(s)	40, 398, 634, 1294, 1529, 1782
PpuMI	RGGWCCY	1 cut(s)	1930
PshAI	GACNNNNGTC	1 cut(s)	1712
Psp124BI	GAGCTC	1 cut(s)	139
Psp5II	RGGWCCY	1 cut(s)	1930
Psp6I	CCWGG	1 cut(s)	338
PspEI	GGTNACC	1 cut(s)	1780
PspGI	CCWGG	1 cut(s)	338
PspN4I	GGNNCC	6 cut(s)	525, 1141, 1269, 1470, 1882, 1932
PspPI	GGNCC	5 cut(s)	314, 1268, 1376, 1801, 1930
PspPPI	RGGWCCY	1 cut(s)	1930
PstI	CTGCAG	1 cut(s)	37
PstNI	CAGNNNCTG	1 cut(s)	1745
PvuII	CAGCTG	1 cut(s)	1745
RsaI	GTAC	2 cut(s)	1068, 2043
RsaNI	GTAC	2 cut(s)	1067, 2042
SacI	GAGCTC	1 cut(s)	139
SaqAI	TTAA	5 cut(s)	519, 665, 675, 1038, 1653
SatI	GCNGC	9 cut(s)	36, 77, 80, 281, 747, 750, 1131, 1743, 2133
Sau3AI	GATC	2 cut(s)	1353, 1522
Sau96I	GGNCC	5 cut(s)	314, 1268, 1376, 1801, 1930
SchI	GAGTC	6 cut(s)	40, 398, 635, 1295, 1529, 1782
ScrFI	CCNGG	3 cut(s)	340, 359, 528
SduI	GDGCHC	1 cut(s)	139
SfaNI	GCATC	1 cut(s)	278
SfcI	CTRYAG	2 cut(s)	33, 1179
SfuI	TTCGAA	2 cut(s)	261, 711
SinI	GGWCC	4 cut(s)	314, 1376, 1801, 1930
SmlI	CTYRAG	2 cut(s)	1790, 2179
SmoI	CTYRAG	2 cut(s)	1790, 2179
SseBI	AGGCCT	1 cut(s)	239
SspI	AATATT	1 cut(s)	211
SspMI	CTAG	4 cut(s)	201, 947, 1236, 1920
SstI	GAGCTC	1 cut(s)	139
StuI	AGGCCT	1 cut(s)	239
StyD4I	CCNGG	3 cut(s)	338, 357, 526
TaaI	ACNGT	6 cut(s)	770, 1023, 1305, 1638, 1756, 1998
TaqII	GACCGA	3 cut(s)	302, 1193, 1282
TatI	WGTACW	1 cut(s)	2041
TauI	GCSGC	4 cut(s)	79, 82, 283, 2135
Tru1I	TTAA	5 cut(s)	519, 665, 675, 1038, 1653
Tru9I	TTAA	5 cut(s)	519, 665, 675, 1038, 1653
TscAI	CASTG	3 cut(s)	1026, 1056, 1641
TseFI	GTSAC	4 cut(s)	244, 401, 1660, 1780
TseI	GCWGC	5 cut(s)	35, 746, 749, 1130, 1742
Tsp45I	GTSAC	4 cut(s)	244, 401, 1660, 1780
TspDTI	ATGAA	6 cut(s)	918, 1020, 1419, 1785, 1973, 2024
TspGWI	ACGGA	2 cut(s)	14, 1749
TspRI	CASTG	3 cut(s)	1026, 1056, 1641
Van91I	CCANNNNNTGG	1 cut(s)	187
VpaK11BI	GGWCC	4 cut(s)	314, 1376, 1801, 1930
XapI	RAATTY	5 cut(s)	305, 661, 775, 1007, 1172
XbaI	TCTAGA	1 cut(s)	1235
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1811
XmiI	GTMKAC	1 cut(s)	1394
XmnI	GAANNNNTTC	2 cut(s)	1172, 1486
XspI	CTAG	4 cut(s)	201, 947, 1236, 1920

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.