translocase of chloroplast 159
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_4g18070 |
| malus_domestica | MD16G1168600.v1.1 |
| prunus_persica | Prupe.1G136400_v2.0.a1 |
| pyrus_communis | pycom16g14200 |
| rosa_chinensis | RchiOBHm_Chr4g0422301 |
| rosa_laevigata | RLG00000007622 |
| rosa_multiflora | Rmu_sc0013245.1_g000017 Rmu_sc0019605.1_g000001 |
| rosa_roxburghii | Rroxscaffold_5G00364390 |
| rosa_rugosa | Rorug04G0179100 |
| rosa_samantha | Rh4AG238400 Rh4BG241500 Rh4CG253400 Rh4DG237100 Rh4DG237200 |
| rosa_wichuraiana | Rw4G020630 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc36I | ACCTGC | 1 cut(s) | 544 |
| AccI | GTMKAC | 1 cut(s) | 2124 |
| AciI | CCGC | 2 cut(s) | 278, 678 |
| AclWI | GGATC | 3 cut(s) | 968, 981, 1788 |
| AcoI | YGGCCR | 2 cut(s) | 951, 1230 |
| AcsI | RAATTY | 5 cut(s) | 433, 736, 1025, 1255, 1891 |
| AcuI | CTGAAG | 5 cut(s) | 501, 894, 1338, 1574, 1608 |
| AcyI | GRCGYC | 1 cut(s) | 257 |
| AfaI | GTAC | 1 cut(s) | 1614 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 225, 1063, 2087 |
| AhlI | ACTAGT | 1 cut(s) | 191 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1659, 1691 |
| AleI | CACNNNNGTG | 1 cut(s) | 1746 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 648, 680 |
| Alw21I | GWGCWC | 2 cut(s) | 127, 172 |
| Alw26I | GTCTC | 2 cut(s) | 470, 1983 |
| AlwI | GGATC | 3 cut(s) | 968, 981, 1788 |
| Ama87I | CYCGRG | 1 cut(s) | 962 |
| AoxI | GGCC | 5 cut(s) | 266, 341, 422, 951, 1230 |
| ApeKI | GCWGC | 2 cut(s) | 35, 1592 |
| ApoI | RAATTY | 5 cut(s) | 433, 736, 1025, 1255, 1891 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 1038, 1070 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 1299, 1892 |
| AspLEI | GCGC | 2 cut(s) | 1578, 2087 |
| AspS9I | GGNCC | 4 cut(s) | 267, 404, 423, 1909 |
| AsuHPI | GGTGA | 8 cut(s) | 302, 692, 953, 1613, 1694, 1760, 1819, 1856 |
| AvaI | CYCGRG | 1 cut(s) | 962 |
| AvaII | GGWCC | 2 cut(s) | 404, 1909 |
| BalI | TGGCCA | 1 cut(s) | 953 |
| BamHI | GGATCC | 1 cut(s) | 973 |
| BanII | GRGCYC | 1 cut(s) | 127 |
| BbsI | GAAGAC | 1 cut(s) | 1946 |
| Bbv12I | GWGCWC | 2 cut(s) | 127, 172 |
| BbvCI | CCTCAGC | 1 cut(s) | 879 |
| BbvI | GCAGC | 2 cut(s) | 47, 1579 |
| BccI | CCATC | 4 cut(s) | 446, 1180, 1598, 1804 |
| BceAI | ACGGC | 1 cut(s) | 270 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1702, 1736 |
| BcoDI | GTCTC | 2 cut(s) | 470, 1983 |
| BcuI | ACTAGT | 1 cut(s) | 191 |
| BfaI | CTAG | 5 cut(s) | 87, 137, 192, 570, 1917 |
| BfmI | CTRYAG | 1 cut(s) | 33 |
| BfuAI | ACCTGC | 1 cut(s) | 544 |
| BisI | GCNGC | 2 cut(s) | 36, 1593 |
| BlsI | GCNGC | 2 cut(s) | 37, 1594 |
| Bme18I | GGWCC | 2 cut(s) | 404, 1909 |
| BmeT110I | CYCGRG | 1 cut(s) | 962 |
| BmgT120I | GGNCC | 4 cut(s) | 267, 404, 423, 1909 |
| BmiI | GGNNCC | 6 cut(s) | 62, 217, 975, 1198, 1353, 1861 |
| BmrI | ACTGGG | 1 cut(s) | 1299 |
| BmsI | GCATC | 3 cut(s) | 451, 1003, 1744 |
| BmuI | ACTGGG | 1 cut(s) | 1299 |
| BpiI | GAAGAC | 1 cut(s) | 1946 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 299, 331 |
| BpmI | CTGGAG | 3 cut(s) | 1029, 1746, 1845 |
| Bpu10I | CCTNAGC | 1 cut(s) | 879 |
| BpuEI | CTTGAG | 3 cut(s) | 1046, 1754, 1865 |
| BsaHI | GRCGYC | 1 cut(s) | 257 |
| BsaJI | CCNNGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| BsaWI | WCCGGW | 1 cut(s) | 1763 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 648, 678, 1719, 1749 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 225, 1063, 2087 |
| Bse118I | RCCGGY | 1 cut(s) | 1228 |
| Bse1I | ACTGG | 5 cut(s) | 711, 1012, 1294, 1653, 1872 |
| Bse3DI | GCAATG | 2 cut(s) | 426, 1841 |
| BseDI | CCNNGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| BseGI | GGATG | 3 cut(s) | 823, 832, 1759 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 225, 1063, 2087 |
| BseMI | GCAATG | 2 cut(s) | 426, 1841 |
| BseMII | CTCAG | 6 cut(s) | 63, 576, 696, 839, 870, 1215 |
| BseNI | ACTGG | 5 cut(s) | 711, 1012, 1294, 1653, 1872 |
| BseRI | GAGGAG | 3 cut(s) | 488, 1189, 1479 |
| BseXI | GCAGC | 2 cut(s) | 47, 1579 |
| BseYI | CCCAGC | 1 cut(s) | 1595 |
| BshFI | GGCC | 5 cut(s) | 268, 343, 424, 953, 1232 |
| BsiHKAI | GWGCWC | 2 cut(s) | 127, 172 |
| BsiHKCI | CYCGRG | 1 cut(s) | 962 |
| BsiSI | CCGG | 2 cut(s) | 1229, 1764 |
| BslFI | GGGAC | 1 cut(s) | 1040 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 225, 1063, 2087 |
| BsmAI | GTCTC | 2 cut(s) | 470, 1983 |
| BsmFI | GGGAC | 1 cut(s) | 1040 |
| BsmI | GAATGC | 1 cut(s) | 680 |
| BsnI | GGCC | 5 cut(s) | 268, 343, 424, 953, 1232 |
| BsoBI | CYCGRG | 1 cut(s) | 962 |
| Bsp1286I | GDGCHC | 2 cut(s) | 127, 172 |
| Bsp143I | GATC | 3 cut(s) | 973, 1557, 1780 |
| BspACI | CCGC | 2 cut(s) | 278, 678 |
| BspANI | GGCC | 5 cut(s) | 268, 343, 424, 953, 1232 |
| BspCNI | CTCAG | 6 cut(s) | 62, 577, 697, 840, 871, 1216 |
| BspHI | TCATGA | 2 cut(s) | 172, 1212 |
| BspLI | GGNNCC | 6 cut(s) | 62, 217, 975, 1198, 1353, 1861 |
| BspMAI | CTGCAG | 1 cut(s) | 37 |
| BspMI | ACCTGC | 1 cut(s) | 544 |
| BspPI | GGATC | 3 cut(s) | 968, 981, 1788 |
| BsrDI | GCAATG | 2 cut(s) | 426, 1841 |
| BsrFI | RCCGGY | 1 cut(s) | 1228 |
| BsrI | ACTGG | 5 cut(s) | 711, 1012, 1294, 1653, 1872 |
| BssAI | RCCGGY | 1 cut(s) | 1228 |
| BssECI | CCNNGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| BssMI | GATC | 3 cut(s) | 973, 1557, 1780 |
| BssNI | GRCGYC | 1 cut(s) | 257 |
| BssT1I | CCWWGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| Bst4CI | ACNGT | 4 cut(s) | 167, 1617, 1735, 1977 |
| Bst6I | CTCTTC | 5 cut(s) | 117, 237, 300, 777, 1383 |
| BstACI | GRCGYC | 1 cut(s) | 257 |
| BstC8I | GCNNGC | 2 cut(s) | 78, 1230 |
| BstDEI | CTNAG | 7 cut(s) | 49, 585, 705, 848, 879, 937, 1224 |
| BstF5I | GGATG | 3 cut(s) | 823, 832, 1759 |
| BstHHI | GCGC | 2 cut(s) | 1578, 2087 |
| BstKTI | GATC | 3 cut(s) | 976, 1560, 1783 |
| BstMAI | GTCTC | 2 cut(s) | 470, 1983 |
| BstMBI | GATC | 3 cut(s) | 973, 1557, 1780 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 1225, 1820, 1859 |
| BstNSI | RCATGY | 1 cut(s) | 1857 |
| BstSFI | CTRYAG | 1 cut(s) | 33 |
| BstV1I | GCAGC | 2 cut(s) | 47, 1579 |
| BstV2I | GAAGAC | 1 cut(s) | 1946 |
| BstX2I | RGATCY | 1 cut(s) | 973 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1381 |
| BstYI | RGATCY | 1 cut(s) | 973 |
| BsuRI | GGCC | 5 cut(s) | 268, 343, 424, 953, 1232 |
| BtsCI | GGATG | 3 cut(s) | 823, 832, 1759 |
| BtsI | GCAGTG | 2 cut(s) | 471, 1042 |
| BtsIMutI | CAGTG | 5 cut(s) | 471, 718, 954, 1042, 1660 |
| BveI | ACCTGC | 1 cut(s) | 544 |
| Cac8I | GCNNGC | 2 cut(s) | 78, 1230 |
| CciI | TCATGA | 2 cut(s) | 172, 1212 |
| CfoI | GCGC | 2 cut(s) | 1578, 2087 |
| Cfr10I | RCCGGY | 1 cut(s) | 1228 |
| Cfr13I | GGNCC | 4 cut(s) | 267, 404, 423, 1909 |
| CseI | GACGC | 1 cut(s) | 246 |
| Csp6I | GTAC | 1 cut(s) | 1613 |
| CviAII | CATG | 9 cut(s) | 173, 441, 521, 797, 1130, 1213, 1664, 1854, 2015 |
| CviQI | GTAC | 1 cut(s) | 1613 |
| DdeI | CTNAG | 7 cut(s) | 49, 585, 705, 848, 879, 937, 1224 |
| DpnI | GATC | 3 cut(s) | 975, 1559, 1782 |
| DpnII | GATC | 3 cut(s) | 973, 1557, 1780 |
| EaeI | YGGCCR | 2 cut(s) | 951, 1230 |
| Eam1104I | CTCTTC | 5 cut(s) | 117, 237, 300, 777, 1383 |
| EarI | CTCTTC | 5 cut(s) | 117, 237, 300, 777, 1383 |
| Ecl136II | GAGCTC | 1 cut(s) | 125 |
| Eco130I | CCWWGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| Eco24I | GRGCYC | 1 cut(s) | 127 |
| Eco47I | GGWCC | 2 cut(s) | 404, 1909 |
| Eco53kI | GAGCTC | 1 cut(s) | 125 |
| Eco57I | CTGAAG | 5 cut(s) | 501, 894, 1338, 1574, 1608 |
| Eco88I | CYCGRG | 1 cut(s) | 962 |
| EcoICRI | GAGCTC | 1 cut(s) | 125 |
| EcoO109I | RGGNCCY | 1 cut(s) | 267 |
| EcoRI | GAATTC | 1 cut(s) | 1255 |
| EcoT14I | CCWWGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| EcoT38I | GRGCYC | 1 cut(s) | 127 |
| ErhI | CCWWGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| FaeI | CATG | 9 cut(s) | 176, 444, 524, 800, 1133, 1216, 1667, 1857, 2018 |
| FaqI | GGGAC | 1 cut(s) | 1040 |
| FatI | CATG | 9 cut(s) | 172, 440, 520, 796, 1129, 1212, 1663, 1853, 2014 |
| FblI | GTMKAC | 1 cut(s) | 2124 |
| Fnu4HI | GCNGC | 2 cut(s) | 36, 1593 |
| FokI | GGATG | 3 cut(s) | 830, 839, 1766 |
| FriOI | GRGCYC | 1 cut(s) | 127 |
| Fsp4HI | GCNGC | 2 cut(s) | 36, 1593 |
| FspBI | CTAG | 5 cut(s) | 87, 137, 192, 570, 1917 |
| GlaI | GCGC | 2 cut(s) | 1577, 2086 |
| GluI | GCNGC | 2 cut(s) | 36, 1593 |
| GsaI | CCCAGC | 1 cut(s) | 1599 |
| GsuI | CTGGAG | 3 cut(s) | 1029, 1746, 1845 |
| HaeIII | GGCC | 5 cut(s) | 268, 343, 424, 953, 1232 |
| HapII | CCGG | 2 cut(s) | 1229, 1764 |
| HgaI | GACGC | 1 cut(s) | 246 |
| HhaI | GCGC | 2 cut(s) | 1578, 2087 |
| Hin1I | GRCGYC | 1 cut(s) | 257 |
| Hin1II | CATG | 9 cut(s) | 176, 444, 524, 800, 1133, 1216, 1667, 1857, 2018 |
| Hin6I | GCGC | 2 cut(s) | 1576, 2085 |
| HinP1I | GCGC | 2 cut(s) | 1576, 2085 |
| HindIII | AAGCTT | 1 cut(s) | 74 |
| HpaII | CCGG | 2 cut(s) | 1229, 1764 |
| HphI | GGTGA | 8 cut(s) | 302, 692, 953, 1613, 1694, 1760, 1819, 1856 |
| Hpy166II | GTNNAC | 1 cut(s) | 2125 |
| Hpy188III | TCNNGA | 8 cut(s) | 51, 137, 173, 964, 1213, 1771, 1882, 2142 |
| Hpy8I | GTNNAC | 1 cut(s) | 2125 |
| HpyCH4III | ACNGT | 4 cut(s) | 167, 1617, 1735, 1977 |
| HpyCH4V | TGCA | 8 cut(s) | 35, 80, 431, 464, 796, 1127, 1834, 2114 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 1225, 1820, 1859 |
| HpyF3I | CTNAG | 7 cut(s) | 49, 585, 705, 848, 879, 937, 1224 |
| Hsp92I | GRCGYC | 1 cut(s) | 257 |
| Hsp92II | CATG | 9 cut(s) | 176, 444, 524, 800, 1133, 1216, 1667, 1857, 2018 |
| HspAI | GCGC | 2 cut(s) | 1576, 2085 |
| KroI | GCCGGC | 1 cut(s) | 1228 |
| KroNI | GCCGGC | 1 cut(s) | 1230 |
| Kzo9I | GATC | 3 cut(s) | 973, 1557, 1780 |
| LmnI | GCTCC | 4 cut(s) | 53, 1202, 1826, 1859 |
| Lsp1109I | GCAGC | 2 cut(s) | 47, 1579 |
| LweI | GCATC | 3 cut(s) | 451, 1003, 1744 |
| MaeI | CTAG | 5 cut(s) | 87, 137, 192, 570, 1917 |
| MaeIII | GTNAC | 7 cut(s) | 200, 836, 1073, 1657, 1729, 1735, 1960 |
| MalI | GATC | 3 cut(s) | 975, 1559, 1782 |
| MboI | GATC | 3 cut(s) | 973, 1557, 1780 |
| MfeI | CAATTG | 1 cut(s) | 2109 |
| MflI | RGATCY | 1 cut(s) | 973 |
| MhlI | GDGCHC | 2 cut(s) | 127, 172 |
| MlsI | TGGCCA | 1 cut(s) | 953 |
| MluNI | TGGCCA | 1 cut(s) | 953 |
| MmeI | TCCRAC | 1 cut(s) | 1972 |
| Mox20I | TGGCCA | 1 cut(s) | 953 |
| MroNI | GCCGGC | 1 cut(s) | 1228 |
| MroXI | GAANNNNTTC | 2 cut(s) | 1299, 1892 |
| MscI | TGGCCA | 1 cut(s) | 953 |
| MseI | TTAA | 4 cut(s) | 525, 624, 912, 1241 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1746 |
| Msp20I | TGGCCA | 1 cut(s) | 953 |
| MspI | CCGG | 2 cut(s) | 1229, 1764 |
| MunI | CAATTG | 1 cut(s) | 2109 |
| Mva1269I | GAATGC | 1 cut(s) | 680 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 1225, 1820, 1859 |
| NaeI | GCCGGC | 1 cut(s) | 1230 |
| NdeII | GATC | 3 cut(s) | 973, 1557, 1780 |
| NgoMIV | GCCGGC | 1 cut(s) | 1228 |
| NlaIII | CATG | 9 cut(s) | 176, 444, 524, 800, 1133, 1216, 1667, 1857, 2018 |
| NlaIV | GGNNCC | 6 cut(s) | 62, 217, 975, 1198, 1353, 1861 |
| NmuCI | GTSAC | 1 cut(s) | 1657 |
| NspI | RCATGY | 1 cut(s) | 1857 |
| OliI | CACNNNNGTG | 1 cut(s) | 1746 |
| PaeR7I | CTCGAG | 1 cut(s) | 962 |
| PagI | TCATGA | 2 cut(s) | 172, 1212 |
| PctI | GAATGC | 1 cut(s) | 680 |
| PdiI | GCCGGC | 1 cut(s) | 1230 |
| PdmI | GAANNNNTTC | 2 cut(s) | 1299, 1892 |
| PkrI | GCNGC | 2 cut(s) | 37, 1594 |
| Psp124BI | GAGCTC | 1 cut(s) | 127 |
| PspFI | CCCAGC | 1 cut(s) | 1595 |
| PspN4I | GGNNCC | 6 cut(s) | 62, 217, 975, 1198, 1353, 1861 |
| PspPI | GGNCC | 4 cut(s) | 267, 404, 423, 1909 |
| PstI | CTGCAG | 1 cut(s) | 37 |
| PsuI | RGATCY | 1 cut(s) | 973 |
| RsaI | GTAC | 1 cut(s) | 1614 |
| RsaNI | GTAC | 1 cut(s) | 1613 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1746 |
| SacI | GAGCTC | 1 cut(s) | 127 |
| SaqAI | TTAA | 4 cut(s) | 525, 624, 912, 1241 |
| SatI | GCNGC | 2 cut(s) | 36, 1593 |
| Sau3AI | GATC | 3 cut(s) | 973, 1557, 1780 |
| Sau96I | GGNCC | 4 cut(s) | 267, 404, 423, 1909 |
| SduI | GDGCHC | 2 cut(s) | 127, 172 |
| SfaNI | GCATC | 3 cut(s) | 451, 1003, 1744 |
| SfcI | CTRYAG | 1 cut(s) | 33 |
| Sfr274I | CTCGAG | 1 cut(s) | 962 |
| SinI | GGWCC | 2 cut(s) | 404, 1909 |
| SlaI | CTCGAG | 1 cut(s) | 962 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1746 |
| SmlI | CTYRAG | 4 cut(s) | 962, 1061, 1769, 1880 |
| SmoI | CTYRAG | 4 cut(s) | 962, 1061, 1769, 1880 |
| SpeI | ACTAGT | 1 cut(s) | 191 |
| SsiI | CCGC | 2 cut(s) | 278, 678 |
| SspMI | CTAG | 5 cut(s) | 87, 137, 192, 570, 1917 |
| SstI | GAGCTC | 1 cut(s) | 127 |
| StyI | CCWWGG | 5 cut(s) | 615, 926, 1347, 1689, 1840 |
| TaaI | ACNGT | 4 cut(s) | 167, 1617, 1735, 1977 |
| TaqI | TCGA | 2 cut(s) | 25, 963 |
| TatI | WGTACW | 1 cut(s) | 1612 |
| Tru1I | TTAA | 4 cut(s) | 525, 624, 912, 1241 |
| Tru9I | TTAA | 4 cut(s) | 525, 624, 912, 1241 |
| TscAI | CASTG | 5 cut(s) | 471, 718, 961, 1042, 1660 |
| TseFI | GTSAC | 1 cut(s) | 1657 |
| TseI | GCWGC | 2 cut(s) | 35, 1592 |
| Tsp45I | GTSAC | 1 cut(s) | 1657 |
| TspGWI | ACGGA | 3 cut(s) | 796, 1532, 2126 |
| TspRI | CASTG | 5 cut(s) | 471, 718, 961, 1042, 1660 |
| VpaK11BI | GGWCC | 2 cut(s) | 404, 1909 |
| XapI | RAATTY | 5 cut(s) | 433, 736, 1025, 1255, 1891 |
| XbaI | TCTAGA | 1 cut(s) | 136 |
| XceI | RCATGY | 1 cut(s) | 1857 |
| XhoI | CTCGAG | 1 cut(s) | 962 |
| XmiI | GTMKAC | 1 cut(s) | 2124 |
| XmnI | GAANNNNTTC | 2 cut(s) | 1299, 1892 |
| XspI | CTAG | 5 cut(s) | 87, 137, 192, 570, 1917 |