Prupe.1G160600_v2.0.a1

beta-galactosidase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0014328
Physical Location & Seq
Reverse (-)
12802787 .. 12817862
15076 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G160600.1

Sequence Viewer

Length: 2691 bp
ATGGTTGCCCAAACAGGCAGGCTTTGGATTCGATGTGTGTTGTTACTCTGCCTGGCAATTCAGTTTGCTTTGTTCGCCGCCGCCGAGACGTTCTTCAAGCCATTCAACGTGAGCTACGACCACAGAGCTCTGATCATCGATGGAAAGCGCCGCATGCTCATATCTGCTGGCATCCACTACCCTCGCGCCACTCCCGAGATGTGGCCTGATCTGATTTCAAAGAGTAAGGAAGGTGGGGCAGATGTGATCCAAACTTATGCATTTTGGAGTGGCCATGAGCCCAAGAGAGGACAGTACAACTTTGAGGGGAGATATGACATCGTCAAGTTTGCAAATTTAGTGGGAGCCAGTGGACTTTATCTCCATCTACGCATAGGCCCTTATGTCTGCGCTGAGTGGAATTTTGGAGGCTTCCCAGTGTGGTTGCGTGACATCCCTGGAATAGAGTTTCGAACAGACAATGCGCCTTTTAAGGAGGAAATGCAGCGTTTTGTTAAAAAGATGGTGGATCTGATGCGAGAGGAAAAACTATTTTCTTGGCAAGGTGGTCCAATTATTATGCTGCAGATTGAAAATGAATATGGAAATATTGAAAGCTCATTTGGCCAGAAAGGGAAAGAATATGTGAAGTGGGCTGCTGAGATGGCTCTAGGTCTCGGTGCTGGGGTTCCATGGGTCATGTGCAAGCAAGTTGATGCTCCAGGAAGTGTTATAGATGCATGCAATGGATATTATTGCGATGGTTACAGGCCAAATTCCTATAACAAACCAACACTGTGGACAGAAGATTGGGATGGATGGTATGCGTCATGGGGTGGAAGATTACCTCACAGGCCTGTTGAAGATCTTGCATTTGCAGTAGCACGCTTTTACCAACGCGGAGGGAGCTTTCAGAATTATTATATGTATTTTGGTGGAACAAACTTTGGACGGACTTCTGGGGGCCCCTTTTATATTACCAGTTATGATTATGATGCTCCAATTGATGAATATGGTCTGCTGAGTGACCCTAAATGGGGACATTTGAAGGATCTACATGCTGCTATAAAGCTCTGTGAACCTGCTCTTGTTGCTGCTGATTCACCGCATTATATAAAATTGGGACCAAACCAAGAGGCACATGTATACCGTATGAAAGCTCACCATGAAGGCCTGAACTTTACTTGGTATGGAACTCAAATCAGTTGCTCCGCATTCCTCGCAAACATCGATCAACATAAAGCAGCTTCTGTAACATTTCTTGGTCAAAAGTATAACCTACCACCATGGTCAGTCAGTATTTTGCCAGACTGCCGGAACGTGGTGTTCAACACTGCCAAGGTTGGGGCACAAACTACCATCAAACGTGTAGAGTTTGATTTGCCTCTTTACTCAGGTATATCTACACGACAACAACTCATTACCAAGAATGAAGATTTGTTTATCACCAAATCGTGGATGACTGTAAAGGAGCCAATCAATGTTTGGAGTGAGAATAATTTTACAGTTCAAGGAATATTGGAGCATTTAAATGTGACGAAAGACCTTTCTGATTATCTCTGGCATATAACCAGAATCTTTGTTTCAGATGATGACATCTCCTTTTGGGAGGAAAGCAAGATTAGTCCAGCAGTTGCAATTGATAGCATGCGTGATGTGTTACGCATATTTGTTAATGGTCAGCTTACAGGCAGTATCATCGGTCATTGGGTCAAGGTGGAGCAACCTGTTAAGTTTCTCAAGGGATACAATGATTTGGTGTTGTTATCTCAGACAGTGGGATTGCAGAACTATGGTGCTTTATTGGAGAGAGATGGGGCTGGATTCAGAGGACAGGTTAAACTAACCGGCTTTAAAAATGGGGATGTTGACCTCACAAAGTTGTTATGGACTTACCAGGTTGGGCTTAAGGGTGAGTTCTTGAAAATATACACCATAGAAGAAAATGAGAAGGCAGGTTGGGCTGAGCTGTCACTGGATGCTTATCCATCCACATTTACCTGGTACAAGCAGACATACTTCGACAACCCTGCTGGCACAGATCCAGTTGCTCTTGATTTAGGAAGCATGGGAAAGGGCCAGGCTTGGGTCAACGGCCACCATATAGGAAGATATTGGACACTTGTTGCTCCAAAGGATGGATGCCAAGAAATCTGTGATTATCGTGGGGCATACAACTCCAATAAGTGCTCAACCAATTGCGGGAAGCCTACTCAAACCTGGTACCACATACCACGGTCATGGTTACAGGCTTCCAGTAATTTACTTGTTATCTTGGAGGAAACTGGAGGGAATCCATTTGAGATTTCAATCAAGTTGCGTGCAACCCGGGTCATCTGTGCTCAAGTGTCAGAGTCTCACTACCCACCTGTCCAGAAGTGGTTCGATCCAGACTTTATTGATGGAAAAATTGCAGTAAATGATCTGAGACCAGAAATGCATTTGCAGTGTCAAGATGGGATGATGATCACTTCCATAGAATTTGCTAGCTATGGAACTCCTCAAGGTAGCTGCCAGAGCTTTGCTAGAGGCAATTGTCATGCAGCCAATTCATTGTCCATAGTCTCTGAGGGTTGTCTGGGAAAGAATAGCTGTTCAATTGGGATATCAAACCTTATATTTGGATCTGACCCATGCCGAGGTGTTATTAAGACGCTGGCAGTTGAGGCAAGATGCAGGTCTTTACCAAATGCTGGTTTTTCTCAGTTCTGA

Protein Analysis

897

Amino Acids

100.86

Weight (kDa)

6.42

Isoelectric Point (pI)

35.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014328)

Species Orthologous Gene IDs
arabidopsis_thaliana AT2G32810 AT2G32810
fragaria_vesca FvH4_4g13490
malus_domestica MD13G1283100.v1.1
prunus_persica Prupe.1G160600_v2.0.a1 Prupe.1G160600_v2.0.a1
pyrus_communis pycom420g01190
rosa_chinensis RchiOBHm_Chr4g0414111
rosa_laevigata RLG00000008175
rosa_multiflora Rmu_sc0003264.1_g000008
rosa_roxburghii Rroxscaffold_5G00358040
rosa_rugosa Rorug04G0125600 Rorug04G0125700
rosa_samantha Rh4AG184200 Rh4BG183700 Rh4DG179600
rosa_wichuraiana Rw4G015680

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 3 cut(s) 1069, 1925, 2646
Acc65I GGTACC 1 cut(s) 2202
AccB1I GGYRCC 1 cut(s) 2202
AccB7I CCANNNNNTGG 3 cut(s) 1434, 2117, 2672
AccI GTMKAC 1 cut(s) 1125
AccII CGCG 2 cut(s) 186, 879
AciI CCGC 7 cut(s) 78, 81, 151, 879, 1085, 1191, 2181
AclWI GGATC 6 cut(s) 241, 516, 1038, 2015, 2360, 2611
AcoI YGGCCR 3 cut(s) 271, 604, 2074
AcsI RAATTY 4 cut(s) 334, 400, 754, 2459
AfaI GTAC 3 cut(s) 296, 1985, 2204
AflII CTTAAG 1 cut(s) 1886
AflIII ACRYGT 2 cut(s) 1120, 1345
AjnI CCWGG 7 cut(s) 51, 436, 700, 1875, 1979, 2058, 2198
AjuI GAANNNNNNNTTGG 2 cut(s) 585, 617
Alw21I GWGCWC 3 cut(s) 130, 2171, 2323
Alw26I GTCTC 5 cut(s) 80, 659, 2340, 2401, 2548
AlwI GGATC 6 cut(s) 241, 516, 1038, 2015, 2360, 2611
AlwNI CAGNNNCTG 1 cut(s) 1229
Ama87I CYCGRG 2 cut(s) 194, 2307
ApaI GGGCCC 1 cut(s) 947
ApeKI GCWGC 8 cut(s) 484, 562, 635, 1040, 1073, 1223, 2490, 2522
ApoI RAATTY 4 cut(s) 334, 400, 754, 2459
Asp700I GAANNNNTTC 1 cut(s) 2360
Asp718I GGTACC 1 cut(s) 2202
AspLEI GCGC 4 cut(s) 150, 188, 392, 466
AspS9I GGNCC 6 cut(s) 377, 548, 943, 944, 1103, 2056
AsuC2I CCSGG 2 cut(s) 2308, 2309
AsuHPI GGTGA 4 cut(s) 1074, 1133, 1417, 1904
AsuII TTCGAA 1 cut(s) 451
AsuNHI GCTAGC 1 cut(s) 2465
AvaI CYCGRG 2 cut(s) 194, 2307
AvaII GGWCC 2 cut(s) 548, 1103
BaeGI GKGCMC 2 cut(s) 947, 1330
BalI TGGCCA 2 cut(s) 273, 606
BanI GGYRCC 1 cut(s) 2202
BanII GRGCYC 3 cut(s) 130, 282, 947
Bbv12I GWGCWC 3 cut(s) 130, 2171, 2323
BbvI GCAGC 8 cut(s) 496, 549, 622, 1027, 1060, 1235, 2477, 2534
BceAI ACGGC 1 cut(s) 2089
BcgI CGANNNNNNTGC 4 cut(s) 1660, 1694, 1991, 2025
BciT130I CCWGG 7 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200
BciVI GTATCC 1 cut(s) 1718
BclI TGATCA 2 cut(s) 132, 2445
BcnI CCSGG 2 cut(s) 2308, 2309
BcoDI GTCTC 5 cut(s) 80, 659, 2340, 2401, 2548
BfaI CTAG 3 cut(s) 650, 2466, 2505
BfmI CTRYAG 1 cut(s) 563
BfoI RGCGCY 1 cut(s) 151
BfrI CTTAAG 1 cut(s) 1886
BfuAI ACCTGC 3 cut(s) 1069, 1925, 2646
BfuI GTATCC 1 cut(s) 1718
BglII AGATCT 1 cut(s) 844
BlpI GCTNAGC 1 cut(s) 1944
Bme1390I CCNGG 9 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200, 2308, 2309
Bme18I GGWCC 2 cut(s) 548, 1103
BmeT110I CYCGRG 2 cut(s) 194, 2307
BmgT120I GGNCC 6 cut(s) 377, 548, 943, 944, 1103, 2056
BmiI GGNNCC 8 cut(s) 346, 669, 944, 945, 946, 1104, 1452, 2204
BmrFI CCNGG 9 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200, 2308, 2309
BmrI ACTGGG 1 cut(s) 410
BmsI GCATC 8 cut(s) 180, 504, 685, 706, 964, 1948, 2111, 2642
BmtI GCTAGC 1 cut(s) 2469
BmuI ACTGGG 1 cut(s) 410
BpmI CTGGAG 2 cut(s) 684, 2286
Bpu1102I GCTNAGC 1 cut(s) 1944
Bpu14I TTCGAA 1 cut(s) 451
BpuEI CTTGAG 3 cut(s) 1703, 2307, 2466
BpuMI CCSGG 2 cut(s) 2308, 2309
Bsa29I ATCGAT 2 cut(s) 138, 1209
BsaBI GATNNNNATC 3 cut(s) 1962, 2288, 2444
BsaI GGTCTC 2 cut(s) 659, 2401
BsaJI CCNNGG 7 cut(s) 436, 671, 1265, 1317, 2213, 2307, 2617
BsaXI ACNNNNNCTCC 2 cut(s) 345, 375
Bse118I RCCGGY 1 cut(s) 1826
Bse1I ACTGG 7 cut(s) 348, 416, 960, 1959, 2024, 2235, 2269
Bse3DI GCAATG 1 cut(s) 730
Bse8I GATNNNNATC 3 cut(s) 1962, 2288, 2444
BseBI CCWGG 7 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200
BseCI ATCGAT 2 cut(s) 138, 1209
BseDI CCNNGG 7 cut(s) 436, 671, 1265, 1317, 2213, 2307, 2617
BseJI GATNNNNATC 3 cut(s) 1962, 2288, 2444
BseMI GCAATG 1 cut(s) 730
BseMII CTCAG 8 cut(s) 384, 630, 992, 1386, 1763, 1935, 2396, 2538
BseNI ACTGG 7 cut(s) 348, 416, 960, 1959, 2024, 2235, 2269
BseRI GAGGAG 1 cut(s) 2469
BseSI GKGCMC 2 cut(s) 947, 1330
BseXI GCAGC 8 cut(s) 496, 549, 622, 1027, 1060, 1235, 2477, 2534
BseYI CCCAGC 1 cut(s) 662
Bsh1236I CGCG 2 cut(s) 186, 879
BshNI GGYRCC 1 cut(s) 2202
BshVI ATCGAT 2 cut(s) 138, 1209
BsiHKAI GWGCWC 3 cut(s) 130, 2171, 2323
BsiHKCI CYCGRG 2 cut(s) 194, 2307
BsiSI CCGG 3 cut(s) 1294, 1827, 2308
BslFI GGGAC 2 cut(s) 1032, 1116
BsmAI GTCTC 5 cut(s) 80, 659, 2340, 2401, 2548
BsmBI CGTCTC 1 cut(s) 80
BsmFI GGGAC 2 cut(s) 1032, 1116
BsmI GAATGC 1 cut(s) 1193
Bso31I GGTCTC 2 cut(s) 659, 2401
BsoBI CYCGRG 2 cut(s) 194, 2307
Bsp119I TTCGAA 1 cut(s) 451
Bsp120I GGGCCC 1 cut(s) 943
Bsp1286I GDGCHC 6 cut(s) 130, 282, 947, 1330, 2171, 2323
Bsp1720I GCTNAGC 1 cut(s) 1944
Bsp19I CCATGG 2 cut(s) 671, 1265
BspACI CCGC 7 cut(s) 78, 81, 151, 879, 1085, 1191, 2181
BspCNI CTCAG 8 cut(s) 385, 631, 993, 1385, 1762, 1936, 2397, 2539
BspDI ATCGAT 2 cut(s) 138, 1209
BspFNI CGCG 2 cut(s) 186, 879
BspLI GGNNCC 8 cut(s) 346, 669, 944, 945, 946, 1104, 1452, 2204
BspMAI CTGCAG 1 cut(s) 567
BspMI ACCTGC 3 cut(s) 1069, 1925, 2646
BspOI GCTAGC 1 cut(s) 2469
BspPI GGATC 6 cut(s) 241, 516, 1038, 2015, 2360, 2611
BspT104I TTCGAA 1 cut(s) 451
BspT107I GGYRCC 1 cut(s) 2202
BspTI CTTAAG 1 cut(s) 1886
BspTNI GGTCTC 2 cut(s) 659, 2401
BsrDI GCAATG 1 cut(s) 730
BsrFI RCCGGY 1 cut(s) 1826
BsrI ACTGG 7 cut(s) 348, 416, 960, 1959, 2024, 2235, 2269
BssAI RCCGGY 1 cut(s) 1826
BssECI CCNNGG 7 cut(s) 436, 671, 1265, 1317, 2213, 2307, 2617
BssNAI GTATAC 1 cut(s) 1126
BssT1I CCWWGG 3 cut(s) 671, 1265, 1317
Bst1107I GTATAC 1 cut(s) 1126
Bst2UI CCWGG 7 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200
Bst4CI ACNGT 7 cut(s) 294, 777, 1130, 1444, 1486, 1756, 2217
BstAFI CTTAAG 1 cut(s) 1886
BstBI TTCGAA 1 cut(s) 451
BstDEI CTNAG 9 cut(s) 393, 639, 1001, 1372, 1749, 1944, 2405, 2547, 2682
BstDSI CCRYGG 3 cut(s) 671, 1265, 2213
BstFNI CGCG 2 cut(s) 186, 879
BstH2I RGCGCY 1 cut(s) 151
BstHHI GCGC 4 cut(s) 150, 188, 392, 466
BstMAI GTCTC 5 cut(s) 80, 659, 2340, 2401, 2548
BstNI CCWGG 7 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200
BstNSI RCATGY 5 cut(s) 157, 723, 1040, 1124, 1630
BstSCI CCNGG 9 cut(s) 51, 436, 700, 1875, 1979, 2058, 2198, 2306, 2307
BstSFI CTRYAG 1 cut(s) 563
BstSLI GKGCMC 2 cut(s) 947, 1330
BstUI CGCG 2 cut(s) 186, 879
BstV1I GCAGC 8 cut(s) 496, 549, 622, 1027, 1060, 1235, 2477, 2534
BstX2I RGATCY 5 cut(s) 508, 844, 1030, 2020, 2603
BstXI CCANNNNNNTGG 2 cut(s) 777, 2220
BstYI RGATCY 5 cut(s) 508, 844, 1030, 2020, 2603
BstZ17I GTATAC 1 cut(s) 1126
Bsu15I ATCGAT 2 cut(s) 138, 1209
BsuI GTATCC 1 cut(s) 1718
BsuTUI ATCGAT 2 cut(s) 138, 1209
BtgI CCRYGG 3 cut(s) 671, 1265, 2213
BtgZI GCGATG 1 cut(s) 753
BtsI GCAGTG 2 cut(s) 1311, 2432
BtsIMutI CAGTG 7 cut(s) 355, 423, 773, 1311, 1761, 1952, 2432
BveI ACCTGC 3 cut(s) 1069, 1925, 2646
CaiI CAGNNNCTG 1 cut(s) 1229
CfoI GCGC 4 cut(s) 150, 188, 392, 466
Cfr10I RCCGGY 1 cut(s) 1826
Cfr13I GGNCC 6 cut(s) 377, 548, 943, 944, 1103, 2056
Cfr9I CCCGGG 1 cut(s) 2307
ClaI ATCGAT 2 cut(s) 138, 1209
CseI GACGC 2 cut(s) 795, 2641
CsiI ACCWGGT 3 cut(s) 1875, 1979, 2198
Csp6I GTAC 3 cut(s) 295, 1984, 2203
CspCI CAANNNNNGTGG 2 cut(s) 321, 356
CviQI GTAC 3 cut(s) 295, 1984, 2203
DdeI CTNAG 9 cut(s) 393, 639, 1001, 1372, 1749, 1944, 2405, 2547, 2682
DraI TTTAAA 2 cut(s) 1509, 1834
EaeI YGGCCR 3 cut(s) 271, 604, 2074
Ecl136II GAGCTC 1 cut(s) 128
Eco130I CCWWGG 3 cut(s) 671, 1265, 1317
Eco147I AGGCCT 2 cut(s) 835, 1152
Eco24I GRGCYC 3 cut(s) 130, 282, 947
Eco31I GGTCTC 2 cut(s) 659, 2401
Eco32I GATATC 1 cut(s) 2586
Eco47I GGWCC 2 cut(s) 548, 1103
Eco53kI GAGCTC 1 cut(s) 128
Eco88I CYCGRG 2 cut(s) 194, 2307
EcoICRI GAGCTC 1 cut(s) 128
EcoO109I RGGNCCY 3 cut(s) 377, 943, 944
EcoRII CCWGG 7 cut(s) 51, 436, 700, 1875, 1979, 2058, 2198
EcoRV GATATC 1 cut(s) 2586
EcoT14I CCWWGG 3 cut(s) 671, 1265, 1317
EcoT22I ATGCAT 3 cut(s) 262, 721, 2421
EcoT38I GRGCYC 3 cut(s) 130, 282, 947
ErhI CCWWGG 3 cut(s) 671, 1265, 1317
Esp3I CGTCTC 1 cut(s) 80
FaqI GGGAC 2 cut(s) 1032, 1116
FauI CCCGC 1 cut(s) 2174
FbaI TGATCA 2 cut(s) 132, 2445
FblI GTMKAC 1 cut(s) 1125
FriOI GRGCYC 3 cut(s) 130, 282, 947
FspBI CTAG 3 cut(s) 650, 2466, 2505
GlaI GCGC 4 cut(s) 149, 187, 391, 465
GsaI CCCAGC 1 cut(s) 666
GsuI CTGGAG 2 cut(s) 684, 2286
HaeII RGCGCY 1 cut(s) 151
HapII CCGG 3 cut(s) 1294, 1827, 2308
HgaI GACGC 2 cut(s) 795, 2641
HhaI GCGC 4 cut(s) 150, 188, 392, 466
Hin6I GCGC 4 cut(s) 148, 186, 390, 464
HinP1I GCGC 4 cut(s) 148, 186, 390, 464
HincII GTYRAC 2 cut(s) 1849, 2071
HindII GTYRAC 2 cut(s) 1849, 2071
HinfI GANTC 6 cut(s) 28, 1079, 1554, 1803, 2272, 2333
HpaII CCGG 3 cut(s) 1294, 1827, 2308
HphI GGTGA 4 cut(s) 1074, 1133, 1417, 1904
Hpy166II GTNNAC 6 cut(s) 353, 780, 1058, 1126, 1849, 2071
Hpy188III TCNNGA 6 cut(s) 194, 1900, 2033, 2353, 2369, 2432
Hpy8I GTNNAC 6 cut(s) 353, 780, 1058, 1126, 1849, 2071
HpyAV CCTTC 4 cut(s) 224, 1021, 1142, 1924
HpyCH4III ACNGT 7 cut(s) 294, 777, 1130, 1444, 1486, 1756, 2217
HpyCH4IV ACGT 4 cut(s) 89, 108, 1299, 1345
HpyF3I CTNAG 9 cut(s) 393, 639, 1001, 1372, 1749, 1944, 2405, 2547, 2682
HpySE526I ACGT 4 cut(s) 89, 108, 1299, 1345
HspAI GCGC 4 cut(s) 148, 186, 390, 464
KpnI GGTACC 1 cut(s) 2206
Ksp22I TGATCA 2 cut(s) 132, 2445
LmnI GCTCC 9 cut(s) 344, 703, 885, 982, 1193, 1450, 1501, 1699, 2113
Lsp1109I GCAGC 8 cut(s) 496, 549, 622, 1027, 1060, 1235, 2477, 2534
LweI GCATC 8 cut(s) 180, 504, 685, 706, 964, 1948, 2111, 2642
MabI ACCWGGT 3 cut(s) 1875, 1979, 2198
MaeI CTAG 3 cut(s) 650, 2466, 2505
MaeII ACGT 4 cut(s) 89, 108, 1299, 1345
MaeIII GTNAC 9 cut(s) 42, 428, 743, 1004, 1231, 1513, 1638, 1950, 2223
MboII GAAGA 7 cut(s) 85, 797, 831, 854, 1424, 1931, 2100
MfeI CAATTG 5 cut(s) 981, 1617, 2176, 2512, 2577
MflI RGATCY 5 cut(s) 508, 844, 1030, 2020, 2603
MhlI GDGCHC 6 cut(s) 130, 282, 947, 1330, 2171, 2323
MlsI TGGCCA 2 cut(s) 273, 606
MluNI TGGCCA 2 cut(s) 273, 606
MlyI GAGTC 1 cut(s) 2342
Mox20I TGGCCA 2 cut(s) 273, 606
Mph1103I ATGCAT 3 cut(s) 262, 721, 2421
MroXI GAANNNNTTC 1 cut(s) 2360
MscI TGGCCA 2 cut(s) 273, 606
MseI TTAA 9 cut(s) 471, 495, 1508, 1653, 1710, 1818, 1833, 1887, 2628
MslI CAYNNNNRTG 2 cut(s) 1509, 2218
Msp20I TGGCCA 2 cut(s) 273, 606
MspCI CTTAAG 1 cut(s) 1886
MspI CCGG 3 cut(s) 1294, 1827, 2308
MspR9I CCNGG 9 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200, 2308, 2309
MunI CAATTG 5 cut(s) 981, 1617, 2176, 2512, 2577
Mva1269I GAATGC 1 cut(s) 1193
MvaI CCWGG 7 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200
MvnI CGCG 2 cut(s) 186, 879
NciI CCSGG 2 cut(s) 2308, 2309
NcoI CCATGG 2 cut(s) 671, 1265
NheI GCTAGC 1 cut(s) 2465
NlaIV GGNNCC 8 cut(s) 346, 669, 944, 945, 946, 1104, 1452, 2204
NmeAIII GCCGAG 2 cut(s) 109, 2642
NmuCI GTSAC 4 cut(s) 428, 1004, 1513, 1950
NsiI ATGCAT 3 cut(s) 262, 721, 2421
NspI RCATGY 5 cut(s) 157, 723, 1040, 1124, 1630
NspV TTCGAA 1 cut(s) 451
PaeI GCATGC 3 cut(s) 157, 723, 1630
PceI AGGCCT 2 cut(s) 835, 1152
PciI ACATGT 1 cut(s) 1120
PcsI WCGNNNNNNNCGW 3 cut(s) 81, 114, 1206
PctI GAATGC 1 cut(s) 1193
PdmI GAANNNNTTC 1 cut(s) 2360
PfeI GAWTC 5 cut(s) 28, 1079, 1554, 1803, 2272
PflFI GACNNNGTC 1 cut(s) 320
PflMI CCANNNNNTGG 3 cut(s) 1434, 2117, 2672
PfoI TCCNGGA 1 cut(s) 700
PleI GAGTC 1 cut(s) 2341
PpsI GAGTC 1 cut(s) 2341
PscI ACATGT 1 cut(s) 1120
Psp124BI GAGCTC 1 cut(s) 130
Psp6I CCWGG 7 cut(s) 51, 436, 700, 1875, 1979, 2058, 2198
PspFI CCCAGC 1 cut(s) 662
PspGI CCWGG 7 cut(s) 51, 436, 700, 1875, 1979, 2058, 2198
PspN4I GGNNCC 8 cut(s) 346, 669, 944, 945, 946, 1104, 1452, 2204
PspOMI GGGCCC 1 cut(s) 943
PspPI GGNCC 6 cut(s) 377, 548, 943, 944, 1103, 2056
PstI CTGCAG 1 cut(s) 567
PstNI CAGNNNCTG 1 cut(s) 1229
PsuI RGATCY 5 cut(s) 508, 844, 1030, 2020, 2603
PsyI GACNNNGTC 1 cut(s) 320
RsaI GTAC 3 cut(s) 296, 1985, 2204
RsaNI GTAC 3 cut(s) 295, 1984, 2203
RseI CAYNNNNRTG 2 cut(s) 1509, 2218
SacI GAGCTC 1 cut(s) 130
SaqAI TTAA 9 cut(s) 471, 495, 1508, 1653, 1710, 1818, 1833, 1887, 2628
Sau96I GGNCC 6 cut(s) 377, 548, 943, 944, 1103, 2056
SchI GAGTC 1 cut(s) 2342
ScrFI CCNGG 9 cut(s) 53, 438, 702, 1877, 1981, 2060, 2200, 2308, 2309
SduI GDGCHC 6 cut(s) 130, 282, 947, 1330, 2171, 2323
SexAI ACCWGGT 3 cut(s) 1875, 1979, 2198
SfaNI GCATC 8 cut(s) 180, 504, 685, 706, 964, 1948, 2111, 2642
SfcI CTRYAG 1 cut(s) 563
SfuI TTCGAA 1 cut(s) 451
SinI GGWCC 2 cut(s) 548, 1103
SmaI CCCGGG 1 cut(s) 2309
SmiI ATTTAAAT 1 cut(s) 1509
SmiMI CAYNNNNRTG 2 cut(s) 1509, 2218
SmlI CTYRAG 4 cut(s) 1718, 1886, 2322, 2481
SmoI CTYRAG 4 cut(s) 1718, 1886, 2322, 2481
SphI GCATGC 3 cut(s) 157, 723, 1630
SseBI AGGCCT 2 cut(s) 835, 1152
SsiI CCGC 7 cut(s) 78, 81, 151, 879, 1085, 1191, 2181
SspI AATATT 2 cut(s) 589, 1497
SspMI CTAG 3 cut(s) 650, 2466, 2505
SstI GAGCTC 1 cut(s) 130
StuI AGGCCT 2 cut(s) 835, 1152
StyD4I CCNGG 9 cut(s) 51, 436, 700, 1875, 1979, 2058, 2198, 2306, 2307
StyI CCWWGG 3 cut(s) 671, 1265, 1317
SwaI ATTTAAAT 1 cut(s) 1509
TaaI ACNGT 7 cut(s) 294, 777, 1130, 1444, 1486, 1756, 2217
TaiI ACGT 4 cut(s) 92, 111, 1302, 1348
TaqI TCGA 6 cut(s) 31, 138, 451, 1209, 2001, 2364
TaqII GACCGA 1 cut(s) 1670
TatI WGTACW 1 cut(s) 294
TauI GCSGC 3 cut(s) 80, 83, 153
TfiI GAWTC 5 cut(s) 28, 1079, 1554, 1803, 2272
Tru1I TTAA 9 cut(s) 471, 495, 1508, 1653, 1710, 1818, 1833, 1887, 2628
Tru9I TTAA 9 cut(s) 471, 495, 1508, 1653, 1710, 1818, 1833, 1887, 2628
TscAI CASTG 7 cut(s) 355, 423, 780, 1318, 1761, 1959, 2432
TseFI GTSAC 4 cut(s) 428, 1004, 1513, 1950
TseI GCWGC 8 cut(s) 484, 562, 635, 1040, 1073, 1223, 2490, 2522
Tsp45I GTSAC 4 cut(s) 428, 1004, 1513, 1950
TspDTI ATGAA 6 cut(s) 591, 1002, 1148, 1161, 1425, 2520
TspGWI ACGGA 1 cut(s) 946
TspMI CCCGGG 1 cut(s) 2307
TspRI CASTG 7 cut(s) 355, 423, 780, 1318, 1761, 1959, 2432
Tth111I GACNNNGTC 1 cut(s) 320
Van91I CCANNNNNTGG 3 cut(s) 1434, 2117, 2672
Vha464I CTTAAG 1 cut(s) 1886
VpaK11BI GGWCC 2 cut(s) 548, 1103
XapI RAATTY 4 cut(s) 334, 400, 754, 2459
XceI RCATGY 5 cut(s) 157, 723, 1040, 1124, 1630
XcmI CCANNNNNNNNNTGG 1 cut(s) 1461
XmaI CCCGGG 1 cut(s) 2307
XmiI GTMKAC 1 cut(s) 1125
XmnI GAANNNNTTC 1 cut(s) 2360
XspI CTAG 3 cut(s) 650, 2466, 2505
Zsp2I ATGCAT 3 cut(s) 262, 721, 2421
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.