Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr4

Orthogroup ID

OG0014328

Physical Location & Seq

Genomic Coordinates Forward (+)

36000636 .. 36008774

Gene Structure 8139 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw4G015680.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1971 bp

ATGGGTCATGTGCAAATAGATGCATGCAATGGATACTACTGTGATGGATACAAGTCAAATTCATATAATAAGCCAATTCTTTGGACAGAAGACTGGGATGGGTGGTATGCATCATGGGGTGGAAGTTTGCCTCACAGGCCTGTTGAAGATCTTGCATTTGCAGTAGCACGCTTTTTCCAACGTGGAGGGAGCTTTCAGAATTATTATATGTATTTTGGTGGTACGAACTTTGGCCGGACTTCTGGGGGGCCATTTTATATTACCAGTTATGATTATGATGCTCCAATTGATGAATATGGACTGCTGAGTGAACCTAAATGGGGACATCTGAAGGATCTACATGCTGCTATAAAGCTGTGTGAGCCTGCTCTTGTTGCTGCTGATTCACCGGATTACATTAAATTGGGACCAAAACAGGAGGCACATGTATACGGTTCAACAGTTCACACTAAAGGCTTAAACTTTACTTGGTTTGGTAGAAGTCAAAGCCAGTGTTCTGCATTCCTCGCAAACATTGATGAACATAGATCAGCTTCTGTAACATTCCTAGGTCAAACATATAATCTGCCACCATGGTCAGTCAGTATATTGCCAGACTGTAGGAACGTTGTGTTCAACACTGCCAAGGTTGGGGCGCAAACTTCCATAAAAAGAGTAAACTCTGATTTGCCTCTTCCAGTTATTTCCGAGAACAAAAATTTGTATACCATGAAACCCTGGATGACTTTAGAAGAGCCAATTGGTATTTGGAGTGAGAATAATTTTACAGTCCGAGGAATATTGGAGCATTTAAATGTGACAAAGGACCATTCTGATTACCTGTGGCATATAACCAGAATATTTGTTTCAGATGAGGACATCTCTTTTTGGGAGGAAAGCAATATTAGTCCAGCAATTACAATCGATAGCATGCGAGATGTGTTGCGTGTATTTGTTAATGGCCAGCTTACAGGCAGTGTGATCGGTCATTGGGTCAAGGTAGTGCAGCCTGTTAGGTTTGTCAAGGGATATAATGACTTGTTGCTGTTAACTCAGACAGTTGGCTTGCAGAACTATGGTGCTTTCCTTGAGAAAGATGGGGCAGGATTTAGAGGACATGTCAAACTGACTGGGTTTAAAAATGGGGATATCGACCTCTCAACATTGTTATGGACTTACCAGGTTGGGCTTAAAGGAGAGTTTTTCAAAATATACACCGTAGAAGAAAATGAGAAGGCAGGTTGGGCTGAGTTGTCACTAGATGCTGATCCATCCACTTTTACCTGGTACAAGACATACTTTGATAGCCCTGCTGGCACAGATCCAGTGGCTCTAAATTTAGGAAGCATGGGAAAGGGCCAGGCTTGGGTCAATGGCCACCATATAGGAAGGTATTGGACACTTGTTGCTCCAAAAGATGGATGCCAAGAAATCTGTGATTATCGAGGGGCATACAACTCCGATAAGTGCACAACAAATTGTGGGAAGCCTACTCAAACCTGGTACCATATTCCACGGTCATGGTTGCAGGCTTCAAGTAATTTACTTGTTATCTTTGAGGAAATTGGAGGGAATCCATTTGAGATTTCAATCAACTCGCGTGCAGTTGGAACCATCTGTGCTCAAGTGTCAGAATCTCACTACCCACCTGTCCAGAAGTGGTTCAGTCCAGATTTTATTGATGAAAAAGGCAGAGTAAATGATCGGACACCAGAAATTCACTTGCAATGTCAAGACGGGTTTATAATATCTTCCATAGAATTTGCTAGCTATGGAAGTCCTCAAGGTCGTTGCCAGAAGTTTTCTCAAGGGAATTGCCACGCTTCGAATTCTTTCTCCATAGTTTCCGAGGCTTGCCTGGGAAAGAATAGCTGTTCAGTCGGAGTATCAAATCTTGTATTTGGAGATGACCCATGCCGGGGTATTGTTAAGACGTTGGCTGTTGAGGCAAGATGCAGGTCACTACCAACCGTTGGTTTTTCTCAGCTCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0004565 GO:0005575 GO:0005618 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0009505 GO:0015925 GO:0016020 GO:0016787 GO:0016798 GO:0030312 GO:0031090 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044437 GO:0044444 GO:0044446 GO:0044464 GO:0071944 GO:0098588 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Gal_Lectin Glyco_hydro_35

Protein Analysis

656

Amino Acids

73.3

Weight (kDa)

5.78

Isoelectric Point (pI)

38.69

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_35	PF01301	6 - 116	1.5e-34	Glycosyl hydrolases family 35
GHD	PF17834	156 - 210	9.1e-25	Beta-sandwich domain in beta galactosidase
BetaGal_gal-bd	PF21467	421 - 507	1e-25	Beta-galactosidase, galactose-binding domain
SUEL_Lectin	PF02140	568 - 645	6e-23	D-galactoside/L-rhamnose binding SUEL lectin domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0014328)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G32810 AT2G32810
fragaria_vesca	FvH4_4g13490
malus_domestica	MD13G1283100.v1.1
prunus_persica	Prupe.1G160600_v2.0.a1 Prupe.1G160600_v2.0.a1
pyrus_communis	pycom420g01190
rosa_chinensis	RchiOBHm_Chr4g0414111
rosa_laevigata	RLG00000008175
rosa_multiflora	Rmu_sc0003264.1_g000008
rosa_roxburghii	Rroxscaffold_5G00358040
rosa_rugosa	Rorug04G0125600 Rorug04G0125700
rosa_samantha	Rh4AG184200 Rh4BG183700 Rh4DG179600
rosa_wichuraiana	Rw4G015680

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1724
Acc36I	ACCTGC	2 cut(s)	1208, 1926
Acc65I	GGTACC	1 cut(s)	1482
AccB1I	GGYRCC	1 cut(s)	1482
AccB7I	CCANNNNNTGG	2 cut(s)	1397, 1952
AccI	GTMKAC	2 cut(s)	429, 704
AccII	CGCG	1 cut(s)	1579
AclI	AACGTT	1 cut(s)	606
AclWI	GGATC	3 cut(s)	342, 1241, 1295
AcoI	YGGCCR	3 cut(s)	232, 940, 1354
AcsI	RAATTY	6 cut(s)	58, 697, 1315, 1695, 1739, 1807
AcuI	CTGAAG	1 cut(s)	350
AfaI	GTAC	3 cut(s)	223, 1268, 1484
AfiI	CCNNNNNNNGG	7 cut(s)	320, 630, 1345, 1397, 1897, 1898, 1952
AflIII	ACRYGT	2 cut(s)	424, 1096
AgsI	TTSAA	6 cut(s)	146, 438, 616, 1186, 1515, 1569
AjnI	CCWGG	6 cut(s)	716, 1158, 1262, 1338, 1478, 1836
AjuI	GAANNNNNNNTTGG	2 cut(s)	723, 755
AluBI	AGCT	7 cut(s)	192, 355, 533, 946, 1749, 1851, 1966
AluI	AGCT	7 cut(s)	192, 355, 533, 946, 1749, 1851, 1966
Alw21I	GWGCWC	2 cut(s)	1451, 1603
Alw44I	GTGCAC	1 cut(s)	1447
AlwI	GGATC	3 cut(s)	342, 1241, 1295
AlwNI	CAGNNNCTG	1 cut(s)	536
AoxI	GGCC	6 cut(s)	137, 232, 248, 940, 1336, 1354
ApaLI	GTGCAC	1 cut(s)	1447
ApeKI	GCWGC	3 cut(s)	344, 377, 985
ApoI	RAATTY	6 cut(s)	58, 697, 1315, 1695, 1739, 1807
Asp700I	GAANNNNTTC	2 cut(s)	1640, 1811
Asp718I	GGTACC	1 cut(s)	1482
AspA2I	CCTAGG	1 cut(s)	547
AspLEI	GCGC	1 cut(s)	637
AspS9I	GGNCC	4 cut(s)	248, 407, 805, 1336
AsuC2I	CCSGG	1 cut(s)	1898
AsuHPI	GGTGA	1 cut(s)	378
AsuII	TTCGAA	1 cut(s)	1805
AsuNHI	GCTAGC	1 cut(s)	1745
AvaII	GGWCC	2 cut(s)	407, 805
AvrII	CCTAGG	1 cut(s)	547
BaeGI	GKGCMC	1 cut(s)	1451
BaeI	ACNNNNGTAYC	2 cut(s)	25, 58
BalI	TGGCCA	2 cut(s)	942, 1356
BanI	GGYRCC	1 cut(s)	1482
BbsI	GAAGAC	1 cut(s)	96
Bbv12I	GWGCWC	2 cut(s)	1451, 1603
BbvI	GCAGC	3 cut(s)	331, 364, 997
BccI	CCATC	6 cut(s)	38, 92, 1070, 1258, 1391, 1601
BcgI	CGANNNNNNTGC	2 cut(s)	943, 977
BciT130I	CCWGG	6 cut(s)	718, 1160, 1264, 1340, 1480, 1838
BciVI	GTATCC	2 cut(s)	26, 41
BcnI	CCSGG	1 cut(s)	1898
BfaI	CTAG	3 cut(s)	548, 1238, 1746
BfmI	CTRYAG	1 cut(s)	598
BfuAI	ACCTGC	2 cut(s)	1208, 1926
BfuI	GTATCC	2 cut(s)	26, 41
BglI	GCCNNNNNGGC	2 cut(s)	136, 1293
BglII	AGATCT	1 cut(s)	148
BisI	GCNGC	3 cut(s)	345, 378, 986
BlnI	CCTAGG	1 cut(s)	547
BlsI	GCNGC	3 cut(s)	346, 379, 987
Bme1390I	CCNGG	7 cut(s)	718, 1160, 1264, 1340, 1480, 1838, 1898
Bme18I	GGWCC	2 cut(s)	407, 805
BmgT120I	GGNCC	4 cut(s)	248, 407, 805, 1336
BmiI	GGNNCC	4 cut(s)	249, 408, 1484, 1591
BmrFI	CCNGG	7 cut(s)	718, 1160, 1264, 1340, 1480, 1838, 1898
BmrI	ACTGGG	2 cut(s)	103, 1119
BmsI	GCATC	6 cut(s)	10, 119, 268, 1231, 1391, 1922
BmtI	GCTAGC	1 cut(s)	1749
BmuI	ACTGGG	2 cut(s)	103, 1119
BpiI	GAAGAC	1 cut(s)	96
BplI	GAGNNNNNCTC	2 cut(s)	845, 877
Bpu14I	TTCGAA	1 cut(s)	1805
BpuEI	CTTGAG	4 cut(s)	1088, 1587, 1746, 1770
BpuMI	CCSGG	1 cut(s)	1898
Bsa29I	ATCGAT	1 cut(s)	903
BsaBI	GATNNNNATC	2 cut(s)	1245, 1568
BsaJI	CCNNGG	9 cut(s)	547, 572, 624, 716, 772, 1493, 1827, 1837, 1897
BsaWI	WCCGGW	1 cut(s)	388
Bsc4I	CCNNNNNNNGG	7 cut(s)	320, 630, 1345, 1397, 1897, 1898, 1952
Bse1I	ACTGG	6 cut(s)	98, 264, 490, 677, 1114, 1304
Bse3DI	GCAATG	2 cut(s)	34, 1712
Bse8I	GATNNNNATC	2 cut(s)	1245, 1568
BseBI	CCWGG	6 cut(s)	718, 1160, 1264, 1340, 1480, 1838
BseCI	ATCGAT	1 cut(s)	903
BseDI	CCNNGG	9 cut(s)	547, 572, 624, 716, 772, 1493, 1827, 1837, 1897
BseGI	GGATG	4 cut(s)	103, 726, 1250, 1406
BseJI	GATNNNNATC	2 cut(s)	1245, 1568
BseLI	CCNNNNNNNGG	7 cut(s)	320, 630, 1345, 1397, 1897, 1898, 1952
BseMI	GCAATG	2 cut(s)	34, 1712
BseMII	CTCAG	3 cut(s)	296, 1046, 1218
BseNI	ACTGG	6 cut(s)	98, 264, 490, 677, 1114, 1304
BseSI	GKGCMC	1 cut(s)	1451
BseXI	GCAGC	3 cut(s)	331, 364, 997
BsgI	GTGCAG	2 cut(s)	1004, 1602
Bsh1236I	CGCG	1 cut(s)	1579
BshFI	GGCC	6 cut(s)	139, 234, 250, 942, 1338, 1356
BshNI	GGYRCC	1 cut(s)	1482
BshVI	ATCGAT	1 cut(s)	903
BsiHKAI	GWGCWC	2 cut(s)	1451, 1603
BsiSI	CCGG	3 cut(s)	235, 389, 1897
BslFI	GGGAC	2 cut(s)	336, 420
BslI	CCNNNNNNNGG	7 cut(s)	320, 630, 1345, 1397, 1897, 1898, 1952
BsmFI	GGGAC	2 cut(s)	336, 420
BsmI	GAATGC	1 cut(s)	500
BsnI	GGCC	6 cut(s)	139, 234, 250, 942, 1338, 1356
Bsp119I	TTCGAA	1 cut(s)	1805
Bsp1286I	GDGCHC	2 cut(s)	1451, 1603
Bsp143I	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
Bsp19I	CCATGG	1 cut(s)	572
BspANI	GGCC	6 cut(s)	139, 234, 250, 942, 1338, 1356
BspCNI	CTCAG	3 cut(s)	297, 1045, 1219
BspDI	ATCGAT	1 cut(s)	903
BspFNI	CGCG	1 cut(s)	1579
BspLI	GGNNCC	4 cut(s)	249, 408, 1484, 1591
BspMI	ACCTGC	2 cut(s)	1208, 1926
BspOI	GCTAGC	1 cut(s)	1749
BspPI	GGATC	3 cut(s)	342, 1241, 1295
BspQI	GCTCTTC	1 cut(s)	726
BspT104I	TTCGAA	1 cut(s)	1805
BspT107I	GGYRCC	1 cut(s)	1482
BsrDI	GCAATG	2 cut(s)	34, 1712
BsrI	ACTGG	6 cut(s)	98, 264, 490, 677, 1114, 1304
BssECI	CCNNGG	9 cut(s)	547, 572, 624, 716, 772, 1493, 1827, 1837, 1897
BssMI	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
BssNAI	GTATAC	2 cut(s)	430, 705
BssT1I	CCWWGG	3 cut(s)	547, 572, 624
Bst1107I	GTATAC	2 cut(s)	430, 705
Bst2UI	CCWGG	6 cut(s)	718, 1160, 1264, 1340, 1480, 1838
Bst4CI	ACNGT	9 cut(s)	41, 434, 442, 599, 769, 1039, 1198, 1497, 1951
Bst6I	CTCTTC	2 cut(s)	678, 726
BstBI	TTCGAA	1 cut(s)	1805
BstDEI	CTNAG	4 cut(s)	305, 1032, 1227, 1962
BstDSI	CCRYGG	2 cut(s)	572, 1493
BstF5I	GGATG	4 cut(s)	103, 726, 1250, 1406
BstFNI	CGCG	1 cut(s)	1579
BstHHI	GCGC	1 cut(s)	637
BstKTI	GATC	7 cut(s)	151, 337, 530, 963, 1249, 1303, 1684
BstMBI	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
BstMWI	GCNNNNNNNGC	7 cut(s)	136, 361, 374, 506, 1223, 1293, 1925
BstNI	CCWGG	6 cut(s)	718, 1160, 1264, 1340, 1480, 1838
BstNSI	RCATGY	5 cut(s)	27, 344, 428, 913, 1100
BstSCI	CCNGG	7 cut(s)	716, 1158, 1262, 1338, 1478, 1836, 1896
BstSFI	CTRYAG	1 cut(s)	598
BstSLI	GKGCMC	1 cut(s)	1451
BstUI	CGCG	1 cut(s)	1579
BstV1I	GCAGC	3 cut(s)	331, 364, 997
BstV2I	GAAGAC	1 cut(s)	96
BstX2I	RGATCY	3 cut(s)	148, 334, 1300
BstXI	CCANNNNNNTGG	2 cut(s)	81, 1500
BstYI	RGATCY	3 cut(s)	148, 334, 1300
BstZ17I	GTATAC	2 cut(s)	430, 705
Bsu15I	ATCGAT	1 cut(s)	903
BsuI	GTATCC	2 cut(s)	26, 41
BsuRI	GGCC	6 cut(s)	139, 234, 250, 942, 1338, 1356
BsuTUI	ATCGAT	1 cut(s)	903
BtgI	CCRYGG	2 cut(s)	572, 1493
BtsCI	GGATG	4 cut(s)	103, 726, 1250, 1406
BtsI	GCAGTG	2 cut(s)	618, 961
BtsIMutI	CAGTG	4 cut(s)	497, 618, 961, 1311
BveI	ACCTGC	2 cut(s)	1208, 1926
CaiI	CAGNNNCTG	1 cut(s)	536
CfoI	GCGC	1 cut(s)	637
Cfr13I	GGNCC	4 cut(s)	248, 407, 805, 1336
ClaI	ATCGAT	1 cut(s)	903
CsiI	ACCWGGT	3 cut(s)	1158, 1262, 1478
Csp6I	GTAC	3 cut(s)	222, 1267, 1483
CviQI	GTAC	3 cut(s)	222, 1267, 1483
DdeI	CTNAG	4 cut(s)	305, 1032, 1227, 1962
DpnI	GATC	7 cut(s)	150, 336, 529, 962, 1248, 1302, 1683
DpnII	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
DraI	TTTAAA	2 cut(s)	792, 1117
EaeI	YGGCCR	3 cut(s)	232, 940, 1354
Eam1104I	CTCTTC	2 cut(s)	678, 726
EarI	CTCTTC	2 cut(s)	678, 726
Eco130I	CCWWGG	3 cut(s)	547, 572, 624
Eco147I	AGGCCT	1 cut(s)	139
Eco32I	GATATC	1 cut(s)	1129
Eco47I	GGWCC	2 cut(s)	407, 805
Eco57I	CTGAAG	1 cut(s)	350
EcoRI	GAATTC	1 cut(s)	1807
EcoRII	CCWGG	6 cut(s)	716, 1158, 1262, 1338, 1478, 1836
EcoRV	GATATC	1 cut(s)	1129
EcoT14I	CCWWGG	3 cut(s)	547, 572, 624
EcoT22I	ATGCAT	2 cut(s)	25, 112
ErhI	CCWWGG	3 cut(s)	547, 572, 624
FalI	AAGNNNNNCTT	2 cut(s)	1262, 1294
FaqI	GGGAC	2 cut(s)	336, 420
FblI	GTMKAC	2 cut(s)	429, 704
Fnu4HI	GCNGC	3 cut(s)	345, 378, 986
FokI	GGATG	4 cut(s)	110, 733, 1237, 1413
Fsp4HI	GCNGC	3 cut(s)	345, 378, 986
FspBI	CTAG	3 cut(s)	548, 1238, 1746
GlaI	GCGC	1 cut(s)	636
GluI	GCNGC	3 cut(s)	345, 378, 986
HaeIII	GGCC	6 cut(s)	139, 234, 250, 942, 1338, 1356
HapII	CCGG	3 cut(s)	235, 389, 1897
HhaI	GCGC	1 cut(s)	637
Hin6I	GCGC	1 cut(s)	635
HinP1I	GCGC	1 cut(s)	635
HincII	GTYRAC	1 cut(s)	1029
HindII	GTYRAC	1 cut(s)	1029
HinfI	GANTC	3 cut(s)	383, 1552, 1613
HpaI	GTTAAC	1 cut(s)	1029
HpaII	CCGG	3 cut(s)	235, 389, 1897
HphI	GGTGA	1 cut(s)	378
Hpy166II	GTNNAC	7 cut(s)	311, 430, 445, 658, 705, 1029, 1449
Hpy188III	TCNNGA	3 cut(s)	1633, 1649, 1712
Hpy8I	GTNNAC	7 cut(s)	311, 430, 445, 658, 705, 1029, 1449
HpyAV	CCTTC	3 cut(s)	325, 1207, 1362
HpyCH4III	ACNGT	9 cut(s)	41, 434, 442, 599, 769, 1039, 1198, 1497, 1951
HpyCH4IV	ACGT	3 cut(s)	181, 606, 1913
HpyF10VI	GCNNNNNNNGC	7 cut(s)	136, 361, 374, 506, 1223, 1293, 1925
HpyF3I	CTNAG	4 cut(s)	305, 1032, 1227, 1962
HpySE526I	ACGT	3 cut(s)	181, 606, 1913
HspAI	GCGC	1 cut(s)	635
KpnI	GGTACC	1 cut(s)	1486
KspAI	GTTAAC	1 cut(s)	1029
Kzo9I	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
LguI	GCTCTTC	1 cut(s)	726
LmnI	GCTCC	4 cut(s)	189, 286, 784, 1393
Lsp1109I	GCAGC	3 cut(s)	331, 364, 997
LweI	GCATC	6 cut(s)	10, 119, 268, 1231, 1391, 1922
MabI	ACCWGGT	3 cut(s)	1158, 1262, 1478
MaeI	CTAG	3 cut(s)	548, 1238, 1746
MaeII	ACGT	3 cut(s)	181, 606, 1913
MaeIII	GTNAC	4 cut(s)	538, 796, 1233, 1938
MalI	GATC	7 cut(s)	150, 336, 529, 962, 1248, 1302, 1683
MboI	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
MboII	GAAGA	6 cut(s)	101, 158, 665, 743, 1214, 1722
MfeI	CAATTG	2 cut(s)	285, 738
MflI	RGATCY	3 cut(s)	148, 334, 1300
MhlI	GDGCHC	2 cut(s)	1451, 1603
MlsI	TGGCCA	2 cut(s)	942, 1356
MluNI	TGGCCA	2 cut(s)	942, 1356
MmeI	TCCRAC	3 cut(s)	202, 1567, 1840
Mox20I	TGGCCA	2 cut(s)	942, 1356
Mph1103I	ATGCAT	2 cut(s)	25, 112
MroXI	GAANNNNTTC	2 cut(s)	1640, 1811
MscI	TGGCCA	2 cut(s)	942, 1356
MseI	TTAA	8 cut(s)	399, 458, 791, 936, 1028, 1116, 1170, 1908
MslI	CAYNNNNRTG	3 cut(s)	792, 1147, 1498
Msp20I	TGGCCA	2 cut(s)	942, 1356
MspI	CCGG	3 cut(s)	235, 389, 1897
MspR9I	CCNGG	7 cut(s)	718, 1160, 1264, 1340, 1480, 1838, 1898
MunI	CAATTG	2 cut(s)	285, 738
Mva1269I	GAATGC	1 cut(s)	500
MvaI	CCWGG	6 cut(s)	718, 1160, 1264, 1340, 1480, 1838
MvnI	CGCG	1 cut(s)	1579
MwoI	GCNNNNNNNGC	7 cut(s)	136, 361, 374, 506, 1223, 1293, 1925
NciI	CCSGG	1 cut(s)	1898
NcoI	CCATGG	1 cut(s)	572
NdeII	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
NheI	GCTAGC	1 cut(s)	1745
NlaIV	GGNNCC	4 cut(s)	249, 408, 1484, 1591
NmuCI	GTSAC	3 cut(s)	796, 1233, 1938
NsiI	ATGCAT	2 cut(s)	25, 112
NspI	RCATGY	5 cut(s)	27, 344, 428, 913, 1100
NspV	TTCGAA	1 cut(s)	1805
PaeI	GCATGC	2 cut(s)	27, 913
PceI	AGGCCT	1 cut(s)	139
PciI	ACATGT	2 cut(s)	424, 1096
PciSI	GCTCTTC	1 cut(s)	726
PctI	GAATGC	1 cut(s)	500
PdmI	GAANNNNTTC	2 cut(s)	1640, 1811
PfeI	GAWTC	3 cut(s)	383, 1552, 1613
PflMI	CCANNNNNTGG	2 cut(s)	1397, 1952
PkrI	GCNGC	3 cut(s)	346, 379, 987
PscI	ACATGT	2 cut(s)	424, 1096
PsiI	TTATAA	1 cut(s)	1724
Psp1406I	AACGTT	1 cut(s)	606
Psp6I	CCWGG	6 cut(s)	716, 1158, 1262, 1338, 1478, 1836
PspGI	CCWGG	6 cut(s)	716, 1158, 1262, 1338, 1478, 1836
PspN4I	GGNNCC	4 cut(s)	249, 408, 1484, 1591
PspPI	GGNCC	4 cut(s)	248, 407, 805, 1336
PstNI	CAGNNNCTG	1 cut(s)	536
PsuI	RGATCY	3 cut(s)	148, 334, 1300
RsaI	GTAC	3 cut(s)	223, 1268, 1484
RsaNI	GTAC	3 cut(s)	222, 1267, 1483
RseI	CAYNNNNRTG	3 cut(s)	792, 1147, 1498
SapI	GCTCTTC	1 cut(s)	726
SaqAI	TTAA	8 cut(s)	399, 458, 791, 936, 1028, 1116, 1170, 1908
SatI	GCNGC	3 cut(s)	345, 378, 986
Sau3AI	GATC	7 cut(s)	148, 334, 527, 960, 1246, 1300, 1681
Sau96I	GGNCC	4 cut(s)	248, 407, 805, 1336
ScrFI	CCNGG	7 cut(s)	718, 1160, 1264, 1340, 1480, 1838, 1898
SduI	GDGCHC	2 cut(s)	1451, 1603
SexAI	ACCWGGT	3 cut(s)	1158, 1262, 1478
SfaNI	GCATC	6 cut(s)	10, 119, 268, 1231, 1391, 1922
SfcI	CTRYAG	1 cut(s)	598
SfuI	TTCGAA	1 cut(s)	1805
SinI	GGWCC	2 cut(s)	407, 805
SmiI	ATTTAAAT	1 cut(s)	792
SmiMI	CAYNNNNRTG	3 cut(s)	792, 1147, 1498
SmlI	CTYRAG	4 cut(s)	1067, 1602, 1761, 1785
SmoI	CTYRAG	4 cut(s)	1067, 1602, 1761, 1785
SphI	GCATGC	2 cut(s)	27, 913
SseBI	AGGCCT	1 cut(s)	139
SspI	AATATT	3 cut(s)	780, 840, 883
SspMI	CTAG	3 cut(s)	548, 1238, 1746
StuI	AGGCCT	1 cut(s)	139
StyD4I	CCNGG	7 cut(s)	716, 1158, 1262, 1338, 1478, 1836, 1896
StyI	CCWWGG	3 cut(s)	547, 572, 624
SwaI	ATTTAAAT	1 cut(s)	792
TaaI	ACNGT	9 cut(s)	41, 434, 442, 599, 769, 1039, 1198, 1497, 1951
TaiI	ACGT	3 cut(s)	184, 609, 1916
TaqI	TCGA	4 cut(s)	903, 1131, 1423, 1805
TaqII	GACCGA	1 cut(s)	953
TfiI	GAWTC	3 cut(s)	383, 1552, 1613
Tru1I	TTAA	8 cut(s)	399, 458, 791, 936, 1028, 1116, 1170, 1908
Tru9I	TTAA	8 cut(s)	399, 458, 791, 936, 1028, 1116, 1170, 1908
TscAI	CASTG	4 cut(s)	497, 625, 961, 1311
TseFI	GTSAC	3 cut(s)	796, 1233, 1938
TseI	GCWGC	3 cut(s)	344, 377, 985
Tsp45I	GTSAC	3 cut(s)	796, 1233, 1938
TspDTI	ATGAA	5 cut(s)	51, 306, 534, 725, 1677
TspRI	CASTG	4 cut(s)	497, 625, 961, 1311
Van91I	CCANNNNNTGG	2 cut(s)	1397, 1952
VneI	GTGCAC	1 cut(s)	1447
VpaK11BI	GGWCC	2 cut(s)	407, 805
XapI	RAATTY	6 cut(s)	58, 697, 1315, 1695, 1739, 1807
XceI	RCATGY	5 cut(s)	27, 344, 428, 913, 1100
XcmI	CCANNNNNNNNNTGG	1 cut(s)	744
XmaJI	CCTAGG	1 cut(s)	547
XmiI	GTMKAC	2 cut(s)	429, 704
XmnI	GAANNNNTTC	2 cut(s)	1640, 1811
XspI	CTAG	3 cut(s)	548, 1238, 1746
Zsp2I	ATGCAT	2 cut(s)	25, 112

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.