Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0006130

Physical Location & Seq

Genomic Coordinates Reverse (-)

22742737 .. 22745433

Gene Structure 2697 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G214100.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 789 bp

ATGGCCTCAATCTCAGCCGTCGGGTCTCCACCCCGACCGCTGTCTTCTTCACCTGTCGGAAAATCTTCACACCCGGTACGTCGTTTTGCGCTTACCTTCTCTCTGATGCGCCAGAGACAGCGCCGACCTCAATCTCTTCTTGTTCCGGAACCGGAGAAATTTTCTGATTCAGGTGCAGTCGGTGGAAGTAATCCTATTGAACGAAGAAGTTTTGTCTTTTCATCCATTGGAATAGTAGCTGCAGCCTTTTGCAATGCTTCAAAAGATGGAGTAGCCCTGGCATCTCAATTTGCTGACATGCCAGCACTTCGGGGAAAGGACTATGGCAAGTCAAAAATGAGTTATCCAGACTACACAGAAACTGCATCAGGTCTTCAGTATAAGGACTTACGACTAGGAGATGGCCCCAAACCCAAGGTGGGAGAGACAGTAGTGGTTGATTGGGATGGTTACACCATAGGATATTATGGACGTATCTTTGAAGCTCGAAATAAGACAAAGGGTGGTTCATTTGAGGGTGATGACAAGGCCTTTTTCAAATTTAGAGTAGGATCTCAGGAGGTAATACCAGCTTTTGAGGAAGCTGTTTCAGGCATGGCTCTTGGTGGCATTAGAAGGATCATAGTGCCCCCAGAGTTGGGATATCCTGAGAATGACTACAACAAAAGTGGACCGAGACCCACAACATTTTCGGGCCAACGAGCCTTGGATTTTGTGCTGAGGAACCAGGGGCTGATAGACAAGACTCTTCTGTTTGATATTGAGCTCATCAAGATCATACCCAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000413 GO:0003674 GO:0003755 GO:0003824 GO:0005488 GO:0005527 GO:0005528 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006457 GO:0006464 GO:0006807 GO:0008144 GO:0008150 GO:0008152 GO:0009507 GO:0009534 GO:0009535 GO:0009536 GO:0009579 GO:0009987 GO:0016020 GO:0016853 GO:0016859 GO:0018193 GO:0018208 GO:0019538 GO:0031976 GO:0031977 GO:0031984 GO:0034357 GO:0036211 GO:0042651 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044436 GO:0044444 GO:0044446 GO:0044464 GO:0055035 GO:0061077 GO:0071704 GO:0097159 GO:0140096 GO:1901363 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FKBP_C

Protein Analysis

263

Amino Acids

28.6

Weight (kDa)

9.42

Isoelectric Point (pI)

52.75

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006130)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13410 AT5G13410 AT5G13410
fragaria_vesca	FvH4_4g22550 FvH4_4g22550
malus_domestica	MD16G1141800.v1.1
prunus_persica	Prupe.1G214100_v2.0.a1 Prupe.1G214100_v2.0.a1 Prupe.1G214100_v2.0.a1 Prupe.1G214100_v2.0.a1 Prupe.1G214100_v2.0.a1 Prupe.1G214100_v2.0.a1
pyrus_communis	pycom16g11230
rosa_chinensis	RchiOBHm_Chr4g0428781
rosa_laevigata	RLG00000007127
rosa_multiflora	Rmu_co8065596.1_g000001 Rmu_sc0018825.1_g000003 Rmu_sc0022301.1_g000002
rosa_roxburghii	Rroxscaffold_5G00370450
rosa_rugosa	Rorug04G0228500 Rorug04G0228600 Rorug04G0228700
rosa_samantha	Rh4AG285800 Rh4BG291700 Rh4CG307500 Rh4DG288800
rosa_wichuraiana	Rw4G024780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccIII	TCCGGA	1 cut(s)	145
AciI	CCGC	1 cut(s)	38
AclWI	GGATC	2 cut(s)	559, 626
AcsI	RAATTY	2 cut(s)	158, 539
AcuI	CTGAAG	1 cut(s)	359
AfaI	GTAC	1 cut(s)	78
AfiI	CCNNNNNNNGG	3 cut(s)	419, 637, 638
AgsI	TTSAA	4 cut(s)	200, 261, 482, 538
AjnI	CCWGG	2 cut(s)	276, 726
AluBI	AGCT	5 cut(s)	239, 485, 572, 584, 766
AluI	AGCT	5 cut(s)	239, 485, 572, 584, 766
Alw21I	GWGCWC	1 cut(s)	768
Alw26I	GTCTC	4 cut(s)	30, 109, 419, 670
AlwI	GGATC	2 cut(s)	559, 626
AlwNI	CAGNNNCTG	2 cut(s)	362, 733
Aor13HI	TCCGGA	1 cut(s)	145
AoxI	GGCC	4 cut(s)	3, 403, 528, 694
ApeKI	GCWGC	2 cut(s)	239, 242
ApoI	RAATTY	2 cut(s)	158, 539
Asp700I	GAANNNNTTC	1 cut(s)	64
AspLEI	GCGC	3 cut(s)	91, 111, 123
AspS9I	GGNCC	3 cut(s)	404, 671, 694
AsuC2I	CCSGG	1 cut(s)	74
AsuHPI	GGTGA	2 cut(s)	42, 530
AvaII	GGWCC	1 cut(s)	671
BaeGI	GKGCMC	1 cut(s)	630
BanII	GRGCYC	1 cut(s)	768
BbsI	GAAGAC	2 cut(s)	36, 365
Bbv12I	GWGCWC	1 cut(s)	768
BbvCI	CCTCAGC	1 cut(s)	719
BbvI	GCAGC	2 cut(s)	226, 254
BccI	CCATC	3 cut(s)	260, 395, 440
BceAI	ACGGC	1 cut(s)	2
BciT130I	CCWGG	2 cut(s)	278, 728
BcnI	CCSGG	1 cut(s)	74
BcoDI	GTCTC	4 cut(s)	30, 109, 419, 670
BfaI	CTAG	1 cut(s)	395
BfmI	CTRYAG	1 cut(s)	240
BfoI	RGCGCY	1 cut(s)	124
BisI	GCNGC	2 cut(s)	240, 243
BlsI	GCNGC	2 cut(s)	241, 244
Bme1390I	CCNGG	3 cut(s)	74, 278, 728
Bme18I	GGWCC	1 cut(s)	671
BmgT120I	GGNCC	3 cut(s)	404, 671, 694
BmiI	GGNNCC	3 cut(s)	150, 406, 725
BmrFI	CCNGG	3 cut(s)	74, 278, 728
BmsI	GCATC	3 cut(s)	96, 290, 374
BoxI	GACNNNNGTC	1 cut(s)	40
BpiI	GAAGAC	2 cut(s)	36, 365
Bpu10I	CCTNAGC	1 cut(s)	719
BpuMI	CCSGG	1 cut(s)	74
BsaI	GGTCTC	2 cut(s)	30, 670
BsaJI	CCNNGG	4 cut(s)	276, 414, 705, 727
BsaWI	WCCGGW	2 cut(s)	145, 151
BsaXI	ACNNNNNCTCC	2 cut(s)	414, 444
Bsc4I	CCNNNNNNNGG	3 cut(s)	419, 637, 638
Bse3DI	GCAATG	1 cut(s)	259
BseAI	TCCGGA	1 cut(s)	145
BseBI	CCWGG	2 cut(s)	278, 728
BseDI	CCNNGG	4 cut(s)	276, 414, 705, 727
BseGI	GGATG	2 cut(s)	221, 451
BseLI	CCNNNNNNNGG	3 cut(s)	419, 637, 638
BseMI	GCAATG	1 cut(s)	259
BseMII	CTCAG	4 cut(s)	27, 569, 639, 710
BseSI	GKGCMC	1 cut(s)	630
BseXI	GCAGC	2 cut(s)	226, 254
BsgI	GTGCAG	1 cut(s)	195
Bsh1285I	CGRYCG	1 cut(s)	38
BshFI	GGCC	4 cut(s)	5, 405, 530, 696
BsiEI	CGRYCG	1 cut(s)	38
BsiHKAI	GWGCWC	1 cut(s)	768
BsiSI	CCGG	3 cut(s)	74, 146, 152
BslI	CCNNNNNNNGG	3 cut(s)	419, 637, 638
BsmAI	GTCTC	4 cut(s)	30, 109, 419, 670
BsnI	GGCC	4 cut(s)	5, 405, 530, 696
Bso31I	GGTCTC	2 cut(s)	30, 670
Bsp1286I	GDGCHC	2 cut(s)	630, 768
Bsp13I	TCCGGA	1 cut(s)	145
Bsp143I	GATC	3 cut(s)	551, 618, 774
BspACI	CCGC	1 cut(s)	38
BspANI	GGCC	4 cut(s)	5, 405, 530, 696
BspCNI	CTCAG	4 cut(s)	26, 568, 640, 711
BspEI	TCCGGA	1 cut(s)	145
BspLI	GGNNCC	3 cut(s)	150, 406, 725
BspMAI	CTGCAG	1 cut(s)	244
BspPI	GGATC	2 cut(s)	559, 626
BspTNI	GGTCTC	2 cut(s)	30, 670
BsrDI	GCAATG	1 cut(s)	259
BssECI	CCNNGG	4 cut(s)	276, 414, 705, 727
BssMI	GATC	3 cut(s)	551, 618, 774
BssT1I	CCWWGG	2 cut(s)	414, 705
Bst2UI	CCWGG	2 cut(s)	278, 728
Bst4CI	ACNGT	1 cut(s)	430
Bst6I	CTCTTC	2 cut(s)	141, 753
BstC8I	GCNNGC	1 cut(s)	303
BstDEI	CTNAG	4 cut(s)	13, 555, 648, 719
BstF5I	GGATG	2 cut(s)	221, 451
BstH2I	RGCGCY	1 cut(s)	124
BstHHI	GCGC	3 cut(s)	91, 111, 123
BstKTI	GATC	3 cut(s)	554, 621, 777
BstMAI	GTCTC	4 cut(s)	30, 109, 419, 670
BstMBI	GATC	3 cut(s)	551, 618, 774
BstMCI	CGRYCG	1 cut(s)	38
BstNI	CCWGG	2 cut(s)	278, 728
BstNSI	RCATGY	1 cut(s)	301
BstPAI	GACNNNNGTC	1 cut(s)	40
BstSCI	CCNGG	3 cut(s)	72, 276, 726
BstSFI	CTRYAG	1 cut(s)	240
BstSLI	GKGCMC	1 cut(s)	630
BstV1I	GCAGC	2 cut(s)	226, 254
BstV2I	GAAGAC	2 cut(s)	36, 365
BstX2I	RGATCY	1 cut(s)	551
BstYI	RGATCY	1 cut(s)	551
BsuRI	GGCC	4 cut(s)	5, 405, 530, 696
BtsCI	GGATG	2 cut(s)	221, 451
Cac8I	GCNNGC	1 cut(s)	303
CaiI	CAGNNNCTG	2 cut(s)	362, 733
CfoI	GCGC	3 cut(s)	91, 111, 123
Cfr13I	GGNCC	3 cut(s)	404, 671, 694
Csp6I	GTAC	1 cut(s)	77
CspCI	CAANNNNNGTGG	2 cut(s)	649, 684
CviAII	CATG	2 cut(s)	298, 595
CviQI	GTAC	1 cut(s)	77
DdeI	CTNAG	4 cut(s)	13, 555, 648, 719
DpnI	GATC	3 cut(s)	553, 620, 776
DpnII	GATC	3 cut(s)	551, 618, 774
Eam1104I	CTCTTC	2 cut(s)	141, 753
EarI	CTCTTC	2 cut(s)	141, 753
Ecl136II	GAGCTC	1 cut(s)	766
Eco130I	CCWWGG	2 cut(s)	414, 705
Eco147I	AGGCCT	1 cut(s)	530
Eco24I	GRGCYC	1 cut(s)	768
Eco31I	GGTCTC	2 cut(s)	30, 670
Eco32I	GATATC	1 cut(s)	644
Eco47I	GGWCC	1 cut(s)	671
Eco53kI	GAGCTC	1 cut(s)	766
Eco57I	CTGAAG	1 cut(s)	359
EcoICRI	GAGCTC	1 cut(s)	766
EcoRII	CCWGG	2 cut(s)	276, 726
EcoRV	GATATC	1 cut(s)	644
EcoT14I	CCWWGG	2 cut(s)	414, 705
EcoT38I	GRGCYC	1 cut(s)	768
ErhI	CCWWGG	2 cut(s)	414, 705
FaeI	CATG	2 cut(s)	301, 598
FaiI	YATR	8 cut(s)	299, 324, 381, 458, 468, 596, 623, 779
FatI	CATG	2 cut(s)	297, 594
Fnu4HI	GCNGC	2 cut(s)	240, 243
FokI	GGATG	2 cut(s)	208, 458
FriOI	GRGCYC	1 cut(s)	768
Fsp4HI	GCNGC	2 cut(s)	240, 243
FspBI	CTAG	1 cut(s)	395
GlaI	GCGC	3 cut(s)	90, 110, 122
GluI	GCNGC	2 cut(s)	240, 243
HaeII	RGCGCY	1 cut(s)	124
HaeIII	GGCC	4 cut(s)	5, 405, 530, 696
HapII	CCGG	3 cut(s)	74, 146, 152
HhaI	GCGC	3 cut(s)	91, 111, 123
Hin1II	CATG	2 cut(s)	301, 598
Hin6I	GCGC	3 cut(s)	89, 109, 121
HinP1I	GCGC	3 cut(s)	89, 109, 121
HinfI	GANTC	2 cut(s)	167, 745
HpaII	CCGG	3 cut(s)	74, 146, 152
HphI	GGTGA	2 cut(s)	42, 530
Hpy166II	GTNNAC	1 cut(s)	671
Hpy188I	TCNGA	3 cut(s)	59, 105, 166
Hpy188III	TCNNGA	5 cut(s)	146, 347, 557, 647, 772
Hpy8I	GTNNAC	1 cut(s)	671
Hpy99I	CGWCG	2 cut(s)	23, 84
HpyAV	CCTTC	2 cut(s)	106, 609
HpyCH4III	ACNGT	1 cut(s)	430
HpyCH4IV	ACGT	2 cut(s)	79, 472
HpyCH4V	TGCA	4 cut(s)	176, 242, 252, 365
HpyF3I	CTNAG	4 cut(s)	13, 555, 648, 719
HpySE526I	ACGT	2 cut(s)	79, 472
Hsp92II	CATG	2 cut(s)	301, 598
HspAI	GCGC	3 cut(s)	89, 109, 121
Kpn2I	TCCGGA	1 cut(s)	145
Kzo9I	GATC	3 cut(s)	551, 618, 774
Lsp1109I	GCAGC	2 cut(s)	226, 254
LweI	GCATC	3 cut(s)	96, 290, 374
MaeI	CTAG	1 cut(s)	395
MaeII	ACGT	2 cut(s)	79, 472
MaeIII	GTNAC	1 cut(s)	449
MalI	GATC	3 cut(s)	553, 620, 776
MboI	GATC	3 cut(s)	551, 618, 774
MboII	GAAGA	7 cut(s)	36, 39, 57, 128, 216, 365, 740
MflI	RGATCY	1 cut(s)	551
MhlI	GDGCHC	2 cut(s)	630, 768
MluCI	AATT	3 cut(s)	158, 287, 539
MlyI	GAGTC	1 cut(s)	739
MmeI	TCCRAC	1 cut(s)	37
MnlI	CCTC	6 cut(s)	16, 138, 508, 553, 571, 714
MroI	TCCGGA	1 cut(s)	145
MroXI	GAANNNNTTC	1 cut(s)	64
MspA1I	CMGCKG	1 cut(s)	40
MspI	CCGG	3 cut(s)	74, 146, 152
MspR9I	CCNGG	3 cut(s)	74, 278, 728
MvaI	CCWGG	2 cut(s)	278, 728
NciI	CCSGG	1 cut(s)	74
NdeII	GATC	3 cut(s)	551, 618, 774
NlaIII	CATG	2 cut(s)	301, 598
NlaIV	GGNNCC	3 cut(s)	150, 406, 725
NspI	RCATGY	1 cut(s)	301
PceI	AGGCCT	1 cut(s)	530
PdmI	GAANNNNTTC	1 cut(s)	64
PfeI	GAWTC	1 cut(s)	167
PkrI	GCNGC	2 cut(s)	241, 244
PleI	GAGTC	1 cut(s)	739
PpsI	GAGTC	1 cut(s)	739
PshAI	GACNNNNGTC	1 cut(s)	40
Psp124BI	GAGCTC	1 cut(s)	768
Psp6I	CCWGG	2 cut(s)	276, 726
PspGI	CCWGG	2 cut(s)	276, 726
PspN4I	GGNNCC	3 cut(s)	150, 406, 725
PspPI	GGNCC	3 cut(s)	404, 671, 694
PstI	CTGCAG	1 cut(s)	244
PstNI	CAGNNNCTG	2 cut(s)	362, 733
PsuI	RGATCY	1 cut(s)	551
RsaI	GTAC	1 cut(s)	78
RsaNI	GTAC	1 cut(s)	77
SacI	GAGCTC	1 cut(s)	768
SatI	GCNGC	2 cut(s)	240, 243
Sau3AI	GATC	3 cut(s)	551, 618, 774
Sau96I	GGNCC	3 cut(s)	404, 671, 694
SchI	GAGTC	1 cut(s)	739
ScrFI	CCNGG	3 cut(s)	74, 278, 728
SduI	GDGCHC	2 cut(s)	630, 768
SfaNI	GCATC	3 cut(s)	96, 290, 374
SfcI	CTRYAG	1 cut(s)	240
SinI	GGWCC	1 cut(s)	671
Sse9I	AATT	3 cut(s)	158, 287, 539
SseBI	AGGCCT	1 cut(s)	530
SsiI	CCGC	1 cut(s)	38
SspMI	CTAG	1 cut(s)	395
SstI	GAGCTC	1 cut(s)	768
StuI	AGGCCT	1 cut(s)	530
StyD4I	CCNGG	3 cut(s)	72, 276, 726
StyI	CCWWGG	2 cut(s)	414, 705
TaaI	ACNGT	1 cut(s)	430
TaiI	ACGT	2 cut(s)	82, 475
TaqI	TCGA	1 cut(s)	487
TaqII	GACCGA	1 cut(s)	688
TasI	AATT	3 cut(s)	158, 287, 539
TfiI	GAWTC	1 cut(s)	167
TseI	GCWGC	2 cut(s)	239, 242
TspDTI	ATGAA	2 cut(s)	210, 498
VpaK11BI	GGWCC	1 cut(s)	671
XapI	RAATTY	2 cut(s)	158, 539
XceI	RCATGY	1 cut(s)	301
XcmI	CCANNNNNNNNNTGG	1 cut(s)	415
XmnI	GAANNNNTTC	1 cut(s)	64
XspI	CTAG	1 cut(s)	395

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.