Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0013526

Physical Location & Seq

Genomic Coordinates Forward (+)

22984800 .. 22988311

Gene Structure 3512 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G216600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1173 bp

ATGGATAGAAGAAGAAGTACTTCAAAATTTAACAGTAGGCTTACTAGGCTTCTCCTTTTGCTATTCATATTCTGCTTTCGCCAAGAAACTGTGCAGTGCCAAGAAACTGAGCCTCCATCGTCGTCAAAGCAGCCCCACTTCAAGAACCAGCTTCAAAGAATCATTCTCAGCATTGTGTTGGGAGTAGTGACAGGACTAATTTGTGCCCTTCTCACTGCGCTCTTGGTCCGCTGCTTTCTCCGCTACATTAGCAGAACCCCAATTCTAAAAGGCCCTGTCATATTTTCTCCGAAAATCGATCCCAAGACACTCCAATTGGCATTAACTAATGAAAACCAGTTACTGGGTTCTAGCCCAAATGGCAAGTACTACAGGACTGTTCTTGACAATGGGCTTATCATTGCAGTCAAGCAGCTTGGACCCTTTTCCGAGTGTAGTTCGCCAGAGTCTCAGAGCAAGTCGGTGAAGAGGCGAATACAGCAGGAGCTTGAAGTTCTTGCTGGCCTGAGGCATAGGCATTTGATGAGCCTGAGGGCTTATGTTCGTGAACACGATAGGTTCTCTTTGGTTTATGATTTTGTGCCCAATGGGAGCCTAGAGGATGCTATGAATAGAGTTAGAGCAAACCAATTGCAGCTTGGTTGGGAAGTTCGGCTTCGGGTTGCAGTTGGGGTGATTAAGGGGCTTCAGTATCTTCACTCGTATGTTCCTCAGATTATGCACTACAACTTAAAGCCTACAAATGTTATGTTGGATTCGGAGTTTGAACCGAGATTGGGAGATTATGGGTTGGCCAAGCTTACGCCTTATTTGGATGGAGCAACATCTGGCTACAGCGCTCCAGAGTGTTTCCAGAATGGCAGGTACAGTGATAAGAGCGACATCTTCAGCTTTGGGATGATATTGGGTGTTTTATTAACTGGTAGAGACCCAACTGACGCCTTCTTTGGGGAAGCAGCTAGTGGTGGAAGTTTAGGACGGTGGCTGCGGCACTTGCAGCAAGCCGGGGAGGCACGGGAAGCATTAGATAAGAGTATAATAGGGGAAGAGGGGGAGGAAGATGAGATGTTGATGGCAGTGAGAATTGCTGTTGTATGTCTATCAGATTTGCCAGCAGAGAGGCCCTCAAGTGATGAGCTTGTTCACATGCTAACCCAACTGCACAGTTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005102 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0008150 GO:0009888 GO:0009909 GO:0010073 GO:0010075 GO:0016020 GO:0032501 GO:0032502 GO:0033612 GO:0040008 GO:0044464 GO:0048507 GO:0048509 GO:0048580 GO:0048638 GO:0048831 GO:0048856 GO:0050789 GO:0050793 GO:0051239 GO:0065007 GO:0071944 GO:2000026 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04010 ko04064 ko04620 ko04621 ko04624 ko04722 ko05133 ko05140 ko05142 ko05145 ko05152 ko05162 ko05164 map04010 map04064 map04620 map04621 map04624 map04722 map05133 map05140 map05142 map05145 map05152 map05162 map05164

Pfam Domains

Protein Families

Pkinase

Protein Analysis

391

Amino Acids

43.89

Weight (kDa)

8.6

Isoelectric Point (pI)

50.81

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0013526)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G13290 AT5G13290 AT5G13290
fragaria_vesca	FvH4_4g22780
malus_domestica	MD13G1129700.v1.1 MD16G1130000.v1.1
prunus_persica	Prupe.1G216600_v2.0.a1 Prupe.1G216600_v2.0.a1
pyrus_communis	pycom16g11060
rosa_chinensis	RchiOBHm_Chr4g0429001
rosa_laevigata	RLG00000007105
rosa_multiflora	Rmu_sc0008629.1_g000015 Rmu_sc0008629.1_g000016
rosa_roxburghii	Rroxscaffold_5G00370660
rosa_rugosa	Rorug04G0231900
rosa_samantha	Rh4BG294100 Rh4CG309600 Rh4DG291000

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	852
AccB7I	CCANNNNNTGG	1 cut(s)	343
AciI	CCGC	3 cut(s)	229, 241, 988
AclWI	GGATC	1 cut(s)	293
AcoI	YGGCCR	1 cut(s)	792
AcsI	RAATTY	1 cut(s)	26
AcuI	CTGAAG	2 cut(s)	671, 871
AcyI	GRCGYC	1 cut(s)	939
AfaI	GTAC	3 cut(s)	19, 368, 866
AfeI	AGCGCT	1 cut(s)	838
AfiI	CCNNNNNNNGG	3 cut(s)	343, 776, 948
AgsI	TTSAA	5 cut(s)	24, 142, 155, 491, 767
AluBI	AGCT	8 cut(s)	151, 415, 487, 637, 799, 891, 959, 1138
AluI	AGCT	8 cut(s)	151, 415, 487, 637, 799, 891, 959, 1138
Alw26I	GTCTC	2 cut(s)	453, 921
AlwI	GGATC	1 cut(s)	293
AlwNI	CAGNNNCTG	1 cut(s)	343
Aor51HI	AGCGCT	1 cut(s)	838
AoxI	GGCC	4 cut(s)	271, 502, 792, 1121
ApeKI	GCWGC	7 cut(s)	130, 231, 412, 634, 956, 985, 997
ApoI	RAATTY	1 cut(s)	26
ArsI	GACNNNNNNTTYG	2 cut(s)	929, 961
Asp700I	GAANNNNTTC	1 cut(s)	19
AspLEI	GCGC	2 cut(s)	220, 839
AspS9I	GGNCC	4 cut(s)	226, 272, 419, 1122
AsuC2I	CCSGG	1 cut(s)	1006
AsuHPI	GGTGA	2 cut(s)	475, 685
AvaII	GGWCC	2 cut(s)	226, 419
AxyI	CCTNAGG	2 cut(s)	506, 530
BaeGI	GKGCMC	2 cut(s)	208, 585
BalI	TGGCCA	1 cut(s)	794
BarI	GAAGNNNNNNTAC	1 cut(s)	33
BbvI	GCAGC	7 cut(s)	142, 218, 424, 646, 968, 972, 1009
BccI	CCATC	3 cut(s)	124, 809, 1066
BcnI	CCSGG	1 cut(s)	1006
BcoDI	GTCTC	2 cut(s)	453, 921
BfaI	CTAG	4 cut(s)	45, 351, 596, 960
BfmI	CTRYAG	2 cut(s)	370, 832
BfoI	RGCGCY	1 cut(s)	840
BfuAI	ACCTGC	1 cut(s)	852
BglI	GCCNNNNNGGC	2 cut(s)	360, 1010
BisI	GCNGC	8 cut(s)	131, 232, 413, 635, 957, 986, 989, 998
BlsI	GCNGC	8 cut(s)	132, 233, 414, 636, 958, 987, 990, 999
BmcAI	AGTACT	2 cut(s)	19, 368
Bme1390I	CCNGG	1 cut(s)	1006
Bme18I	GGWCC	2 cut(s)	226, 419
BmgT120I	GGNCC	4 cut(s)	226, 272, 419, 1122
BmiI	GGNNCC	2 cut(s)	421, 593
BmrFI	CCNGG	1 cut(s)	1006
BmrI	ACTGGG	1 cut(s)	353
BmsI	GCATC	1 cut(s)	592
BmuI	ACTGGG	1 cut(s)	353
BplI	GAGNNNNNCTC	2 cut(s)	1109, 1141
BpmI	CTGGAG	1 cut(s)	825
BpuEI	CTTGAG	1 cut(s)	1111
BpuMI	CCSGG	1 cut(s)	1006
Bsa29I	ATCGAT	1 cut(s)	297
BsaHI	GRCGYC	1 cut(s)	939
BsaI	GGTCTC	1 cut(s)	921
BsaJI	CCNNGG	1 cut(s)	1005
BsaXI	ACNNNNNCTCC	2 cut(s)	97, 127
Bsc4I	CCNNNNNNNGG	3 cut(s)	343, 776, 948
Bse1I	ACTGG	3 cut(s)	337, 348, 925
Bse21I	CCTNAGG	2 cut(s)	506, 530
Bse3DI	GCAATG	1 cut(s)	399
BseCI	ATCGAT	1 cut(s)	297
BseDI	CCNNGG	1 cut(s)	1005
BseGI	GGATG	3 cut(s)	607, 820, 903
BseLI	CCNNNNNNNGG	3 cut(s)	343, 776, 948
BseMI	GCAATG	1 cut(s)	399
BseMII	CTCAG	6 cut(s)	99, 181, 464, 497, 521, 725
BseNI	ACTGG	3 cut(s)	337, 348, 925
BseSI	GKGCMC	2 cut(s)	208, 585
BseXI	GCAGC	7 cut(s)	142, 218, 424, 646, 968, 972, 1009
BsgI	GTGCAG	2 cut(s)	113, 1145
BshFI	GGCC	4 cut(s)	273, 504, 794, 1123
BshVI	ATCGAT	1 cut(s)	297
BsiSI	CCGG	1 cut(s)	1005
BslI	CCNNNNNNNGG	3 cut(s)	343, 776, 948
BsmAI	GTCTC	2 cut(s)	453, 921
BsnI	GGCC	4 cut(s)	273, 504, 794, 1123
Bso31I	GGTCTC	1 cut(s)	921
Bsp1286I	GDGCHC	2 cut(s)	208, 585
Bsp143I	GATC	1 cut(s)	298
BspACI	CCGC	3 cut(s)	229, 241, 988
BspANI	GGCC	4 cut(s)	273, 504, 794, 1123
BspCNI	CTCAG	6 cut(s)	100, 180, 463, 498, 522, 724
BspDI	ATCGAT	1 cut(s)	297
BspLI	GGNNCC	2 cut(s)	421, 593
BspMI	ACCTGC	1 cut(s)	852
BspPI	GGATC	1 cut(s)	293
BspTNI	GGTCTC	1 cut(s)	921
BsrDI	GCAATG	1 cut(s)	399
BsrI	ACTGG	3 cut(s)	337, 348, 925
BssECI	CCNNGG	1 cut(s)	1005
BssMI	GATC	1 cut(s)	298
BssNI	GRCGYC	1 cut(s)	939
Bst4CI	ACNGT	6 cut(s)	35, 91, 379, 869, 981, 1166
Bst6I	CTCTTC	2 cut(s)	461, 1041
BstACI	GRCGYC	1 cut(s)	939
BstC8I	GCNNGC	3 cut(s)	502, 1002, 1113
BstDEI	CTNAG	6 cut(s)	108, 167, 450, 506, 530, 711
BstF5I	GGATG	3 cut(s)	607, 820, 903
BstH2I	RGCGCY	1 cut(s)	840
BstHHI	GCGC	2 cut(s)	220, 839
BstKTI	GATC	1 cut(s)	301
BstMAI	GTCTC	2 cut(s)	453, 921
BstMBI	GATC	1 cut(s)	298
BstMWI	GCNNNNNNNGC	9 cut(s)	46, 240, 249, 360, 478, 994, 997, 1010, 1019
BstNSI	RCATGY	1 cut(s)	1150
BstSCI	CCNGG	1 cut(s)	1004
BstSFI	CTRYAG	2 cut(s)	370, 832
BstSLI	GKGCMC	2 cut(s)	208, 585
BstV1I	GCAGC	7 cut(s)	142, 218, 424, 646, 968, 972, 1009
Bsu15I	ATCGAT	1 cut(s)	297
Bsu36I	CCTNAGG	2 cut(s)	506, 530
BsuRI	GGCC	4 cut(s)	273, 504, 794, 1123
BsuTUI	ATCGAT	1 cut(s)	297
BtsCI	GGATG	3 cut(s)	607, 820, 903
BtsI	GCAGTG	3 cut(s)	101, 213, 1083
BtsIMutI	CAGTG	4 cut(s)	101, 213, 874, 1083
BveI	ACCTGC	1 cut(s)	852
Cac8I	GCNNGC	3 cut(s)	502, 1002, 1113
CaiI	CAGNNNCTG	1 cut(s)	343
CfoI	GCGC	2 cut(s)	220, 839
Cfr13I	GGNCC	4 cut(s)	226, 272, 419, 1122
ClaI	ATCGAT	1 cut(s)	297
CseI	GACGC	1 cut(s)	947
Csp6I	GTAC	3 cut(s)	18, 367, 865
CviAII	CATG	1 cut(s)	1147
CviQI	GTAC	3 cut(s)	18, 367, 865
DdeI	CTNAG	6 cut(s)	108, 167, 450, 506, 530, 711
DpnI	GATC	1 cut(s)	300
DpnII	GATC	1 cut(s)	298
EaeI	YGGCCR	1 cut(s)	792
Eam1104I	CTCTTC	2 cut(s)	461, 1041
EarI	CTCTTC	2 cut(s)	461, 1041
Eco31I	GGTCTC	1 cut(s)	921
Eco47I	GGWCC	2 cut(s)	226, 419
Eco47III	AGCGCT	1 cut(s)	838
Eco57I	CTGAAG	2 cut(s)	671, 871
Eco81I	CCTNAGG	2 cut(s)	506, 530
EcoO109I	RGGNCCY	2 cut(s)	272, 1122
FaeI	CATG	1 cut(s)	1150
FalI	AAGNNNNNCTT	3 cut(s)	36, 639, 671
FatI	CATG	1 cut(s)	1146
Fnu4HI	GCNGC	8 cut(s)	131, 232, 413, 635, 957, 986, 989, 998
FokI	GGATG	3 cut(s)	614, 827, 910
Fsp4HI	GCNGC	8 cut(s)	131, 232, 413, 635, 957, 986, 989, 998
FspBI	CTAG	4 cut(s)	45, 351, 596, 960
GlaI	GCGC	2 cut(s)	219, 838
GluI	GCNGC	8 cut(s)	131, 232, 413, 635, 957, 986, 989, 998
GsuI	CTGGAG	1 cut(s)	825
HaeII	RGCGCY	1 cut(s)	840
HaeIII	GGCC	4 cut(s)	273, 504, 794, 1123
HapII	CCGG	1 cut(s)	1005
HgaI	GACGC	1 cut(s)	947
HhaI	GCGC	2 cut(s)	220, 839
Hin1I	GRCGYC	1 cut(s)	939
Hin1II	CATG	1 cut(s)	1150
Hin6I	GCGC	2 cut(s)	218, 837
HinP1I	GCGC	2 cut(s)	218, 837
HindIII	AAGCTT	1 cut(s)	797
HinfI	GANTC	3 cut(s)	159, 446, 755
HpaII	CCGG	1 cut(s)	1005
HphI	GGTGA	2 cut(s)	475, 685
Hpy166II	GTNNAC	2 cut(s)	548, 1144
Hpy188I	TCNGA	6 cut(s)	291, 430, 453, 714, 760, 1105
Hpy188III	TCNNGA	5 cut(s)	142, 383, 545, 842, 853
Hpy8I	GTNNAC	2 cut(s)	548, 1144
Hpy99I	CGWCG	1 cut(s)	124
HpyAV	CCTTC	2 cut(s)	218, 952
HpyCH4III	ACNGT	6 cut(s)	35, 91, 379, 869, 981, 1166
HpyCH4V	TGCA	7 cut(s)	94, 404, 634, 665, 721, 997, 1162
HpyF10VI	GCNNNNNNNGC	9 cut(s)	46, 240, 249, 360, 478, 994, 997, 1010, 1019
HpyF3I	CTNAG	6 cut(s)	108, 167, 450, 506, 530, 711
Hsp92I	GRCGYC	1 cut(s)	939
Hsp92II	CATG	1 cut(s)	1150
HspAI	GCGC	2 cut(s)	218, 837
Kzo9I	GATC	1 cut(s)	298
LmnI	GCTCC	4 cut(s)	484, 591, 818, 844
Lsp1109I	GCAGC	7 cut(s)	142, 218, 424, 646, 968, 972, 1009
LweI	GCATC	1 cut(s)	592
MaeI	CTAG	4 cut(s)	45, 351, 596, 960
MaeIII	GTNAC	2 cut(s)	187, 339
MalI	GATC	1 cut(s)	300
MboI	GATC	1 cut(s)	298
MboII	GAAGA	7 cut(s)	21, 24, 478, 686, 877, 1058, 1070
MfeI	CAATTG	2 cut(s)	314, 629
MhlI	GDGCHC	2 cut(s)	208, 585
MlsI	TGGCCA	1 cut(s)	794
MluCI	AATT	6 cut(s)	26, 198, 261, 314, 629, 1083
MluNI	TGGCCA	1 cut(s)	794
MlyI	GAGTC	1 cut(s)	455
MmeI	TCCRAC	1 cut(s)	732
Mox20I	TGGCCA	1 cut(s)	794
MroXI	GAANNNNTTC	1 cut(s)	19
MscI	TGGCCA	1 cut(s)	794
MseI	TTAA	5 cut(s)	30, 323, 678, 731, 917
MslI	CAYNNNNRTG	1 cut(s)	702
Msp20I	TGGCCA	1 cut(s)	794
MspA1I	CMGCKG	1 cut(s)	231
MspI	CCGG	1 cut(s)	1005
MspR9I	CCNGG	1 cut(s)	1006
MunI	CAATTG	2 cut(s)	314, 629
MwoI	GCNNNNNNNGC	9 cut(s)	46, 240, 249, 360, 478, 994, 997, 1010, 1019
NciI	CCSGG	1 cut(s)	1006
NdeII	GATC	1 cut(s)	298
NlaIII	CATG	1 cut(s)	1150
NlaIV	GGNNCC	2 cut(s)	421, 593
NmuCI	GTSAC	1 cut(s)	187
NspI	RCATGY	1 cut(s)	1150
PdmI	GAANNNNTTC	1 cut(s)	19
PfeI	GAWTC	2 cut(s)	159, 755
PflMI	CCANNNNNTGG	1 cut(s)	343
PkrI	GCNGC	8 cut(s)	132, 233, 414, 636, 958, 987, 990, 999
PleI	GAGTC	1 cut(s)	454
PpsI	GAGTC	1 cut(s)	454
PspN4I	GGNNCC	2 cut(s)	421, 593
PspPI	GGNCC	4 cut(s)	226, 272, 419, 1122
PstNI	CAGNNNCTG	1 cut(s)	343
RsaI	GTAC	3 cut(s)	19, 368, 866
RsaNI	GTAC	3 cut(s)	18, 367, 865
RseI	CAYNNNNRTG	1 cut(s)	702
SaqAI	TTAA	5 cut(s)	30, 323, 678, 731, 917
SatI	GCNGC	8 cut(s)	131, 232, 413, 635, 957, 986, 989, 998
Sau3AI	GATC	1 cut(s)	298
Sau96I	GGNCC	4 cut(s)	226, 272, 419, 1122
ScaI	AGTACT	2 cut(s)	19, 368
SchI	GAGTC	1 cut(s)	455
ScrFI	CCNGG	1 cut(s)	1006
SduI	GDGCHC	2 cut(s)	208, 585
SfaNI	GCATC	1 cut(s)	592
SfcI	CTRYAG	2 cut(s)	370, 832
SinI	GGWCC	2 cut(s)	226, 419
SmiMI	CAYNNNNRTG	1 cut(s)	702
SmlI	CTYRAG	1 cut(s)	1126
SmoI	CTYRAG	1 cut(s)	1126
Sse9I	AATT	6 cut(s)	26, 198, 261, 314, 629, 1083
SsiI	CCGC	3 cut(s)	229, 241, 988
SspMI	CTAG	4 cut(s)	45, 351, 596, 960
StyD4I	CCNGG	1 cut(s)	1004
TaaI	ACNGT	6 cut(s)	35, 91, 379, 869, 981, 1166
TaqI	TCGA	1 cut(s)	297
TasI	AATT	6 cut(s)	26, 198, 261, 314, 629, 1083
TatI	WGTACW	2 cut(s)	17, 366
TauI	GCSGC	1 cut(s)	991
TfiI	GAWTC	2 cut(s)	159, 755
Tru1I	TTAA	5 cut(s)	30, 323, 678, 731, 917
Tru9I	TTAA	5 cut(s)	30, 323, 678, 731, 917
TscAI	CASTG	4 cut(s)	101, 220, 874, 1083
TseFI	GTSAC	1 cut(s)	187
TseI	GCWGC	7 cut(s)	130, 231, 412, 634, 956, 985, 997
Tsp45I	GTSAC	1 cut(s)	187
TspDTI	ATGAA	3 cut(s)	55, 345, 623
TspRI	CASTG	4 cut(s)	101, 220, 874, 1083
Van91I	CCANNNNNTGG	1 cut(s)	343
VpaK11BI	GGWCC	2 cut(s)	226, 419
XapI	RAATTY	1 cut(s)	26
XceI	RCATGY	1 cut(s)	1150
XcmI	CCANNNNNNNNNTGG	1 cut(s)	635
XmnI	GAANNNNTTC	1 cut(s)	19
XspI	CTAG	4 cut(s)	45, 351, 596, 960
ZrmI	AGTACT	2 cut(s)	19, 368

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.