BAR domain of APPL family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G13290 AT5G13290 AT5G13290 |
| fragaria_vesca | FvH4_4g22780 |
| malus_domestica | MD13G1129700.v1.1 MD16G1130000.v1.1 |
| prunus_persica | Prupe.1G216600_v2.0.a1 Prupe.1G216600_v2.0.a1 |
| pyrus_communis | pycom16g11060 |
| rosa_chinensis | RchiOBHm_Chr4g0429001 |
| rosa_laevigata | RLG00000007105 |
| rosa_multiflora | Rmu_sc0008629.1_g000015 Rmu_sc0008629.1_g000016 |
| rosa_roxburghii | Rroxscaffold_5G00370660 |
| rosa_rugosa | Rorug04G0231900 |
| rosa_samantha | Rh4BG294100 Rh4CG309600 Rh4DG291000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 1476 |
| AccII | CGCG | 1 cut(s) | 549 |
| AciI | CCGC | 3 cut(s) | 991, 1079, 1344 |
| AclWI | GGATC | 2 cut(s) | 935, 1205 |
| AcsI | RAATTY | 1 cut(s) | 25 |
| AcuI | CTGAAG | 2 cut(s) | 674, 1332 |
| AfaI | GTAC | 3 cut(s) | 19, 371, 869 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 474, 779, 950, 951, 1045, 1186, 1405, 1420 |
| AgsI | TTSAA | 7 cut(s) | 24, 31, 158, 736, 770, 1218, 1325 |
| AjnI | CCWGG | 1 cut(s) | 597 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1394, 1426 |
| AluBI | AGCT | 9 cut(s) | 154, 418, 490, 640, 802, 894, 1233, 1321, 1366 |
| AluI | AGCT | 9 cut(s) | 154, 418, 490, 640, 802, 894, 1233, 1321, 1366 |
| Alw21I | GWGCWC | 1 cut(s) | 555 |
| Alw26I | GTCTC | 3 cut(s) | 505, 924, 1265 |
| AlwI | GGATC | 2 cut(s) | 935, 1205 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 490 |
| AoxI | GGCC | 2 cut(s) | 274, 505 |
| ApaI | GGGCCC | 1 cut(s) | 278 |
| ApeKI | GCWGC | 7 cut(s) | 49, 415, 637, 988, 1000, 1346, 1366 |
| ApoI | RAATTY | 1 cut(s) | 25 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 19 |
| AspS9I | GGNCC | 2 cut(s) | 274, 275 |
| AsuHPI | GGTGA | 4 cut(s) | 435, 688, 1093, 1333 |
| AxyI | CCTNAGG | 1 cut(s) | 447 |
| BaeGI | GKGCMC | 2 cut(s) | 278, 588 |
| BanII | GRGCYC | 4 cut(s) | 278, 359, 399, 426 |
| BbsI | GAAGAC | 1 cut(s) | 1402 |
| Bbv12I | GWGCWC | 1 cut(s) | 555 |
| BbvI | GCAGC | 7 cut(s) | 36, 427, 649, 975, 1012, 1353, 1358 |
| BccI | CCATC | 1 cut(s) | 124 |
| BceAI | ACGGC | 1 cut(s) | 106 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 1150, 1184 |
| BciT130I | CCWGG | 1 cut(s) | 599 |
| BciVI | GTATCC | 2 cut(s) | 471, 1317 |
| BcoDI | GTCTC | 3 cut(s) | 505, 924, 1265 |
| BfaI | CTAG | 3 cut(s) | 45, 1385, 1480 |
| BfmI | CTRYAG | 3 cut(s) | 373, 1367, 1416 |
| BfuI | GTATCC | 2 cut(s) | 471, 1317 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 363 |
| BisI | GCNGC | 8 cut(s) | 50, 416, 638, 989, 992, 1001, 1347, 1367 |
| BlpI | GCTNAGC | 1 cut(s) | 798 |
| BlsI | GCNGC | 8 cut(s) | 51, 417, 639, 990, 993, 1002, 1348, 1368 |
| BmcAI | AGTACT | 2 cut(s) | 19, 371 |
| Bme1390I | CCNGG | 1 cut(s) | 599 |
| BmgT120I | GGNCC | 2 cut(s) | 274, 275 |
| BmiI | GGNNCC | 3 cut(s) | 276, 423, 596 |
| BmrFI | CCNGG | 1 cut(s) | 599 |
| BmrI | ACTGGG | 1 cut(s) | 257 |
| BmsI | GCATC | 4 cut(s) | 595, 748, 1276, 1285 |
| BmuI | ACTGGG | 1 cut(s) | 257 |
| BpiI | GAAGAC | 1 cut(s) | 1402 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 425, 457 |
| BpmI | CTGGAG | 4 cut(s) | 440, 620, 828, 987 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 798 |
| BpuEI | CTTGAG | 3 cut(s) | 254, 1114, 1169 |
| BsaI | GGTCTC | 1 cut(s) | 924 |
| BsaJI | CCNNGG | 2 cut(s) | 773, 1155 |
| BsaWI | WCCGGW | 1 cut(s) | 194 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 97, 122, 127, 152, 617, 647 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 474, 779, 950, 951, 1045, 1186, 1405, 1420 |
| Bse1I | ACTGG | 5 cut(s) | 263, 330, 928, 970, 1360 |
| Bse21I | CCTNAGG | 1 cut(s) | 447 |
| BseBI | CCWGG | 1 cut(s) | 599 |
| BseDI | CCNNGG | 2 cut(s) | 773, 1155 |
| BseGI | GGATG | 3 cut(s) | 610, 763, 906 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 474, 779, 950, 951, 1045, 1186, 1405, 1420 |
| BseMII | CTCAG | 7 cut(s) | 99, 438, 467, 500, 655, 728, 753 |
| BseNI | ACTGG | 5 cut(s) | 263, 330, 928, 970, 1360 |
| BseRI | GAGGAG | 2 cut(s) | 1296, 1455 |
| BseSI | GKGCMC | 2 cut(s) | 278, 588 |
| BseXI | GCAGC | 7 cut(s) | 36, 427, 649, 975, 1012, 1353, 1358 |
| Bsh1236I | CGCG | 1 cut(s) | 549 |
| BshFI | GGCC | 2 cut(s) | 276, 507 |
| BsiHKAI | GWGCWC | 1 cut(s) | 555 |
| BsiSI | CCGG | 3 cut(s) | 195, 1256, 1457 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 474, 779, 950, 951, 1045, 1186, 1405, 1420 |
| BsmAI | GTCTC | 3 cut(s) | 505, 924, 1265 |
| BsnI | GGCC | 2 cut(s) | 276, 507 |
| Bso31I | GGTCTC | 1 cut(s) | 924 |
| Bsp120I | GGGCCC | 1 cut(s) | 274 |
| Bsp1286I | GDGCHC | 6 cut(s) | 278, 359, 399, 426, 555, 588 |
| Bsp143I | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 798 |
| Bsp68I | TCGCGA | 1 cut(s) | 549 |
| BspACI | CCGC | 3 cut(s) | 991, 1079, 1344 |
| BspANI | GGCC | 2 cut(s) | 276, 507 |
| BspCNI | CTCAG | 7 cut(s) | 100, 439, 466, 501, 654, 727, 754 |
| BspFNI | CGCG | 1 cut(s) | 549 |
| BspLI | GGNNCC | 3 cut(s) | 276, 423, 596 |
| BspMAI | CTGCAG | 2 cut(s) | 1371, 1420 |
| BspPI | GGATC | 2 cut(s) | 935, 1205 |
| BspTNI | GGTCTC | 1 cut(s) | 924 |
| BsrI | ACTGG | 5 cut(s) | 263, 330, 928, 970, 1360 |
| BssECI | CCNNGG | 2 cut(s) | 773, 1155 |
| BssMI | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| BssNAI | GTATAC | 1 cut(s) | 1477 |
| BssT1I | CCWWGG | 1 cut(s) | 1155 |
| Bst1107I | GTATAC | 1 cut(s) | 1477 |
| Bst2UI | CCWGG | 1 cut(s) | 599 |
| Bst4CI | ACNGT | 6 cut(s) | 91, 382, 984, 1222, 1276, 1408 |
| BstC8I | GCNNGC | 6 cut(s) | 501, 505, 551, 1005, 1116, 1454 |
| BstDEI | CTNAG | 9 cut(s) | 108, 170, 447, 453, 509, 641, 714, 762, 798 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1184 |
| BstF5I | GGATG | 3 cut(s) | 610, 763, 906 |
| BstFNI | CGCG | 1 cut(s) | 549 |
| BstKTI | GATC | 4 cut(s) | 943, 1213, 1341, 1435 |
| BstMAI | GTCTC | 3 cut(s) | 505, 924, 1265 |
| BstMBI | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| BstNI | CCWGG | 1 cut(s) | 599 |
| BstNSI | RCATGY | 1 cut(s) | 1007 |
| BstSCI | CCNGG | 1 cut(s) | 597 |
| BstSFI | CTRYAG | 3 cut(s) | 373, 1367, 1416 |
| BstSLI | GKGCMC | 2 cut(s) | 278, 588 |
| BstUI | CGCG | 1 cut(s) | 549 |
| BstV1I | GCAGC | 7 cut(s) | 36, 427, 649, 975, 1012, 1353, 1358 |
| BstV2I | GAAGAC | 1 cut(s) | 1402 |
| BstZ17I | GTATAC | 1 cut(s) | 1477 |
| Bsu36I | CCTNAGG | 1 cut(s) | 447 |
| BsuI | GTATCC | 2 cut(s) | 471, 1317 |
| BsuRI | GGCC | 2 cut(s) | 276, 507 |
| BtgZI | GCGATG | 1 cut(s) | 102 |
| BtsCI | GGATG | 3 cut(s) | 610, 763, 906 |
| BtsI | GCAGTG | 3 cut(s) | 232, 414, 837 |
| BtsIMutI | CAGTG | 6 cut(s) | 101, 232, 323, 414, 837, 870 |
| BtuMI | TCGCGA | 1 cut(s) | 549 |
| Cac8I | GCNNGC | 6 cut(s) | 501, 505, 551, 1005, 1116, 1454 |
| CaiI | CAGNNNCTG | 1 cut(s) | 490 |
| Cfr13I | GGNCC | 2 cut(s) | 274, 275 |
| Csp6I | GTAC | 3 cut(s) | 18, 370, 868 |
| CviAII | CATG | 2 cut(s) | 701, 1004 |
| CviQI | GTAC | 3 cut(s) | 18, 370, 868 |
| DdeI | CTNAG | 9 cut(s) | 108, 170, 447, 453, 509, 641, 714, 762, 798 |
| DpnI | GATC | 4 cut(s) | 942, 1212, 1340, 1434 |
| DpnII | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| Eco130I | CCWWGG | 1 cut(s) | 1155 |
| Eco24I | GRGCYC | 4 cut(s) | 278, 359, 399, 426 |
| Eco31I | GGTCTC | 1 cut(s) | 924 |
| Eco57I | CTGAAG | 2 cut(s) | 674, 1332 |
| Eco81I | CCTNAGG | 1 cut(s) | 447 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1184 |
| EcoO109I | RGGNCCY | 2 cut(s) | 274, 275 |
| EcoRII | CCWGG | 1 cut(s) | 597 |
| EcoT14I | CCWWGG | 1 cut(s) | 1155 |
| EcoT22I | ATGCAT | 2 cut(s) | 706, 726 |
| EcoT38I | GRGCYC | 4 cut(s) | 278, 359, 399, 426 |
| ErhI | CCWWGG | 1 cut(s) | 1155 |
| FaeI | CATG | 2 cut(s) | 704, 1007 |
| FalI | AAGNNNNNCTT | 5 cut(s) | 36, 1305, 1337, 1394, 1426 |
| FatI | CATG | 2 cut(s) | 700, 1003 |
| FauNDI | CATATG | 1 cut(s) | 706 |
| FblI | GTMKAC | 1 cut(s) | 1476 |
| Fnu4HI | GCNGC | 8 cut(s) | 50, 416, 638, 989, 992, 1001, 1347, 1367 |
| FokI | GGATG | 3 cut(s) | 617, 770, 913 |
| FriOI | GRGCYC | 4 cut(s) | 278, 359, 399, 426 |
| Fsp4HI | GCNGC | 8 cut(s) | 50, 416, 638, 989, 992, 1001, 1347, 1367 |
| FspBI | CTAG | 3 cut(s) | 45, 1385, 1480 |
| GluI | GCNGC | 8 cut(s) | 50, 416, 638, 989, 992, 1001, 1347, 1367 |
| GsuI | CTGGAG | 4 cut(s) | 440, 620, 828, 987 |
| HaeIII | GGCC | 2 cut(s) | 276, 507 |
| HapII | CCGG | 3 cut(s) | 195, 1256, 1457 |
| Hin1II | CATG | 2 cut(s) | 704, 1007 |
| HindIII | AAGCTT | 1 cut(s) | 1319 |
| HinfI | GANTC | 5 cut(s) | 39, 162, 198, 337, 628 |
| HpaII | CCGG | 3 cut(s) | 195, 1256, 1457 |
| HphI | GGTGA | 4 cut(s) | 435, 688, 1093, 1333 |
| Hpy166II | GTNNAC | 4 cut(s) | 232, 870, 1147, 1477 |
| Hpy188III | TCNNGA | 6 cut(s) | 548, 845, 856, 1171, 1310, 1385 |
| Hpy8I | GTNNAC | 4 cut(s) | 232, 870, 1147, 1477 |
| HpyAV | CCTTC | 4 cut(s) | 468, 955, 1046, 1224 |
| HpyCH4III | ACNGT | 6 cut(s) | 91, 382, 984, 1222, 1276, 1408 |
| HpyF3I | CTNAG | 9 cut(s) | 108, 170, 447, 453, 509, 641, 714, 762, 798 |
| Hsp92II | CATG | 2 cut(s) | 704, 1007 |
| Kzo9I | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| LmnI | GCTCC | 8 cut(s) | 63, 307, 318, 421, 487, 594, 847, 1238 |
| Lsp1109I | GCAGC | 7 cut(s) | 36, 427, 649, 975, 1012, 1353, 1358 |
| LweI | GCATC | 4 cut(s) | 595, 748, 1276, 1285 |
| MaeI | CTAG | 3 cut(s) | 45, 1385, 1480 |
| MaeIII | GTNAC | 2 cut(s) | 833, 1201 |
| MalI | GATC | 4 cut(s) | 942, 1212, 1340, 1434 |
| MboI | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| MboII | GAAGA | 7 cut(s) | 24, 689, 1061, 1073, 1159, 1348, 1402 |
| MhlI | GDGCHC | 6 cut(s) | 278, 359, 399, 426, 555, 588 |
| MluCI | AATT | 4 cut(s) | 25, 282, 317, 1086 |
| MlyI | GAGTC | 1 cut(s) | 192 |
| MmeI | TCCRAC | 2 cut(s) | 735, 1258 |
| Mph1103I | ATGCAT | 2 cut(s) | 706, 726 |
| MroXI | GAANNNNTTC | 1 cut(s) | 19 |
| MseI | TTAA | 3 cut(s) | 86, 681, 1073 |
| MslI | CAYNNNNRTG | 1 cut(s) | 705 |
| MspA1I | CMGCKG | 1 cut(s) | 418 |
| MspI | CCGG | 3 cut(s) | 195, 1256, 1457 |
| MspR9I | CCNGG | 1 cut(s) | 599 |
| MvaI | CCWGG | 1 cut(s) | 599 |
| MvnI | CGCG | 1 cut(s) | 549 |
| NdeI | CATATG | 1 cut(s) | 706 |
| NdeII | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| NlaIII | CATG | 2 cut(s) | 704, 1007 |
| NlaIV | GGNNCC | 3 cut(s) | 276, 423, 596 |
| NmeAIII | GCCGAG | 1 cut(s) | 765 |
| NmuCI | GTSAC | 1 cut(s) | 1201 |
| NruI | TCGCGA | 1 cut(s) | 549 |
| NsiI | ATGCAT | 2 cut(s) | 706, 726 |
| NspI | RCATGY | 1 cut(s) | 1007 |
| PaeI | GCATGC | 1 cut(s) | 1007 |
| PdmI | GAANNNNTTC | 1 cut(s) | 19 |
| PfeI | GAWTC | 4 cut(s) | 39, 162, 337, 628 |
| PkrI | GCNGC | 8 cut(s) | 51, 417, 639, 990, 993, 1002, 1348, 1368 |
| PleI | GAGTC | 1 cut(s) | 192 |
| PpsI | GAGTC | 1 cut(s) | 192 |
| Psp6I | CCWGG | 1 cut(s) | 597 |
| PspGI | CCWGG | 1 cut(s) | 597 |
| PspN4I | GGNNCC | 3 cut(s) | 276, 423, 596 |
| PspOMI | GGGCCC | 1 cut(s) | 274 |
| PspPI | GGNCC | 2 cut(s) | 274, 275 |
| PstI | CTGCAG | 2 cut(s) | 1371, 1420 |
| PstNI | CAGNNNCTG | 1 cut(s) | 490 |
| PvuII | CAGCTG | 1 cut(s) | 418 |
| RruI | TCGCGA | 1 cut(s) | 549 |
| RsaI | GTAC | 3 cut(s) | 19, 371, 869 |
| RsaNI | GTAC | 3 cut(s) | 18, 370, 868 |
| RseI | CAYNNNNRTG | 1 cut(s) | 705 |
| SaqAI | TTAA | 3 cut(s) | 86, 681, 1073 |
| SatI | GCNGC | 8 cut(s) | 50, 416, 638, 989, 992, 1001, 1347, 1367 |
| Sau3AI | GATC | 4 cut(s) | 940, 1210, 1338, 1432 |
| Sau96I | GGNCC | 2 cut(s) | 274, 275 |
| ScaI | AGTACT | 2 cut(s) | 19, 371 |
| SchI | GAGTC | 1 cut(s) | 192 |
| ScrFI | CCNGG | 1 cut(s) | 599 |
| SduI | GDGCHC | 6 cut(s) | 278, 359, 399, 426, 555, 588 |
| SfaNI | GCATC | 4 cut(s) | 595, 748, 1276, 1285 |
| SfcI | CTRYAG | 3 cut(s) | 373, 1367, 1416 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 705 |
| SmlI | CTYRAG | 3 cut(s) | 269, 1129, 1184 |
| SmoI | CTYRAG | 3 cut(s) | 269, 1129, 1184 |
| SphI | GCATGC | 1 cut(s) | 1007 |
| Sse9I | AATT | 4 cut(s) | 25, 282, 317, 1086 |
| SsiI | CCGC | 3 cut(s) | 991, 1079, 1344 |
| SspMI | CTAG | 3 cut(s) | 45, 1385, 1480 |
| StyD4I | CCNGG | 1 cut(s) | 597 |
| StyI | CCWWGG | 1 cut(s) | 1155 |
| TaaI | ACNGT | 6 cut(s) | 91, 382, 984, 1222, 1276, 1408 |
| TaqI | TCGA | 2 cut(s) | 353, 1170 |
| TasI | AATT | 4 cut(s) | 25, 282, 317, 1086 |
| TatI | WGTACW | 2 cut(s) | 17, 369 |
| TauI | GCSGC | 1 cut(s) | 994 |
| TfiI | GAWTC | 4 cut(s) | 39, 162, 337, 628 |
| Tru1I | TTAA | 3 cut(s) | 86, 681, 1073 |
| Tru9I | TTAA | 3 cut(s) | 86, 681, 1073 |
| TscAI | CASTG | 6 cut(s) | 101, 239, 330, 414, 844, 877 |
| TseFI | GTSAC | 1 cut(s) | 1201 |
| TseI | GCWGC | 7 cut(s) | 49, 415, 637, 988, 1000, 1346, 1366 |
| Tsp45I | GTSAC | 1 cut(s) | 1201 |
| TspDTI | ATGAA | 5 cut(s) | 214, 626, 689, 1080, 1152 |
| TspRI | CASTG | 6 cut(s) | 101, 239, 330, 414, 844, 877 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1184 |
| XapI | RAATTY | 1 cut(s) | 25 |
| XbaI | TCTAGA | 1 cut(s) | 1384 |
| XceI | RCATGY | 1 cut(s) | 1007 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 595 |
| XmiI | GTMKAC | 1 cut(s) | 1476 |
| XmnI | GAANNNNTTC | 1 cut(s) | 19 |
| XspI | CTAG | 3 cut(s) | 45, 1385, 1480 |
| ZrmI | AGTACT | 2 cut(s) | 19, 371 |
| Zsp2I | ATGCAT | 2 cut(s) | 706, 726 |