Methyltransferase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26850 AT1G26850 AT1G26850 |
| fragaria_vesca | FvH4_4g31440 FvH4_4g31440 FvH4_4g31440 FvH4_5g15080 |
| malus_domestica | MD06G1192300.v1.1 MD13G1072700.v1.1 MD14G1198900.v1.1 MD16G1073500.v1.1 |
| prunus_persica | Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.5G192000_v2.0.a1 Prupe.5G192000_v2.0.a1 |
| pyrus_communis | pycom06g17040 pycom13g06520 pycom14g16510 pycom16g06360 |
| rosa_chinensis | RchiOBHm_Chr4g0439921 RchiOBHm_Chr7g0181131 |
| rosa_laevigata | RLG00000005211 RLG00000006225 |
| rosa_multiflora | Rmu_sc0001147.1_g000019 Rmu_sc0022459.1_g000002 |
| rosa_roxburghii | Rroxscaffold_3G00272250 Rroxscaffold_5G00380870 |
| rosa_rugosa | Rorug04G0322400 Rorug04G0322500 Rorug06G0438700 |
| rosa_samantha | Rh4AG373400 Rh4BG385700 Rh4CG400200 Rh4DG380000 Rh7AG040600 Rh7BG040000 Rh7CG042000 Rh7DG040400 |
| rosa_wichuraiana | Rw4G031930 Rw7G003350 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1814 |
| Acc36I | ACCTGC | 1 cut(s) | 1814 |
| AccB1I | GGYRCC | 1 cut(s) | 1673 |
| AccIII | TCCGGA | 2 cut(s) | 358, 1286 |
| AciI | CCGC | 1 cut(s) | 1663 |
| AclWI | GGATC | 2 cut(s) | 496, 509 |
| AcoI | YGGCCR | 2 cut(s) | 422, 1664 |
| AcsI | RAATTY | 1 cut(s) | 1656 |
| AfaI | GTAC | 6 cut(s) | 45, 444, 665, 1257, 1610, 1814 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 361, 511, 539 |
| AgsI | TTSAA | 5 cut(s) | 191, 253, 482, 743, 1439 |
| AjnI | CCWGG | 3 cut(s) | 419, 532, 895 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1397, 1429 |
| AloI | GAACNNNNNNTCC | 3 cut(s) | 535, 567, 1823 |
| Alw21I | GWGCWC | 1 cut(s) | 41 |
| Alw26I | GTCTC | 2 cut(s) | 340, 1086 |
| AlwI | GGATC | 2 cut(s) | 496, 509 |
| Aor13HI | TCCGGA | 2 cut(s) | 358, 1286 |
| AoxI | GGCC | 4 cut(s) | 422, 893, 1302, 1664 |
| ApeKI | GCWGC | 5 cut(s) | 787, 958, 1211, 1427, 1430 |
| ApoI | RAATTY | 1 cut(s) | 1656 |
| AseI | ATTAAT | 1 cut(s) | 1367 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1635 |
| AspLEI | GCGC | 1 cut(s) | 394 |
| AspS9I | GGNCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| AsuHPI | GGTGA | 3 cut(s) | 218, 1058, 1726 |
| AvaII | GGWCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| BaeGI | GKGCMC | 1 cut(s) | 1473 |
| BalI | TGGCCA | 1 cut(s) | 424 |
| BamHI | GGATCC | 1 cut(s) | 501 |
| BanI | GGYRCC | 1 cut(s) | 1673 |
| BanII | GRGCYC | 1 cut(s) | 41 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 357, 389 |
| BbsI | GAAGAC | 1 cut(s) | 1638 |
| Bbv12I | GWGCWC | 1 cut(s) | 41 |
| BbvI | GCAGC | 5 cut(s) | 774, 970, 1198, 1414, 1442 |
| BccI | CCATC | 8 cut(s) | 17, 805, 851, 1199, 1607, 1642, 1734, 1763 |
| BceAI | ACGGC | 3 cut(s) | 417, 1130, 1661 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 989, 1023 |
| BciT130I | CCWGG | 3 cut(s) | 421, 534, 897 |
| BciVI | GTATCC | 1 cut(s) | 1738 |
| BclI | TGATCA | 1 cut(s) | 577 |
| BcoDI | GTCTC | 2 cut(s) | 340, 1086 |
| BfaI | CTAG | 3 cut(s) | 33, 1263, 1272 |
| BfmI | CTRYAG | 2 cut(s) | 756, 1428 |
| BfoI | RGCGCY | 1 cut(s) | 395 |
| BfuAI | ACCTGC | 1 cut(s) | 1814 |
| BfuI | GTATCC | 1 cut(s) | 1738 |
| BisI | GCNGC | 6 cut(s) | 788, 959, 1212, 1428, 1431, 1664 |
| BlsI | GCNGC | 6 cut(s) | 789, 960, 1213, 1429, 1432, 1665 |
| BmcAI | AGTACT | 1 cut(s) | 1814 |
| Bme1390I | CCNGG | 3 cut(s) | 421, 534, 897 |
| Bme18I | GGWCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| BmgT120I | GGNCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| BmiI | GGNNCC | 5 cut(s) | 503, 530, 1230, 1675, 1774 |
| BmrFI | CCNGG | 3 cut(s) | 421, 534, 897 |
| BmrI | ACTGGG | 1 cut(s) | 1825 |
| BmsI | GCATC | 1 cut(s) | 1132 |
| BmuI | ACTGGG | 1 cut(s) | 1825 |
| BpiI | GAAGAC | 1 cut(s) | 1638 |
| BpmI | CTGGAG | 1 cut(s) | 1247 |
| BpuEI | CTTGAG | 2 cut(s) | 540, 998 |
| Bsa29I | ATCGAT | 1 cut(s) | 222 |
| BsaBI | GATNNNNATC | 1 cut(s) | 1526 |
| BsaJI | CCNNGG | 8 cut(s) | 320, 419, 532, 842, 896, 965, 1565, 1591 |
| BsaWI | WCCGGW | 2 cut(s) | 358, 1286 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 1019, 1049, 1281, 1311, 1823 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 361, 511, 539 |
| Bse1I | ACTGG | 6 cut(s) | 503, 633, 640, 651, 1544, 1820 |
| Bse3DI | GCAATG | 3 cut(s) | 315, 349, 376 |
| Bse8I | GATNNNNATC | 1 cut(s) | 1526 |
| BseAI | TCCGGA | 2 cut(s) | 358, 1286 |
| BseBI | CCWGG | 3 cut(s) | 421, 534, 897 |
| BseCI | ATCGAT | 1 cut(s) | 222 |
| BseDI | CCNNGG | 8 cut(s) | 320, 419, 532, 842, 896, 965, 1565, 1591 |
| BseGI | GGATG | 5 cut(s) | 262, 797, 1705, 1740, 1774 |
| BseJI | GATNNNNATC | 1 cut(s) | 1526 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 361, 511, 539 |
| BseMI | GCAATG | 3 cut(s) | 315, 349, 376 |
| BseMII | CTCAG | 5 cut(s) | 33, 54, 1029, 1389, 1473 |
| BseNI | ACTGG | 6 cut(s) | 503, 633, 640, 651, 1544, 1820 |
| BseRI | GAGGAG | 3 cut(s) | 986, 995, 1325 |
| BseSI | GKGCMC | 1 cut(s) | 1473 |
| BseXI | GCAGC | 5 cut(s) | 774, 970, 1198, 1414, 1442 |
| BseYI | CCCAGC | 3 cut(s) | 212, 1023, 1495 |
| BsgI | GTGCAG | 1 cut(s) | 609 |
| BshFI | GGCC | 4 cut(s) | 424, 895, 1304, 1666 |
| BshNI | GGYRCC | 1 cut(s) | 1673 |
| BshVI | ATCGAT | 1 cut(s) | 222 |
| BsiHKAI | GWGCWC | 1 cut(s) | 41 |
| BsiSI | CCGG | 2 cut(s) | 359, 1287 |
| BslFI | GGGAC | 3 cut(s) | 338, 625, 1758 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 361, 511, 539 |
| BsmAI | GTCTC | 2 cut(s) | 340, 1086 |
| BsmFI | GGGAC | 3 cut(s) | 338, 625, 1758 |
| BsmI | GAATGC | 2 cut(s) | 460, 1411 |
| BsnI | GGCC | 4 cut(s) | 424, 895, 1304, 1666 |
| Bsp1286I | GDGCHC | 2 cut(s) | 41, 1473 |
| Bsp13I | TCCGGA | 2 cut(s) | 358, 1286 |
| Bsp143I | GATC | 4 cut(s) | 295, 501, 577, 996 |
| Bsp19I | CCATGG | 2 cut(s) | 842, 1591 |
| BspACI | CCGC | 1 cut(s) | 1663 |
| BspANI | GGCC | 4 cut(s) | 424, 895, 1304, 1666 |
| BspCNI | CTCAG | 5 cut(s) | 32, 53, 1030, 1388, 1474 |
| BspDI | ATCGAT | 1 cut(s) | 222 |
| BspEI | TCCGGA | 2 cut(s) | 358, 1286 |
| BspHI | TCATGA | 2 cut(s) | 1458, 1534 |
| BspLI | GGNNCC | 5 cut(s) | 503, 530, 1230, 1675, 1774 |
| BspMAI | CTGCAG | 2 cut(s) | 760, 1432 |
| BspMI | ACCTGC | 1 cut(s) | 1814 |
| BspPI | GGATC | 2 cut(s) | 496, 509 |
| BspT107I | GGYRCC | 1 cut(s) | 1673 |
| BsrDI | GCAATG | 3 cut(s) | 315, 349, 376 |
| BsrI | ACTGG | 6 cut(s) | 503, 633, 640, 651, 1544, 1820 |
| BssECI | CCNNGG | 8 cut(s) | 320, 419, 532, 842, 896, 965, 1565, 1591 |
| BssMI | GATC | 4 cut(s) | 295, 501, 577, 996 |
| BssT1I | CCWWGG | 4 cut(s) | 320, 842, 1565, 1591 |
| Bst2UI | CCWGG | 3 cut(s) | 421, 534, 897 |
| Bst4CI | ACNGT | 4 cut(s) | 478, 549, 616, 824 |
| Bst6I | CTCTTC | 2 cut(s) | 360, 1061 |
| BstC8I | GCNNGC | 3 cut(s) | 306, 585, 1171 |
| BstDEI | CTNAG | 7 cut(s) | 19, 40, 147, 890, 1038, 1375, 1482 |
| BstDSI | CCRYGG | 2 cut(s) | 842, 1591 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 537 |
| BstF5I | GGATG | 5 cut(s) | 262, 797, 1705, 1740, 1774 |
| BstH2I | RGCGCY | 1 cut(s) | 395 |
| BstHHI | GCGC | 1 cut(s) | 394 |
| BstKTI | GATC | 4 cut(s) | 298, 504, 580, 999 |
| BstMAI | GTCTC | 2 cut(s) | 340, 1086 |
| BstMBI | GATC | 4 cut(s) | 295, 501, 577, 996 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 209, 1208 |
| BstNI | CCWGG | 3 cut(s) | 421, 534, 897 |
| BstNSI | RCATGY | 2 cut(s) | 1173, 1340 |
| BstSCI | CCNGG | 3 cut(s) | 419, 532, 895 |
| BstSFI | CTRYAG | 2 cut(s) | 756, 1428 |
| BstSLI | GKGCMC | 1 cut(s) | 1473 |
| BstV1I | GCAGC | 5 cut(s) | 774, 970, 1198, 1414, 1442 |
| BstV2I | GAAGAC | 1 cut(s) | 1638 |
| BstX2I | RGATCY | 1 cut(s) | 501 |
| BstXI | CCANNNNNNTGG | 5 cut(s) | 203, 420, 933, 1452, 1769 |
| BstYI | RGATCY | 1 cut(s) | 501 |
| Bsu15I | ATCGAT | 1 cut(s) | 222 |
| BsuI | GTATCC | 1 cut(s) | 1738 |
| BsuRI | GGCC | 4 cut(s) | 424, 895, 1304, 1666 |
| BsuTUI | ATCGAT | 1 cut(s) | 222 |
| BtgI | CCRYGG | 2 cut(s) | 842, 1591 |
| BtsCI | GGATG | 5 cut(s) | 262, 797, 1705, 1740, 1774 |
| BtsIMutI | CAGTG | 4 cut(s) | 273, 626, 633, 820 |
| BveI | ACCTGC | 1 cut(s) | 1814 |
| Cac8I | GCNNGC | 3 cut(s) | 306, 585, 1171 |
| CciI | TCATGA | 2 cut(s) | 1458, 1534 |
| CfoI | GCGC | 1 cut(s) | 394 |
| Cfr13I | GGNCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| ClaI | ATCGAT | 1 cut(s) | 222 |
| CseI | GACGC | 1 cut(s) | 950 |
| Csp6I | GTAC | 6 cut(s) | 44, 443, 664, 1256, 1609, 1813 |
| CviQI | GTAC | 6 cut(s) | 44, 443, 664, 1256, 1609, 1813 |
| DdeI | CTNAG | 7 cut(s) | 19, 40, 147, 890, 1038, 1375, 1482 |
| DpnI | GATC | 4 cut(s) | 297, 503, 579, 998 |
| DpnII | GATC | 4 cut(s) | 295, 501, 577, 996 |
| EaeI | YGGCCR | 2 cut(s) | 422, 1664 |
| Eam1104I | CTCTTC | 2 cut(s) | 360, 1061 |
| EarI | CTCTTC | 2 cut(s) | 360, 1061 |
| Ecl136II | GAGCTC | 1 cut(s) | 39 |
| Eco130I | CCWWGG | 4 cut(s) | 320, 842, 1565, 1591 |
| Eco147I | AGGCCT | 2 cut(s) | 895, 1304 |
| Eco24I | GRGCYC | 1 cut(s) | 41 |
| Eco47I | GGWCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| Eco53kI | GAGCTC | 1 cut(s) | 39 |
| EcoICRI | GAGCTC | 1 cut(s) | 39 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 537 |
| EcoO109I | RGGNCCY | 1 cut(s) | 920 |
| EcoRII | CCWGG | 3 cut(s) | 419, 532, 895 |
| EcoT14I | CCWWGG | 4 cut(s) | 320, 842, 1565, 1591 |
| EcoT22I | ATGCAT | 2 cut(s) | 1175, 1348 |
| EcoT38I | GRGCYC | 1 cut(s) | 41 |
| ErhI | CCWWGG | 4 cut(s) | 320, 842, 1565, 1591 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1623, 1655 |
| FaqI | GGGAC | 3 cut(s) | 338, 625, 1758 |
| FauNDI | CATATG | 2 cut(s) | 448, 1573 |
| FbaI | TGATCA | 1 cut(s) | 577 |
| Fnu4HI | GCNGC | 6 cut(s) | 788, 959, 1212, 1428, 1431, 1664 |
| FokI | GGATG | 5 cut(s) | 249, 784, 1712, 1747, 1781 |
| FriOI | GRGCYC | 1 cut(s) | 41 |
| Fsp4HI | GCNGC | 6 cut(s) | 788, 959, 1212, 1428, 1431, 1664 |
| FspBI | CTAG | 3 cut(s) | 33, 1263, 1272 |
| GlaI | GCGC | 1 cut(s) | 393 |
| GluI | GCNGC | 6 cut(s) | 788, 959, 1212, 1428, 1431, 1664 |
| GsaI | CCCAGC | 3 cut(s) | 216, 1027, 1499 |
| GsuI | CTGGAG | 1 cut(s) | 1247 |
| HaeII | RGCGCY | 1 cut(s) | 395 |
| HaeIII | GGCC | 4 cut(s) | 424, 895, 1304, 1666 |
| HapII | CCGG | 2 cut(s) | 359, 1287 |
| HgaI | GACGC | 1 cut(s) | 950 |
| HhaI | GCGC | 1 cut(s) | 394 |
| Hin6I | GCGC | 1 cut(s) | 392 |
| HinP1I | GCGC | 1 cut(s) | 392 |
| HincII | GTYRAC | 1 cut(s) | 880 |
| HindII | GTYRAC | 1 cut(s) | 880 |
| HpaII | CCGG | 2 cut(s) | 359, 1287 |
| HphI | GGTGA | 3 cut(s) | 218, 1058, 1726 |
| Hpy166II | GTNNAC | 2 cut(s) | 880, 1759 |
| Hpy188I | TCNGA | 8 cut(s) | 9, 22, 30, 232, 300, 966, 1039, 1132 |
| Hpy8I | GTNNAC | 2 cut(s) | 880, 1759 |
| Hpy99I | CGWCG | 1 cut(s) | 1682 |
| HpyAV | CCTTC | 6 cut(s) | 112, 1036, 1374, 1541, 1664, 1783 |
| HpyCH4III | ACNGT | 4 cut(s) | 478, 549, 616, 824 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 209, 1208 |
| HpyF3I | CTNAG | 7 cut(s) | 19, 40, 147, 890, 1038, 1375, 1482 |
| HspAI | GCGC | 1 cut(s) | 392 |
| Kpn2I | TCCGGA | 2 cut(s) | 358, 1286 |
| Ksp22I | TGATCA | 1 cut(s) | 577 |
| Kzo9I | GATC | 4 cut(s) | 295, 501, 577, 996 |
| LmnI | GCTCC | 5 cut(s) | 36, 973, 1208, 1222, 1228 |
| Lsp1109I | GCAGC | 5 cut(s) | 774, 970, 1198, 1414, 1442 |
| LweI | GCATC | 1 cut(s) | 1132 |
| MaeI | CTAG | 3 cut(s) | 33, 1263, 1272 |
| MaeIII | GTNAC | 4 cut(s) | 269, 372, 406, 434 |
| MalI | GATC | 4 cut(s) | 297, 503, 579, 998 |
| MboI | GATC | 4 cut(s) | 295, 501, 577, 996 |
| MboII | GAAGA | 8 cut(s) | 377, 1013, 1042, 1078, 1342, 1643, 1729, 1732 |
| MfeI | CAATTG | 1 cut(s) | 931 |
| MflI | RGATCY | 1 cut(s) | 501 |
| MhlI | GDGCHC | 2 cut(s) | 41, 1473 |
| MlsI | TGGCCA | 1 cut(s) | 424 |
| MluCI | AATT | 8 cut(s) | 334, 731, 931, 943, 1364, 1368, 1448, 1656 |
| MluNI | TGGCCA | 1 cut(s) | 424 |
| MlyI | GAGTC | 2 cut(s) | 1100, 1367 |
| MmeI | TCCRAC | 2 cut(s) | 8, 1708 |
| Mox20I | TGGCCA | 1 cut(s) | 424 |
| Mph1103I | ATGCAT | 2 cut(s) | 1175, 1348 |
| MroI | TCCGGA | 2 cut(s) | 358, 1286 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1635 |
| MscI | TGGCCA | 1 cut(s) | 424 |
| MseI | TTAA | 3 cut(s) | 182, 1367, 1710 |
| MslI | CAYNNNNRTG | 4 cut(s) | 204, 1341, 1590, 1767 |
| Msp20I | TGGCCA | 1 cut(s) | 424 |
| MspI | CCGG | 2 cut(s) | 359, 1287 |
| MspR9I | CCNGG | 3 cut(s) | 421, 534, 897 |
| MunI | CAATTG | 1 cut(s) | 931 |
| Mva1269I | GAATGC | 2 cut(s) | 460, 1411 |
| MvaI | CCWGG | 3 cut(s) | 421, 534, 897 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 209, 1208 |
| NcoI | CCATGG | 2 cut(s) | 842, 1591 |
| NdeI | CATATG | 2 cut(s) | 448, 1573 |
| NdeII | GATC | 4 cut(s) | 295, 501, 577, 996 |
| NlaIV | GGNNCC | 5 cut(s) | 503, 530, 1230, 1675, 1774 |
| NmuCI | GTSAC | 1 cut(s) | 434 |
| NsiI | ATGCAT | 2 cut(s) | 1175, 1348 |
| NspI | RCATGY | 2 cut(s) | 1173, 1340 |
| PaeI | GCATGC | 1 cut(s) | 1173 |
| PagI | TCATGA | 2 cut(s) | 1458, 1534 |
| PaqCI | CACCTGC | 1 cut(s) | 1814 |
| PceI | AGGCCT | 2 cut(s) | 895, 1304 |
| PctI | GAATGC | 2 cut(s) | 460, 1411 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1635 |
| PkrI | GCNGC | 6 cut(s) | 789, 960, 1213, 1429, 1432, 1665 |
| PleI | GAGTC | 2 cut(s) | 1100, 1367 |
| PpsI | GAGTC | 2 cut(s) | 1100, 1367 |
| PpuMI | RGGWCCY | 1 cut(s) | 920 |
| PshBI | ATTAAT | 1 cut(s) | 1367 |
| Psp124BI | GAGCTC | 1 cut(s) | 41 |
| Psp5II | RGGWCCY | 1 cut(s) | 920 |
| Psp6I | CCWGG | 3 cut(s) | 419, 532, 895 |
| PspFI | CCCAGC | 3 cut(s) | 212, 1023, 1495 |
| PspGI | CCWGG | 3 cut(s) | 419, 532, 895 |
| PspN4I | GGNNCC | 5 cut(s) | 503, 530, 1230, 1675, 1774 |
| PspPI | GGNCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| PspPPI | RGGWCCY | 1 cut(s) | 920 |
| PstI | CTGCAG | 2 cut(s) | 760, 1432 |
| PsuI | RGATCY | 1 cut(s) | 501 |
| RsaI | GTAC | 6 cut(s) | 45, 444, 665, 1257, 1610, 1814 |
| RsaNI | GTAC | 6 cut(s) | 44, 443, 664, 1256, 1609, 1813 |
| RseI | CAYNNNNRTG | 4 cut(s) | 204, 1341, 1590, 1767 |
| SacI | GAGCTC | 1 cut(s) | 41 |
| SaqAI | TTAA | 3 cut(s) | 182, 1367, 1710 |
| SatI | GCNGC | 6 cut(s) | 788, 959, 1212, 1428, 1431, 1664 |
| Sau3AI | GATC | 4 cut(s) | 295, 501, 577, 996 |
| Sau96I | GGNCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| ScaI | AGTACT | 1 cut(s) | 1814 |
| SchI | GAGTC | 2 cut(s) | 1100, 1367 |
| ScrFI | CCNGG | 3 cut(s) | 421, 534, 897 |
| SduI | GDGCHC | 2 cut(s) | 41, 1473 |
| SfaNI | GCATC | 1 cut(s) | 1132 |
| SfcI | CTRYAG | 2 cut(s) | 756, 1428 |
| SinI | GGWCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 204, 1341, 1590, 1767 |
| SmlI | CTYRAG | 2 cut(s) | 555, 977 |
| SmoI | CTYRAG | 2 cut(s) | 555, 977 |
| SphI | GCATGC | 1 cut(s) | 1173 |
| Sse9I | AATT | 8 cut(s) | 334, 731, 931, 943, 1364, 1368, 1448, 1656 |
| SseBI | AGGCCT | 2 cut(s) | 895, 1304 |
| SsiI | CCGC | 1 cut(s) | 1663 |
| SspI | AATATT | 1 cut(s) | 51 |
| SspMI | CTAG | 3 cut(s) | 33, 1263, 1272 |
| SstI | GAGCTC | 1 cut(s) | 41 |
| StuI | AGGCCT | 2 cut(s) | 895, 1304 |
| StyD4I | CCNGG | 3 cut(s) | 419, 532, 895 |
| StyI | CCWWGG | 4 cut(s) | 320, 842, 1565, 1591 |
| TaaI | ACNGT | 4 cut(s) | 478, 549, 616, 824 |
| TaqI | TCGA | 4 cut(s) | 222, 236, 340, 999 |
| TaqII | GACCGA | 2 cut(s) | 897, 1668 |
| TasI | AATT | 8 cut(s) | 334, 731, 931, 943, 1364, 1368, 1448, 1656 |
| TatI | WGTACW | 2 cut(s) | 43, 1812 |
| TauI | GCSGC | 1 cut(s) | 1666 |
| Tru1I | TTAA | 3 cut(s) | 182, 1367, 1710 |
| Tru9I | TTAA | 3 cut(s) | 182, 1367, 1710 |
| TscAI | CASTG | 4 cut(s) | 280, 633, 640, 827 |
| TseFI | GTSAC | 1 cut(s) | 434 |
| TseI | GCWGC | 5 cut(s) | 787, 958, 1211, 1427, 1430 |
| Tsp45I | GTSAC | 1 cut(s) | 434 |
| TspDTI | ATGAA | 8 cut(s) | 240, 347, 1074, 1149, 1418, 1475, 1574, 1707 |
| TspGWI | ACGGA | 1 cut(s) | 1676 |
| TspRI | CASTG | 4 cut(s) | 280, 633, 640, 827 |
| VpaK11BI | GGWCC | 5 cut(s) | 727, 920, 1651, 1759, 1772 |
| VspI | ATTAAT | 1 cut(s) | 1367 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 537 |
| XapI | RAATTY | 1 cut(s) | 1656 |
| XceI | RCATGY | 2 cut(s) | 1173, 1340 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1635 |
| XspI | CTAG | 3 cut(s) | 33, 1263, 1272 |
| ZrmI | AGTACT | 1 cut(s) | 1814 |
| Zsp2I | ATGCAT | 2 cut(s) | 1175, 1348 |