Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0002417

Physical Location & Seq

Genomic Coordinates Reverse (-)

21108541 .. 21111120

Gene Structure 2580 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g17040.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1791 bp

ATGTCAATTGTCATTGTAGCTGGCCTGTGTTGTTTCTTTTACATATTGGGTGCGTGGCAGCGAAGTGGTTTTGGGAAGGGAGATAGCATAGCTGTGGAGATTACCAGACAGACAGACTGCAGTATCCTATCCAATCTGAATTATGAGACCCATCGTGGTGGGATTGACAATTCTGAAGGAGTTGGCAAGGAGTTCAAATCATGCGGCGATCGCTATATTGATTACACTCCCTGCCAAGATCAAATGCGAGCAATGACTTTCCCCCGAGAAAATATGAATTACAGGGAAAGACATTGTCCGCCTGAAGAAGAGAAGCTACATTGCCTTATTCCGGCACCCAAAGGCTATGTGACTCCATTTCGATGGCCCCAAAGCCGTGACTATGTACCTTATGCCAATGCTCCCTATAAAAGCCTGACAGTTGAGAAGGCTGTTCAGAACTGGATTCAGTACGAGGGCAACGTGTTTAGGTTTCCTGGTGGTGGAACACAGTTTCCTCATGGAGCAGATGCATATATCAATGAACTTGCAGCTGTGATCCCAATGGACAATGGGATGGTTAGAACTGCATTGGACACTGGATGTGGGGTTGCCAGCTGGGGTGCCTACCTATTTAAGAAAAATGTTATAGCAATGTCATTCGCGCCAAGAGACTCTCATGAAGCACAAGTTCAATTTGCTCTGGAAAGAGGTGTTCCGGCAGTTATTGGCGTCCTCGGAACTATAAAGCTGCCTTACTCTTCTAGGGCCTTTGACATGGCTCACTGCTCTCGTTGCCTGATACCGTGGGGTGCAAATGATGGAATGTACATGATGGAAGTTGACCGGGTTCTAAGACCTGGTGGTTATTGGGTGCTTTCGGGTCCTCCTATTAACTGGAGGAATAATTATGTAGCGTGGCAGCGCCCTAAAGAAGAACTTGAGGAAGAACAGAGGAAGATTGAAGAGGTTGCGAAACTTCTCAACTGGGAAAAGAAGTATGAGAAGGGTGAAATTGCCATCTGGAGGAAACTAACAACTTCTGAGTATCGTCGTGACCAAGATCCCCAACCGAATATGTGTGAATCCAATAATGCCGATGATGTTTGGTACCAGAAGATGGAGTTGTGTGTAACTCCTTATCCTGAGACTTCTGATGCCAATGAGGATGCTGGTGGGCCATGGAAGCCATTCCCGGAGAGGCTTAATGCTTTACCTTTCAGAATATCTAGTGATTCTGTGCCGGATGTATCTGCTGAGACATTCCAGGAGGACAATAAGGCATGGAAGAAACACGTAAATGCTTATAAGAGGACTAACAAGTTAATGGATACAGGAAGGTACCGCAACATTATGGATATGAATGCCGGTCTGGGAAGTTTTGCTGCTGCTCTCGACTCTCCTAAATTGTGGGTTATGAATGTTATGCCTACAATAGCTCAGAAAGACACATTGGGAGTTATATTTGAACGTGGATTGATTGGCATTTACCATGATTGGTGTGAAGCCTTCTCCACGTATCCAAGGACATATGACCTTATTCACGCAAACGGTGTTTTCAGCTTGTACAAGGACAAGTGCAATGCTGAAGACATTCTTTTGGAGATGGATCGCATTCTACGGCCCGAAGGAGCAGTGATATTTCGTGATCACATGGATGTGCTAGTCAAGGTGAGCAAACTTGTGAGAGGAATGAGATGGAACACGAAAATGGTGGACCATGAAGACGGCCCTCTTGTTCCTGAAAAGGTATTGTTTGCGGTTAAACGGTACTGGGTTGCCGGTGAAGACAAAGCTACAACGTCGGAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005768 GO:0005794 GO:0005802 GO:0008150 GO:0008152 GO:0008168 GO:0008757 GO:0012505 GO:0016020 GO:0016740 GO:0016741 GO:0031410 GO:0031982 GO:0031984 GO:0032259 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044431 GO:0044444 GO:0044446 GO:0044464 GO:0097708 GO:0098791

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Methyltransf_29

Protein Analysis

597

Amino Acids

67.99

Weight (kDa)

5.89

Isoelectric Point (pI)

37.34

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002417)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G26850 AT1G26850 AT1G26850
fragaria_vesca	FvH4_4g31440 FvH4_4g31440 FvH4_4g31440 FvH4_5g15080
malus_domestica	MD06G1192300.v1.1 MD13G1072700.v1.1 MD14G1198900.v1.1 MD16G1073500.v1.1
prunus_persica	Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.1G273400_v2.0.a1 Prupe.5G192000_v2.0.a1 Prupe.5G192000_v2.0.a1
pyrus_communis	pycom06g17040 pycom13g06520 pycom14g16510 pycom16g06360
rosa_chinensis	RchiOBHm_Chr4g0439921 RchiOBHm_Chr7g0181131
rosa_laevigata	RLG00000005211 RLG00000006225
rosa_multiflora	Rmu_sc0001147.1_g000019 Rmu_sc0022459.1_g000002
rosa_roxburghii	Rroxscaffold_3G00272250 Rroxscaffold_5G00380870
rosa_rugosa	Rorug04G0322400 Rorug04G0322500 Rorug06G0438700
rosa_samantha	Rh4AG373400 Rh4BG385700 Rh4CG400200 Rh4DG380000 Rh7AG040600 Rh7BG040000 Rh7CG042000 Rh7DG040400
rosa_wichuraiana	Rw4G031930 Rw7G003350

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1287
Acc65I	GGTACC	2 cut(s)	1089, 1320
AccB1I	GGYRCC	4 cut(s)	334, 602, 1089, 1320
AccB7I	CCANNNNNTGG	1 cut(s)	1099
AccII	CGCG	1 cut(s)	644
AciI	CCGC	4 cut(s)	204, 299, 1324, 1739
AclWI	GGATC	3 cut(s)	532, 1037, 1596
AcuI	CTGAAG	3 cut(s)	195, 324, 1587
AcyI	GRCGYC	1 cut(s)	711
AfaI	GTAC	7 cut(s)	387, 452, 809, 1091, 1322, 1547, 1751
AfiI	CCNNNNNNNGG	4 cut(s)	331, 482, 1005, 1099
AflIII	ACRYGT	2 cut(s)	462, 1273
AgsI	TTSAA	4 cut(s)	196, 674, 944, 1448
AjnI	CCWGG	3 cut(s)	475, 838, 1245
AjuI	GAANNNNNNNTTGG	2 cut(s)	1415, 1447
AloI	GAACNNNNNNTCC	2 cut(s)	478, 510
AluBI	AGCT	9 cut(s)	20, 92, 316, 533, 597, 730, 1418, 1542, 1775
AluI	AGCT	9 cut(s)	20, 92, 316, 533, 597, 730, 1418, 1542, 1775
Alw26I	GTCTC	4 cut(s)	140, 645, 1121, 1232
AlwI	GGATC	3 cut(s)	532, 1037, 1596
Ama87I	CYCGRG	1 cut(s)	264
AoxI	GGCC	6 cut(s)	22, 365, 747, 1157, 1601, 1708
ApeKI	GCWGC	6 cut(s)	58, 530, 730, 901, 1364, 1367
AsiSI	GCGATCGC	1 cut(s)	211
Asp700I	GAANNNNTTC	2 cut(s)	1169, 1572
Asp718I	GGTACC	2 cut(s)	1089, 1320
AspLEI	GCGC	2 cut(s)	646, 906
AspS9I	GGNCC	7 cut(s)	366, 747, 863, 1157, 1602, 1696, 1709
AsuC2I	CCSGG	2 cut(s)	827, 1175
AsuHPI	GGTGA	3 cut(s)	1001, 1663, 1775
AvaI	CYCGRG	1 cut(s)	264
AvaII	GGWCC	2 cut(s)	863, 1696
BaeI	ACNNNNGTAYC	2 cut(s)	106, 139
BanI	GGYRCC	4 cut(s)	334, 602, 1089, 1320
BarI	GAAGNNNNNNTAC	2 cut(s)	300, 332
BbsI	GAAGAC	3 cut(s)	1575, 1710, 1773
BbvI	GCAGC	6 cut(s)	70, 542, 717, 913, 1351, 1354
BccI	CCATC	9 cut(s)	159, 357, 550, 794, 808, 1007, 1093, 1579, 1671
BceAI	ACGGC	3 cut(s)	360, 1616, 1723
BciT130I	CCWGG	3 cut(s)	477, 840, 1247
BciVI	GTATCC	3 cut(s)	134, 1303, 1509
BclI	TGATCA	1 cut(s)	1627
BcnI	CCSGG	2 cut(s)	827, 1175
BcoDI	GTCTC	4 cut(s)	140, 645, 1121, 1232
BfaI	CTAG	3 cut(s)	744, 1209, 1643
BfmI	CTRYAG	1 cut(s)	118
BfoI	RGCGCY	1 cut(s)	907
BfuI	GTATCC	3 cut(s)	134, 1303, 1509
BisI	GCNGC	7 cut(s)	59, 205, 531, 731, 902, 1365, 1368
BlsI	GCNGC	7 cut(s)	60, 206, 532, 732, 903, 1366, 1369
Bme1390I	CCNGG	5 cut(s)	477, 827, 840, 1175, 1247
Bme18I	GGWCC	2 cut(s)	863, 1696
BmeT110I	CYCGRG	1 cut(s)	264
BmgT120I	GGNCC	7 cut(s)	366, 747, 863, 1157, 1602, 1696, 1709
BmiI	GGNNCC	6 cut(s)	336, 368, 604, 864, 1091, 1322
BmrFI	CCNGG	5 cut(s)	477, 827, 840, 1175, 1247
BmrI	ACTGGG	2 cut(s)	976, 1762
BmsI	GCATC	3 cut(s)	499, 1126, 1138
BmuI	ACTGGG	2 cut(s)	976, 1762
BpiI	GAAGAC	3 cut(s)	1575, 1710, 1773
BpmI	CTGGAG	2 cut(s)	898, 1024
BpuEI	CTTGAG	1 cut(s)	941
BpuMI	CCSGG	2 cut(s)	827, 1175
BsaAI	YACGTR	2 cut(s)	1276, 1497
BsaHI	GRCGYC	1 cut(s)	711
BsaI	GGTCTC	1 cut(s)	140
BsaJI	CCNNGG	4 cut(s)	715, 785, 1160, 1502
Bsc4I	CCNNNNNNNGG	4 cut(s)	331, 482, 1005, 1099
Bse118I	RCCGGY	2 cut(s)	1346, 1760
Bse1I	ACTGG	5 cut(s)	446, 583, 881, 971, 1757
Bse3DI	GCAATG	4 cut(s)	258, 319, 639, 1567
BseBI	CCWGG	3 cut(s)	477, 840, 1247
BseDI	CCNNGG	4 cut(s)	715, 785, 1160, 1502
BseGI	GGATG	5 cut(s)	561, 587, 1153, 1231, 1642
BseLI	CCNNNNNNNGG	4 cut(s)	331, 482, 1005, 1099
BseMI	GCAATG	4 cut(s)	258, 319, 639, 1567
BseMII	CTCAG	4 cut(s)	1014, 1116, 1227, 1433
BseNI	ACTGG	5 cut(s)	446, 583, 881, 971, 1757
BseXI	GCAGC	6 cut(s)	70, 542, 717, 913, 1351, 1354
BseYI	CCCAGC	1 cut(s)	597
Bsh1236I	CGCG	1 cut(s)	644
Bsh1285I	CGRYCG	1 cut(s)	211
BshFI	GGCC	6 cut(s)	24, 367, 749, 1159, 1603, 1710
BshNI	GGYRCC	4 cut(s)	334, 602, 1089, 1320
BsiEI	CGRYCG	1 cut(s)	211
BsiHKCI	CYCGRG	1 cut(s)	264
BsiSI	CCGG	7 cut(s)	332, 698, 826, 1175, 1223, 1347, 1761
BslI	CCNNNNNNNGG	4 cut(s)	331, 482, 1005, 1099
BsmAI	GTCTC	4 cut(s)	140, 645, 1121, 1232
BsmI	GAATGC	2 cut(s)	1348, 1593
BsnI	GGCC	6 cut(s)	24, 367, 749, 1159, 1603, 1710
Bso31I	GGTCTC	1 cut(s)	140
BsoBI	CYCGRG	1 cut(s)	264
Bsp1407I	TGTACA	2 cut(s)	807, 1545
Bsp143I	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
Bsp19I	CCATGG	1 cut(s)	1160
BspACI	CCGC	4 cut(s)	204, 299, 1324, 1739
BspANI	GGCC	6 cut(s)	24, 367, 749, 1159, 1603, 1710
BspCNI	CTCAG	4 cut(s)	1015, 1117, 1228, 1432
BspFNI	CGCG	1 cut(s)	644
BspHI	TCATGA	1 cut(s)	658
BspLI	GGNNCC	6 cut(s)	336, 368, 604, 864, 1091, 1322
BspMAI	CTGCAG	1 cut(s)	122
BspPI	GGATC	3 cut(s)	532, 1037, 1596
BspT107I	GGYRCC	4 cut(s)	334, 602, 1089, 1320
BspTNI	GGTCTC	1 cut(s)	140
BsrDI	GCAATG	4 cut(s)	258, 319, 639, 1567
BsrFI	RCCGGY	2 cut(s)	1346, 1760
BsrGI	TGTACA	2 cut(s)	807, 1545
BsrI	ACTGG	5 cut(s)	446, 583, 881, 971, 1757
BssAI	RCCGGY	2 cut(s)	1346, 1760
BssECI	CCNNGG	4 cut(s)	715, 785, 1160, 1502
BssMI	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
BssNI	GRCGYC	1 cut(s)	711
BssT1I	CCWWGG	2 cut(s)	1160, 1502
Bst2UI	CCWGG	3 cut(s)	477, 840, 1247
Bst4CI	ACNGT	5 cut(s)	421, 492, 786, 1532, 1749
Bst6I	CTCTTC	3 cut(s)	303, 745, 939
BstACI	GRCGYC	1 cut(s)	711
BstAUI	TGTACA	2 cut(s)	807, 1545
BstBAI	YACGTR	2 cut(s)	1276, 1497
BstC8I	GCNNGC	3 cut(s)	22, 249, 595
BstDEI	CTNAG	5 cut(s)	833, 1023, 1125, 1236, 1419
BstDSI	CCRYGG	2 cut(s)	785, 1160
BstF5I	GGATG	5 cut(s)	561, 587, 1153, 1231, 1642
BstFNI	CGCG	1 cut(s)	644
BstH2I	RGCGCY	1 cut(s)	907
BstHHI	GCGC	2 cut(s)	646, 906
BstKTI	GATC	6 cut(s)	211, 241, 540, 1045, 1591, 1630
BstMAI	GTCTC	4 cut(s)	140, 645, 1121, 1232
BstMBI	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
BstMCI	CGRYCG	1 cut(s)	211
BstMWI	GCNNNNNNNGC	3 cut(s)	210, 774, 1165
BstNI	CCWGG	3 cut(s)	477, 840, 1247
BstSCI	CCNGG	5 cut(s)	475, 825, 838, 1173, 1245
BstSFI	CTRYAG	1 cut(s)	118
BstUI	CGCG	1 cut(s)	644
BstV1I	GCAGC	6 cut(s)	70, 542, 717, 913, 1351, 1354
BstV2I	GAAGAC	3 cut(s)	1575, 1710, 1773
BstX2I	RGATCY	1 cut(s)	1042
BstXI	CCANNNNNNTGG	2 cut(s)	158, 363
BstYI	RGATCY	1 cut(s)	1042
BsuI	GTATCC	3 cut(s)	134, 1303, 1509
BsuRI	GGCC	6 cut(s)	24, 367, 749, 1159, 1603, 1710
BtgI	CCRYGG	2 cut(s)	785, 1160
BtsCI	GGATG	5 cut(s)	561, 587, 1153, 1231, 1642
BtsI	GCAGTG	2 cut(s)	763, 1620
BtsIMutI	CAGTG	3 cut(s)	576, 763, 1620
Cac8I	GCNNGC	3 cut(s)	22, 249, 595
CciI	TCATGA	1 cut(s)	658
CfoI	GCGC	2 cut(s)	646, 906
Cfr10I	RCCGGY	2 cut(s)	1346, 1760
Cfr13I	GGNCC	7 cut(s)	366, 747, 863, 1157, 1602, 1696, 1709
CseI	GACGC	1 cut(s)	700
CsiI	ACCWGGT	1 cut(s)	838
Csp6I	GTAC	7 cut(s)	386, 451, 808, 1090, 1321, 1546, 1750
CviQI	GTAC	7 cut(s)	386, 451, 808, 1090, 1321, 1546, 1750
DdeI	CTNAG	5 cut(s)	833, 1023, 1125, 1236, 1419
DpnI	GATC	6 cut(s)	210, 240, 539, 1044, 1590, 1629
DpnII	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
Eam1104I	CTCTTC	3 cut(s)	303, 745, 939
EarI	CTCTTC	3 cut(s)	303, 745, 939
EciI	GGCGGA	1 cut(s)	288
Eco130I	CCWWGG	2 cut(s)	1160, 1502
Eco31I	GGTCTC	1 cut(s)	140
Eco47I	GGWCC	2 cut(s)	863, 1696
Eco57I	CTGAAG	3 cut(s)	195, 324, 1587
Eco88I	CYCGRG	1 cut(s)	264
EcoO109I	RGGNCCY	2 cut(s)	747, 863
EcoRII	CCWGG	3 cut(s)	475, 838, 1245
EcoT14I	CCWWGG	2 cut(s)	1160, 1502
EcoT22I	ATGCAT	1 cut(s)	514
ErhI	CCWWGG	2 cut(s)	1160, 1502
FalI	AAGNNNNNCTT	4 cut(s)	903, 935, 1560, 1592
FauNDI	CATATG	1 cut(s)	1510
FbaI	TGATCA	1 cut(s)	1627
Fnu4HI	GCNGC	7 cut(s)	59, 205, 531, 731, 902, 1365, 1368
FokI	GGATG	5 cut(s)	568, 594, 1160, 1238, 1649
Fsp4HI	GCNGC	7 cut(s)	59, 205, 531, 731, 902, 1365, 1368
FspBI	CTAG	3 cut(s)	744, 1209, 1643
GlaI	GCGC	2 cut(s)	645, 905
GluI	GCNGC	7 cut(s)	59, 205, 531, 731, 902, 1365, 1368
GsaI	CCCAGC	1 cut(s)	601
GsuI	CTGGAG	2 cut(s)	898, 1024
HaeII	RGCGCY	1 cut(s)	907
HaeIII	GGCC	6 cut(s)	24, 367, 749, 1159, 1603, 1710
HapII	CCGG	7 cut(s)	332, 698, 826, 1175, 1223, 1347, 1761
HgaI	GACGC	1 cut(s)	700
HhaI	GCGC	2 cut(s)	646, 906
Hin1I	GRCGYC	1 cut(s)	711
Hin6I	GCGC	2 cut(s)	644, 904
HinP1I	GCGC	2 cut(s)	644, 904
HincII	GTYRAC	1 cut(s)	823
HindII	GTYRAC	1 cut(s)	823
HinfI	GANTC	6 cut(s)	352, 445, 653, 1064, 1214, 1376
HpaII	CCGG	7 cut(s)	332, 698, 826, 1175, 1223, 1347, 1761
HphI	GGTGA	3 cut(s)	1001, 1663, 1775
Hpy166II	GTNNAC	2 cut(s)	823, 1696
Hpy188I	TCNGA	9 cut(s)	138, 175, 438, 719, 1024, 1135, 1202, 1422, 1786
Hpy188III	TCNNGA	8 cut(s)	659, 683, 1003, 1034, 1124, 1373, 1625, 1721
Hpy8I	GTNNAC	2 cut(s)	823, 1696
Hpy99I	CGWCG	2 cut(s)	1035, 1786
HpyAV	CCTTC	7 cut(s)	70, 170, 421, 979, 1311, 1498, 1601
HpyCH4III	ACNGT	5 cut(s)	421, 492, 786, 1532, 1749
HpyCH4IV	ACGT	5 cut(s)	462, 1275, 1450, 1496, 1781
HpyCH4V	TGCA	6 cut(s)	120, 512, 530, 569, 794, 1560
HpyF10VI	GCNNNNNNNGC	3 cut(s)	210, 774, 1165
HpyF3I	CTNAG	5 cut(s)	833, 1023, 1125, 1236, 1419
HpySE526I	ACGT	5 cut(s)	462, 1275, 1450, 1496, 1781
Hsp92I	GRCGYC	1 cut(s)	711
HspAI	GCGC	2 cut(s)	644, 904
KpnI	GGTACC	2 cut(s)	1093, 1324
Ksp22I	TGATCA	1 cut(s)	1627
Kzo9I	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
LmnI	GCTCC	3 cut(s)	406, 503, 1610
Lsp1109I	GCAGC	6 cut(s)	70, 542, 717, 913, 1351, 1354
LweI	GCATC	3 cut(s)	499, 1126, 1138
MabI	ACCWGGT	1 cut(s)	838
MaeI	CTAG	3 cut(s)	744, 1209, 1643
MaeII	ACGT	5 cut(s)	462, 1275, 1450, 1496, 1781
MaeIII	GTNAC	4 cut(s)	349, 377, 1034, 1111
MalI	GATC	6 cut(s)	210, 240, 539, 1044, 1590, 1629
MboI	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
MfeI	CAATTG	1 cut(s)	6
MflI	RGATCY	1 cut(s)	1042
MluCI	AATT	8 cut(s)	6, 139, 169, 277, 674, 886, 993, 1385
MlyI	GAGTC	3 cut(s)	346, 647, 1370
MmeI	TCCRAC	1 cut(s)	1764
Mph1103I	ATGCAT	1 cut(s)	514
MroXI	GAANNNNTTC	2 cut(s)	1169, 1572
MseI	TTAA	5 cut(s)	615, 873, 1185, 1304, 1743
MslI	CAYNNNNRTG	7 cut(s)	92, 156, 361, 1278, 1635, 1637, 1688
MspA1I	CMGCKG	2 cut(s)	533, 597
MspI	CCGG	7 cut(s)	332, 698, 826, 1175, 1223, 1347, 1761
MspR9I	CCNGG	5 cut(s)	477, 827, 840, 1175, 1247
MunI	CAATTG	1 cut(s)	6
Mva1269I	GAATGC	2 cut(s)	1348, 1593
MvaI	CCWGG	3 cut(s)	477, 840, 1247
MvnI	CGCG	1 cut(s)	644
MwoI	GCNNNNNNNGC	3 cut(s)	210, 774, 1165
NciI	CCSGG	2 cut(s)	827, 1175
NcoI	CCATGG	1 cut(s)	1160
NdeI	CATATG	1 cut(s)	1510
NdeII	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
NlaIV	GGNNCC	6 cut(s)	336, 368, 604, 864, 1091, 1322
NmuCI	GTSAC	3 cut(s)	349, 377, 1034
NsiI	ATGCAT	1 cut(s)	514
PagI	TCATGA	1 cut(s)	658
PcsI	WCGNNNNNNNCGW	1 cut(s)	459
PctI	GAATGC	2 cut(s)	1348, 1593
PdmI	GAANNNNTTC	2 cut(s)	1169, 1572
PfeI	GAWTC	3 cut(s)	445, 1064, 1214
PflFI	GACNNNGTC	1 cut(s)	294
PflMI	CCANNNNNTGG	1 cut(s)	1099
PfoI	TCCNGGA	2 cut(s)	1173, 1245
PkrI	GCNGC	7 cut(s)	60, 206, 532, 732, 903, 1366, 1369
Ple19I	CGATCG	1 cut(s)	211
PleI	GAGTC	3 cut(s)	346, 647, 1370
PpsI	GAGTC	3 cut(s)	346, 647, 1370
Ppu21I	YACGTR	2 cut(s)	1276, 1497
PpuMI	RGGWCCY	1 cut(s)	863
PsiI	TTATAA	1 cut(s)	1287
Psp5II	RGGWCCY	1 cut(s)	863
Psp6I	CCWGG	3 cut(s)	475, 838, 1245
PspFI	CCCAGC	1 cut(s)	597
PspGI	CCWGG	3 cut(s)	475, 838, 1245
PspN4I	GGNNCC	6 cut(s)	336, 368, 604, 864, 1091, 1322
PspPI	GGNCC	7 cut(s)	366, 747, 863, 1157, 1602, 1696, 1709
PspPPI	RGGWCCY	1 cut(s)	863
PstI	CTGCAG	1 cut(s)	122
PsuI	RGATCY	1 cut(s)	1042
PsyI	GACNNNGTC	1 cut(s)	294
PvuI	CGATCG	1 cut(s)	211
PvuII	CAGCTG	2 cut(s)	533, 597
RgaI	GCGATCGC	1 cut(s)	211
RsaI	GTAC	7 cut(s)	387, 452, 809, 1091, 1322, 1547, 1751
RsaNI	GTAC	7 cut(s)	386, 451, 808, 1090, 1321, 1546, 1750
RseI	CAYNNNNRTG	7 cut(s)	92, 156, 361, 1278, 1635, 1637, 1688
SaqAI	TTAA	5 cut(s)	615, 873, 1185, 1304, 1743
SatI	GCNGC	7 cut(s)	59, 205, 531, 731, 902, 1365, 1368
Sau3AI	GATC	6 cut(s)	208, 238, 537, 1042, 1588, 1627
Sau96I	GGNCC	7 cut(s)	366, 747, 863, 1157, 1602, 1696, 1709
SchI	GAGTC	3 cut(s)	346, 647, 1370
ScrFI	CCNGG	5 cut(s)	477, 827, 840, 1175, 1247
SexAI	ACCWGGT	1 cut(s)	838
SfaAI	GCGATCGC	1 cut(s)	211
SfaNI	GCATC	3 cut(s)	499, 1126, 1138
SfcI	CTRYAG	1 cut(s)	118
SgfI	GCGATCGC	1 cut(s)	211
SinI	GGWCC	2 cut(s)	863, 1696
SmiMI	CAYNNNNRTG	7 cut(s)	92, 156, 361, 1278, 1635, 1637, 1688
SmlI	CTYRAG	1 cut(s)	920
SmoI	CTYRAG	1 cut(s)	920
Sse9I	AATT	8 cut(s)	6, 139, 169, 277, 674, 886, 993, 1385
SsiI	CCGC	4 cut(s)	204, 299, 1324, 1739
SspMI	CTAG	3 cut(s)	744, 1209, 1643
StyD4I	CCNGG	5 cut(s)	475, 825, 838, 1173, 1245
StyI	CCWWGG	2 cut(s)	1160, 1502
TaaI	ACNGT	5 cut(s)	421, 492, 786, 1532, 1749
TaiI	ACGT	5 cut(s)	465, 1278, 1453, 1499, 1784
TaqI	TCGA	2 cut(s)	361, 1374
TasI	AATT	8 cut(s)	6, 139, 169, 277, 674, 886, 993, 1385
TatI	WGTACW	2 cut(s)	807, 1545
TauI	GCSGC	1 cut(s)	207
TfiI	GAWTC	3 cut(s)	445, 1064, 1214
Tru1I	TTAA	5 cut(s)	615, 873, 1185, 1304, 1743
Tru9I	TTAA	5 cut(s)	615, 873, 1185, 1304, 1743
TscAI	CASTG	3 cut(s)	583, 770, 1620
TseFI	GTSAC	3 cut(s)	349, 377, 1034
TseI	GCWGC	6 cut(s)	58, 530, 730, 901, 1364, 1367
Tsp45I	GTSAC	3 cut(s)	349, 377, 1034
TspDTI	ATGAA	6 cut(s)	290, 537, 675, 1355, 1412, 1716
TspRI	CASTG	3 cut(s)	583, 770, 1620
Tth111I	GACNNNGTC	1 cut(s)	294
Van91I	CCANNNNNTGG	1 cut(s)	1099
VpaK11BI	GGWCC	2 cut(s)	863, 1696
XmnI	GAANNNNTTC	2 cut(s)	1169, 1572
XspI	CTAG	3 cut(s)	744, 1209, 1643
Zsp2I	ATGCAT	1 cut(s)	514

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.